Articles | Volume 14, issue 12
https://doi.org/10.5194/gmd-14-7391-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-14-7391-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Model description paper
| 
01 Dec 2021
Model description paper |
| 01 Dec 2021
| 01 Dec 2021
POET (v0.1): speedup of many-core parallel reactive transport simulations with fast DHT lookups
GFZ German Research Centre for Geosciences, Fluid Systems Modelling, Telegrafenberg, 14473 Potsdam, Germany
Michael Kühn
GFZ German Research Centre for Geosciences, Fluid Systems Modelling, Telegrafenberg, 14473 Potsdam, Germany
University of Potsdam, Institute of Geosciences, Karl-Liebknecht-Str. 24–25, 14476 Potsdam, Germany
Alexander Lindemann
University of Potsdam, Institute of Computer Science, Operating Systems and Distributed Systems, An der Bahn 2, 14476 Potsdam, Germany
Max Lübke
GFZ German Research Centre for Geosciences, Fluid Systems Modelling, Telegrafenberg, 14473 Potsdam, Germany
University of Potsdam, Institute of Computer Science, Operating Systems and Distributed Systems, An der Bahn 2, 14476 Potsdam, Germany
Bettina Schnor
University of Potsdam, Institute of Computer Science, Operating Systems and Distributed Systems, An der Bahn 2, 14476 Potsdam, Germany
Related authors
Morgan Tranter, Maria Wetzel, Marco De Lucia, and Michael Kühn
Adv. Geosci., 56, 57–65, https://doi.org/10.5194/adgeo-56-57-2021, https://doi.org/10.5194/adgeo-56-57-2021, 2021
Short summary
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Barite formation is an important factor for many use cases of the geological subsurface because it may change the rock.
In this modelling study, the replacement reaction of celestite to barite is investigated.
The steps that were identified to play a role are celestite dissolution followed by two-step precipitation of barite: spontaneous formation of small crystals and their subsequent growth.
Explicitly including the processes improve the usability of the models for quantified prediction.
Marco De Lucia and Michael Kühn
Adv. Geosci., 56, 33–43, https://doi.org/10.5194/adgeo-56-33-2021, https://doi.org/10.5194/adgeo-56-33-2021, 2021
Short summary
Short summary
RedModRphree is an R extension package to leverage the PHREEQC engine for geochemical models, providing convenience functions to efficiently setup computations and program algorithms involving geochemical models. Version 0.3.6 ships with a novel implementation of Pourbaix (potential/pH) diagram computation which considers the full speciation of the solution at each diagram point.
Marco De Lucia and Michael Kühn
Geosci. Model Dev., 14, 4713–4730, https://doi.org/10.5194/gmd-14-4713-2021, https://doi.org/10.5194/gmd-14-4713-2021, 2021
Short summary
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DecTree evaluates a hierarchical coupling method for reactive transport simulations in which pre-trained surrogate models are used to speed up the geochemical subprocess, and equation-based
full-physicssimulations are called only if the surrogate predictions are implausible. Furthermore, we devise and evaluate a decision tree surrogate approach designed to inject domain knowledge of the surrogate by defining engineered features based on law of mass action or stoichiometric reaction equations.
M. De Lucia, T. Kempka, and M. Kühn
Geosci. Model Dev., 8, 279–294, https://doi.org/10.5194/gmd-8-279-2015, https://doi.org/10.5194/gmd-8-279-2015, 2015
Michael Kühn, Viktor J. Bruckman, Sonja Martens, Johannes Miocic, and Giorgia Stasi
Adv. Geosci., 62, 67–69, https://doi.org/10.5194/adgeo-62-67-2024, https://doi.org/10.5194/adgeo-62-67-2024, 2024
Theresa Hennig and Michael Kühn
Adv. Geosci., 62, 21–30, https://doi.org/10.5194/adgeo-62-21-2023, https://doi.org/10.5194/adgeo-62-21-2023, 2023
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Uranium migration for a close to real case situation is quantified with reactive transport simulations using input data from the deep geothermal borehole Schlattingen, which is near the targeted area in Switzerland, and including the effect of the multi-barrier system on the source term. The hydrogeological system must always be considered in safety assessments since adjacent aquifers have a major impact on the pore water geochemistry, and hence sorption processes.
Theresa Hennig and Michael Kühn
Saf. Nucl. Waste Disposal, 2, 147–147, https://doi.org/10.5194/sand-2-147-2023, https://doi.org/10.5194/sand-2-147-2023, 2023
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Migration of uranium in the potential host rock Opalinus Clay is used as an example to demonstrate the extent to which simulated migration lengths can vary for a million years, depending on the model concept and on the underlying data and parameters. To reduce the uncertainty in this context, the calcite carbonate ion and the hydrogeological system at a potential disposal site need to be known, whereas the quantity of clay minerals plays a subordinate role, as long as it is enough.
