Articles | Volume 15, issue 17
https://doi.org/10.5194/gmd-15-6695-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-15-6695-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Methods for assessment of models
| 
05 Sep 2022
Methods for assessment of models |
| 05 Sep 2022
| 05 Sep 2022
Characterizing uncertainties of Earth system modeling with heterogeneous many-core architecture computing
Yangyang Yu
Key Laboratory of Physical Oceanography, Ministry of Education/Institute for Advanced Ocean Study/Frontiers Science Center for Deep Ocean Multispheres and Earth System (DOMES), Ocean University of China, Qingdao
266100, China
College of Oceanic and Atmospheric Sciences, Ocean University of
China, Qingdao 266100, China
Shaoqing Zhang
CORRESPONDING AUTHOR
Key Laboratory of Physical Oceanography, Ministry of Education/Institute for Advanced Ocean Study/Frontiers Science Center for Deep Ocean Multispheres and Earth System (DOMES), Ocean University of China, Qingdao
266100, China
College of Oceanic and Atmospheric Sciences, Ocean University of
China, Qingdao 266100, China
Pilot National Laboratory for Marine Science and Technology, Qingdao 266100, China
Haohuan Fu
CORRESPONDING AUTHOR
Ministry of Education Key Laboratory for Earth System Modeling/Department of Earth System Science, Tsinghua University, Beijing 100084,
China
National Supercomputing Center in Wuxi, Wuxi 214072, China
Lixin Wu
CORRESPONDING AUTHOR
Key Laboratory of Physical Oceanography, Ministry of Education/Institute for Advanced Ocean Study/Frontiers Science Center for Deep Ocean Multispheres and Earth System (DOMES), Ocean University of China, Qingdao
266100, China
College of Oceanic and Atmospheric Sciences, Ocean University of
China, Qingdao 266100, China
Pilot National Laboratory for Marine Science and Technology, Qingdao 266100, China
Dexun Chen
CORRESPONDING AUTHOR
National Supercomputing Center in Wuxi, Wuxi 214072, China
Pilot National Laboratory for Marine Science and Technology, Qingdao 266100, China
Key Laboratory of Marine Environmental Science and Ecology, Ministry of Education/Frontiers Science Center for Deep
Ocean Multispheres and Earth System (DOMES), Ocean University of China, Qingdao 266100, China
Zhiqiang Wei
Pilot National Laboratory for Marine Science and Technology, Qingdao 266100, China
Dongning Jia
Pilot National Laboratory for Marine Science and Technology, Qingdao 266100, China
Xiaopei Lin
Key Laboratory of Physical Oceanography, Ministry of Education/Institute for Advanced Ocean Study/Frontiers Science Center for Deep Ocean Multispheres and Earth System (DOMES), Ocean University of China, Qingdao
266100, China
College of Oceanic and Atmospheric Sciences, Ocean University of
China, Qingdao 266100, China
Pilot National Laboratory for Marine Science and Technology, Qingdao 266100, China
Related authors
Yangyang Yu, Shaoqing Zhang, Haohuan Fu, Dexun Chen, Yang Gao, Xiaopei Lin, Zhao Liu, and Xiaojing Lv
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-10, https://doi.org/10.5194/gmd-2024-10, 2024
Preprint withdrawn
Short summary
Short summary
The hardware-related perturbations caused by the heterogeneous many-core architectures can blend with software or human errors, which can affect the accuracy of the model consistency verification. We develop a deep learning-based consistency test tool for ESMs on the heterogeneous systems (ESM-DCT) and evaluate it in CESM on new Sunway system. The ESM-DCT can detect the existence of software or human errors when taking hardware-related perturbations into account.
Zhenming Wang, Shaoqing Zhang, Yishuai Jin, Yinglai Jia, Yangyang Yu, Yang Gao, Xiaolin Yu, Mingkui Li, Xiaopei Lin, and Lixin Wu
Geosci. Model Dev., 16, 705–717, https://doi.org/10.5194/gmd-16-705-2023, https://doi.org/10.5194/gmd-16-705-2023, 2023
Short summary
Short summary
To improve the numerical model predictability of monthly extended-range scales, we use the simplified slab ocean model (SOM) to restrict the complicated sea surface temperature (SST) bias from a 3-D dynamical ocean model. As for SST prediction, whether in space or time, the WRF-SOM is verified to have better performance than the WRF-ROMS, which has a significant impact on the atmosphere. For extreme weather events such as typhoons, the predictions of WRF-SOM are in good agreement with WRF-ROMS.
Shaoqing Zhang, Haohuan Fu, Lixin Wu, Yuxuan Li, Hong Wang, Yunhui Zeng, Xiaohui Duan, Wubing Wan, Li Wang, Yuan Zhuang, Hongsong Meng, Kai Xu, Ping Xu, Lin Gan, Zhao Liu, Sihai Wu, Yuhu Chen, Haining Yu, Shupeng Shi, Lanning Wang, Shiming Xu, Wei Xue, Weiguo Liu, Qiang Guo, Jie Zhang, Guanghui Zhu, Yang Tu, Jim Edwards, Allison Baker, Jianlin Yong, Man Yuan, Yangyang Yu, Qiuying Zhang, Zedong Liu, Mingkui Li, Dongning Jia, Guangwen Yang, Zhiqiang Wei, Jingshan Pan, Ping Chang, Gokhan Danabasoglu, Stephen Yeager, Nan Rosenbloom, and Ying Guo
Geosci. Model Dev., 13, 4809–4829, https://doi.org/10.5194/gmd-13-4809-2020, https://doi.org/10.5194/gmd-13-4809-2020, 2020
Short summary
Short summary
Science advancement and societal needs require Earth system modelling with higher resolutions that demand tremendous computing power. We successfully scale the 10 km ocean and 25 km atmosphere high-resolution Earth system model to a new leading-edge heterogeneous supercomputer using state-of-the-art optimizing methods, promising the solution of high spatial resolution and time-varying frequency. Corresponding technical breakthroughs are of significance in modelling and HPC design communities.
Jiewen Shen, Bin Zhao, Shuxiao Wang, An Ning, Yuyang Li, Runlong Cai, Da Gao, Biwu Chu, Yang Gao, Manish Shrivastava, Jingkun Jiang, Xiuhui Zhang, and Hong He
Atmos. Chem. Phys., 24, 10261–10278, https://doi.org/10.5194/acp-24-10261-2024, https://doi.org/10.5194/acp-24-10261-2024, 2024
Short summary
Short summary
We extensively compare various cluster-dynamics-based parameterizations for sulfuric acid–dimethylamine nucleation and identify a newly developed parameterization derived from Atmospheric Cluster Dynamic Code (ACDC) simulations as being the most reliable one. This study offers a valuable reference for developing parameterizations of other nucleation systems and is meaningful for the accurate quantification of the environmental and climate impacts of new particle formation.
Wenbin Kou, Yang Gao, Dan Tong, Xiaojie Guo, Xiadong An, Wenyu Liu, Mengshi Cui, Xiuwen Guo, Shaoqing Zhang, Huiwang Gao, and Lixin Wu
EGUsphere, https://doi.org/10.5194/egusphere-2024-2500, https://doi.org/10.5194/egusphere-2024-2500, 2024
Short summary
Short summary
Unlike traditional numerical studies, we apply a high-resolution Earth system model, improving simulations of ozone and large-scale circulations such as atmospheric blocking. In addition to local heatwave effects, we quantify the impact of atmospheric blocking on downstream ozone concentrations, which is closely associated with the blocking position. We identify three major pathways of Rossby wave propagation, stressing the critical role of large-scale circulation play in regional air quality.
Lijing Cheng, Yuying Pan, Zhetao Tan, Huayi Zheng, Yujing Zhu, Wangxu Wei, Juan Du, Huifeng Yuan, Guancheng Li, Hanlin Ye, Viktor Gouretski, Yuanlong Li, Kevin E. Trenberth, John Abraham, Yuchun Jin, Franco Reseghetti, Xiaopei Lin, Bin Zhang, Gengxin Chen, Michael E. Mann, and Jiang Zhu
Earth Syst. Sci. Data, 16, 3517–3546, https://doi.org/10.5194/essd-16-3517-2024, https://doi.org/10.5194/essd-16-3517-2024, 2024
Short summary
Short summary
Observational gridded products are essential for understanding the ocean, the atmosphere, and climate change; they support policy decisions and socioeconomic developments. This study provides an update of an ocean subsurface temperature and ocean heat content gridded product, named the IAPv4 data product, which is available for the upper 6000 m (119 levels) since 1940 (more reliable after ~1955) for monthly and 1° × 1° temporal and spatial resolutions.
Ming Chu, Xing Wei, Shangfei Hai, Yang Gao, Huiwang Gao, Yujiao Zhu, Biwu Chu, Nan Ma, Juan Hong, Yele Sun, and Xiaohong Yao
Atmos. Chem. Phys., 24, 6769–6786, https://doi.org/10.5194/acp-24-6769-2024, https://doi.org/10.5194/acp-24-6769-2024, 2024
Short summary
Short summary
We used a 20-bin WRF-Chem model to simulate NPF events in the NCP during a three-week observational period in the summer of 2019. The model was able to reproduce the observations during June 29–July 6, which was characterized by a high frequency of NPF occurrence.
Jiaxu Guo, Juepeng Zheng, Yidan Xu, Haohuan Fu, Wei Xue, Lanning Wang, Lin Gan, Ping Gao, Wubing Wan, Xianwei Wu, Zhitao Zhang, Liang Hu, Gaochao Xu, and Xilong Che
Geosci. Model Dev., 17, 3975–3992, https://doi.org/10.5194/gmd-17-3975-2024, https://doi.org/10.5194/gmd-17-3975-2024, 2024
Short summary
Short summary
To enhance the efficiency of experiments using SCAM, we train a learning-based surrogate model to facilitate large-scale sensitivity analysis and tuning of combinations of multiple parameters. Employing a hybrid method, we investigate the joint sensitivity of multi-parameter combinations across typical cases, identifying the most sensitive three-parameter combination out of 11. Subsequently, we conduct a tuning process aimed at reducing output errors in these cases.
Feifan Yan, Hang Su, Yafang Cheng, Rujin Huang, Hong Liao, Ting Yang, Yuanyuan Zhu, Shaoqing Zhang, Lifang Sheng, Wenbin Kou, Xinran Zeng, Shengnan Xiang, Xiaohong Yao, Huiwang Gao, and Yang Gao
Atmos. Chem. Phys., 24, 2365–2376, https://doi.org/10.5194/acp-24-2365-2024, https://doi.org/10.5194/acp-24-2365-2024, 2024
Short summary
Short summary
PM2.5 pollution is a major air quality issue deteriorating human health, and previous studies mostly focus on regions like the North China Plain and Yangtze River Delta. However, the characteristics of PM2.5 concentrations between these two regions are studied less often. Focusing on the transport corridor region, we identify an interesting seesaw transport phenomenon with stagnant weather conditions, conducive to PM2.5 accumulation over this region, resulting in large health effects.
Yangyang Yu, Shaoqing Zhang, Haohuan Fu, Dexun Chen, Yang Gao, Xiaopei Lin, Zhao Liu, and Xiaojing Lv
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-10, https://doi.org/10.5194/gmd-2024-10, 2024
Preprint withdrawn
Short summary
Short summary
The hardware-related perturbations caused by the heterogeneous many-core architectures can blend with software or human errors, which can affect the accuracy of the model consistency verification. We develop a deep learning-based consistency test tool for ESMs on the heterogeneous systems (ESM-DCT) and evaluate it in CESM on new Sunway system. The ESM-DCT can detect the existence of software or human errors when taking hardware-related perturbations into account.
