Articles | Volume 15, issue 17
https://doi.org/10.5194/gmd-15-6695-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-15-6695-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Methods for assessment of models
| 
05 Sep 2022
Methods for assessment of models |
| 05 Sep 2022
| 05 Sep 2022
Characterizing uncertainties of Earth system modeling with heterogeneous many-core architecture computing
Yangyang Yu
Key Laboratory of Physical Oceanography, Ministry of Education/Institute for Advanced Ocean Study/Frontiers Science Center for Deep Ocean Multispheres and Earth System (DOMES), Ocean University of China, Qingdao
266100, China
College of Oceanic and Atmospheric Sciences, Ocean University of
China, Qingdao 266100, China
Shaoqing Zhang
CORRESPONDING AUTHOR
Key Laboratory of Physical Oceanography, Ministry of Education/Institute for Advanced Ocean Study/Frontiers Science Center for Deep Ocean Multispheres and Earth System (DOMES), Ocean University of China, Qingdao
266100, China
College of Oceanic and Atmospheric Sciences, Ocean University of
China, Qingdao 266100, China
Pilot National Laboratory for Marine Science and Technology, Qingdao 266100, China
Haohuan Fu
CORRESPONDING AUTHOR
Ministry of Education Key Laboratory for Earth System Modeling/Department of Earth System Science, Tsinghua University, Beijing 100084,
China
National Supercomputing Center in Wuxi, Wuxi 214072, China
Lixin Wu
CORRESPONDING AUTHOR
Key Laboratory of Physical Oceanography, Ministry of Education/Institute for Advanced Ocean Study/Frontiers Science Center for Deep Ocean Multispheres and Earth System (DOMES), Ocean University of China, Qingdao
266100, China
College of Oceanic and Atmospheric Sciences, Ocean University of
China, Qingdao 266100, China
Pilot National Laboratory for Marine Science and Technology, Qingdao 266100, China
Dexun Chen
CORRESPONDING AUTHOR
National Supercomputing Center in Wuxi, Wuxi 214072, China
Pilot National Laboratory for Marine Science and Technology, Qingdao 266100, China
Key Laboratory of Marine Environmental Science and Ecology, Ministry of Education/Frontiers Science Center for Deep
Ocean Multispheres and Earth System (DOMES), Ocean University of China, Qingdao 266100, China
Zhiqiang Wei
Pilot National Laboratory for Marine Science and Technology, Qingdao 266100, China
Dongning Jia
Pilot National Laboratory for Marine Science and Technology, Qingdao 266100, China
Xiaopei Lin
Key Laboratory of Physical Oceanography, Ministry of Education/Institute for Advanced Ocean Study/Frontiers Science Center for Deep Ocean Multispheres and Earth System (DOMES), Ocean University of China, Qingdao
266100, China
College of Oceanic and Atmospheric Sciences, Ocean University of
China, Qingdao 266100, China
Pilot National Laboratory for Marine Science and Technology, Qingdao 266100, China
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Jiangyu Li and Shaoqing Zhang
Geosci. Model Dev., 13, 1035–1054, https://doi.org/10.5194/gmd-13-1035-2020, https://doi.org/10.5194/gmd-13-1035-2020, 2020
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Mingchen Ma, Yang Gao, Yuhang Wang, Shaoqing Zhang, L. Ruby Leung, Cheng Liu, Shuxiao Wang, Bin Zhao, Xing Chang, Hang Su, Tianqi Zhang, Lifang Sheng, Xiaohong Yao, and Huiwang Gao
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Juntao Wang, Yanjie Shen, Kai Li, Yang Gao, Huiwang Gao, and Xiaohong Yao
Atmos. Chem. Phys., 19, 8845–8861, https://doi.org/10.5194/acp-19-8845-2019, https://doi.org/10.5194/acp-19-8845-2019, 2019
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Junxi Zhang, Yang Gao, L. Ruby Leung, Kun Luo, Huan Liu, Jean-Francois Lamarque, Jianren Fan, Xiaohong Yao, Huiwang Gao, and Tatsuya Nagashima
Atmos. Chem. Phys., 19, 887–900, https://doi.org/10.5194/acp-19-887-2019, https://doi.org/10.5194/acp-19-887-2019, 2019
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ACCMIP simulations were used to study NOy deposition over East Asia in the future. Both dry and wet NOy deposition show significant decreases in the 2100s under RCP4.5 and RCP8.5 due to large anthropogenic emission reduction. The changes in climate only significantly affect the wet deposition primarily linked to changes in precipitation. Over the coastal seas of China, weaker transport of NOy from land due to emission reduction infers a larger impact from shipping and lightning emissions.
Ge Zhang, Yang Gao, Wenju Cai, L. Ruby Leung, Shuxiao Wang, Bin Zhao, Minghuai Wang, Huayao Shan, Xiaohong Yao, and Huiwang Gao
Atmos. Chem. Phys., 19, 565–576, https://doi.org/10.5194/acp-19-565-2019, https://doi.org/10.5194/acp-19-565-2019, 2019
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Based on observed data, this study reveals a distinct seesaw feature of abnormally high and low PM2.5 concentrations in December 2015 and January 2016 over North China. The mechanism of the seesaw pattern was found to be linked to a super El Niño and the Arctic Oscillation (AO). During the mature phase of El Niño in December 2015, the weakened East Asian winter monsoon favors strong haze formation; however, the circulation pattern was reversed in the next month due to the phase change of the AO.
Yujiao Zhu, Kai Li, Yanjie Shen, Yang Gao, Xiaohuan Liu, Yang Yu, Huiwang Gao, and Xiaohong Yao
Atmos. Chem. Phys., 19, 89–113, https://doi.org/10.5194/acp-19-89-2019, https://doi.org/10.5194/acp-19-89-2019, 2019
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In this paper, we investigate new particle formation (NPF) events during seven cruises. NPF events were observed on 25 days and were most likely associated with the long-range transport of anthropogenic air pollutants. The relationship between the net generated amount of new particles and their apparent formation rate is established and explained in terms of the roles of different vapor precursors. The survival probability of new particles to CCN size is also discussed.
Junxi Zhang, Yang Gao, Kun Luo, L. Ruby Leung, Yang Zhang, Kai Wang, and Jianren Fan
Atmos. Chem. Phys., 18, 9861–9877, https://doi.org/10.5194/acp-18-9861-2018, https://doi.org/10.5194/acp-18-9861-2018, 2018
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We used a regional model to investigate the impact of atmosphere with high temperature and low wind speed on ozone concentration. When these compound events (heat waves and stagnant weather) occur simultaneously, a striking ozone enhancement is revealed. This type of compound event is projected to increase more dominantly compared to single events in the future over the US, Europe, and China, implying the importance of reducing emissions in order to alleviate the impact from the compound events.
Pei Hou, Shiliang Wu, Jessica L. McCarty, and Yang Gao
Atmos. Chem. Phys., 18, 8173–8182, https://doi.org/10.5194/acp-18-8173-2018, https://doi.org/10.5194/acp-18-8173-2018, 2018
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Atmospheric aerosols can be affected not only by emissions, but also meteorology, in particular precipitation. Analyses of the historical meteorological data based on multiple datasets show significant changes in precipitation characteristics, including precipitation intensity and frequency, over various regions around the world. We find that the precipitation changes over the past 30 years can easily lead to perturbations in atmospheric aerosols by 10 % or higher at the regional scale.
Zhi-zhen Ni, Kun Luo, Yang Gao, Fei Jiang, Xiang Gao, Jian-ren Fan, and Chang-hong Chen
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2018-76, https://doi.org/10.5194/acp-2018-76, 2018
Revised manuscript not accepted
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A unique mechanism was found to modulate the high ozone episodes in Hangzhou during G20 summit: Driven by tropical cyclone convergence, prevailing north winds brought in emission sources; with invasion of tropical cycle, subsidence air and stagnant weather was induced, as well as the urban heat island effect, intensifying the ozone enhancement. Different atmospheric processes were further analyzed to elucidate the control factors of ozone formation through integrated process rate method.