Michael Kühn, Dirk Bosbach, Horst Geckeis, Vinzenz Brendler, and Olaf Kolditz
Saf. Nucl. Waste Disposal, 2, 195–195, https://doi.org/10.5194/sand-2-195-2023, https://doi.org/10.5194/sand-2-195-2023, 2023
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The Repository Site Selection Act explicitly emphasises that targeting the disposal of high-level radioactive waste is a so-called learning process. We are of the opinion that the procedure and the available data should be combined with geoscientific knowledge to support the identification of siting regions. We propose this workshop and invite all experts who have dealt with the search for a repository site from a geoscientific perspective.
Viktor J. Bruckman, Gregor Giebel, Christopher Juhlin, Sonja Martens, and Michael Kühn
Adv. Geosci., 58, 87–91, https://doi.org/10.5194/adgeo-58-87-2022, https://doi.org/10.5194/adgeo-58-87-2022, 2022
Elena Chabab, Michael Kühn, and Thomas Kempka
Adv. Geosci., 58, 47–54, https://doi.org/10.5194/adgeo-58-47-2022, https://doi.org/10.5194/adgeo-58-47-2022, 2022
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The present study, uses density-driven flow and transport models to evaluate mechanisms of saline water intrusion from deep aquifers into the freshwater column used for drinking water supply under different boundary conditions and for a specific site in the German Federal State of Brandenburg. Results show that mainly decreasing groundwater recharge leads to increased and earlier salinisation which highlights the need for waterworks to initiate effective countermeasures quickly and in time.
Michael Kühn, Melissa Präg, Ivy Becker, Christoph Hilgers, Andreas Grafe, and Thomas Kempka
Adv. Geosci., 58, 31–39, https://doi.org/10.5194/adgeo-58-31-2022, https://doi.org/10.5194/adgeo-58-31-2022, 2022
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The geothermal hot water reservoir below the small town of Waiwera in New Zealand has been known to the indigenous Maori for many centuries. Overproduction by European immigrants led to a water level decrease and consequently artesian flow from the wells and the seeps on the beach ceased. The Te Kaunihera o Tāmaki Makaurau Auckland Council established the Waiwera Thermal Groundwater Allocation and Management Plan to allow the geothermal system to recover.
Thomas Kempka, Svenja Steding, and Michael Kühn
Adv. Geosci., 58, 19–29, https://doi.org/10.5194/adgeo-58-19-2022, https://doi.org/10.5194/adgeo-58-19-2022, 2022
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The TRANSPORT Simulation Environment (TRANSPORTSE) was coupled with the geochemical reaction module PHREEQC, providing multiple new features that make it applicable to complex reactive transport problems in various geoscientific fields. Two computationally demanding and complex geochemical benchmarks were used in the present study to successfully verify the code implementation.
Theresa Hennig and Michael Kühn
Adv. Geosci., 58, 11–18, https://doi.org/10.5194/adgeo-58-11-2022, https://doi.org/10.5194/adgeo-58-11-2022, 2022
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Safety assessments must demonstrate that radionuclides in potential disposal sites are retained within the containment providing rock zone using reactive transport simulations. Here, this is quantified for the example of uranium in the hydrogeological system of the Opalinus Clay at Mont Terri. Our work clearly shows how sensitive migration lengths resulting from simulations are to the model conceptualisation and selection of underlying data.
Maria Wetzel, Thomas Kempka, and Michael Kühn
Adv. Geosci., 58, 1–10, https://doi.org/10.5194/adgeo-58-1-2022, https://doi.org/10.5194/adgeo-58-1-2022, 2022
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Porosity-permeability relations are simulated for a precipitation-dissolution cycle in a virtual sandstone. A hysteresis in permeability is observed depending on the geochemical process and dominating reaction regime, whereby permeability varies by more than two orders of magnitude. Controlling parameters for this hysteresis phenomenon are the closure and re-opening of micro-scale flow channels, derived from changes in pore throat diameter and connectivity of the pore network.
Michael Kühn and Leonard Grabow
Adv. Geosci., 56, 107–116, https://doi.org/10.5194/adgeo-56-107-2021, https://doi.org/10.5194/adgeo-56-107-2021, 2021
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The geothermal reservoir at Waiwera has been subject to active exploitation for a long time. However, the continuous production of geothermal water, to supply hotels and spas, had a negative impact on the reservoir. The aim of this work was to link the influence of the abstraction rates to the measured water level data to derive reservoir properties. For the analysis, a modified deconvolution algorithm was implemented and shown to be applicable and in accordance to results of a pumping test.
Dirk Bosbach, Horst Geckeis, Frank Heberling, Olaf Kolditz, Michael Kühn, Katharina Müller, Thorsten Stumpf, and the iCROSS team
Saf. Nucl. Waste Disposal, 1, 85–87, https://doi.org/10.5194/sand-1-85-2021, https://doi.org/10.5194/sand-1-85-2021, 2021
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The present contribution provides an overview on the collaborative project iCROSS and reports selected results. The impact of considering complex coupled processes in repository subsystems for the assessment of the integrity of a given (generic) repository arrangement will be discussed. The interdisciplinary team combines experimental work in the lab, in the underground rock laboratory and environmental simulations in order to achieve process understanding across variable scales.