Xing Wei, Yanjie Shen, Xiao-Ying Yu, Yang Gao, Huiwang Gao, Ming Chu, Yujiao Zhu, and Xiaohong Yao
Atmos. Chem. Phys., 23, 15325–15350, https://doi.org/10.5194/acp-23-15325-2023, https://doi.org/10.5194/acp-23-15325-2023, 2023
Short summary
Short summary
We investigate the contribution of grown new particles to Nccn at a rural mountain site in the North China Plain. The total particle number concentrations (Ncn) observed on 8 new particle formation (NPF) days were higher compared to non-NPF days. The Nccn at 0.2 % supersaturation (SS) and 0.4 % SS on the NPF days was significantly lower than on non-NPF days. Only one of eight NPF events had detectable net contributions to Nccn at 0.4 % SS and 1.0 % SS with increased κ values.
Jiangyu Li, Shaoqing Zhang, Qingxiang Liu, Xiaolin Yu, and Zhiwei Zhang
Geosci. Model Dev., 16, 6393–6412, https://doi.org/10.5194/gmd-16-6393-2023, https://doi.org/10.5194/gmd-16-6393-2023, 2023
Short summary
Short summary
Ocean surface waves play an important role in the air–sea interface but are rarely activated in high-resolution Earth system simulations due to their expensive computational costs. To alleviate this situation, this paper designs a new wave modeling framework with a multiscale grid system. Evaluations of a series of numerical experiments show that it has good feasibility and applicability in the WAVEWATCH III model, WW3, and can achieve the goals of efficient and high-precision wave simulation.
Chupeng Zhang, Shangfei Hai, Yang Gao, Yuhang Wang, Shaoqing Zhang, Lifang Sheng, Bin Zhao, Shuxiao Wang, Jingkun Jiang, Xin Huang, Xiaojing Shen, Junying Sun, Aura Lupascu, Manish Shrivastava, Jerome D. Fast, Wenxuan Cheng, Xiuwen Guo, Ming Chu, Nan Ma, Juan Hong, Qiaoqiao Wang, Xiaohong Yao, and Huiwang Gao
Atmos. Chem. Phys., 23, 10713–10730, https://doi.org/10.5194/acp-23-10713-2023, https://doi.org/10.5194/acp-23-10713-2023, 2023
Short summary
Short summary
New particle formation is an important source of atmospheric particles, exerting critical influences on global climate. Numerical models are vital tools to understanding atmospheric particle evolution, which, however, suffer from large biases in simulating particle numbers. Here we improve the model chemical processes governing particle sizes and compositions. The improved model reveals substantial contributions of newly formed particles to climate through effects on cloud condensation nuclei.
Yuyang Li, Jiewen Shen, Bin Zhao, Runlong Cai, Shuxiao Wang, Yang Gao, Manish Shrivastava, Da Gao, Jun Zheng, Markku Kulmala, and Jingkun Jiang
Atmos. Chem. Phys., 23, 8789–8804, https://doi.org/10.5194/acp-23-8789-2023, https://doi.org/10.5194/acp-23-8789-2023, 2023
Short summary
Short summary
We set up a new parameterization for 1.4 nm particle formation rates from sulfuric acid–dimethylamine (SA–DMA) nucleation, fully including the effects of coagulation scavenging and cluster stability. Incorporating the new parameterization into 3-D chemical transport models, we achieved better consistencies between simulation results and observation data. This new parameterization provides new insights into atmospheric nucleation simulations and its effects on atmospheric pollution or health.
Zhenming Wang, Shaoqing Zhang, Yishuai Jin, Yinglai Jia, Yangyang Yu, Yang Gao, Xiaolin Yu, Mingkui Li, Xiaopei Lin, and Lixin Wu
Geosci. Model Dev., 16, 705–717, https://doi.org/10.5194/gmd-16-705-2023, https://doi.org/10.5194/gmd-16-705-2023, 2023
Short summary
Short summary
To improve the numerical model predictability of monthly extended-range scales, we use the simplified slab ocean model (SOM) to restrict the complicated sea surface temperature (SST) bias from a 3-D dynamical ocean model. As for SST prediction, whether in space or time, the WRF-SOM is verified to have better performance than the WRF-ROMS, which has a significant impact on the atmosphere. For extreme weather events such as typhoons, the predictions of WRF-SOM are in good agreement with WRF-ROMS.
Yu Lin, Leiming Zhang, Qinchu Fan, He Meng, Yang Gao, Huiwang Gao, and Xiaohong Yao
Atmos. Chem. Phys., 22, 16073–16090, https://doi.org/10.5194/acp-22-16073-2022, https://doi.org/10.5194/acp-22-16073-2022, 2022
Short summary
Short summary
In this study, we analyzed 7-year (from May 2014 to April 2021) concentration data of six criteria air pollutants (PM2.5, PM10, O3, NO2, CO and SO2) as well as the sum of NO2 and O3 in six cities in South China. Three different analysis methods were used to identify emission-driven interannual variations and perturbations from varying weather conditions. In addition, a self-developed method was further introduced to constrain analysis uncertainties.
Jingzhe Sun, Yingjing Jiang, Shaoqing Zhang, Weimin Zhang, Lv Lu, Guangliang Liu, Yuhu Chen, Xiang Xing, Xiaopei Lin, and Lixin Wu
Geosci. Model Dev., 15, 4805–4830, https://doi.org/10.5194/gmd-15-4805-2022, https://doi.org/10.5194/gmd-15-4805-2022, 2022
Short summary
Short summary
An online ensemble coupled data assimilation system with the Community Earth System Model is designed and evaluated. This system uses the memory-based information transfer approach which avoids frequent I/O operations. The observations of surface pressure, sea surface temperature, and in situ temperature and salinity profiles can be effectively assimilated into the coupled model. That will facilitate a long-term high-resolution climate reanalysis once the algorithm efficiency is much improved.
Lu Yang, Hongli Fu, Xiaofan Luo, Shaoqing Zhang, and Xuefeng Zhang
The Cryosphere Discuss., https://doi.org/10.5194/tc-2022-92, https://doi.org/10.5194/tc-2022-92, 2022
Revised manuscript not accepted
Short summary
Short summary
During the melting season in Arctic, sea ice thickness is difficult to detect directly by the satellite remote sensing. A bivariate regression model is put forward in this study to construct sea ice thickness. Comparisons with observations show that the new sea ice thickness data has some advantages over other data sets. The experiment shows that the model is expected to provide an available data for improving the forecast accuracy of sea ice variables in the Arctic sea ice melting season.
Xiajie Yang, Qiaoqiao Wang, Nan Ma, Weiwei Hu, Yang Gao, Zhijiong Huang, Junyu Zheng, Bin Yuan, Ning Yang, Jiangchuan Tao, Juan Hong, Yafang Cheng, and Hang Su
Atmos. Chem. Phys., 22, 3743–3762, https://doi.org/10.5194/acp-22-3743-2022, https://doi.org/10.5194/acp-22-3743-2022, 2022
Short summary
Short summary
We use the GEOS-Chem model with additional anthropogenic and biomass burning chlorine emissions combined with updated parameterizations for N2O5 ＋ Cl chemistry to investigate the impacts of chlorine chemistry on air quality in China. Our study not only significantly improves the model's performance but also demonstrates the importance of non-sea-salt chlorine sources as well as an appropriate parameterization for N2O5 ＋ Cl chemistry to the impact of chlorine chemistry in China.
Yating Gao, Dihui Chen, Yanjie Shen, Yang Gao, Huiwang Gao, and Xiaohong Yao
Atmos. Chem. Phys., 22, 1515–1528, https://doi.org/10.5194/acp-22-1515-2022, https://doi.org/10.5194/acp-22-1515-2022, 2022
Short summary
Short summary
This study focuses on spatiotemporal heterogeneity of observed gaseous amines, NH3, their particulate counterparts in PM2.5 over different sea zones, and the disproportional release of alkaline gases and corresponding particulate counterparts from seawater in the sea zones in terms of different extents of enrichment of TMAH+ and DMAH+ in the sea surface microlayer (SML). A novel hypothesis is delivered.
Ying Zhou, Simo Hakala, Chao Yan, Yang Gao, Xiaohong Yao, Biwu Chu, Tommy Chan, Juha Kangasluoma, Shahzad Gani, Jenni Kontkanen, Pauli Paasonen, Yongchun Liu, Tuukka Petäjä, Markku Kulmala, and Lubna Dada
Atmos. Chem. Phys., 21, 17885–17906, https://doi.org/10.5194/acp-21-17885-2021, https://doi.org/10.5194/acp-21-17885-2021, 2021
Short summary
Short summary
We characterized the connection between new particle formation (NPF) events in terms of frequency, intensity and growth at a near-highway location in central Beijing and at a background mountain site 80 km away. Due to the substantial contribution of NPF to the global aerosol budget, identifying the conditions that promote the occurrence of regional NPF events could help understand their contribution on a large scale and would improve their implementation in global models.
Dihui Chen, Yanjie Shen, Juntao Wang, Yang Gao, Huiwang Gao, and Xiaohong Yao
Atmos. Chem. Phys., 21, 16413–16425, https://doi.org/10.5194/acp-21-16413-2021, https://doi.org/10.5194/acp-21-16413-2021, 2021
Short summary
Short summary
The study provides solid evidence to demonstrate that atmospheric trimethylamine (TMAgas) and particulate trimethylaminium in PM2.5 (TMAH+) observed in marine atmospheres were uniquely derived from seawater emissions. As sea-derived TMAgas correlated significantly with DMAgas and NH3gas, sea-derived DMAgas and NH3gas can be estimated and can quantify the contribution to the observed species in the marine atmosphere. Similarly, the contributions of primary DMAH+ have also been estimated.
Zhao Liu, Shaoqing Zhang, Yang Shen, Yuping Guan, and Xiong Deng
Nonlin. Processes Geophys., 28, 481–500, https://doi.org/10.5194/npg-28-481-2021, https://doi.org/10.5194/npg-28-481-2021, 2021
Short summary
Short summary
A general methodology is introduced to capture regime transitions of the Atlantic meridional overturning circulation (AMOC). The assimilation models with different parameters simulate different paths for the AMOC to switch between equilibrium states. Constraining model parameters with observations can significantly mitigate the model deviations, thus capturing AMOC regime transitions. This simple model study serves as a guideline for improving coupled general circulation models.
Liya Ma, Yujiao Zhu, Mei Zheng, Yele Sun, Lei Huang, Xiaohuan Liu, Yang Gao, Yanjie Shen, Huiwang Gao, and Xiaohong Yao
Atmos. Chem. Phys., 21, 183–200, https://doi.org/10.5194/acp-21-183-2021, https://doi.org/10.5194/acp-21-183-2021, 2021
Short summary
Short summary
In this study, we investigate three patterns of new particles growing to CCN (cloud condensation nuclei) size, i.e., one-stage growth and two-stage growth-A and growth-B patterns. Combining the observations of gaseous pollutants and measured or modeled particulate chemical species, the three growth patterns were discussed regarding the spatial heterogeneity, formation of secondary aerosols, and evaporation of semivolatile particulates as was the survival probability of new particles to CCN size.