Chengzhi Xing, Cheng Liu, Shanshan Wang, Ka Lok Chan, Yang Gao, Xin Huang, Wenjing Su, Chengxin Zhang, Yunsheng Dong, Guangqiang Fan, Tianshu Zhang, Zhenyi Chen, Qihou Hu, Hang Su, Zhouqing Xie, and Jianguo Liu
Atmos. Chem. Phys., 17, 14275–14289, https://doi.org/10.5194/acp-17-14275-2017, https://doi.org/10.5194/acp-17-14275-2017, 2017
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Vertical profiles of the aerosol extinction coefficient and NO2 and HCHO concentrations were retrieved from MAX-DOAS measurement, while vertical distribution of O3 was obtained using ozone lidar. The measured O3 vertical distribution indicates that the ozone production not only occurs at surface level but also at higher altitudes (about 1.1 km), which are not directly related to horizontal and vertical transportation but are mainly influenced by the abundance of VOCs in the lower troposphere.
Yuxin Zhao, Xiong Deng, Shaoqing Zhang, Zhengyu Liu, Chang Liu, Gabriel Vecchi, Guijun Han, and Xinrong Wu
Nonlin. Processes Geophys., 24, 681–694, https://doi.org/10.5194/npg-24-681-2017, https://doi.org/10.5194/npg-24-681-2017, 2017
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Here with a simple coupled model that simulates typical scale interactions in the climate system, we study the optimal OTWs for the coupled media so that climate signals can be most accurately recovered by CDA. Results show that an optimal OTW determined from the de-correlation timescale provides maximal observational information that best fits the characteristic variability of the coupled medium during the data blending process.
Yujiao Zhu, Caiqing Yan, Renyi Zhang, Zifa Wang, Mei Zheng, Huiwang Gao, Yang Gao, and Xiaohong Yao
Atmos. Chem. Phys., 17, 9469–9484, https://doi.org/10.5194/acp-17-9469-2017, https://doi.org/10.5194/acp-17-9469-2017, 2017
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This study reports the distinct effects of street canyons on new particle formation (NPF) under warm or cold ambient temperature conditions because of on-road vehicle emissions; i.e., stronger condensation sinks are responsible for the reduced NPF in the springtime, but efficient nucleation and partitioning of gaseous species contribute to the enhanced NPF in the wintertime. The oxidization of biogenic organics is suggested to play an important role in growing new particles.
Xiaolin Yu, Shaoqing Zhang, Xiaopei Lin, and Mingkui Li
Nonlin. Processes Geophys., 24, 125–139, https://doi.org/10.5194/npg-24-125-2017, https://doi.org/10.5194/npg-24-125-2017, 2017
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Parameter estimation (PE) with a global coupled data assimilation (CDA) system can improve the runs, but the improvement remains in a limited range. We have to come back to simple models to sort out the sources of noises. Incomplete observations and the chaotic nature of the atmosphere have much stronger influences on the PE through the state estimation (SE) process. Here, we propose the guidelines of how to enhance the signal-to-noise ratio under partial SE status.
Xiaomeng Huang, Qiang Tang, Yuheng Tseng, Yong Hu, Allison H. Baker, Frank O. Bryan, John Dennis, Haohuan Fu, and Guangwen Yang
Geosci. Model Dev., 9, 4209–4225, https://doi.org/10.5194/gmd-9-4209-2016, https://doi.org/10.5194/gmd-9-4209-2016, 2016
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Refining model resolution is helpful for representing climate processes. With resolution increasing, the computational cost will become very huge. We designed a new solver to accelerate the high-resolution ocean simulation so as to reduce the computational cost and make full use of the computing resource of supercomputers. Our results show that the simulation speed of the improved ocean component with 0.1° resolution achieves 10.5 simulated years per wall-clock day on 16875 CPU cores.
S. Xu, X. Huang, L.-Y. Oey, F. Xu, H. Fu, Y. Zhang, and G. Yang
Geosci. Model Dev., 8, 2815–2827, https://doi.org/10.5194/gmd-8-2815-2015, https://doi.org/10.5194/gmd-8-2815-2015, 2015
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In this paper, we redesign the mpiPOM with GPUs. Specifically, we first convert the model from its original Fortran form to a new CUDA-C version, POM.gpu-v1.0. Then we optimize the code on each of the GPUs, the communications between the GPUs, and the I/O between the GPUs and the CPUs.
We show that the performance of the new model on a workstation containing 4 GPUs is comparable to that on a powerful cluster with 408 standard CPU cores, and it reduces the energy consumption by a factor of 6.8.
G.-J. Han, X.-F. Zhang, S. Zhang, X.-R. Wu, and Z. Liu
Nonlin. Processes Geophys., 21, 357–366, https://doi.org/10.5194/npg-21-357-2014, https://doi.org/10.5194/npg-21-357-2014, 2014
Related subject area
Numerical methods
CLAQC v1.0 – Country Level Air Quality Calculator: an empirical modeling approach
Hydro-geomorphological modelling of leaky wooden dam efficacy from reach to catchment scale with CAESAR-Lisflood 1.9j
Enhancing single precision with quasi-double precision: achieving double-precision accuracy in the Model for Prediction Across Scales – Atmosphere (MPAS-A) version 8.2.1
Advances in land surface forecasting: a comparison of LSTM, gradient boosting, and feed-forward neural networks as prognostic state emulators in a case study with ecLand
Subgrid corrections for the linear inertial equations of a compound flood model – a case study using SFINCS 2.1.1 Dollerup release
Introducing Iterative Model Calibration (IMC) v1.0: a generalizable framework for numerical model calibration with a CAESAR-Lisflood case study
Development of a high-order global dynamical core using the discontinuous Galerkin method for an atmospheric large-eddy simulation (LES) and proposal of test cases: SCALE-DG v0.8.0
A joint reconstruction and model selection approach for large-scale linear inverse modeling (msHyBR v2)
Assimilation of snow water equivalent from AMSR2 and IMS satellite data utilizing the local ensemble transform Kalman filter
The Paleochrono-1.1 probabilistic model to derive a common age model for several paleoclimatic sites using absolute and relative dating constraints
asQ: parallel-in-time finite element simulations using ParaDiag for geoscientific models and beyond
Explicit stochastic advection algorithms for the regional-scale particle-resolved atmospheric aerosol model WRF-PartMC (v1.0)
Potential based Thermodynamics with Consistent Conservative Cascade Transport for Implicit Large Eddy Simulation: PTerodaC3TILES version 1.0
The Measurement Error Proxy System Model: MEPSM v0.2
Numerical stabilization methods for level-set-based ice front migration
Modelling chemical advection during magma ascent
Consistent point data assimilation in Firedrake and Icepack
A computationally efficient parameterization of aerosol, cloud and precipitation pH for application at global and regional scale (EQSAM4Clim-v12)
Assessing the benefits of approximately exact step sizes for Picard and Newton solver in simulating ice flow (FEniCS-full-Stokes v.1.3.2)
Assessing effects of climate and technology uncertainties in large natural resource allocation problems
VISIR-2: ship weather routing in Python
Incremental analysis update (IAU) in the Model for Prediction Across Scales coupled with the Joint Effort for Data assimilation Integration (MPAS–JEDI 2.0.0)
Decision-making strategies implemented in SolFinder 1.0 to identify eco-efficient aircraft trajectories: application study in AirTraf 3.0
Developing meshing workflows in Gmsh v4.11 for the geologic uncertainty assessment of high-temperature aquifer thermal energy storage
Development and preliminary validation of a land surface image assimilation system based on the Common Land Model
NorSand4AI: a comprehensive triaxial test simulation database for NorSand constitutive model materials
ParticleDA.jl v.1.0: a distributed particle-filtering data assimilation package
HETerogeneous vectorized or Parallel (HETPv1.0): an updated inorganic heterogeneous chemistry solver for the metastable-state NH4+–Na+–Ca2+–K+–Mg2+–SO42−–NO3−–Cl−–H2O system based on ISORROPIA II
Three-dimensional geological modelling of igneous intrusions in LoopStructural v1.5.10
Estimating volcanic ash emissions using retrieved satellite ash columns and inverse ash transport modeling using VolcanicAshInversion v1.2.1, within the operational eEMEP (emergency European Monitoring and Evaluation Programme) volcanic plume forecasting system (version rv4_17)
Accounting for uncertainties in forecasting tropical-cyclone-induced compound flooding
An automatic mesh generator for coupled 1D–2D hydrodynamic models
Numerical coupling of aerosol emissions, dry removal, and turbulent mixing in the E3SM Atmosphere Model version 1 (EAMv1) – Part 1: Dust budget analyses and the impacts of a revised coupling scheme
Numerical coupling of aerosol emissions, dry removal, and turbulent mixing in the E3SM Atmosphere Model version 1 (EAMv1) – Part 2: A semi-discrete error analysis framework for assessing coupling schemes