Theresa Hennig and Michael Kühn
Adv. Geosci., 56, 97–105, https://doi.org/10.5194/adgeo-56-97-2021, https://doi.org/10.5194/adgeo-56-97-2021, 2021
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Uranium migration in the Swiss Opalinus Clay is used as an example to quantify the influence of varying values of a stability constant in the underlying thermodynamic database within the law of mass action on the migration lengths. The difference of the stability constant of 1.33 log units lead to changed migration lengths of 5 m to 7 m. With a maximum diffusion distance of 22 m the influence of an uncertain stability constant is negligible for the host rock scale.
Morgan Tranter, Maria Wetzel, Marco De Lucia, and Michael Kühn
Adv. Geosci., 56, 57–65, https://doi.org/10.5194/adgeo-56-57-2021, https://doi.org/10.5194/adgeo-56-57-2021, 2021
Short summary
Short summary
Barite formation is an important factor for many use cases of the geological subsurface because it may change the rock.
In this modelling study, the replacement reaction of celestite to barite is investigated.
The steps that were identified to play a role are celestite dissolution followed by two-step precipitation of barite: spontaneous formation of small crystals and their subsequent growth.
Explicitly including the processes improve the usability of the models for quantified prediction.
Marco De Lucia and Michael Kühn
Adv. Geosci., 56, 33–43, https://doi.org/10.5194/adgeo-56-33-2021, https://doi.org/10.5194/adgeo-56-33-2021, 2021
Short summary
Short summary
RedModRphree is an R extension package to leverage the PHREEQC engine for geochemical models, providing convenience functions to efficiently setup computations and program algorithms involving geochemical models. Version 0.3.6 ships with a novel implementation of Pourbaix (potential/pH) diagram computation which considers the full speciation of the solution at each diagram point.
Viktor J. Bruckman, Gregor Giebel, Christopher Juhlin, Sonja Martens, Antonio P. Rinaldi, and Michael Kühn
Adv. Geosci., 56, 13–18, https://doi.org/10.5194/adgeo-56-13-2021, https://doi.org/10.5194/adgeo-56-13-2021, 2021
Marco De Lucia and Michael Kühn
Geosci. Model Dev., 14, 4713–4730, https://doi.org/10.5194/gmd-14-4713-2021, https://doi.org/10.5194/gmd-14-4713-2021, 2021
Short summary
Short summary
DecTree evaluates a hierarchical coupling method for reactive transport simulations in which pre-trained surrogate models are used to speed up the geochemical subprocess, and equation-based
full-physicssimulations are called only if the surrogate predictions are implausible. Furthermore, we devise and evaluate a decision tree surrogate approach designed to inject domain knowledge of the surrogate by defining engineered features based on law of mass action or stoichiometric reaction equations.
Melissa Präg, Ivy Becker, Christoph Hilgers, Thomas R. Walter, and Michael Kühn
Adv. Geosci., 54, 165–171, https://doi.org/10.5194/adgeo-54-165-2020, https://doi.org/10.5194/adgeo-54-165-2020, 2020
Short summary
Short summary
Utilization of geothermal reservoirs as alternative energy source is becoming increasingly important worldwide. Here, we studied the surface expression of a warm water reservoir in Waiwera, New Zealand, that has been known for many centuries but remained little explored. Using thermal infrared cameras we were able to show renewed activity of the hot springs on the beachfront and identified faults and fractures as important fluid pathways, as well as individual fluid conducting lithologies.
Michael Kühn, Natalie C. Nakaten, and Thomas Kempka
Adv. Geosci., 54, 173–178, https://doi.org/10.5194/adgeo-54-173-2020, https://doi.org/10.5194/adgeo-54-173-2020, 2020
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Energy supply in Germany is subject to a profound change. The present paper addresses the German potential of storing excess energy from renewable power sources in the geological subsurface. Wind and solar electricity can be transformed into hydrogen, and with carbon dioxide subsequently into methane. The current potential for combined subsurface storage of methane and carbon dioxide allows to store far more than required to date and is estimated to provide the entire coverage in 2050.