Shaoqing Zhang, Haohuan Fu, Lixin Wu, Yuxuan Li, Hong Wang, Yunhui Zeng, Xiaohui Duan, Wubing Wan, Li Wang, Yuan Zhuang, Hongsong Meng, Kai Xu, Ping Xu, Lin Gan, Zhao Liu, Sihai Wu, Yuhu Chen, Haining Yu, Shupeng Shi, Lanning Wang, Shiming Xu, Wei Xue, Weiguo Liu, Qiang Guo, Jie Zhang, Guanghui Zhu, Yang Tu, Jim Edwards, Allison Baker, Jianlin Yong, Man Yuan, Yangyang Yu, Qiuying Zhang, Zedong Liu, Mingkui Li, Dongning Jia, Guangwen Yang, Zhiqiang Wei, Jingshan Pan, Ping Chang, Gokhan Danabasoglu, Stephen Yeager, Nan Rosenbloom, and Ying Guo
Geosci. Model Dev., 13, 4809–4829, https://doi.org/10.5194/gmd-13-4809-2020, https://doi.org/10.5194/gmd-13-4809-2020, 2020
Short summary
Short summary
Science advancement and societal needs require Earth system modelling with higher resolutions that demand tremendous computing power. We successfully scale the 10 km ocean and 25 km atmosphere high-resolution Earth system model to a new leading-edge heterogeneous supercomputer using state-of-the-art optimizing methods, promising the solution of high spatial resolution and time-varying frequency. Corresponding technical breakthroughs are of significance in modelling and HPC design communities.
Yang Gao, Deqiang Zhang, Juntao Wang, Huiwang Gao, and Xiaohong Yao
Atmos. Chem. Phys., 20, 9665–9677, https://doi.org/10.5194/acp-20-9665-2020, https://doi.org/10.5194/acp-20-9665-2020, 2020
Short summary
Short summary
Through the cruise campaign conducted over marginal seas in China, we found that the concentrations of condensation nuclei (Ncn) and cloud condensation nuclei (Nccn) were 1 order of magnitude larger than those in remote clear marine atmospheres, indicating overwhelming contributions from marine traffic emissions and long-range continental transport. Moreover, we derived regression equations used to estimate Ncn and Nccn from SO2 when the direct observations of Ncn and Nccn are not available.
Zhi-Zhen Ni, Kun Luo, Yang Gao, Xiang Gao, Fei Jiang, Cheng Huang, Jian-Ren Fan, Joshua S. Fu, and Chang-Hong Chen
Atmos. Chem. Phys., 20, 5963–5976, https://doi.org/10.5194/acp-20-5963-2020, https://doi.org/10.5194/acp-20-5963-2020, 2020
Short summary
Short summary
The Weather Research Forecast with Chemistry (WRF-Chem) model was used to simulate spatial and temporal O3 evolution in the Yangtze River Delta (YRD) region. Various atmospheric processes were analyzed to determine the influential factors of ozone formation through the integrated process rate method. This paper provides insight into urban O3 formation and dispersion during tropical cyclone events and supports the Model Intercomparison Study Asia Phase III (MICS-Asia Phase III).
Yi Zeng, Minghuai Wang, Chun Zhao, Siyu Chen, Zhoukun Liu, Xin Huang, and Yang Gao
Geosci. Model Dev., 13, 2125–2147, https://doi.org/10.5194/gmd-13-2125-2020, https://doi.org/10.5194/gmd-13-2125-2020, 2020
Short summary
Short summary
Dust aerosol can impact many processes of the Earth system, but large uncertainties still remain in dust simulations. In this study, we investigated dust simulation sensitivity to two dust emission schemes and three dry deposition schemes using WRF-Chem. An optimal combination of dry deposition scheme and dust emission scheme has been identified to best simulate the dust storm in comparison with observation. Our results highlight the importance of dry deposition schemes for dust simulation.
Xiadong An, Lifang Sheng, Qian Liu, Chun Li, Yang Gao, and Jianping Li
Atmos. Chem. Phys., 20, 4667–4680, https://doi.org/10.5194/acp-20-4667-2020, https://doi.org/10.5194/acp-20-4667-2020, 2020
Short summary
Short summary
Severe haze occurred in the North China Plain (NCP) in November to December 2015. We found that the two Rossby waveguides within the westerly jet originating from the Mediterranean were responsible for the haze formation in the NCP. The weak East Asia winter monsoon and anomalous circulation with ascending motion over southern China and descending motion over the NCP related to the two Rossby waveguides, which modulated haze accumulation and favored the maintenance of severe haze.
Jiangyu Li and Shaoqing Zhang
Geosci. Model Dev., 13, 1035–1054, https://doi.org/10.5194/gmd-13-1035-2020, https://doi.org/10.5194/gmd-13-1035-2020, 2020
Short summary
Short summary
Two assimilation systems developed using two nearly independent wave models are used to study the influences of various error sources including mode bias on wave data assimilation; a statistical method is explored to make full use of the merits of individual assimilation systems for bias correction, thus improving wave analysis greatly. This study opens a door to further our understanding of physical processes in waves and associated air–sea interactions for improving wave modeling.
Mingchen Ma, Yang Gao, Yuhang Wang, Shaoqing Zhang, L. Ruby Leung, Cheng Liu, Shuxiao Wang, Bin Zhao, Xing Chang, Hang Su, Tianqi Zhang, Lifang Sheng, Xiaohong Yao, and Huiwang Gao
Atmos. Chem. Phys., 19, 12195–12207, https://doi.org/10.5194/acp-19-12195-2019, https://doi.org/10.5194/acp-19-12195-2019, 2019
Short summary
Short summary
Ozone pollution has become severe in China, and extremely high ozone episodes occurred in summer 2017 over the North China Plain. While meteorology impacts are clear, we find that enhanced biogenic emissions, previously ignored by the community, driven by high vapor pressure deficit, land cover change and urban landscape contribute substantially to ozone formation. This study has significant implications for ozone pollution control with more frequent heat waves and urbanization growth in future.
Juntao Wang, Yanjie Shen, Kai Li, Yang Gao, Huiwang Gao, and Xiaohong Yao
Atmos. Chem. Phys., 19, 8845–8861, https://doi.org/10.5194/acp-19-8845-2019, https://doi.org/10.5194/acp-19-8845-2019, 2019
Short summary
Short summary
In this paper, we studied the spatiotemporal variability of Ncn and particle number size distributions, as well as Nccn and CCN activities over the NWPO in the spring of 2014. We found that a pool of nucleation-mode atmospheric particles is aloft over the NWPO. Through comprehensive comparison with observations in the literature, we illustrate the characteristics of Ncn and Nccn over the NWPO in 2014 and reveal their changes against the results measured two decades ago.
Junxi Zhang, Yang Gao, L. Ruby Leung, Kun Luo, Huan Liu, Jean-Francois Lamarque, Jianren Fan, Xiaohong Yao, Huiwang Gao, and Tatsuya Nagashima
Atmos. Chem. Phys., 19, 887–900, https://doi.org/10.5194/acp-19-887-2019, https://doi.org/10.5194/acp-19-887-2019, 2019
Short summary
Short summary
ACCMIP simulations were used to study NOy deposition over East Asia in the future. Both dry and wet NOy deposition show significant decreases in the 2100s under RCP4.5 and RCP8.5 due to large anthropogenic emission reduction. The changes in climate only significantly affect the wet deposition primarily linked to changes in precipitation. Over the coastal seas of China, weaker transport of NOy from land due to emission reduction infers a larger impact from shipping and lightning emissions.
Ge Zhang, Yang Gao, Wenju Cai, L. Ruby Leung, Shuxiao Wang, Bin Zhao, Minghuai Wang, Huayao Shan, Xiaohong Yao, and Huiwang Gao
Atmos. Chem. Phys., 19, 565–576, https://doi.org/10.5194/acp-19-565-2019, https://doi.org/10.5194/acp-19-565-2019, 2019
Short summary
Short summary
Based on observed data, this study reveals a distinct seesaw feature of abnormally high and low PM2.5 concentrations in December 2015 and January 2016 over North China. The mechanism of the seesaw pattern was found to be linked to a super El Niño and the Arctic Oscillation (AO). During the mature phase of El Niño in December 2015, the weakened East Asian winter monsoon favors strong haze formation; however, the circulation pattern was reversed in the next month due to the phase change of the AO.
Yujiao Zhu, Kai Li, Yanjie Shen, Yang Gao, Xiaohuan Liu, Yang Yu, Huiwang Gao, and Xiaohong Yao
Atmos. Chem. Phys., 19, 89–113, https://doi.org/10.5194/acp-19-89-2019, https://doi.org/10.5194/acp-19-89-2019, 2019
Short summary
Short summary
In this paper, we investigate new particle formation (NPF) events during seven cruises. NPF events were observed on 25 days and were most likely associated with the long-range transport of anthropogenic air pollutants. The relationship between the net generated amount of new particles and their apparent formation rate is established and explained in terms of the roles of different vapor precursors. The survival probability of new particles to CCN size is also discussed.
Junxi Zhang, Yang Gao, Kun Luo, L. Ruby Leung, Yang Zhang, Kai Wang, and Jianren Fan
Atmos. Chem. Phys., 18, 9861–9877, https://doi.org/10.5194/acp-18-9861-2018, https://doi.org/10.5194/acp-18-9861-2018, 2018
Short summary
Short summary
We used a regional model to investigate the impact of atmosphere with high temperature and low wind speed on ozone concentration. When these compound events (heat waves and stagnant weather) occur simultaneously, a striking ozone enhancement is revealed. This type of compound event is projected to increase more dominantly compared to single events in the future over the US, Europe, and China, implying the importance of reducing emissions in order to alleviate the impact from the compound events.
Pei Hou, Shiliang Wu, Jessica L. McCarty, and Yang Gao
Atmos. Chem. Phys., 18, 8173–8182, https://doi.org/10.5194/acp-18-8173-2018, https://doi.org/10.5194/acp-18-8173-2018, 2018
Short summary
Short summary
Atmospheric aerosols can be affected not only by emissions, but also meteorology, in particular precipitation. Analyses of the historical meteorological data based on multiple datasets show significant changes in precipitation characteristics, including precipitation intensity and frequency, over various regions around the world. We find that the precipitation changes over the past 30 years can easily lead to perturbations in atmospheric aerosols by 10 % or higher at the regional scale.
Zhi-zhen Ni, Kun Luo, Yang Gao, Fei Jiang, Xiang Gao, Jian-ren Fan, and Chang-hong Chen
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2018-76, https://doi.org/10.5194/acp-2018-76, 2018
Revised manuscript not accepted
Short summary
Short summary
A unique mechanism was found to modulate the high ozone episodes in Hangzhou during G20 summit: Driven by tropical cyclone convergence, prevailing north winds brought in emission sources; with invasion of tropical cycle, subsidence air and stagnant weather was induced, as well as the urban heat island effect, intensifying the ozone enhancement. Different atmospheric processes were further analyzed to elucidate the control factors of ozone formation through integrated process rate method.
Chengzhi Xing, Cheng Liu, Shanshan Wang, Ka Lok Chan, Yang Gao, Xin Huang, Wenjing Su, Chengxin Zhang, Yunsheng Dong, Guangqiang Fan, Tianshu Zhang, Zhenyi Chen, Qihou Hu, Hang Su, Zhouqing Xie, and Jianguo Liu
Atmos. Chem. Phys., 17, 14275–14289, https://doi.org/10.5194/acp-17-14275-2017, https://doi.org/10.5194/acp-17-14275-2017, 2017
Short summary
Short summary
Vertical profiles of the aerosol extinction coefficient and NO2 and HCHO concentrations were retrieved from MAX-DOAS measurement, while vertical distribution of O3 was obtained using ozone lidar. The measured O3 vertical distribution indicates that the ozone production not only occurs at surface level but also at higher altitudes (about 1.1 km), which are not directly related to horizontal and vertical transportation but are mainly influenced by the abundance of VOCs in the lower troposphere.