jsmetrics v0.2.0: a Python package for metrics and algorithms used to identify or characterise atmospheric jet streams
P3D-BRNS v1.0.0: a three-dimensional, multiphase, multicomponent, pore-scale reactive transport modelling package for simulating biogeochemical processes in subsurface environments
MinVoellmy v1: a lightweight model for simulating rapid mass movements based on a modified Voellmy rheology
Scalable Feature Extraction and Tracking (SCAFET): a general framework for feature extraction from large climate data sets
Sweep interpolation: a cost-effective semi-Lagrangian scheme in the Global Environmental Multiscale model
CHONK 1.0: landscape evolution framework: cellular automata meets graph theory
Perspectives of physics-based machine learning strategies for geoscientific applications governed by partial differential equations
Calibration of absorbing boundary layers for geoacoustic wave modeling in pseudo-spectral time-domain methods
GeoINR 1.0: an implicit neural network approach to three-dimensional geological modelling
Parameterization and tuning of the Bay of Biscay Atlantis model v1
A comparison of Eulerian and Lagrangian methods for vertical particle transport in the water column
AutoQS v1: automatic parametrization of QuickSampling based on training images analysis
Implementation and application of ensemble optimal interpolation on an operational chemistry weather model for improving PM2.5 and visibility predictions
A dynamical core based on a discontinuous Galerkin method for higher-order finite-element sea ice modeling
GStatSim V1.0: a Python package for geostatistical interpolation and conditional simulation
Leveraging Google's Tensor Processing Units for tsunami-risk mitigation planning in the Pacific Northwest and beyond
Stefania Renna, Francesco Granella, Lara Aleluia Reis, and Paulina Schulz-Antipa
Geosci. Model Dev., 18, 2373–2408, https://doi.org/10.5194/gmd-18-2373-2025, https://doi.org/10.5194/gmd-18-2373-2025, 2025
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The Country Level Air Quality Calculator (CLAQC) is a new fast modeling tool that predicts globally country-level monthly and annual concentrations of two major air pollutants, fine particulate matter (PM2.5) and tropospheric ozone (O3). It was designed to inform national and regional climate and pollution mitigation policies. It is easy to use and computationally efficient, allowing for the simulation of a large number of emission scenarios for policy assessments and optimization frameworks.
Joshua M. Wolstenholme, Christopher J. Skinner, David Milan, Robert E. Thomas, and Daniel R. Parsons
Geosci. Model Dev., 18, 1395–1411, https://doi.org/10.5194/gmd-18-1395-2025, https://doi.org/10.5194/gmd-18-1395-2025, 2025
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Leaky wooden dams are a type of natural flood management intervention that aims to reduce flood risk downstream by temporarily holding back water during a storm event and releasing it afterwards. These structures alter the river hydrology, and therefore the geomorphology, yet often this is excluded from numerical models. Here we show that by not simulating geomorphology, we are currently underestimating the efficacy of these structures to reduce the flood peak and store water.
Jiayi Lai, Lanning Wang, Qizhong Wu, Yizhou Yang, and Fang Wang
Geosci. Model Dev., 18, 1089–1102, https://doi.org/10.5194/gmd-18-1089-2025, https://doi.org/10.5194/gmd-18-1089-2025, 2025
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High-performance computing limitations often hinder numerical model development. Traditional models use double precision for accuracy, which is computationally expensive. Lower precision reduces costs but can introduce errors. The quasi-double-precision (QDP) algorithm helps mitigate these errors. This study applies the QDP algorithm to the Model for Prediction Across Scales – Atmosphere, showing reduced errors and computational time, making it an efficient solution for large-scale simulations.
Marieke Wesselkamp, Matthew Chantry, Ewan Pinnington, Margarita Choulga, Souhail Boussetta, Maria Kalweit, Joschka Bödecker, Carsten F. Dormann, Florian Pappenberger, and Gianpaolo Balsamo
Geosci. Model Dev., 18, 921–937, https://doi.org/10.5194/gmd-18-921-2025, https://doi.org/10.5194/gmd-18-921-2025, 2025
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We compared spatiotemporal forecasts of three machine learning models that learned water and energy
states on the land surface from a physical model scheme. The forecasting models were developed with reanalysis data and simulations on a European scale and transferred to the globe. We found that all approaches deliver highly accurate approximations of the physical dynamic at long time horizons, implying their usefulness to advance land surface forecasting with synthetic data.
states on the land surface from a physical model scheme. The forecasting models were developed with reanalysis data and simulations on a European scale and transferred to the globe. We found that all approaches deliver highly accurate approximations of the physical dynamic at long time horizons, implying their usefulness to advance land surface forecasting with synthetic data.
Maarten van Ormondt, Tim Leijnse, Roel de Goede, Kees Nederhoff, and Ap van Dongeren
Geosci. Model Dev., 18, 843–861, https://doi.org/10.5194/gmd-18-843-2025, https://doi.org/10.5194/gmd-18-843-2025, 2025
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Accurate flood risk assessments are crucial for storm protection. To achieve efficiency, computational costs must be minimized. This paper introduces a novel subgrid approach for linear inertial equations (LIEs) with bed level and friction variations, implemented in the Super-Fast INundation of CoastS (SFINCS) model. Pre-processed lookup tables enhance simulation precision with lower costs. Validations show significant accuracy improvement even at coarser resolutions.
Chayan Banerjee, Kien Nguyen, Clinton Fookes, Gregory Hancock, and Thomas Coulthard
Geosci. Model Dev., 18, 803–818, https://doi.org/10.5194/gmd-18-803-2025, https://doi.org/10.5194/gmd-18-803-2025, 2025
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In geosciences, the reliance on numerical models necessitates the precise calibration of their parameters to effectively translate information from observed to unobserved settings. We introduce a generalizable framework for calibrating numerical models, with a case study of the geomorphological model CAESAR-Lisflood. This approach efficiently identifies the optimal set of parameters for a given numerical model, enabling retrospective and prospective analyses at various temporal resolutions.
Yuta Kawai and Hirofumi Tomita
Geosci. Model Dev., 18, 725–762, https://doi.org/10.5194/gmd-18-725-2025, https://doi.org/10.5194/gmd-18-725-2025, 2025
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When considering future high-resolution atmospheric simulations with O(10–100 m) grid spacing, such as global large-eddy simulations, numerical errors with the conventional low-order dynamical cores can contaminate the effects of turbulent parameterization. To achieve high-order discretization, we developed a global atmospheric dynamical core using the discontinuous Galerkin method (DGM). By conducting several validation tests, we discussed the impact of a high-order DGM on atmospheric flows.
Malena Sabaté Landman, Julianne Chung, Jiahua Jiang, Scot M. Miller, and Arvind K. Saibaba
Geosci. Model Dev., 17, 8853–8872, https://doi.org/10.5194/gmd-17-8853-2024, https://doi.org/10.5194/gmd-17-8853-2024, 2024
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Making an informed decision about what prior information to incorporate or discard in an inverse model is important yet very challenging, as it is often not straightforward to distinguish between informative and non-informative variables. In this study, we develop a new approach for incorporating prior information in an inverse model using predictor variables, while simultaneously selecting the relevant predictor variables for the estimation of the unknown quantity of interest.
Joonlee Lee, Myong-In Lee, Sunlae Tak, Eunkyo Seo, and Yong-Keun Lee
Geosci. Model Dev., 17, 8799–8816, https://doi.org/10.5194/gmd-17-8799-2024, https://doi.org/10.5194/gmd-17-8799-2024, 2024
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We developed an advanced snow water equivalent (SWE) data assimilation framework using satellite data based on a land surface model. The results of this study highlight the beneficial impact of data assimilation by effectively combining land surface model and satellite-derived data according to their relative uncertainty, thereby controlling not only transitional regions but also the regions with heavy snow accumulation that are difficult to detect by satellite.