Maria Wetzel, Thomas Kempka, and Michael Kühn
Adv. Geosci., 54, 33–39, https://doi.org/10.5194/adgeo-54-33-2020, https://doi.org/10.5194/adgeo-54-33-2020, 2020
Sonja Martens, Maren Brehme, Viktor J. Bruckman, Christopher Juhlin, Johannes Miocic, Antonio P. Rinaldi, and Michael Kühn
Adv. Geosci., 54, 1–5, https://doi.org/10.5194/adgeo-54-1-2020, https://doi.org/10.5194/adgeo-54-1-2020, 2020
Márk Somogyvári, Michael Kühn, and Sebastian Reich
Adv. Geosci., 49, 207–214, https://doi.org/10.5194/adgeo-49-207-2019, https://doi.org/10.5194/adgeo-49-207-2019, 2019
Sonja Martens, Christopher Juhlin, Viktor J. Bruckman, Gregor Giebel, Thomas Nagel, Antonio P. Rinaldi, and Michael Kühn
Adv. Geosci., 49, 31–35, https://doi.org/10.5194/adgeo-49-31-2019, https://doi.org/10.5194/adgeo-49-31-2019, 2019
Michael Kühn and Tim Schöne
Adv. Geosci., 45, 235–241, https://doi.org/10.5194/adgeo-45-235-2018, https://doi.org/10.5194/adgeo-45-235-2018, 2018
Short summary
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The water level of the Waiwera geothermal reservoir increased in the hours and days after the Kaikoura earthquake on 14 November 2016. We determined in a continuous time series consisting of monthly means of water level data and pumping rates starting in 1986 if events above a certain strength alter groundwater dynamics at Waiwera. A clear correlation cannot be proven but none of the recorded earthquakes led to such a high energy density in Waiwera as the Kaikoura event did.
Sonja Martens, Christopher Juhlin, Viktor J. Bruckman, Kristen Mitchell, Luke Griffiths, and Michael Kühn
Adv. Geosci., 45, 163–166, https://doi.org/10.5194/adgeo-45-163-2018, https://doi.org/10.5194/adgeo-45-163-2018, 2018
Elena Tillner, Maria Langer, Thomas Kempka, and Michael Kühn
Hydrol. Earth Syst. Sci., 20, 1049–1067, https://doi.org/10.5194/hess-20-1049-2016, https://doi.org/10.5194/hess-20-1049-2016, 2016
Short summary
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The degree of shallow aquifer salinisation triggered by fluid injection into deeper brine-bearing aquifers and brine upward migration through hydraulically conductive faults strongly depends on the regional depth of the freshwater-saltwater boundary, since displaced brines originate only from the upper fault damage zones in the study area. The highest local salinity increase in shallow aquifers occurs in case of closed model boundaries and low fault damage zone volumes.
M. De Lucia, T. Kempka, and M. Kühn
Geosci. Model Dev., 8, 279–294, https://doi.org/10.5194/gmd-8-279-2015, https://doi.org/10.5194/gmd-8-279-2015, 2015
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Geosci. Model Dev., 17, 1153–1173, https://doi.org/10.5194/gmd-17-1153-2024, https://doi.org/10.5194/gmd-17-1153-2024, 2024
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Geosci. Model Dev., 17, 911–929, https://doi.org/10.5194/gmd-17-911-2024, https://doi.org/10.5194/gmd-17-911-2024, 2024
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Jarno Verkaik, Edwin H. Sutanudjaja, Gualbert H. P. Oude Essink, Hai Xiang Lin, and Marc F. P. Bierkens
Geosci. Model Dev., 17, 275–300, https://doi.org/10.5194/gmd-17-275-2024, https://doi.org/10.5194/gmd-17-275-2024, 2024
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This paper presents the parallel PCR-GLOBWB global-scale groundwater model at 30 arcsec resolution (~1 km at the Equator). Named GLOBGM v1.0, this model is a follow-up of the 5 arcmin (~10 km) model, aiming for a higher-resolution simulation of worldwide fresh groundwater reserves under climate change and excessive pumping. For a long transient simulation using a parallel prototype of MODFLOW 6, we show that our implementation is efficient for a relatively low number of processor cores.
Han Qiu, Gautam Bisht, Lingcheng Li, Dalei Hao, and Donghui Xu
Geosci. Model Dev., 17, 143–167, https://doi.org/10.5194/gmd-17-143-2024, https://doi.org/10.5194/gmd-17-143-2024, 2024
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We developed and validated an inter-grid-cell lateral groundwater flow model for both saturated and unsaturated zone in the ELMv2.0 framework. The developed model was benchmarked against PFLOTRAN, a 3D subsurface flow and transport model and showed comparable performance with PFLOTRAN. The developed model was also applied to the Little Washita experimental watershed. The spatial pattern of simulated groundwater table depth agreed well with the global groundwater table benchmark dataset.
Daniel Boateng and Sebastian G. Mutz
Geosci. Model Dev., 16, 6479–6514, https://doi.org/10.5194/gmd-16-6479-2023, https://doi.org/10.5194/gmd-16-6479-2023, 2023
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We present an open-source Python framework for performing empirical-statistical downscaling of climate information, such as precipitation. The user-friendly package comprises all the downscaling cycles including data preparation, model selection, training, and evaluation, designed in an efficient and flexible manner, allowing for quick and reproducible downscaling products. The framework would contribute to climate change impact assessments by generating accurate high-resolution climate data.