Yuxin Zhao, Xiong Deng, Shaoqing Zhang, Zhengyu Liu, Chang Liu, Gabriel Vecchi, Guijun Han, and Xinrong Wu
Nonlin. Processes Geophys., 24, 681–694, https://doi.org/10.5194/npg-24-681-2017, https://doi.org/10.5194/npg-24-681-2017, 2017
Short summary
Short summary
Here with a simple coupled model that simulates typical scale interactions in the climate system, we study the optimal OTWs for the coupled media so that climate signals can be most accurately recovered by CDA. Results show that an optimal OTW determined from the de-correlation timescale provides maximal observational information that best fits the characteristic variability of the coupled medium during the data blending process.
Yujiao Zhu, Caiqing Yan, Renyi Zhang, Zifa Wang, Mei Zheng, Huiwang Gao, Yang Gao, and Xiaohong Yao
Atmos. Chem. Phys., 17, 9469–9484, https://doi.org/10.5194/acp-17-9469-2017, https://doi.org/10.5194/acp-17-9469-2017, 2017
Short summary
Short summary
This study reports the distinct effects of street canyons on new particle formation (NPF) under warm or cold ambient temperature conditions because of on-road vehicle emissions; i.e., stronger condensation sinks are responsible for the reduced NPF in the springtime, but efficient nucleation and partitioning of gaseous species contribute to the enhanced NPF in the wintertime. The oxidization of biogenic organics is suggested to play an important role in growing new particles.
Xiaolin Yu, Shaoqing Zhang, Xiaopei Lin, and Mingkui Li
Nonlin. Processes Geophys., 24, 125–139, https://doi.org/10.5194/npg-24-125-2017, https://doi.org/10.5194/npg-24-125-2017, 2017
Short summary
Short summary
Parameter estimation (PE) with a global coupled data assimilation (CDA) system can improve the runs, but the improvement remains in a limited range. We have to come back to simple models to sort out the sources of noises. Incomplete observations and the chaotic nature of the atmosphere have much stronger influences on the PE through the state estimation (SE) process. Here, we propose the guidelines of how to enhance the signal-to-noise ratio under partial SE status.
Xiaomeng Huang, Qiang Tang, Yuheng Tseng, Yong Hu, Allison H. Baker, Frank O. Bryan, John Dennis, Haohuan Fu, and Guangwen Yang
Geosci. Model Dev., 9, 4209–4225, https://doi.org/10.5194/gmd-9-4209-2016, https://doi.org/10.5194/gmd-9-4209-2016, 2016
Short summary
Short summary
Refining model resolution is helpful for representing climate processes. With resolution increasing, the computational cost will become very huge. We designed a new solver to accelerate the high-resolution ocean simulation so as to reduce the computational cost and make full use of the computing resource of supercomputers. Our results show that the simulation speed of the improved ocean component with 0.1° resolution achieves 10.5 simulated years per wall-clock day on 16875 CPU cores.
S. Xu, X. Huang, L.-Y. Oey, F. Xu, H. Fu, Y. Zhang, and G. Yang
Geosci. Model Dev., 8, 2815–2827, https://doi.org/10.5194/gmd-8-2815-2015, https://doi.org/10.5194/gmd-8-2815-2015, 2015
Short summary
Short summary
In this paper, we redesign the mpiPOM with GPUs. Specifically, we first convert the model from its original Fortran form to a new CUDA-C version, POM.gpu-v1.0. Then we optimize the code on each of the GPUs, the communications between the GPUs, and the I/O between the GPUs and the CPUs.
We show that the performance of the new model on a workstation containing 4 GPUs is comparable to that on a powerful cluster with 408 standard CPU cores, and it reduces the energy consumption by a factor of 6.8.
G.-J. Han, X.-F. Zhang, S. Zhang, X.-R. Wu, and Z. Liu
Nonlin. Processes Geophys., 21, 357–366, https://doi.org/10.5194/npg-21-357-2014, https://doi.org/10.5194/npg-21-357-2014, 2014
Related subject area
Numerical methods
A joint reconstruction and model selection approach for large-scale linear inverse modeling (msHyBR v2)
Assimilation of snow water equivalent from AMSR2 and IMS satellite data utilizing the local ensemble transform Kalman filter
The Paleochrono-1.1 probabilistic model to derive a common age model for several paleoclimatic sites using absolute and relative dating constraints
Explicit stochastic advection algorithms for the regional-scale particle-resolved atmospheric aerosol model WRF-PartMC (v1.0)
Enhancing Single-Precision with Quasi Double-Precision: Achieving Double-Precision Accuracy in the Model for Prediction Across Scales-Atmosphere (MPAS-A) version 8.2.1
The Measurement Error Proxy System Model: MEPSM v0.2
Hydro-geomorphological modelling of leaky wooden dam efficacy from reach to catchment scale with CAESAR-Lisflood 1.9j
Numerical stabilization methods for level-set-based ice front migration
Modelling chemical advection during magma ascent
Advances in Land Surface Model-based Forecasting: A Comparison of LSTM, Gradient Boosting, and Feedforward Neural Networks as Prognostic State Emulators in a Case Study with ECLand
A subgrid method for the linear inertial equations of a compound flood model
Consistent point data assimilation in Firedrake and Icepack
A computationally efficient parameterization of aerosol, cloud and precipitation pH for application at global and regional scale (EQSAM4Clim-v12)
Assessing the benefits of approximately exact step sizes for Picard and Newton solver in simulating ice flow (FEniCS-full-Stokes v.1.3.2)
Assessing effects of climate and technology uncertainties in large natural resource allocation problems
Development of high-order global dynamical core using discontinuous Galerkin method for atmospheric LES and proposal of test cases: SCALE-DG v0.8.0
Introducing Iterative Model Calibration (IMC) v1.0: A Generalizable Framework for Numerical Model Calibration with a CAESAR-Lisflood Case Study
VISIR-2: ship weather routing in Python
Incremental analysis update (IAU) in the Model for Prediction Across Scales coupled with the Joint Effort for Data assimilation Integration (MPAS–JEDI 2.0.0)
Decision-making strategies implemented in SolFinder 1.0 to identify eco-efficient aircraft trajectories: application study in AirTraf 3.0
Developing meshing workflows in Gmsh v4.11 for the geologic uncertainty assessment of high-temperature aquifer thermal energy storage
Development and preliminary validation of a land surface image assimilation system based on the Common Land Model
NorSand4AI: a comprehensive triaxial test simulation database for NorSand constitutive model materials
ParticleDA.jl v.1.0: a distributed particle-filtering data assimilation package
HETerogeneous vectorized or Parallel (HETPv1.0): an updated inorganic heterogeneous chemistry solver for the metastable-state NH4+–Na+–Ca2+–K+–Mg2+–SO42−–NO3−–Cl−–H2O system based on ISORROPIA II
Three-dimensional geological modelling of igneous intrusions in LoopStructural v1.5.10
Estimating volcanic ash emissions using retrieved satellite ash columns and inverse ash transport modeling using VolcanicAshInversion v1.2.1, within the operational eEMEP (emergency European Monitoring and Evaluation Programme) volcanic plume forecasting system (version rv4_17)
Accounting for uncertainties in forecasting tropical-cyclone-induced compound flooding
An automatic mesh generator for coupled 1D–2D hydrodynamic models
Numerical coupling of aerosol emissions, dry removal, and turbulent mixing in the E3SM Atmosphere Model version 1 (EAMv1) – Part 1: Dust budget analyses and the impacts of a revised coupling scheme
Numerical coupling of aerosol emissions, dry removal, and turbulent mixing in the E3SM Atmosphere Model version 1 (EAMv1) – Part 2: A semi-discrete error analysis framework for assessing coupling schemes
jsmetrics v0.2.0: a Python package for metrics and algorithms used to identify or characterise atmospheric jet streams
P3D-BRNS v1.0.0: a three-dimensional, multiphase, multicomponent, pore-scale reactive transport modelling package for simulating biogeochemical processes in subsurface environments
MinVoellmy v1: a lightweight model for simulating rapid mass movements based on a modified Voellmy rheology
Scalable Feature Extraction and Tracking (SCAFET): a general framework for feature extraction from large climate data sets
Sweep interpolation: a cost-effective semi-Lagrangian scheme in the Global Environmental Multiscale model
CHONK 1.0: landscape evolution framework: cellular automata meets graph theory
Perspectives of physics-based machine learning strategies for geoscientific applications governed by partial differential equations
Calibration of absorbing boundary layers for geoacoustic wave modeling in pseudo-spectral time-domain methods
GeoINR 1.0: an implicit neural network approach to three-dimensional geological modelling
Parameterization and tuning of the Bay of Biscay Atlantis model v1
A comparison of Eulerian and Lagrangian methods for vertical particle transport in the water column
AutoQS v1: automatic parametrization of QuickSampling based on training images analysis
Implementation and application of ensemble optimal interpolation on an operational chemistry weather model for improving PM2.5 and visibility predictions
A dynamical core based on a discontinuous Galerkin method for higher-order finite-element sea ice modeling
GStatSim V1.0: a Python package for geostatistical interpolation and conditional simulation
Leveraging Google's Tensor Processing Units for tsunami-risk mitigation planning in the Pacific Northwest and beyond
An improved subgrid channel model with upwind-form artificial diffusion for river hydrodynamics and floodplain inundation simulation
A model instability issue in the National Centers for Environmental Prediction Global Forecast System version 16 and potential solutions
A comparison of 3-D spherical shell thermal convection results at low to moderate Rayleigh number using ASPECT (version 2.2.0) and CitcomS (version 3.3.1)
Malena Sabaté Landman, Julianne Chung, Jiahua Jiang, Scot M. Miller, and Arvind K. Saibaba
Geosci. Model Dev., 17, 8853–8872, https://doi.org/10.5194/gmd-17-8853-2024, https://doi.org/10.5194/gmd-17-8853-2024, 2024
Short summary
Short summary
Making an informed decision about what prior information to incorporate or discard in an inverse model is important yet very challenging, as it is often not straightforward to distinguish between informative and non-informative variables. In this study, we develop a new approach for incorporating prior information in an inverse model using predictor variables, while simultaneously selecting the relevant predictor variables for the estimation of the unknown quantity of interest.
Joonlee Lee, Myong-In Lee, Sunlae Tak, Eunkyo Seo, and Yong-Keun Lee
Geosci. Model Dev., 17, 8799–8816, https://doi.org/10.5194/gmd-17-8799-2024, https://doi.org/10.5194/gmd-17-8799-2024, 2024
Short summary
Short summary
We developed an advanced snow water equivalent (SWE) data assimilation framework using satellite data based on a land surface model. The results of this study highlight the beneficial impact of data assimilation by effectively combining land surface model and satellite-derived data according to their relative uncertainty, thereby controlling not only transitional regions but also the regions with heavy snow accumulation that are difficult to detect by satellite.