Frédéric Parrenin, Marie Bouchet, Christo Buizert, Emilie Capron, Ellen Corrick, Russell Drysdale, Kenji Kawamura, Amaëlle Landais, Robert Mulvaney, Ikumi Oyabu, and Sune Olander Rasmussen
Geosci. Model Dev., 17, 8735–8750, https://doi.org/10.5194/gmd-17-8735-2024, https://doi.org/10.5194/gmd-17-8735-2024, 2024
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The Paleochrono-1.1 probabilistic dating model allows users to derive a common and optimized chronology for several paleoclimatic sites from various archives (ice cores, speleothems, marine cores, lake cores, etc.). It combines prior sedimentation scenarios with chronological information such as dated horizons, dated intervals, stratigraphic links and (for ice cores) Δdepth observations. Paleochrono-1.1 is available under an open-source license.
Joshua Hope-Collins, Abdalaziz Hamdan, Werner Bauer, Lawrence Mitchell, and Colin Cotter
EGUsphere, https://doi.org/https://doi.org/10.48550/arXiv.2409.18792, https://doi.org/https://doi.org/10.48550/arXiv.2409.18792, 2024
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Effectively using modern supercomputers requires massively parallel algorithms. Time-parallel algorithms calculate the system state (e.g. the atmosphere) at multiple times simultaneously and have exciting potential, but are tricky to implement and still require development. We have developed software to simplify implementing and testing the ParaDiag algorithm on supercomputers. We show that for some atmospheric problems it can enable faster or more accurate solutions than traditional techniques.
Jeffrey H. Curtis, Nicole Riemer, and Matthew West
Geosci. Model Dev., 17, 8399–8420, https://doi.org/10.5194/gmd-17-8399-2024, https://doi.org/10.5194/gmd-17-8399-2024, 2024
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This paper introduces a numerical method for simulating particle-based aerosol transport in atmospheric models. We detail the various numerical properties of the advection order method and demonstrate its implementation in a 3D weather prediction model (WRF) for the first time. Particle-based techniques improve the accuracy of aerosol size and composition predictions, which are key for aerosol–cloud and aerosol–radiation interactions.
John Thuburn
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-153, https://doi.org/10.5194/gmd-2024-153, 2024
Revised manuscript accepted for GMD
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A new computational fluid dynamics code for simulating the atmospheric boundary layer and convection is presented. Moist thermodynamics is formulated via thermodynamic potentials, avoiding inconsistencies that can be introduced with conventional approaches. Numerical methods typical of weather and climate models are used, with no explicit subgrid scheme. Results highlight some advantages (e.g., large time steps) and disadvantages (e.g., weak vertical fluxes near the surface) of this approach.
Matt J. Fischer
Geosci. Model Dev., 17, 6745–6760, https://doi.org/10.5194/gmd-17-6745-2024, https://doi.org/10.5194/gmd-17-6745-2024, 2024
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In paleoclimate research, proxy system models (PSMs) model chemical or biological systems which receive environmental input and output (e.g., geochemical signals). The environmental inputs are rarely noiseless, which causes problems when calibrating multi-input PSMs. Here a PSM is developed which includes generalized noise in both model inputs and outputs and prior information. A quasi-Bayesian method enhances the stability of the solution of the Measurement Error Proxy System Model.
Gong Cheng, Mathieu Morlighem, and G. Hilmar Gudmundsson
Geosci. Model Dev., 17, 6227–6247, https://doi.org/10.5194/gmd-17-6227-2024, https://doi.org/10.5194/gmd-17-6227-2024, 2024
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We conducted a comprehensive analysis of the stabilization and reinitialization techniques currently employed in ISSM and Úa for solving level-set equations, specifically those related to the dynamic representation of moving ice fronts within numerical ice sheet models. Our results demonstrate that the streamline upwind Petrov–Galerkin (SUPG) method outperforms the other approaches. We found that excessively frequent reinitialization can lead to exceptionally high errors in simulations.
Hugo Dominguez, Nicolas Riel, and Pierre Lanari
Geosci. Model Dev., 17, 6105–6122, https://doi.org/10.5194/gmd-17-6105-2024, https://doi.org/10.5194/gmd-17-6105-2024, 2024
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Predicting the behaviour of magmatic systems is important for understanding Earth's matter and heat transport. Numerical modelling is a technique that can predict complex systems at different scales of space and time by solving equations using various techniques. This study tests four algorithms to find the best way to transport the melt composition. The "weighted essentially non-oscillatory" algorithm emerges as the best choice, minimising errors and preserving system mass well.
Reuben W. Nixon-Hill, Daniel Shapero, Colin J. Cotter, and David A. Ham
Geosci. Model Dev., 17, 5369–5386, https://doi.org/10.5194/gmd-17-5369-2024, https://doi.org/10.5194/gmd-17-5369-2024, 2024
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Scientists often use models to study complex processes, like the movement of ice sheets, and compare them to measurements for estimating quantities that are hard to measure. We highlight an approach that ensures accurate results from point data sources (e.g. height measurements) by evaluating the numerical solution at true point locations. This method improves accuracy, aids communication between scientists, and is well-suited for integration with specialised software that automates processes.
Swen Metzger, Samuel Rémy, Jason E. Williams, Vincent Huijnen, and Johannes Flemming
Geosci. Model Dev., 17, 5009–5021, https://doi.org/10.5194/gmd-17-5009-2024, https://doi.org/10.5194/gmd-17-5009-2024, 2024
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EQSAM4Clim has recently been revised to provide an accurate and efficient method for calculating the acidity of atmospheric particles. It is based on an analytical concept that is sufficiently fast and free of numerical noise, which makes it attractive for air quality forecasting. Version 12 allows the calculation of aerosol composition based on the gas–liquid–solid and the reduced gas–liquid partitioning with the associated water uptake for both cases, including the acidity of the aerosols.
Niko Schmidt, Angelika Humbert, and Thomas Slawig
Geosci. Model Dev., 17, 4943–4959, https://doi.org/10.5194/gmd-17-4943-2024, https://doi.org/10.5194/gmd-17-4943-2024, 2024
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Future sea-level rise is of big significance for coastal regions. The melting and acceleration of glaciers plays a major role in sea-level change. Computer simulation of glaciers costs a lot of computational resources. In this publication, we test a new way of simulating glaciers. This approach produces the same results but has the advantage that it needs much less computation time. As simulations can be obtained with fewer computation resources, higher resolution and physics become affordable.
Jevgenijs Steinbuks, Yongyang Cai, Jonas Jaegermeyr, and Thomas W. Hertel
Geosci. Model Dev., 17, 4791–4819, https://doi.org/10.5194/gmd-17-4791-2024, https://doi.org/10.5194/gmd-17-4791-2024, 2024
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This paper applies a cutting-edge numerical method, SCEQ, to show how uncertain climate change and technological progress affect the future utilization of the world's scarce land resources. The paper's key insight is to illustrate how much global cropland will expand when future crop yields are unknown. The study finds the range of outcomes for land use change to be smaller when using this novel method compared to existing deterministic models.
Gianandrea Mannarini, Mario Leonardo Salinas, Lorenzo Carelli, Nicola Petacco, and Josip Orović
Geosci. Model Dev., 17, 4355–4382, https://doi.org/10.5194/gmd-17-4355-2024, https://doi.org/10.5194/gmd-17-4355-2024, 2024
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Ship weather routing has the potential to reduce CO2 emissions, but it currently lacks open and verifiable research. The Python-refactored VISIR-2 model considers currents, waves, and wind to optimise routes. The model was validated, and its computational performance is quasi-linear. For a ferry sailing in the Mediterranean Sea, VISIR-2 yields the largest percentage emission savings for upwind navigation. Given the vessel performance curve, the model is generalisable across various vessel types.