Masaya Yoshikai, Takashi Nakamura, Eugene C. Herrera, Rempei Suwa, Rene Rollon, Raghab Ray, Keita Furukawa, and Kazuo Nadaoka
Geosci. Model Dev., 16, 5847–5863, https://doi.org/10.5194/gmd-16-5847-2023, https://doi.org/10.5194/gmd-16-5847-2023, 2023
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Due to complex root system structures, representing the impacts of Rhizophora mangroves on flow in hydrodynamic models has been challenging. This study presents a new drag and turbulence model that leverages an empirical model for root systems. The model can be applied without rigorous measurements of root structures and showed high performance in flow simulations; this may provide a better understanding of hydrodynamics and related transport processes in Rhizophora mangrove forests.
Hao Chen, Tiejun Wang, Yonggen Zhang, Yun Bai, and Xi Chen
Geosci. Model Dev., 16, 5685–5701, https://doi.org/10.5194/gmd-16-5685-2023, https://doi.org/10.5194/gmd-16-5685-2023, 2023
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Effectively assembling multiple models for approaching a benchmark solution remains a long-standing issue for various geoscience domains. We here propose an automated machine learning-assisted ensemble framework (AutoML-Ens) that attempts to resolve this challenge. Results demonstrate the great potential of AutoML-Ens for improving estimations due to its two unique features, i.e., assigning dynamic weights for candidate models and taking full advantage of AutoML-assisted workflow.
Guta Wakbulcho Abeshu, Fuqiang Tian, Thomas Wild, Mengqi Zhao, Sean Turner, A. F. M. Kamal Chowdhury, Chris R. Vernon, Hongchang Hu, Yuan Zhuang, Mohamad Hejazi, and Hong-Yi Li
Geosci. Model Dev., 16, 5449–5472, https://doi.org/10.5194/gmd-16-5449-2023, https://doi.org/10.5194/gmd-16-5449-2023, 2023
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Most existing global hydrologic models do not explicitly represent hydropower reservoirs. We are introducing a new water management module to Xanthos that distinguishes between the operational characteristics of irrigation, hydropower, and flood control reservoirs. We show that this explicit representation of hydropower reservoirs can lead to a significantly more realistic simulation of reservoir storage and releases in over 44 % of the hydropower reservoirs included in this study.
Javier Diez-Sierra, Salvador Navas, and Manuel del Jesus
Geosci. Model Dev., 16, 5035–5048, https://doi.org/10.5194/gmd-16-5035-2023, https://doi.org/10.5194/gmd-16-5035-2023, 2023
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NEOPRENE is an open-source, freely available library allowing scientists and practitioners to generate synthetic time series and maps of rainfall. These outputs will help to explore plausible events that were never observed in the past but may occur in the near future and to generate possible future events under climate change conditions. The paper shows how to use the library to downscale daily precipitation and how to use synthetic generation to improve our characterization of extreme events.
Adam Pasik, Alexander Gruber, Wolfgang Preimesberger, Domenico De Santis, and Wouter Dorigo
Geosci. Model Dev., 16, 4957–4976, https://doi.org/10.5194/gmd-16-4957-2023, https://doi.org/10.5194/gmd-16-4957-2023, 2023
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We apply the exponential filter (EF) method to satellite soil moisture retrievals to estimate the water content in the unobserved root zone globally from 2002–2020. Quality assessment against an independent dataset shows satisfactory results. Error characterization is carried out using the standard uncertainty propagation law and empirically estimated values of EF model structural uncertainty and parameter uncertainty. This is followed by analysis of temporal uncertainty variations.
Po-Wei Huang, Bernd Flemisch, Chao-Zhong Qin, Martin O. Saar, and Anozie Ebigbo
Geosci. Model Dev., 16, 4767–4791, https://doi.org/10.5194/gmd-16-4767-2023, https://doi.org/10.5194/gmd-16-4767-2023, 2023
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Water in natural environments consists of many ions. Ions are electrically charged and exert electric forces on each other. We discuss whether the electric forces are relevant in describing mixing and reaction processes in natural environments. By comparing our computer simulations to lab experiments in literature, we show that the electric interactions between ions can play an essential role in mixing and reaction processes, in which case they should not be neglected in numerical modeling.
Edward R. Jones, Marc F. P. Bierkens, Niko Wanders, Edwin H. Sutanudjaja, Ludovicus P. H. van Beek, and Michelle T. H. van Vliet
Geosci. Model Dev., 16, 4481–4500, https://doi.org/10.5194/gmd-16-4481-2023, https://doi.org/10.5194/gmd-16-4481-2023, 2023
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DynQual is a new high-resolution global water quality model for simulating total dissolved solids, biological oxygen demand and fecal coliform as indicators of salinity, organic pollution and pathogen pollution, respectively. Output data from DynQual can supplement the observational record of water quality data, which is highly fragmented across space and time, and has the potential to inform assessments in a broad range of fields including ecological, human health and water scarcity studies.