Frédéric Parrenin, Marie Bouchet, Christo Buizert, Emilie Capron, Ellen Corrick, Russell Drysdale, Kenji Kawamura, Amaëlle Landais, Robert Mulvaney, Ikumi Oyabu, and Sune Olander Rasmussen
Geosci. Model Dev., 17, 8735–8750, https://doi.org/10.5194/gmd-17-8735-2024, https://doi.org/10.5194/gmd-17-8735-2024, 2024
Short summary
Short summary
The Paleochrono-1.1 probabilistic dating model allows users to derive a common and optimized chronology for several paleoclimatic sites from various archives (ice cores, speleothems, marine cores, lake cores, etc.). It combines prior sedimentation scenarios with chronological information such as dated horizons, dated intervals, stratigraphic links and (for ice cores) Δdepth observations. Paleochrono-1.1 is available under an open-source license.
Jeffrey H. Curtis, Nicole Riemer, and Matthew West
Geosci. Model Dev., 17, 8399–8420, https://doi.org/10.5194/gmd-17-8399-2024, https://doi.org/10.5194/gmd-17-8399-2024, 2024
Short summary
Short summary
This paper introduces a numerical method for simulating particle-based aerosol transport in atmospheric models. We detail the various numerical properties of the advection order method and demonstrate its implementation in a 3D weather prediction model (WRF) for the first time. Particle-based techniques improve the accuracy of aerosol size and composition predictions, which are key for aerosol–cloud and aerosol–radiation interactions.
Jiayi Lai, Lanning Wang, Qizhong Wu, Yizhou Yang, and Fang Wang
EGUsphere, https://doi.org/10.5194/egusphere-2024-2986, https://doi.org/10.5194/egusphere-2024-2986, 2024
Short summary
Short summary
In this study, we applied the quasi double-precision algorithm to MPAS-A. Found that, the algorithm can effectively reduce the errors introduced by using low precision through the iterative process of time integration. The error of surface pressure of 4 cases are reduced by 68%, 75%, 97%, 96%. When applied the quasi double-precision algorithm in MPAS-A, we achieved to reduce all double precision to single precision, memory has been reduced by almost half, while the computation increases only 2%.
Matt J. Fischer
Geosci. Model Dev., 17, 6745–6760, https://doi.org/10.5194/gmd-17-6745-2024, https://doi.org/10.5194/gmd-17-6745-2024, 2024
Short summary
Short summary
In paleoclimate research, proxy system models (PSMs) model chemical or biological systems which receive environmental input and output (e.g., geochemical signals). The environmental inputs are rarely noiseless, which causes problems when calibrating multi-input PSMs. Here a PSM is developed which includes generalized noise in both model inputs and outputs and prior information. A quasi-Bayesian method enhances the stability of the solution of the Measurement Error Proxy System Model.
Joshua M. Wolstenholme, Christopher J. Skinner, David J. Milan, Robert E. Thomas, and Daniel R. Parsons
EGUsphere, https://doi.org/10.5194/egusphere-2024-2132, https://doi.org/10.5194/egusphere-2024-2132, 2024
Short summary
Short summary
Leaky wooden dams are a type of natural flood management intervention that aim to reduce flood risk downstream by temporarily holding back water during a storm event and releasing it afterwards. These structures alter the river hydrology, and therefore the geomorphology, yet often this is excluded from numerical models. Here we show that by not simulating geomorphology we are currently underestimating the efficacy of these structures to reduce the flood peak and store water.
Gong Cheng, Mathieu Morlighem, and G. Hilmar Gudmundsson
Geosci. Model Dev., 17, 6227–6247, https://doi.org/10.5194/gmd-17-6227-2024, https://doi.org/10.5194/gmd-17-6227-2024, 2024
Short summary
Short summary
We conducted a comprehensive analysis of the stabilization and reinitialization techniques currently employed in ISSM and Úa for solving level-set equations, specifically those related to the dynamic representation of moving ice fronts within numerical ice sheet models. Our results demonstrate that the streamline upwind Petrov–Galerkin (SUPG) method outperforms the other approaches. We found that excessively frequent reinitialization can lead to exceptionally high errors in simulations.
Hugo Dominguez, Nicolas Riel, and Pierre Lanari
Geosci. Model Dev., 17, 6105–6122, https://doi.org/10.5194/gmd-17-6105-2024, https://doi.org/10.5194/gmd-17-6105-2024, 2024
Short summary
Short summary
Predicting the behaviour of magmatic systems is important for understanding Earth's matter and heat transport. Numerical modelling is a technique that can predict complex systems at different scales of space and time by solving equations using various techniques. This study tests four algorithms to find the best way to transport the melt composition. The "weighted essentially non-oscillatory" algorithm emerges as the best choice, minimising errors and preserving system mass well.
Marieke Wesselkamp, Matthew Chantry, Ewan Pinnington, Margarita Choulga, Souhail Boussetta, Maria Kalweit, Joschka Bödecker, Carsten F. Dormann, Florian Pappenberger, and Gianpaolo Balsamo
EGUsphere, https://doi.org/10.5194/egusphere-2024-2081, https://doi.org/10.5194/egusphere-2024-2081, 2024
Short summary
Short summary
We compared spatio-temporal forecast performances of three popular machine learning approaches that learned processes of water and energy exchange on the earth surface from a large physical model. The forecasting models were developed with reanalysis data and simulations on a European scale and transferred to the Globe. We found that all approaches deliver highly accurate predictions until long time horizons, implying their usefulness to advance land surface forecasting when data is available.
Maarten van Ormondt, Tim Leijnse, Roel de Goede, Kees Nederhoff, and Ap van Dongeren
EGUsphere, https://doi.org/10.5194/egusphere-2024-1839, https://doi.org/10.5194/egusphere-2024-1839, 2024
Short summary
Short summary
Accurate flood risk assessments are crucial for storm protection. To achieve efficiency, computational costs must be minimized. This paper introduces a novel subgrid approach for Linear Inertial Equations (LIE) with bed level and friction variations, implemented in the SFINCS model. Pre-processed lookup tables enhance simulation precision with lower costs. Validations show significant accuracy improvement, even at coarser resolutions.
Reuben W. Nixon-Hill, Daniel Shapero, Colin J. Cotter, and David A. Ham
Geosci. Model Dev., 17, 5369–5386, https://doi.org/10.5194/gmd-17-5369-2024, https://doi.org/10.5194/gmd-17-5369-2024, 2024
Short summary
Short summary
Scientists often use models to study complex processes, like the movement of ice sheets, and compare them to measurements for estimating quantities that are hard to measure. We highlight an approach that ensures accurate results from point data sources (e.g. height measurements) by evaluating the numerical solution at true point locations. This method improves accuracy, aids communication between scientists, and is well-suited for integration with specialised software that automates processes.
Swen Metzger, Samuel Rémy, Jason E. Williams, Vincent Huijnen, and Johannes Flemming
Geosci. Model Dev., 17, 5009–5021, https://doi.org/10.5194/gmd-17-5009-2024, https://doi.org/10.5194/gmd-17-5009-2024, 2024
Short summary
Short summary
EQSAM4Clim has recently been revised to provide an accurate and efficient method for calculating the acidity of atmospheric particles. It is based on an analytical concept that is sufficiently fast and free of numerical noise, which makes it attractive for air quality forecasting. Version 12 allows the calculation of aerosol composition based on the gas–liquid–solid and the reduced gas–liquid partitioning with the associated water uptake for both cases, including the acidity of the aerosols.
Niko Schmidt, Angelika Humbert, and Thomas Slawig
Geosci. Model Dev., 17, 4943–4959, https://doi.org/10.5194/gmd-17-4943-2024, https://doi.org/10.5194/gmd-17-4943-2024, 2024
Short summary
Short summary
Future sea-level rise is of big significance for coastal regions. The melting and acceleration of glaciers plays a major role in sea-level change. Computer simulation of glaciers costs a lot of computational resources. In this publication, we test a new way of simulating glaciers. This approach produces the same results but has the advantage that it needs much less computation time. As simulations can be obtained with fewer computation resources, higher resolution and physics become affordable.
Jevgenijs Steinbuks, Yongyang Cai, Jonas Jaegermeyr, and Thomas W. Hertel
Geosci. Model Dev., 17, 4791–4819, https://doi.org/10.5194/gmd-17-4791-2024, https://doi.org/10.5194/gmd-17-4791-2024, 2024
Short summary
Short summary
This paper applies a cutting-edge numerical method, SCEQ, to show how uncertain climate change and technological progress affect the future utilization of the world's scarce land resources. The paper's key insight is to illustrate how much global cropland will expand when future crop yields are unknown. The study finds the range of outcomes for land use change to be smaller when using this novel method compared to existing deterministic models.
Yuta Kawai and Hirofumi Tomita
EGUsphere, https://doi.org/10.5194/egusphere-2024-1477, https://doi.org/10.5194/egusphere-2024-1477, 2024
Short summary
Short summary
When considering future high-resolution atmospheric simulations with O(10–100 m) grid spacing, such as global large-eddy simulations, numerical errors with the conventional low-order dynamical cores can contaminate the effects of turbulent parameterization. To achieve high-order discretization, we developed a global atmospheric dynamical core using the discontinuous Galerkin method (DGM). By conducting several validation tests, we discussed the impact of high-order DGM on the atmospheric flows.
Chayan Banerjee, Kien Nguyen, Clinton Fookes, Gregory Hancock, and Thomas Coulthard
EGUsphere, https://doi.org/10.5194/egusphere-2024-1191, https://doi.org/10.5194/egusphere-2024-1191, 2024
Short summary
Short summary
In geosciences, the reliance on numerical models necessitates the precise calibration of their parameters to effectively translate information from observed to unobserved settings. We introduce a generalizable framework for calibrating numerical models, with a case study of the geomorphological model CAESAR-Lisflood. This approach efficiently identifies the optimal set of parameters for a given numerical model, enabling retrospective and prospective analyses at various temporal resolutions.
Gianandrea Mannarini, Mario Leonardo Salinas, Lorenzo Carelli, Nicola Petacco, and Josip Orović
Geosci. Model Dev., 17, 4355–4382, https://doi.org/10.5194/gmd-17-4355-2024, https://doi.org/10.5194/gmd-17-4355-2024, 2024
Short summary
Short summary
Ship weather routing has the potential to reduce CO2 emissions, but it currently lacks open and verifiable research. The Python-refactored VISIR-2 model considers currents, waves, and wind to optimise routes. The model was validated, and its computational performance is quasi-linear. For a ferry sailing in the Mediterranean Sea, VISIR-2 yields the largest percentage emission savings for upwind navigation. Given the vessel performance curve, the model is generalisable across various vessel types.
Soyoung Ha, Jonathan J. Guerrette, Ivette Hernández Baños, William C. Skamarock, and Michael G. Duda
Geosci. Model Dev., 17, 4199–4211, https://doi.org/10.5194/gmd-17-4199-2024, https://doi.org/10.5194/gmd-17-4199-2024, 2024
Short summary
Short summary
To mitigate the imbalances in the initial conditions, this study introduces our recent implementation of the incremental analysis update (IAU) in the Model for Prediction Across Scales – Atmospheric (MPAS-A) component coupled with the Joint Effort for Data assimilation Integration (JEDI) through the cycling system. A month-long cycling run demonstrates the successful implementation of the IAU capability in the MPAS–JEDI cycling system.