Soyoung Ha, Jonathan J. Guerrette, Ivette Hernández Baños, William C. Skamarock, and Michael G. Duda
Geosci. Model Dev., 17, 4199–4211, https://doi.org/10.5194/gmd-17-4199-2024, https://doi.org/10.5194/gmd-17-4199-2024, 2024
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To mitigate the imbalances in the initial conditions, this study introduces our recent implementation of the incremental analysis update (IAU) in the Model for Prediction Across Scales – Atmospheric (MPAS-A) component coupled with the Joint Effort for Data assimilation Integration (JEDI) through the cycling system. A month-long cycling run demonstrates the successful implementation of the IAU capability in the MPAS–JEDI cycling system.
Federica Castino, Feijia Yin, Volker Grewe, Hiroshi Yamashita, Sigrun Matthes, Simone Dietmüller, Sabine Baumann, Manuel Soler, Abolfazl Simorgh, Maximilian Mendiguchia Meuser, Florian Linke, and Benjamin Lührs
Geosci. Model Dev., 17, 4031–4052, https://doi.org/10.5194/gmd-17-4031-2024, https://doi.org/10.5194/gmd-17-4031-2024, 2024
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We introduce SolFinder 1.0, a decision-making tool to select trade-offs between different objective functions for optimal aircraft trajectories, including fuel use, flight time, NOx emissions, contrail distance, and climate impact. The module is included in the AirTraf 3.0 submodel and uses weather conditions simulated by the EMAC atmospheric model. This paper focuses on the ability of SolFinder to identify eco-efficient trajectories, reducing a flight's climate impact at limited cost penalties.
Ali Dashti, Jens C. Grimmer, Christophe Geuzaine, Florian Bauer, and Thomas Kohl
Geosci. Model Dev., 17, 3467–3485, https://doi.org/10.5194/gmd-17-3467-2024, https://doi.org/10.5194/gmd-17-3467-2024, 2024
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This study developed new meshing workflows to enable the automatic generation of meshes that follow geological models. The workflow allows for importing several geological models as input for Gmsh and later exporting the same number of high-quality meshes. This way, geological uncertainty is directly included in the numerical simulations. This study evaluates the impact of the geological uncertainty on thermohydraulic performance of two reservoirs for high-temperature heat storage applications.
Wangbin Shen, Zhaohui Lin, Zhengkun Qin, and Juan Li
Geosci. Model Dev., 17, 3447–3465, https://doi.org/10.5194/gmd-17-3447-2024, https://doi.org/10.5194/gmd-17-3447-2024, 2024
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In this study, a land surface image assimilation system capable of optimizing the spatial structure of the background field is constructed by introducing the curvelet analysis method and taking the similarity of image structure as a weak constraint. The findings demonstrate that the assimilation of surface soil moisture observation images effectively and reasonably enhances the spatial structure of soil moisture analysis field.
Luan Carlos de Sena Monteiro Ozelim, Michéle Dal Toé Casagrande, and André Luís Brasil Cavalcante
Geosci. Model Dev., 17, 3175–3197, https://doi.org/10.5194/gmd-17-3175-2024, https://doi.org/10.5194/gmd-17-3175-2024, 2024
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The paper addresses synthetic dataset challenges in nonlinear constitutive modeling of soils, providing two datasets: one with 2000 soil types, 40 test conditions each (160 000 triaxial tests), and a second with 2048 soil types, 42 test conditions each (172 032 triaxial tests). Each dataset is a 4000×10 matrix applicable for multivariate forecasting and geotechnical simulations. In addition, a new Python code is introduced, empowering researchers to leverage Python packages for NorSand analyses.
Daniel Giles, Matthew M. Graham, Mosè Giordano, Tuomas Koskela, Alexandros Beskos, and Serge Guillas
Geosci. Model Dev., 17, 2427–2445, https://doi.org/10.5194/gmd-17-2427-2024, https://doi.org/10.5194/gmd-17-2427-2024, 2024
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Digital twins of physical and human systems informed by real-time data are becoming ubiquitous across a wide range of settings. Progress for researchers is currently limited by a lack of tools to run these models effectively and efficiently. A key challenge is the optimal use of high-performance computing environments. The work presented here focuses on a developed open-source software platform which aims to improve this usage, with an emphasis placed on flexibility, efficiency, and scalability.
Stefan J. Miller, Paul A. Makar, and Colin J. Lee
Geosci. Model Dev., 17, 2197–2219, https://doi.org/10.5194/gmd-17-2197-2024, https://doi.org/10.5194/gmd-17-2197-2024, 2024
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This work outlines a new solver written in Fortran to calculate the partitioning of metastable aerosols at thermodynamic equilibrium based on the forward algorithms of ISORROPIA II. The new code includes numerical improvements that decrease the computational speed (compared to ISORROPIA II) while improving the accuracy of the partitioning solution.
Fernanda Alvarado-Neves, Laurent Ailleres, Lachlan Grose, Alexander R. Cruden, and Robin Armit
Geosci. Model Dev., 17, 1975–1993, https://doi.org/10.5194/gmd-17-1975-2024, https://doi.org/10.5194/gmd-17-1975-2024, 2024
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Previous work has demonstrated that adding geological knowledge to modelling methods creates more accurate and reliable models. Following this reasoning, we added constraints from magma emplacement mechanisms into existing modelling frameworks to improve the 3D characterisation of igneous intrusions. We tested the method on synthetic and real-world case studies, and the results show that our method can reproduce intrusion morphologies with no manual processing and using realistic datasets.
André R. Brodtkorb, Anna Benedictow, Heiko Klein, Arve Kylling, Agnes Nyiri, Alvaro Valdebenito, Espen Sollum, and Nina Kristiansen
Geosci. Model Dev., 17, 1957–1974, https://doi.org/10.5194/gmd-17-1957-2024, https://doi.org/10.5194/gmd-17-1957-2024, 2024
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It is vital to know the extent and concentration of volcanic ash in the atmosphere during a volcanic eruption. Whilst satellite imagery may give an estimate of the ash right now (assuming no cloud coverage), we also need to know where it will be in the coming hours. This paper presents a method for estimating parameters for a volcanic eruption based on satellite observations of ash in the atmosphere. The software package is open source and applicable to similar inversion scenarios.
Kees Nederhoff, Maarten van Ormondt, Jay Veeramony, Ap van Dongeren, José Antonio Álvarez Antolínez, Tim Leijnse, and Dano Roelvink
Geosci. Model Dev., 17, 1789–1811, https://doi.org/10.5194/gmd-17-1789-2024, https://doi.org/10.5194/gmd-17-1789-2024, 2024
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Forecasting tropical cyclones and their flooding impact is challenging. Our research introduces the Tropical Cyclone Forecasting Framework (TC-FF), enhancing cyclone predictions despite uncertainties. TC-FF generates global wind and flood scenarios, valuable even in data-limited regions. Applied to cases like Cyclone Idai, it showcases potential in bettering disaster preparation, marking progress in handling cyclone threats.
Younghun Kang and Ethan J. Kubatko
Geosci. Model Dev., 17, 1603–1625, https://doi.org/10.5194/gmd-17-1603-2024, https://doi.org/10.5194/gmd-17-1603-2024, 2024
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Models used to simulate the flow of coastal and riverine waters, including flooding, require a geometric representation (or mesh) of geographic features that exhibit a range of disparate spatial scales from large, open waters to small, narrow channels. Representing these features in an accurate way without excessive computational overhead presents a challenge. Here, we develop an automatic mesh generation tool to help address this challenge. Our results demonstrate the efficacy of our approach.
Hui Wan, Kai Zhang, Christopher J. Vogl, Carol S. Woodward, Richard C. Easter, Philip J. Rasch, Yan Feng, and Hailong Wang
Geosci. Model Dev., 17, 1387–1407, https://doi.org/10.5194/gmd-17-1387-2024, https://doi.org/10.5194/gmd-17-1387-2024, 2024
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Sophisticated numerical models of the Earth's atmosphere include representations of many physical and chemical processes. In numerical simulations, these processes need to be calculated in a certain sequence. This study reveals the weaknesses of the sequence of calculations used for aerosol processes in a global atmosphere model. A revision of the sequence is proposed and its impacts on the simulated global aerosol climatology are evaluated.