Hugo Delottier, John Doherty, and Philip Brunner
Geosci. Model Dev., 16, 4213–4231, https://doi.org/10.5194/gmd-16-4213-2023, https://doi.org/10.5194/gmd-16-4213-2023, 2023
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Long run times are usually a barrier to the quantification and reduction of predictive uncertainty with complex hydrological models. Data space inversion (DSI) provides an alternative and highly model-run-efficient method for uncertainty quantification. This paper demonstrates DSI's ability to robustly quantify predictive uncertainty and extend the methodology to provide practical metrics that can guide data acquisition and analysis to achieve goals of decision-support modelling.
Heloisa Ehalt Macedo, Bernhard Lehner, Jim Nicell, and Günther Grill
EGUsphere, https://doi.org/10.5194/egusphere-2023-1590, https://doi.org/10.5194/egusphere-2023-1590, 2023
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Pharmaceuticals and household chemicals released into surface waters through wastewater pose risks to aquatic ecosystems and human health. HydroFATE, a new global model, estimates contaminant concentrations in rivers, helping identify areas of elevated exposure. It predicted concentrations above ecological thresholds of the antibiotic sulfamethoxazole in 390,000 km of rivers worldwide. HydroFATE can guide monitoring and mitigation efforts to safeguard water systems and human well-being.
Pedro Felipe Arboleda-Obando, Agnès Ducharne, Zun Yin, and Philippe Ciais
EGUsphere, https://doi.org/10.5194/egusphere-2023-1323, https://doi.org/10.5194/egusphere-2023-1323, 2023
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In this study, we show a new irrigation scheme included in ORCHIDEE land surface model. The new irrigation scheme restraint irrigation due to water shortage, includes water adduction, and represents environmental limits and facility to access water due to infrastructure in a simple way. Our results show that the new irrigation scheme helps simulating acceptable land surface conditions and fluxes in irrigated areas, even if there are difficulties due to shortcomings and limited information.
Zhipin Ai and Naota Hanasaki
Geosci. Model Dev., 16, 3275–3290, https://doi.org/10.5194/gmd-16-3275-2023, https://doi.org/10.5194/gmd-16-3275-2023, 2023
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Simultaneously simulating food production and the requirements and availability of water resources in a spatially explicit manner within a single framework remains challenging on a global scale. Here, we successfully enhanced the global hydrological model H08 that considers human water use and management to simulate the yields of four major staple crops: maize, wheat, rice, and soybean. Our improved model will be beneficial for advancing global food–water nexus studies in the future.
Emilie Rouzies, Claire Lauvernet, Bruno Sudret, and Arthur Vidard
Geosci. Model Dev., 16, 3137–3163, https://doi.org/10.5194/gmd-16-3137-2023, https://doi.org/10.5194/gmd-16-3137-2023, 2023
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Water and pesticide transfer models are complex and should be simplified to be used in decision support. Indeed, these models simulate many spatial processes in interaction, involving a large number of parameters. Sensitivity analysis allows us to select the most influential input parameters, but it has to be adapted to spatial modelling. This study will identify relevant methods that can be transposed to any hydrological and water quality model and improve the fate of pesticide knowledge.
Guoding Chen, Ke Zhang, Sheng Wang, Yi Xia, and Lijun Chao
Geosci. Model Dev., 16, 2915–2937, https://doi.org/10.5194/gmd-16-2915-2023, https://doi.org/10.5194/gmd-16-2915-2023, 2023
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In this study, we developed a novel modeling system called iHydroSlide3D v1.0 by coupling a modified a 3D landslide model with a distributed hydrology model. The model is able to apply flexibly different simulating resolutions for hydrological and slope stability submodules and gain a high computational efficiency through parallel computation. The test results in the Yuehe River basin, China, show a good predicative capability for cascading flood–landslide events.
Jens A. de Bruijn, Mikhail Smilovic, Peter Burek, Luca Guillaumot, Yoshihide Wada, and Jeroen C. J. H. Aerts
Geosci. Model Dev., 16, 2437–2454, https://doi.org/10.5194/gmd-16-2437-2023, https://doi.org/10.5194/gmd-16-2437-2023, 2023
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We present a computer simulation model of the hydrological system and human system, which can simulate the behaviour of individual farmers and their interactions with the water system at basin scale to assess how the systems have evolved and are projected to evolve in the future. For example, we can simulate the effect of subsidies provided on investment in adaptation measures and subsequent effects in the hydrological system, such as a lowering of the groundwater table or reservoir level.
Matthew D. Wilson and Thomas J. Coulthard
Geosci. Model Dev., 16, 2415–2436, https://doi.org/10.5194/gmd-16-2415-2023, https://doi.org/10.5194/gmd-16-2415-2023, 2023
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During flooding, the sources of water that inundate a location can influence impacts such as pollution. However, methods to trace water sources in flood events are currently only available in complex, computationally expensive hydraulic models. We propose a simplified method which can be added to efficient, reduced-complexity model codes, enabling an improved understanding of flood dynamics and its impacts. We demonstrate its application for three sites at a range of spatial and temporal scales.