Federica Castino, Feijia Yin, Volker Grewe, Hiroshi Yamashita, Sigrun Matthes, Simone Dietmüller, Sabine Baumann, Manuel Soler, Abolfazl Simorgh, Maximilian Mendiguchia Meuser, Florian Linke, and Benjamin Lührs
Geosci. Model Dev., 17, 4031–4052, https://doi.org/10.5194/gmd-17-4031-2024, https://doi.org/10.5194/gmd-17-4031-2024, 2024
Short summary
Short summary
We introduce SolFinder 1.0, a decision-making tool to select trade-offs between different objective functions for optimal aircraft trajectories, including fuel use, flight time, NOx emissions, contrail distance, and climate impact. The module is included in the AirTraf 3.0 submodel and uses weather conditions simulated by the EMAC atmospheric model. This paper focuses on the ability of SolFinder to identify eco-efficient trajectories, reducing a flight's climate impact at limited cost penalties.
Ali Dashti, Jens C. Grimmer, Christophe Geuzaine, Florian Bauer, and Thomas Kohl
Geosci. Model Dev., 17, 3467–3485, https://doi.org/10.5194/gmd-17-3467-2024, https://doi.org/10.5194/gmd-17-3467-2024, 2024
Short summary
Short summary
This study developed new meshing workflows to enable the automatic generation of meshes that follow geological models. The workflow allows for importing several geological models as input for Gmsh and later exporting the same number of high-quality meshes. This way, geological uncertainty is directly included in the numerical simulations. This study evaluates the impact of the geological uncertainty on thermohydraulic performance of two reservoirs for high-temperature heat storage applications.
Wangbin Shen, Zhaohui Lin, Zhengkun Qin, and Juan Li
Geosci. Model Dev., 17, 3447–3465, https://doi.org/10.5194/gmd-17-3447-2024, https://doi.org/10.5194/gmd-17-3447-2024, 2024
Short summary
Short summary
In this study, a land surface image assimilation system capable of optimizing the spatial structure of the background field is constructed by introducing the curvelet analysis method and taking the similarity of image structure as a weak constraint. The findings demonstrate that the assimilation of surface soil moisture observation images effectively and reasonably enhances the spatial structure of soil moisture analysis field.
Luan Carlos de Sena Monteiro Ozelim, Michéle Dal Toé Casagrande, and André Luís Brasil Cavalcante
Geosci. Model Dev., 17, 3175–3197, https://doi.org/10.5194/gmd-17-3175-2024, https://doi.org/10.5194/gmd-17-3175-2024, 2024
Short summary
Short summary
The paper addresses synthetic dataset challenges in nonlinear constitutive modeling of soils, providing two datasets: one with 2000 soil types, 40 test conditions each (160 000 triaxial tests), and a second with 2048 soil types, 42 test conditions each (172 032 triaxial tests). Each dataset is a 4000×10 matrix applicable for multivariate forecasting and geotechnical simulations. In addition, a new Python code is introduced, empowering researchers to leverage Python packages for NorSand analyses.
Daniel Giles, Matthew M. Graham, Mosè Giordano, Tuomas Koskela, Alexandros Beskos, and Serge Guillas
Geosci. Model Dev., 17, 2427–2445, https://doi.org/10.5194/gmd-17-2427-2024, https://doi.org/10.5194/gmd-17-2427-2024, 2024
Short summary
Short summary
Digital twins of physical and human systems informed by real-time data are becoming ubiquitous across a wide range of settings. Progress for researchers is currently limited by a lack of tools to run these models effectively and efficiently. A key challenge is the optimal use of high-performance computing environments. The work presented here focuses on a developed open-source software platform which aims to improve this usage, with an emphasis placed on flexibility, efficiency, and scalability.
Stefan J. Miller, Paul A. Makar, and Colin J. Lee
Geosci. Model Dev., 17, 2197–2219, https://doi.org/10.5194/gmd-17-2197-2024, https://doi.org/10.5194/gmd-17-2197-2024, 2024
Short summary
Short summary
This work outlines a new solver written in Fortran to calculate the partitioning of metastable aerosols at thermodynamic equilibrium based on the forward algorithms of ISORROPIA II. The new code includes numerical improvements that decrease the computational speed (compared to ISORROPIA II) while improving the accuracy of the partitioning solution.
Fernanda Alvarado-Neves, Laurent Ailleres, Lachlan Grose, Alexander R. Cruden, and Robin Armit
Geosci. Model Dev., 17, 1975–1993, https://doi.org/10.5194/gmd-17-1975-2024, https://doi.org/10.5194/gmd-17-1975-2024, 2024
Short summary
Short summary
Previous work has demonstrated that adding geological knowledge to modelling methods creates more accurate and reliable models. Following this reasoning, we added constraints from magma emplacement mechanisms into existing modelling frameworks to improve the 3D characterisation of igneous intrusions. We tested the method on synthetic and real-world case studies, and the results show that our method can reproduce intrusion morphologies with no manual processing and using realistic datasets.
André R. Brodtkorb, Anna Benedictow, Heiko Klein, Arve Kylling, Agnes Nyiri, Alvaro Valdebenito, Espen Sollum, and Nina Kristiansen
Geosci. Model Dev., 17, 1957–1974, https://doi.org/10.5194/gmd-17-1957-2024, https://doi.org/10.5194/gmd-17-1957-2024, 2024
Short summary
Short summary
It is vital to know the extent and concentration of volcanic ash in the atmosphere during a volcanic eruption. Whilst satellite imagery may give an estimate of the ash right now (assuming no cloud coverage), we also need to know where it will be in the coming hours. This paper presents a method for estimating parameters for a volcanic eruption based on satellite observations of ash in the atmosphere. The software package is open source and applicable to similar inversion scenarios.
Kees Nederhoff, Maarten van Ormondt, Jay Veeramony, Ap van Dongeren, José Antonio Álvarez Antolínez, Tim Leijnse, and Dano Roelvink
Geosci. Model Dev., 17, 1789–1811, https://doi.org/10.5194/gmd-17-1789-2024, https://doi.org/10.5194/gmd-17-1789-2024, 2024
Short summary
Short summary
Forecasting tropical cyclones and their flooding impact is challenging. Our research introduces the Tropical Cyclone Forecasting Framework (TC-FF), enhancing cyclone predictions despite uncertainties. TC-FF generates global wind and flood scenarios, valuable even in data-limited regions. Applied to cases like Cyclone Idai, it showcases potential in bettering disaster preparation, marking progress in handling cyclone threats.
Younghun Kang and Ethan J. Kubatko
Geosci. Model Dev., 17, 1603–1625, https://doi.org/10.5194/gmd-17-1603-2024, https://doi.org/10.5194/gmd-17-1603-2024, 2024
Short summary
Short summary
Models used to simulate the flow of coastal and riverine waters, including flooding, require a geometric representation (or mesh) of geographic features that exhibit a range of disparate spatial scales from large, open waters to small, narrow channels. Representing these features in an accurate way without excessive computational overhead presents a challenge. Here, we develop an automatic mesh generation tool to help address this challenge. Our results demonstrate the efficacy of our approach.
Hui Wan, Kai Zhang, Christopher J. Vogl, Carol S. Woodward, Richard C. Easter, Philip J. Rasch, Yan Feng, and Hailong Wang
Geosci. Model Dev., 17, 1387–1407, https://doi.org/10.5194/gmd-17-1387-2024, https://doi.org/10.5194/gmd-17-1387-2024, 2024
Short summary
Short summary
Sophisticated numerical models of the Earth's atmosphere include representations of many physical and chemical processes. In numerical simulations, these processes need to be calculated in a certain sequence. This study reveals the weaknesses of the sequence of calculations used for aerosol processes in a global atmosphere model. A revision of the sequence is proposed and its impacts on the simulated global aerosol climatology are evaluated.
Christopher J. Vogl, Hui Wan, Carol S. Woodward, and Quan M. Bui
Geosci. Model Dev., 17, 1409–1428, https://doi.org/10.5194/gmd-17-1409-2024, https://doi.org/10.5194/gmd-17-1409-2024, 2024
Short summary
Short summary
Generally speaking, accurate climate simulation requires an accurate evolution of the underlying mathematical equations on large computers. The equations are typically formulated and evolved in process groups. Process coupling refers to how the evolution of each group is combined with that of other groups to evolve the full set of equations for the whole atmosphere. This work presents a mathematical framework to evaluate methods without the need to first implement the methods.
Tom Keel, Chris Brierley, and Tamsin Edwards
Geosci. Model Dev., 17, 1229–1247, https://doi.org/10.5194/gmd-17-1229-2024, https://doi.org/10.5194/gmd-17-1229-2024, 2024
Short summary
Short summary
Jet streams are an important control on surface weather as their speed and shape can modify the properties of weather systems. Establishing trends in the operation of jet streams may provide some indication of the future of weather in a warming world. Despite this, it has not been easy to establish trends, as many methods have been used to characterise them in data. We introduce a tool containing various implementations of jet stream statistics and algorithms that works in a standardised manner.
Amir Golparvar, Matthias Kästner, and Martin Thullner
Geosci. Model Dev., 17, 881–898, https://doi.org/10.5194/gmd-17-881-2024, https://doi.org/10.5194/gmd-17-881-2024, 2024
Short summary
Short summary
Coupled reaction transport modelling is an established and beneficial method for studying natural and synthetic porous material, with applications ranging from industrial processes to natural decompositions in terrestrial environments. Up to now, a framework that explicitly considers the porous structure (e.g. from µ-CT images) for modelling the transport of reactive species is missing. We presented a model that overcomes this limitation and represents a novel numerical simulation toolbox.
Stefan Hergarten
Geosci. Model Dev., 17, 781–794, https://doi.org/10.5194/gmd-17-781-2024, https://doi.org/10.5194/gmd-17-781-2024, 2024
Short summary
Short summary
The Voellmy rheology has been widely used for simulating snow and rock avalanches. Recently, a modified version of this rheology was proposed, which turned out to be able to predict the observed long runout of large rock avalanches theoretically. The software MinVoellmy presented here is the first numerical implementation of the modified rheology. It consists of MATLAB and Python classes, where simplicity and parsimony were the design goals.
Arjun Babu Nellikkattil, Danielle Lemmon, Travis Allen O'Brien, June-Yi Lee, and Jung-Eun Chu
Geosci. Model Dev., 17, 301–320, https://doi.org/10.5194/gmd-17-301-2024, https://doi.org/10.5194/gmd-17-301-2024, 2024
Short summary
Short summary
This study introduces a new computational framework called Scalable Feature Extraction and Tracking (SCAFET), designed to extract and track features in climate data. SCAFET stands out by using innovative shape-based metrics to identify features without relying on preconceived assumptions about the climate model or mean state. This approach allows more accurate comparisons between different models and scenarios.
Mohammad Mortezazadeh, Jean-François Cossette, Ashu Dastoor, Jean de Grandpré, Irena Ivanova, and Abdessamad Qaddouri
Geosci. Model Dev., 17, 335–346, https://doi.org/10.5194/gmd-17-335-2024, https://doi.org/10.5194/gmd-17-335-2024, 2024
Short summary
Short summary
The interpolation process is the most computationally expensive step of the semi-Lagrangian (SL) approach. In this paper we implement a new interpolation scheme into the semi-Lagrangian approach which has the same computational cost as a third-order polynomial scheme but with the accuracy of a fourth-order interpolation scheme. This improvement is achieved by using two third-order backward and forward polynomial interpolation schemes in two consecutive time steps.