Christopher J. Vogl, Hui Wan, Carol S. Woodward, and Quan M. Bui
Geosci. Model Dev., 17, 1409–1428, https://doi.org/10.5194/gmd-17-1409-2024, https://doi.org/10.5194/gmd-17-1409-2024, 2024
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Generally speaking, accurate climate simulation requires an accurate evolution of the underlying mathematical equations on large computers. The equations are typically formulated and evolved in process groups. Process coupling refers to how the evolution of each group is combined with that of other groups to evolve the full set of equations for the whole atmosphere. This work presents a mathematical framework to evaluate methods without the need to first implement the methods.
Tom Keel, Chris Brierley, and Tamsin Edwards
Geosci. Model Dev., 17, 1229–1247, https://doi.org/10.5194/gmd-17-1229-2024, https://doi.org/10.5194/gmd-17-1229-2024, 2024
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Jet streams are an important control on surface weather as their speed and shape can modify the properties of weather systems. Establishing trends in the operation of jet streams may provide some indication of the future of weather in a warming world. Despite this, it has not been easy to establish trends, as many methods have been used to characterise them in data. We introduce a tool containing various implementations of jet stream statistics and algorithms that works in a standardised manner.
Amir Golparvar, Matthias Kästner, and Martin Thullner
Geosci. Model Dev., 17, 881–898, https://doi.org/10.5194/gmd-17-881-2024, https://doi.org/10.5194/gmd-17-881-2024, 2024
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Coupled reaction transport modelling is an established and beneficial method for studying natural and synthetic porous material, with applications ranging from industrial processes to natural decompositions in terrestrial environments. Up to now, a framework that explicitly considers the porous structure (e.g. from µ-CT images) for modelling the transport of reactive species is missing. We presented a model that overcomes this limitation and represents a novel numerical simulation toolbox.
Stefan Hergarten
Geosci. Model Dev., 17, 781–794, https://doi.org/10.5194/gmd-17-781-2024, https://doi.org/10.5194/gmd-17-781-2024, 2024
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The Voellmy rheology has been widely used for simulating snow and rock avalanches. Recently, a modified version of this rheology was proposed, which turned out to be able to predict the observed long runout of large rock avalanches theoretically. The software MinVoellmy presented here is the first numerical implementation of the modified rheology. It consists of MATLAB and Python classes, where simplicity and parsimony were the design goals.
Arjun Babu Nellikkattil, Danielle Lemmon, Travis Allen O'Brien, June-Yi Lee, and Jung-Eun Chu
Geosci. Model Dev., 17, 301–320, https://doi.org/10.5194/gmd-17-301-2024, https://doi.org/10.5194/gmd-17-301-2024, 2024
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This study introduces a new computational framework called Scalable Feature Extraction and Tracking (SCAFET), designed to extract and track features in climate data. SCAFET stands out by using innovative shape-based metrics to identify features without relying on preconceived assumptions about the climate model or mean state. This approach allows more accurate comparisons between different models and scenarios.
Mohammad Mortezazadeh, Jean-François Cossette, Ashu Dastoor, Jean de Grandpré, Irena Ivanova, and Abdessamad Qaddouri
Geosci. Model Dev., 17, 335–346, https://doi.org/10.5194/gmd-17-335-2024, https://doi.org/10.5194/gmd-17-335-2024, 2024
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The interpolation process is the most computationally expensive step of the semi-Lagrangian (SL) approach. In this paper we implement a new interpolation scheme into the semi-Lagrangian approach which has the same computational cost as a third-order polynomial scheme but with the accuracy of a fourth-order interpolation scheme. This improvement is achieved by using two third-order backward and forward polynomial interpolation schemes in two consecutive time steps.
Boris Gailleton, Luca C. Malatesta, Guillaume Cordonnier, and Jean Braun
Geosci. Model Dev., 17, 71–90, https://doi.org/10.5194/gmd-17-71-2024, https://doi.org/10.5194/gmd-17-71-2024, 2024
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This contribution presents a new method to numerically explore the evolution of mountain ranges and surrounding areas. The method helps in monitoring with details on the timing and travel path of material eroded from the mountain ranges. It is particularly well suited to studies juxtaposing different domains – lakes or multiple rock types, for example – and enables the combination of different processes.
Denise Degen, Daniel Caviedes Voullième, Susanne Buiter, Harrie-Jan Hendricks Franssen, Harry Vereecken, Ana González-Nicolás, and Florian Wellmann
Geosci. Model Dev., 16, 7375–7409, https://doi.org/10.5194/gmd-16-7375-2023, https://doi.org/10.5194/gmd-16-7375-2023, 2023
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In geosciences, we often use simulations based on physical laws. These simulations can be computationally expensive, which is a problem if simulations must be performed many times (e.g., to add error bounds). We show how a novel machine learning method helps to reduce simulation time. In comparison to other approaches, which typically only look at the output of a simulation, the method considers physical laws in the simulation itself. The method provides reliable results faster than standard.
Carlos Spa, Otilio Rojas, and Josep de la Puente
Geosci. Model Dev., 16, 7237–7252, https://doi.org/10.5194/gmd-16-7237-2023, https://doi.org/10.5194/gmd-16-7237-2023, 2023
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This paper develops a calibration methodology of all absorbing techniques typically used by Fourier pseudo-spectral time-domain (PSTD) methods for geoacoustic wave simulations. The main contributions of the paper are (a) an implementation and quantitative comparison of all absorbing techniques available for PSTD methods through a simple and robust numerical experiment, and (b) a validation of these absorbing techniques in several 3-D seismic scenarios with gradual heterogeneity complexities.
Michael Hillier, Florian Wellmann, Eric A. de Kemp, Boyan Brodaric, Ernst Schetselaar, and Karine Bédard
Geosci. Model Dev., 16, 6987–7012, https://doi.org/10.5194/gmd-16-6987-2023, https://doi.org/10.5194/gmd-16-6987-2023, 2023
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Neural networks can be used effectively to model three-dimensional geological structures from point data, sampling geological interfaces, units, and structural orientations. Existing neural network approaches for this type of modelling are advanced by the efficient incorporation of unconformities, new knowledge inputs, and improved data fitting techniques. These advances permit the modelling of more complex geology in diverse geological settings, different-sized areas, and various data regimes.
Ane Lopez de Gamiz-Zearra, Cecilie Hansen, Xavier Corrales, Iñaki Quincoces, Izaskun Preciado, and Eider Andonegi
EGUsphere, https://doi.org/10.5194/egusphere-2023-1368, https://doi.org/10.5194/egusphere-2023-1368, 2023
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This paper describes the development of the first calibrated end-to-end Atlantis model for the Bay of Biscay that will help us improve the comprehension of the spatial functioning of the Bay of Biscay ecosystem and help establishing management measures of human activities. Our results highlighted the importance of lower trophic levels to the pelagic system and demonstrate the importance of having accurate and precise data for biological processes.
Tor Nordam, Ruben Kristiansen, Raymond Nepstad, Erik van Sebille, and Andy M. Booth
Geosci. Model Dev., 16, 5339–5363, https://doi.org/10.5194/gmd-16-5339-2023, https://doi.org/10.5194/gmd-16-5339-2023, 2023
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We describe and compare two common methods, Eulerian and Lagrangian models, used to simulate the vertical transport of material in the ocean. They both solve the same transport problems but use different approaches for representing the underlying equations on the computer. The main focus of our study is on the numerical accuracy of the two approaches. Our results should be useful for other researchers creating or using these types of transport models.
Mathieu Gravey and Grégoire Mariethoz
Geosci. Model Dev., 16, 5265–5279, https://doi.org/10.5194/gmd-16-5265-2023, https://doi.org/10.5194/gmd-16-5265-2023, 2023
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Multiple‐point geostatistics are widely used to simulate complex spatial structures based on a training image. The use of these methods relies on the possibility of finding optimal training images and parametrization of the simulation algorithms. Here, we propose finding an optimal set of parameters using only the training image as input. The main advantage of our approach is to remove the risk of overfitting an objective function.
Siting Li, Ping Wang, Hong Wang, Yue Peng, Zhaodong Liu, Wenjie Zhang, Hongli Liu, Yaqiang Wang, Huizheng Che, and Xiaoye Zhang
Geosci. Model Dev., 16, 4171–4191, https://doi.org/10.5194/gmd-16-4171-2023, https://doi.org/10.5194/gmd-16-4171-2023, 2023
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Optimizing the initial state of atmospheric chemistry model input is one of the most essential methods to improve forecast accuracy. Considering the large computational load of the model, we introduce an ensemble optimal interpolation scheme (EnOI) for operational use and efficient updating of the initial fields of chemical components. The results suggest that EnOI provides a practical and cost-effective technique for improving the accuracy of chemical weather numerical forecasts.