Bibi S. Naz, Wendy Sharples, Yueling Ma, Klaus Goergen, and Stefan Kollet
Geosci. Model Dev., 16, 1617–1639, https://doi.org/10.5194/gmd-16-1617-2023, https://doi.org/10.5194/gmd-16-1617-2023, 2023
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It is challenging to apply a high-resolution integrated land surface and groundwater model over large spatial scales. In this paper, we demonstrate the application of such a model over a pan-European domain at 3 km resolution and perform an extensive evaluation of simulated water states and fluxes by comparing with in situ and satellite data. This study can serve as a benchmark and baseline for future studies of climate change impact projections and for hydrological forecasting.
Jiangtao Liu, David Hughes, Farshid Rahmani, Kathryn Lawson, and Chaopeng Shen
Geosci. Model Dev., 16, 1553–1567, https://doi.org/10.5194/gmd-16-1553-2023, https://doi.org/10.5194/gmd-16-1553-2023, 2023
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Under-monitored regions like Africa need high-quality soil moisture predictions to help with food production, but it is not clear if soil moisture processes are similar enough around the world for data-driven models to maintain accuracy. We present a deep-learning-based soil moisture model that learns from both in situ data and satellite data and performs better than satellite products at the global scale. These results help us apply our model globally while better understanding its limitations.
Daniel Caviedes-Voullième, Mario Morales-Hernández, Matthew R. Norman, and Ilhan Özgen-Xian
Geosci. Model Dev., 16, 977–1008, https://doi.org/10.5194/gmd-16-977-2023, https://doi.org/10.5194/gmd-16-977-2023, 2023
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This paper introduces the SERGHEI framework and a solver for shallow-water problems. Such models, often used for surface flow and flood modelling, are computationally intense. In recent years the trends to increase computational power have changed, requiring models to adapt to new hardware and new software paradigms. SERGHEI addresses these challenges, allowing surface flow simulation to be enabled on the newest and upcoming consumer hardware and supercomputers very efficiently.
Andrew M. Ireson, Raymond J. Spiteri, Martyn P. Clark, and Simon A. Mathias
Geosci. Model Dev., 16, 659–677, https://doi.org/10.5194/gmd-16-659-2023, https://doi.org/10.5194/gmd-16-659-2023, 2023
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Richards' equation (RE) is used to describe the movement and storage of water in a soil profile and is a component of many hydrological and earth-system models. Solving RE numerically is challenging due to the non-linearities in the properties. Here, we present a simple but effective and mass-conservative solution to solving RE, which is ideal for teaching/learning purposes but also useful in prototype models that are used to explore alternative process representations.
Fang Wang, Di Tian, and Mark Carroll
Geosci. Model Dev., 16, 535–556, https://doi.org/10.5194/gmd-16-535-2023, https://doi.org/10.5194/gmd-16-535-2023, 2023
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Gridded precipitation datasets suffer from biases and coarse resolutions. We developed a customized deep learning (DL) model to bias-correct and downscale gridded precipitation data using radar observations. The results showed that the customized DL model can generate improved precipitation at fine resolutions where regular DL and statistical methods experience challenges. The new model can be used to improve precipitation estimates, especially for capturing extremes at smaller scales.
Malak Sadki, Simon Munier, Aaron Boone, and Sophie Ricci
Geosci. Model Dev., 16, 427–448, https://doi.org/10.5194/gmd-16-427-2023, https://doi.org/10.5194/gmd-16-427-2023, 2023
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Predicting water resource evolution is a key challenge for the coming century.
Anthropogenic impacts on water resources, and particularly the effects of dams and reservoirs on river flows, are still poorly known and generally neglected in global hydrological studies. A parameterized reservoir model is reproduced to compute monthly releases in Spanish anthropized river basins. For global application, an exhaustive sensitivity analysis of the model parameters is performed on flows and volumes.
Nicolas Flipo, Nicolas Gallois, and Jonathan Schuite
Geosci. Model Dev., 16, 353–381, https://doi.org/10.5194/gmd-16-353-2023, https://doi.org/10.5194/gmd-16-353-2023, 2023
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A new approach is proposed to fit hydrological or land surface models, which suffer from large uncertainties in terms of water partitioning between fast runoff and slow infiltration from small watersheds to regional or continental river basins. It is based on the analysis of hydrosystem behavior in the frequency domain, which serves as a basis for estimating water flows in the time domain with a physically based model. It opens the way to significant breakthroughs in hydrological modeling.
Joachim Meyer, John Horel, Patrick Kormos, Andrew Hedrick, Ernesto Trujillo, and S. McKenzie Skiles
Geosci. Model Dev., 16, 233–250, https://doi.org/10.5194/gmd-16-233-2023, https://doi.org/10.5194/gmd-16-233-2023, 2023
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Freshwater resupply from seasonal snow in the mountains is changing. Current water prediction methods from snow rely on historical data excluding the change and can lead to errors. This work presented and evaluated an alternative snow-physics-based approach. The results in a test watershed were promising, and future improvements were identified. Adaptation to current forecast environments would improve resilience to the seasonal snow changes and helps ensure the accuracy of resupply forecasts.