Boris Gailleton, Luca C. Malatesta, Guillaume Cordonnier, and Jean Braun
Geosci. Model Dev., 17, 71–90, https://doi.org/10.5194/gmd-17-71-2024, https://doi.org/10.5194/gmd-17-71-2024, 2024
Short summary
Short summary
This contribution presents a new method to numerically explore the evolution of mountain ranges and surrounding areas. The method helps in monitoring with details on the timing and travel path of material eroded from the mountain ranges. It is particularly well suited to studies juxtaposing different domains – lakes or multiple rock types, for example – and enables the combination of different processes.
Denise Degen, Daniel Caviedes Voullième, Susanne Buiter, Harrie-Jan Hendricks Franssen, Harry Vereecken, Ana González-Nicolás, and Florian Wellmann
Geosci. Model Dev., 16, 7375–7409, https://doi.org/10.5194/gmd-16-7375-2023, https://doi.org/10.5194/gmd-16-7375-2023, 2023
Short summary
Short summary
In geosciences, we often use simulations based on physical laws. These simulations can be computationally expensive, which is a problem if simulations must be performed many times (e.g., to add error bounds). We show how a novel machine learning method helps to reduce simulation time. In comparison to other approaches, which typically only look at the output of a simulation, the method considers physical laws in the simulation itself. The method provides reliable results faster than standard.
Carlos Spa, Otilio Rojas, and Josep de la Puente
Geosci. Model Dev., 16, 7237–7252, https://doi.org/10.5194/gmd-16-7237-2023, https://doi.org/10.5194/gmd-16-7237-2023, 2023
Short summary
Short summary
This paper develops a calibration methodology of all absorbing techniques typically used by Fourier pseudo-spectral time-domain (PSTD) methods for geoacoustic wave simulations. The main contributions of the paper are (a) an implementation and quantitative comparison of all absorbing techniques available for PSTD methods through a simple and robust numerical experiment, and (b) a validation of these absorbing techniques in several 3-D seismic scenarios with gradual heterogeneity complexities.
Michael Hillier, Florian Wellmann, Eric A. de Kemp, Boyan Brodaric, Ernst Schetselaar, and Karine Bédard
Geosci. Model Dev., 16, 6987–7012, https://doi.org/10.5194/gmd-16-6987-2023, https://doi.org/10.5194/gmd-16-6987-2023, 2023
Short summary
Short summary
Neural networks can be used effectively to model three-dimensional geological structures from point data, sampling geological interfaces, units, and structural orientations. Existing neural network approaches for this type of modelling are advanced by the efficient incorporation of unconformities, new knowledge inputs, and improved data fitting techniques. These advances permit the modelling of more complex geology in diverse geological settings, different-sized areas, and various data regimes.
Ane Lopez de Gamiz-Zearra, Cecilie Hansen, Xavier Corrales, Iñaki Quincoces, Izaskun Preciado, and Eider Andonegi
EGUsphere, https://doi.org/10.5194/egusphere-2023-1368, https://doi.org/10.5194/egusphere-2023-1368, 2023
Short summary
Short summary
This paper describes the development of the first calibrated end-to-end Atlantis model for the Bay of Biscay that will help us improve the comprehension of the spatial functioning of the Bay of Biscay ecosystem and help establishing management measures of human activities. Our results highlighted the importance of lower trophic levels to the pelagic system and demonstrate the importance of having accurate and precise data for biological processes.
Tor Nordam, Ruben Kristiansen, Raymond Nepstad, Erik van Sebille, and Andy M. Booth
Geosci. Model Dev., 16, 5339–5363, https://doi.org/10.5194/gmd-16-5339-2023, https://doi.org/10.5194/gmd-16-5339-2023, 2023
Short summary
Short summary
We describe and compare two common methods, Eulerian and Lagrangian models, used to simulate the vertical transport of material in the ocean. They both solve the same transport problems but use different approaches for representing the underlying equations on the computer. The main focus of our study is on the numerical accuracy of the two approaches. Our results should be useful for other researchers creating or using these types of transport models.
Mathieu Gravey and Grégoire Mariethoz
Geosci. Model Dev., 16, 5265–5279, https://doi.org/10.5194/gmd-16-5265-2023, https://doi.org/10.5194/gmd-16-5265-2023, 2023
Short summary
Short summary
Multiple‐point geostatistics are widely used to simulate complex spatial structures based on a training image. The use of these methods relies on the possibility of finding optimal training images and parametrization of the simulation algorithms. Here, we propose finding an optimal set of parameters using only the training image as input. The main advantage of our approach is to remove the risk of overfitting an objective function.
Siting Li, Ping Wang, Hong Wang, Yue Peng, Zhaodong Liu, Wenjie Zhang, Hongli Liu, Yaqiang Wang, Huizheng Che, and Xiaoye Zhang
Geosci. Model Dev., 16, 4171–4191, https://doi.org/10.5194/gmd-16-4171-2023, https://doi.org/10.5194/gmd-16-4171-2023, 2023
Short summary
Short summary
Optimizing the initial state of atmospheric chemistry model input is one of the most essential methods to improve forecast accuracy. Considering the large computational load of the model, we introduce an ensemble optimal interpolation scheme (EnOI) for operational use and efficient updating of the initial fields of chemical components. The results suggest that EnOI provides a practical and cost-effective technique for improving the accuracy of chemical weather numerical forecasts.
Thomas Richter, Véronique Dansereau, Christian Lessig, and Piotr Minakowski
Geosci. Model Dev., 16, 3907–3926, https://doi.org/10.5194/gmd-16-3907-2023, https://doi.org/10.5194/gmd-16-3907-2023, 2023
Short summary
Short summary
Sea ice covers not only the pole regions but affects the weather and climate globally. For example, its white surface reflects more sunlight than land. The oceans around the poles are therefore kept cool, which affects the circulation in the oceans worldwide. Simulating the behavior and changes in sea ice on a computer is, however, very difficult. We propose a new computer simulation that better models how cracks in the ice change over time and show this by comparing to other simulations.
Emma J. MacKie, Michael Field, Lijing Wang, Zhen Yin, Nathan Schoedl, Matthew Hibbs, and Allan Zhang
Geosci. Model Dev., 16, 3765–3783, https://doi.org/10.5194/gmd-16-3765-2023, https://doi.org/10.5194/gmd-16-3765-2023, 2023
Short summary
Short summary
Earth scientists often have to fill in spatial gaps in measurements. This gap-filling or interpolation can be accomplished with geostatistical methods, where the statistical relationships between measurements are used to inform how these gaps should be filled. Despite the broad utility of these methods, there are few freely available geostatistical software applications. We present GStatSim, a Python package for performing different geostatistical interpolation methods.
Ian Madden, Simone Marras, and Jenny Suckale
Geosci. Model Dev., 16, 3479–3500, https://doi.org/10.5194/gmd-16-3479-2023, https://doi.org/10.5194/gmd-16-3479-2023, 2023
Short summary
Short summary
To aid risk managers who may wish to rapidly assess tsunami risk but may lack high-performance computing infrastructure, we provide an accessible software package able to rapidly model tsunami inundation over real topography by leveraging Google's Tensor Processing Unit, a high-performance hardware. Minimally trained users can take advantage of the rapid modeling abilities provided by this package via a web browser thanks to the ease of use of Google Cloud Platform.
Youtong Rong, Paul Bates, and Jeffrey Neal
Geosci. Model Dev., 16, 3291–3311, https://doi.org/10.5194/gmd-16-3291-2023, https://doi.org/10.5194/gmd-16-3291-2023, 2023
Short summary
Short summary
A novel subgrid channel (SGC) model is developed for river–floodplain modelling, allowing utilization of subgrid-scale bathymetric information while performing computations on relatively coarse grids. By including adaptive artificial diffusion, potential numerical instability, which the original SGC solver had, in low-friction regions such as urban areas is addressed. Evaluation of the new SGC model through structured tests confirmed that the accuracy and stability have improved.
Xiaqiong Zhou and Hann-Ming Henry Juang
Geosci. Model Dev., 16, 3263–3274, https://doi.org/10.5194/gmd-16-3263-2023, https://doi.org/10.5194/gmd-16-3263-2023, 2023
Short summary
Short summary
The National Centers for Environmental Prediction Global Forecast System version 16 experienced model instability failures in real-time runs resolved by increasing the minimum thickness depth parameter. Further investigation revealed that the issue was caused by the advection of geopotential heights at the model's layer interfaces. By replacing high-order boundary conditions with zero-gradient boundary conditions for interface-wind reconstruction, the instability was effectively addressed.
Grant T. Euen, Shangxin Liu, Rene Gassmöller, Timo Heister, and Scott D. King
Geosci. Model Dev., 16, 3221–3239, https://doi.org/10.5194/gmd-16-3221-2023, https://doi.org/10.5194/gmd-16-3221-2023, 2023
Short summary
Short summary
Due to the increasing availability of high-performance computing over the past few decades, numerical models have become an important tool for research. Here we test two geodynamic codes that produce such models: ASPECT, a newer code, and CitcomS, an older one. We show that they produce solutions that are extremely close. As methods and codes become more complex over time, showing reproducibility allows us to seamlessly link previously known information to modern methodologies.
Cited articles
Andrysco, M., Jhala, R., and Lerner, S.: Printing floating-point numbers: a
faster, always correct method, Proceedings of the 43rd Annual ACM SIGPLAN-SIGACT Symposium on Principles of Programming Languages, 51, 555–567,
https://doi.org/10.1145/2837614.2837654, 2016.
Arteaga, A., Fuhrer, O., and Hoefler, T.: Designing Bit-Reproducible
Portable High-Performance Applications, 2014 IEEE International Parallel
& Distributed Processing Symposium (IPDPS), USA, 1235–1244,
https://doi.org/10.1109/IPDPS.2014.127, 2014.
Bailey, D. H.: Resolving numerical anomalies in scientific computation,
Lawrence Berkeley National Laboratory, University of California, USA, https://escholarship.org/uc/item/2qf8v4bn (last access: 30 August 2022), 2008.
Baker, A. H., Hammerling, D. M., Levy, M. N., Xu, H., Dennis, J. M., Eaton, B. E., Edwards, J., Hannay, C., Mickelson, S. A., Neale, R. B., Nychka, D., Shollenberger, J., Tribbia, J., Vertenstein, M., and Williamson, D.: A new ensemble-based consistency test for the Community Earth System Model (pyCECT v1.0), Geosci. Model Dev., 8, 2829–2840, https://doi.org/10.5194/gmd-8-2829-2015, 2015.
Donahue, A. S. and Caldwell, P. M.: Impact of Physics Parameterization
Ordering in A Global Atmosphere Model, J. Adv. Model. Earth Sy., 10, 481–499,
https://doi.org/10.1002/2017MS001067, 2018.
Düben, P. D., Joven, J., Lingamneni, A., McNamara, H., Micheli, G. D.,
Palem, K. V., and Palmer, T. N.: On the use of inexact, pruned hardware in
atmospheric modelling, Phil. Trans. R. Soc. A, 372, 20130276, https://doi.org/10.1098/rsta.2013.0276, 2014.
Düben, P. D., Subramanian, A., Dawson, A., and Palmer T. N.: A study of
reduced numerical precision to make superparametrisation more competitive using a hardware emulator in the
OpenIFS model, J. Adv. Model. Earth Sy., 9, 566–584,
https://doi.org/10.1002/2016MS000862, 2017.
Emanuel, K. A. and Živković-Rothman, M.: Development and evaluation
of a convection scheme for use in climate models, J. Atmos. Sci., 56,
1766–1782, https://doi.org/10.1175/1520-0469(1999)056<1766:DAEOAC>2.0.CO;2, 1999.