Thomas Richter, Véronique Dansereau, Christian Lessig, and Piotr Minakowski
Geosci. Model Dev., 16, 3907–3926, https://doi.org/10.5194/gmd-16-3907-2023, https://doi.org/10.5194/gmd-16-3907-2023, 2023
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Sea ice covers not only the pole regions but affects the weather and climate globally. For example, its white surface reflects more sunlight than land. The oceans around the poles are therefore kept cool, which affects the circulation in the oceans worldwide. Simulating the behavior and changes in sea ice on a computer is, however, very difficult. We propose a new computer simulation that better models how cracks in the ice change over time and show this by comparing to other simulations.
Emma J. MacKie, Michael Field, Lijing Wang, Zhen Yin, Nathan Schoedl, Matthew Hibbs, and Allan Zhang
Geosci. Model Dev., 16, 3765–3783, https://doi.org/10.5194/gmd-16-3765-2023, https://doi.org/10.5194/gmd-16-3765-2023, 2023
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Earth scientists often have to fill in spatial gaps in measurements. This gap-filling or interpolation can be accomplished with geostatistical methods, where the statistical relationships between measurements are used to inform how these gaps should be filled. Despite the broad utility of these methods, there are few freely available geostatistical software applications. We present GStatSim, a Python package for performing different geostatistical interpolation methods.
Ian Madden, Simone Marras, and Jenny Suckale
Geosci. Model Dev., 16, 3479–3500, https://doi.org/10.5194/gmd-16-3479-2023, https://doi.org/10.5194/gmd-16-3479-2023, 2023
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To aid risk managers who may wish to rapidly assess tsunami risk but may lack high-performance computing infrastructure, we provide an accessible software package able to rapidly model tsunami inundation over real topography by leveraging Google's Tensor Processing Unit, a high-performance hardware. Minimally trained users can take advantage of the rapid modeling abilities provided by this package via a web browser thanks to the ease of use of Google Cloud Platform.
Cited articles
Andrysco, M., Jhala, R., and Lerner, S.: Printing floating-point numbers: a
faster, always correct method, Proceedings of the 43rd Annual ACM SIGPLAN-SIGACT Symposium on Principles of Programming Languages, 51, 555–567,
https://doi.org/10.1145/2837614.2837654, 2016.
Arteaga, A., Fuhrer, O., and Hoefler, T.: Designing Bit-Reproducible
Portable High-Performance Applications, 2014 IEEE International Parallel
& Distributed Processing Symposium (IPDPS), USA, 1235–1244,
https://doi.org/10.1109/IPDPS.2014.127, 2014.
Bailey, D. H.: Resolving numerical anomalies in scientific computation,
Lawrence Berkeley National Laboratory, University of California, USA, https://escholarship.org/uc/item/2qf8v4bn (last access: 30 August 2022), 2008.
Baker, A. H., Hammerling, D. M., Levy, M. N., Xu, H., Dennis, J. M., Eaton, B. E., Edwards, J., Hannay, C., Mickelson, S. A., Neale, R. B., Nychka, D., Shollenberger, J., Tribbia, J., Vertenstein, M., and Williamson, D.: A new ensemble-based consistency test for the Community Earth System Model (pyCECT v1.0), Geosci. Model Dev., 8, 2829–2840, https://doi.org/10.5194/gmd-8-2829-2015, 2015.
Donahue, A. S. and Caldwell, P. M.: Impact of Physics Parameterization
Ordering in A Global Atmosphere Model, J. Adv. Model. Earth Sy., 10, 481–499,
https://doi.org/10.1002/2017MS001067, 2018.
Düben, P. D., Joven, J., Lingamneni, A., McNamara, H., Micheli, G. D.,
Palem, K. V., and Palmer, T. N.: On the use of inexact, pruned hardware in
atmospheric modelling, Phil. Trans. R. Soc. A, 372, 20130276, https://doi.org/10.1098/rsta.2013.0276, 2014.
Düben, P. D., Subramanian, A., Dawson, A., and Palmer T. N.: A study of
reduced numerical precision to make superparametrisation more competitive using a hardware emulator in the
OpenIFS model, J. Adv. Model. Earth Sy., 9, 566–584,
https://doi.org/10.1002/2016MS000862, 2017.
Emanuel, K. A. and Živković-Rothman, M.: Development and evaluation
of a convection scheme for use in climate models, J. Atmos. Sci., 56,
1766–1782, https://doi.org/10.1175/1520-0469(1999)056<1766:DAEOAC>2.0.CO;2, 1999.
Flato, G. M.: Earth system models: an overview, WIREs Clim. Change, 2,
783–800, https://doi.org/10.1002/wcc.148, 2011.
Fu, H., Liao, J., Yang, J., Wang, L., Song, Z., Huang, X., Yang, C., Xue,
W., Liu, F., Qiao, F., Zhao, W., Yin, X., Hou, C., Zhang, C., Ge, W., Zhang,
J., Wang, Y., Zhou, C., and Yang, G.: The sunway TaihuLight supercomputer:
system and applications, Sci. China Inf. Sci., 59, 072001,
https://doi.org/10.1007/s11432-016-5588-7, 2016.
Fu, H., Liao, J., Ding, N., Duan, X., Gan, L., Liang, Y., Wang, X., Yang,
J., Zheng, Y., Liu, W., Wang, L., and Yang, G.: Redesigning cam-se for
peta-scale climate modeling performance and ultra-high resolution on sunway
taihulight, In Proceedings of the international conference for high
performance computing, networking, storage and analysis, Association for Computing Machinery, https://doi.org/10.1145/3126908.3126909, 2017a.
Fu, H., Liao, J., Xue, W., Wang, L., Chen, D., Gu, L., Xu, J., Ding, N.,
Wang, X., He, C., Xu, S., Liang, Y., Fang, J., Xu, Y., Zheng, W., Xu, J.,
Zheng, Z., Wei, W., Ji, X., Zhang, H., Chen, B., Li, K., Huang, X., Chen,
W., and Yang, G.: Refactoring and optimizing the community atmosphere model
(CAM) on the sunway taihu-light supercomputer, in: High performance
computing, networking, storage and analysis, International Conference for High Performance Computing, Networking, Storage and Analysis, https://doi.org/10.1109/SC.2016.82, 2017b.
Fuhrer, O., Chadha, T., Hoefler, T., Kwasniewski, G., Lapillonne, X., Leutwyler, D., Lüthi, D., Osuna, C., Schär, C., Schulthess, T. C., and Vogt, H.: Near-global climate simulation at 1 km resolution: establishing a performance baseline on 4888 GPUs with COSMO 5.0, Geosci. Model Dev., 11, 1665–1681, https://doi.org/10.5194/gmd-11-1665-2018, 2018.
Goff, J. and Gratch, S: List 1947, Smithsonian Meteorological Tables, Trans.
Am. Soc., 52, 95, 1946.
Kara, A. B., Rochford P. A., and Hurlburt H. E.: An optimal definition for
ocean mixed layer depth, J. Geophys. Res.-Oceans, 105, 16803–16821,
https://doi.org/10.1029/2000JC900072, 2000.
Kelly, R. C.: GPU Computing for Atmospheric Modeling, Comput. Sci. Eng., 12,
26–33, https://doi.org/10.1109/MCSE.2010.26, 2010.
Li, S., Zhang, S., Liu, Z., Yang, X. Rosati, A., Golaz, J. C., and Zhao, M.:
The Role of Large-scale Feedbacks in Cumulus Convection Parameter
Estimation, J. Climate, 29, 4099–4119, https://doi.org/10.1175/JCLI-D-15-0117.1,
2016.
Liao, X., Xiao, L., Yang, C., and Lu, Y.: Milkyway-2 supercomputer: system
and application, Front. Comput. Sci., 8, 345–356,
https://doi.org/10.1007/s11704-014-3501-3, 2014.
Linford, J. C., Michalakes, J., Vachharajani, M., and Sandu, A.: Multi-core
acceleration of chemical kinetics for simulation and prediction, in: High
performance computing networking, storage and analysis, International Conference for High Performance Computing Networking, Storage and Analysis, 1–11, https://doi.org/10.1145/1654059.1654067, 2009.
Mielikainen, J., Huang, B., Wang, J., Huang, H.-L. A., and Goldberg, M. D.:
Compute unified device architecture (CUDA)-based parallelization of WRF
Kessler cloud microphysics scheme, Comput. Geosci.-UK, 52, 292–299,
https://doi.org/10.1016/j.cageo.2012.10.006, 2013.
Milroy, D. J., Baker, A. H., Hammerling, D. M., Dennis, J. M., Mickelson, S.
A., and Jessup, E. R.: Towards Characterizing the Variability of
Statistically Consistent Community Earth System Model Simulations, Pro.
Comput. Sci., 80, 1589–1600, https://doi.org/10.1016/j.procs.2016.05.489,
2016.
Morrison, H. and Gettelman, A.: A new two-moment bulk stratiform cloud
microphysics scheme in the Community Atmosphere Model, version 3 (CAM3).
Part I: Description and numerical tests, J. Climate, 21, 3642–3659,
https://doi.org/10.1175/2008JCLI2105.1, 2008.
Neale, R. B., Richter, J. H., and Jochum, M.: The impact of convection on
ENSO: From a delayed oscillator to a series of events, J. Climate, 21,
5904–5924, https://doi.org/10.1175/2008JCLI2244.1, 2008.
Palem, K. and Lingamneni, A.: Ten Years of Building Broken Chips: The
Physics and Engineering of Inexact Computing, ACM T. Embed.
Comput. S., 12, 1–23, https://doi.org/10.1145/2465787.2465789,
2013.
Park, S., Bretherton, C. S., and Rasch, P. J.: Integrating Cloud Processes
in the Community Atmosphere Model, Version 5, J. Climate, 27, 6821–6856,
https://doi.org/10.1175/JCLI-D-14-00087.1, 2014.
Rosinski, J. M. and Williamson, D. L.: The accumulation of rounding errors
and port validation for global atmospheric models, SIAM J. Sci. Comput., 18,
552–564, https://doi.org/10.1137/S1064827594275534, 1997.
Sansom, P. G., Stephenson, D. B., Ferro, C. A. T., Zappa, G., and Shaffery,
L.: Simple uncertainty frameworks for selecting weighting schemes and
interpreting multimodel ensemble climate change experiments, J. Climate, 26,
4017–4037, https://doi.org/10.1175/JCLI-D-12-00462.1, 2013.
Stephenson, M., Hari, S. K. S., Lee, Y., Ebrahimi, E., Johnson, D. R.,
Nellans, D., O'Connor, M., and Keckler, S. W.: Flexible Software Profiling
of GPU Architectures, ACM SIGARCH Comp. Architecture News, 43, 185–197, 2015.
Sun, W. Y. and Ogura, Y.: Modeling the Evolution of the Convective Planetary
Boundary Layer, J. Atmos. Sci., 37, 1558–1572,
https://doi.org/10.1175/1520-0469(1980)037<1558:MTEOTC>2.0.CO;2, 1980.
Tintó Prims, O., Acosta, M. C., Moore, A. M., Castrillo, M., Serradell, K., Cortés, A., and Doblas-Reyes, F. J.: How to use mixed precision in ocean models: exploring a potential reduction of numerical precision in NEMO 4.0 and ROMS 3.6, Geosci. Model Dev., 12, 3135–3148, https://doi.org/10.5194/gmd-12-3135-2019, 2019.
Vazhkudai, S. S., de Supinski, B. R., Bland, A. S., Geist, A., Sexton, J.,
Kahle, J., Zimmer, C. J., Atchley, S., Oral, S., Maxwell, D. E., Vergara
Larrea, V. G., Bertsch, A., Goldstone, R., Joubert, W., Chambreau, C.,
Appelhans, D., Blackmore, R., Casses, B., Chochia, G., Davison, G., Ezell,
M. A., Gooding, T., Gonsiorowski, E., Grinberg, L., Hanson, B., Hartner, B.,
Karlin, I., Leininger, M. L., Leverman, D., Marroquin, C., Moody, A.,
Ohmacht, M., Pankajakshan, R., Pizzano, F., Rogers, J. H., Rosenburg, B.,
Schmidt, D., Shankar, M., Wang, F., Watson, P., Walkup, B., Weems, L. D.,
and Yin, J.: The design, deployment, and evaluation of the coral
pre-exascale systems, in: International Conference for High Performance Computing, Networking, Storage and Analysis, USA, https://doi.org/10.1109/SC.2018.00055, 2018.
Wang, M. and Zhang, G. J.: Improving the Simulation of Tropical Convective
Cloud-Top Heights in CAM5 with CloudSat Observations, J. Climate, 31, 5189–5204,
https://doi.org/10.1175/JCLI-D-18-0027.1, 2018.
Whitehead, N. and Fit-Florea, A.: Precision & Performance: Floating
Point and IEEE 754 Compliance for NVIDIA GPUs,
https://developer.nvidia.com/sites/default/files/akamai/cuda/files/NVIDIA-CUDA-Floating-Point.pdf (last access: 27 August 2022),
2011.
Xiao, H., Sun, J., Bian, X., and Dai, Z.: GPU acceleration of the WSM6 cloud
microphysics scheme in GRAPES model, Comput. Geosci., 59, 156–162,
https://doi.org/10.1016/j.cageo.2013.06.016, 2013.
Xu, S., Huang, X., Oey, L.-Y., Xu, F., Fu, H., Zhang, Y., and Yang, G.: POM.gpu-v1.0: a GPU-based Princeton Ocean Model, Geosci. Model Dev., 8, 2815–2827, https://doi.org/10.5194/gmd-8-2815-2015, 2015.
Yano, J. I.: Subgrid-scale physical parameterization in atmospheric
modeling: How can we make it consistent?, J. Phys. A-Math. Theor., 49, 284001,
https://doi.org/10.1088/1751-8113/49/28/284001, 2016.
Yu, Y., Zhang, S., Fu, H., Wu, L., Chen, D., Gao, Y., Wei, Z., Jia, D., and Lin, X.: Data and Codes of Characterizing Uncertainties of Earth System Modeling with Heterogeneous Many-core Architecture Computing, Zenodo [data set], https://doi.org/10.5281/zenodo.6481868, 2022.
Zhang, G. J. and McFarlane, N. A.: Sensitivity of climate simulations to
the parameterization of cumulus convection in the Canadian climate centre
general circulation model, Atmos. Ocean, 33, 407–446,
https://doi.org/10.1080/07055900.1995.9649539, 1995.
Zhang, S., Fu, H., Wu, L., Li, Y., Wang, H., Zeng, Y., Duan, X., Wan, W., Wang, L., Zhuang, Y., Meng, H., Xu, K., Xu, P., Gan, L., Liu, Z., Wu, S., Chen, Y., Yu, H., Shi, S., Wang, L., Xu, S., Xue, W., Liu, W., Guo, Q., Zhang, J., Zhu, G., Tu, Y., Edwards, J., Baker, A., Yong, J., Yuan, M., Yu, Y., Zhang, Q., Liu, Z., Li, M., Jia, D., Yang, G., Wei, Z., Pan, J., Chang, P., Danabasoglu, G., Yeager, S., Rosenbloom, N., and Guo, Y.: Optimizing high-resolution Community Earth System Model on a heterogeneous many-core supercomputing platform, Geosci. Model Dev., 13, 4809–4829, https://doi.org/10.5194/gmd-13-4809-2020, 2020.
Short summary
To understand the scientific consequence of perturbations caused by slave cores in heterogeneous computing environments, we examine the influence of perturbation amplitudes on the determination of the cloud bottom and cloud top and compute the probability density function (PDF) of generated clouds. A series of comparisons of the PDFs between homogeneous and heterogeneous systems show consistently acceptable error tolerances when using slave cores in heterogeneous computing environments.
To understand the scientific consequence of perturbations caused by slave cores in heterogeneous...