Flato, G. M.: Earth system models: an overview, WIREs Clim. Change, 2,
783–800, https://doi.org/10.1002/wcc.148, 2011.
Fu, H., Liao, J., Yang, J., Wang, L., Song, Z., Huang, X., Yang, C., Xue,
W., Liu, F., Qiao, F., Zhao, W., Yin, X., Hou, C., Zhang, C., Ge, W., Zhang,
J., Wang, Y., Zhou, C., and Yang, G.: The sunway TaihuLight supercomputer:
system and applications, Sci. China Inf. Sci., 59, 072001,
https://doi.org/10.1007/s11432-016-5588-7, 2016.
Fu, H., Liao, J., Ding, N., Duan, X., Gan, L., Liang, Y., Wang, X., Yang,
J., Zheng, Y., Liu, W., Wang, L., and Yang, G.: Redesigning cam-se for
peta-scale climate modeling performance and ultra-high resolution on sunway
taihulight, In Proceedings of the international conference for high
performance computing, networking, storage and analysis, Association for Computing Machinery, https://doi.org/10.1145/3126908.3126909, 2017a.
Fu, H., Liao, J., Xue, W., Wang, L., Chen, D., Gu, L., Xu, J., Ding, N.,
Wang, X., He, C., Xu, S., Liang, Y., Fang, J., Xu, Y., Zheng, W., Xu, J.,
Zheng, Z., Wei, W., Ji, X., Zhang, H., Chen, B., Li, K., Huang, X., Chen,
W., and Yang, G.: Refactoring and optimizing the community atmosphere model
(CAM) on the sunway taihu-light supercomputer, in: High performance
computing, networking, storage and analysis, International Conference for High Performance Computing, Networking, Storage and Analysis, https://doi.org/10.1109/SC.2016.82, 2017b.
Fuhrer, O., Chadha, T., Hoefler, T., Kwasniewski, G., Lapillonne, X., Leutwyler, D., Lüthi, D., Osuna, C., Schär, C., Schulthess, T. C., and Vogt, H.: Near-global climate simulation at 1 km resolution: establishing a performance baseline on 4888 GPUs with COSMO 5.0, Geosci. Model Dev., 11, 1665–1681, https://doi.org/10.5194/gmd-11-1665-2018, 2018.
Goff, J. and Gratch, S: List 1947, Smithsonian Meteorological Tables, Trans.
Am. Soc., 52, 95, 1946.
Kara, A. B., Rochford P. A., and Hurlburt H. E.: An optimal definition for
ocean mixed layer depth, J. Geophys. Res.-Oceans, 105, 16803–16821,
https://doi.org/10.1029/2000JC900072, 2000.
Kelly, R. C.: GPU Computing for Atmospheric Modeling, Comput. Sci. Eng., 12,
26–33, https://doi.org/10.1109/MCSE.2010.26, 2010.
Li, S., Zhang, S., Liu, Z., Yang, X. Rosati, A., Golaz, J. C., and Zhao, M.:
The Role of Large-scale Feedbacks in Cumulus Convection Parameter
Estimation, J. Climate, 29, 4099–4119, https://doi.org/10.1175/JCLI-D-15-0117.1,
2016.
Liao, X., Xiao, L., Yang, C., and Lu, Y.: Milkyway-2 supercomputer: system
and application, Front. Comput. Sci., 8, 345–356,
https://doi.org/10.1007/s11704-014-3501-3, 2014.
Linford, J. C., Michalakes, J., Vachharajani, M., and Sandu, A.: Multi-core
acceleration of chemical kinetics for simulation and prediction, in: High
performance computing networking, storage and analysis, International Conference for High Performance Computing Networking, Storage and Analysis, 1–11, https://doi.org/10.1145/1654059.1654067, 2009.
Mielikainen, J., Huang, B., Wang, J., Huang, H.-L. A., and Goldberg, M. D.:
Compute unified device architecture (CUDA)-based parallelization of WRF
Kessler cloud microphysics scheme, Comput. Geosci.-UK, 52, 292–299,
https://doi.org/10.1016/j.cageo.2012.10.006, 2013.
Milroy, D. J., Baker, A. H., Hammerling, D. M., Dennis, J. M., Mickelson, S.
A., and Jessup, E. R.: Towards Characterizing the Variability of
Statistically Consistent Community Earth System Model Simulations, Pro.
Comput. Sci., 80, 1589–1600, https://doi.org/10.1016/j.procs.2016.05.489,
2016.
Morrison, H. and Gettelman, A.: A new two-moment bulk stratiform cloud
microphysics scheme in the Community Atmosphere Model, version 3 (CAM3).
Part I: Description and numerical tests, J. Climate, 21, 3642–3659,
https://doi.org/10.1175/2008JCLI2105.1, 2008.
Neale, R. B., Richter, J. H., and Jochum, M.: The impact of convection on
ENSO: From a delayed oscillator to a series of events, J. Climate, 21,
5904–5924, https://doi.org/10.1175/2008JCLI2244.1, 2008.
Palem, K. and Lingamneni, A.: Ten Years of Building Broken Chips: The
Physics and Engineering of Inexact Computing, ACM T. Embed.
Comput. S., 12, 1–23, https://doi.org/10.1145/2465787.2465789,
2013.
Park, S., Bretherton, C. S., and Rasch, P. J.: Integrating Cloud Processes
in the Community Atmosphere Model, Version 5, J. Climate, 27, 6821–6856,
https://doi.org/10.1175/JCLI-D-14-00087.1, 2014.
Rosinski, J. M. and Williamson, D. L.: The accumulation of rounding errors
and port validation for global atmospheric models, SIAM J. Sci. Comput., 18,
552–564, https://doi.org/10.1137/S1064827594275534, 1997.
Sansom, P. G., Stephenson, D. B., Ferro, C. A. T., Zappa, G., and Shaffery,
L.: Simple uncertainty frameworks for selecting weighting schemes and
interpreting multimodel ensemble climate change experiments, J. Climate, 26,
4017–4037, https://doi.org/10.1175/JCLI-D-12-00462.1, 2013.
Stephenson, M., Hari, S. K. S., Lee, Y., Ebrahimi, E., Johnson, D. R.,
Nellans, D., O'Connor, M., and Keckler, S. W.: Flexible Software Profiling
of GPU Architectures, ACM SIGARCH Comp. Architecture News, 43, 185–197, 2015.
Sun, W. Y. and Ogura, Y.: Modeling the Evolution of the Convective Planetary
Boundary Layer, J. Atmos. Sci., 37, 1558–1572,
https://doi.org/10.1175/1520-0469(1980)037<1558:MTEOTC>2.0.CO;2, 1980.
Tintó Prims, O., Acosta, M. C., Moore, A. M., Castrillo, M., Serradell, K., Cortés, A., and Doblas-Reyes, F. J.: How to use mixed precision in ocean models: exploring a potential reduction of numerical precision in NEMO 4.0 and ROMS 3.6, Geosci. Model Dev., 12, 3135–3148, https://doi.org/10.5194/gmd-12-3135-2019, 2019.
Vazhkudai, S. S., de Supinski, B. R., Bland, A. S., Geist, A., Sexton, J.,
Kahle, J., Zimmer, C. J., Atchley, S., Oral, S., Maxwell, D. E., Vergara
Larrea, V. G., Bertsch, A., Goldstone, R., Joubert, W., Chambreau, C.,
Appelhans, D., Blackmore, R., Casses, B., Chochia, G., Davison, G., Ezell,
M. A., Gooding, T., Gonsiorowski, E., Grinberg, L., Hanson, B., Hartner, B.,
Karlin, I., Leininger, M. L., Leverman, D., Marroquin, C., Moody, A.,
Ohmacht, M., Pankajakshan, R., Pizzano, F., Rogers, J. H., Rosenburg, B.,
Schmidt, D., Shankar, M., Wang, F., Watson, P., Walkup, B., Weems, L. D.,
and Yin, J.: The design, deployment, and evaluation of the coral
pre-exascale systems, in: International Conference for High Performance Computing, Networking, Storage and Analysis, USA, https://doi.org/10.1109/SC.2018.00055, 2018.
Wang, M. and Zhang, G. J.: Improving the Simulation of Tropical Convective
Cloud-Top Heights in CAM5 with CloudSat Observations, J. Climate, 31, 5189–5204,
https://doi.org/10.1175/JCLI-D-18-0027.1, 2018.
Whitehead, N. and Fit-Florea, A.: Precision & Performance: Floating
Point and IEEE 754 Compliance for NVIDIA GPUs,
https://developer.nvidia.com/sites/default/files/akamai/cuda/files/NVIDIA-CUDA-Floating-Point.pdf (last access: 27 August 2022),
2011.
Xiao, H., Sun, J., Bian, X., and Dai, Z.: GPU acceleration of the WSM6 cloud
microphysics scheme in GRAPES model, Comput. Geosci., 59, 156–162,
https://doi.org/10.1016/j.cageo.2013.06.016, 2013.
Xu, S., Huang, X., Oey, L.-Y., Xu, F., Fu, H., Zhang, Y., and Yang, G.: POM.gpu-v1.0: a GPU-based Princeton Ocean Model, Geosci. Model Dev., 8, 2815–2827, https://doi.org/10.5194/gmd-8-2815-2015, 2015.
Yano, J. I.: Subgrid-scale physical parameterization in atmospheric
modeling: How can we make it consistent?, J. Phys. A-Math. Theor., 49, 284001,
https://doi.org/10.1088/1751-8113/49/28/284001, 2016.
Yu, Y., Zhang, S., Fu, H., Wu, L., Chen, D., Gao, Y., Wei, Z., Jia, D., and Lin, X.: Data and Codes of Characterizing Uncertainties of Earth System Modeling with Heterogeneous Many-core Architecture Computing, Zenodo [data set], https://doi.org/10.5281/zenodo.6481868, 2022.
Zhang, G. J. and McFarlane, N. A.: Sensitivity of climate simulations to
the parameterization of cumulus convection in the Canadian climate centre
general circulation model, Atmos. Ocean, 33, 407–446,
https://doi.org/10.1080/07055900.1995.9649539, 1995.
Zhang, S., Fu, H., Wu, L., Li, Y., Wang, H., Zeng, Y., Duan, X., Wan, W., Wang, L., Zhuang, Y., Meng, H., Xu, K., Xu, P., Gan, L., Liu, Z., Wu, S., Chen, Y., Yu, H., Shi, S., Wang, L., Xu, S., Xue, W., Liu, W., Guo, Q., Zhang, J., Zhu, G., Tu, Y., Edwards, J., Baker, A., Yong, J., Yuan, M., Yu, Y., Zhang, Q., Liu, Z., Li, M., Jia, D., Yang, G., Wei, Z., Pan, J., Chang, P., Danabasoglu, G., Yeager, S., Rosenbloom, N., and Guo, Y.: Optimizing high-resolution Community Earth System Model on a heterogeneous many-core supercomputing platform, Geosci. Model Dev., 13, 4809–4829, https://doi.org/10.5194/gmd-13-4809-2020, 2020.
Short summary
To understand the scientific consequence of perturbations caused by slave cores in heterogeneous computing environments, we examine the influence of perturbation amplitudes on the determination of the cloud bottom and cloud top and compute the probability density function (PDF) of generated clouds. A series of comparisons of the PDFs between homogeneous and heterogeneous systems show consistently acceptable error tolerances when using slave cores in heterogeneous computing environments.
To understand the scientific consequence of perturbations caused by slave cores in heterogeneous...