Shuqi Lin, Donald C. Pierson, and Jorrit P. Mesman
Geosci. Model Dev., 16, 35–46, https://doi.org/10.5194/gmd-16-35-2023, https://doi.org/10.5194/gmd-16-35-2023, 2023
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The risks brought by the proliferation of algal blooms motivate the improvement of bloom forecasting tools, but algal blooms are complexly controlled and difficult to predict. Given rapid growth of monitoring data and advances in computation, machine learning offers an alternative prediction methodology. This study tested various machine learning workflows in a dimictic mesotrophic lake and gave promising predictions of the seasonal variations and the timing of algal blooms.
Thibault Hallouin, Richard J. Ellis, Douglas B. Clark, Simon J. Dadson, Andrew G. Hughes, Bryan N. Lawrence, Grenville M. S. Lister, and Jan Polcher
Geosci. Model Dev., 15, 9177–9196, https://doi.org/10.5194/gmd-15-9177-2022, https://doi.org/10.5194/gmd-15-9177-2022, 2022
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A new framework for modelling the water cycle in the land system has been implemented. It considers the hydrological cycle as three interconnected components, bringing flexibility in the choice of the physical processes and their spatio-temporal resolutions. It is designed to foster collaborations between land surface, hydrological, and groundwater modelling communities to develop the next-generation of land system models for integration in Earth system models.
Seyed Mahmood Hamze-Ziabari, Ulrich Lemmin, Frédéric Soulignac, Mehrshad Foroughan, and David Andrew Barry
Geosci. Model Dev., 15, 8785–8807, https://doi.org/10.5194/gmd-15-8785-2022, https://doi.org/10.5194/gmd-15-8785-2022, 2022
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A procedure combining numerical simulations, remote sensing, and statistical analyses is developed to detect large-scale current systems in large lakes. By applying this novel procedure in Lake Geneva, strategies for detailed transect field studies of the gyres and eddies were developed. Unambiguous field evidence of 3D gyre/eddy structures in full agreement with predictions confirmed the robustness of the proposed procedure.
Kristina Šarović, Melita Burić, and Zvjezdana B. Klaić
Geosci. Model Dev., 15, 8349–8375, https://doi.org/10.5194/gmd-15-8349-2022, https://doi.org/10.5194/gmd-15-8349-2022, 2022
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We develop a simple 1-D model for the prediction of the vertical temperature profiles in small, warm lakes. The model uses routinely measured meteorological variables as well as UVB radiation and yearly mean temperature data. It can be used for the assessment of the onset and duration of lake stratification periods when water temperature data are unavailable, which can be useful for various lake studies performed in other scientific fields, such as biology, geochemistry, and sedimentology.
Jason A. Clark, Elchin E. Jafarov, Ken D. Tape, Benjamin M. Jones, and Victor Stepanenko
Geosci. Model Dev., 15, 7421–7448, https://doi.org/10.5194/gmd-15-7421-2022, https://doi.org/10.5194/gmd-15-7421-2022, 2022
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Lakes in the Arctic are important reservoirs of heat. Under climate warming scenarios, we expect Arctic lakes to warm the surrounding frozen ground. We simulate water temperatures in three Arctic lakes in northern Alaska over several years. Our results show that snow depth and lake ice strongly affect water temperatures during the frozen season and that more heat storage by lakes would enhance thawing of frozen ground.
Danielle S. Grogan, Shan Zuidema, Alex Prusevich, Wilfred M. Wollheim, Stanley Glidden, and Richard B. Lammers
Geosci. Model Dev., 15, 7287–7323, https://doi.org/10.5194/gmd-15-7287-2022, https://doi.org/10.5194/gmd-15-7287-2022, 2022
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This paper describes the University of New Hampshire's water balance model (WBM). This model simulates the land surface components of the global water cycle and includes water extractions for use by humans for agricultural, domestic, and industrial purposes. A new feature is described that permits water source tracking through the water cycle, which has implications for water resource management. This paper was written to describe a long-used model and presents its first open-source version.
Luca Guillaumot, Mikhail Smilovic, Peter Burek, Jens de Bruijn, Peter Greve, Taher Kahil, and Yoshihide Wada
Geosci. Model Dev., 15, 7099–7120, https://doi.org/10.5194/gmd-15-7099-2022, https://doi.org/10.5194/gmd-15-7099-2022, 2022
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We develop and test the first large-scale hydrological model at regional scale with a very high spatial resolution that includes a water management and groundwater flow model. This study infers the impact of surface and groundwater-based irrigation on groundwater recharge and on evapotranspiration in both irrigated and non-irrigated areas. We argue that water table recorded in boreholes can be used as validation data if water management is well implemented and spatial resolution is ≤ 100 m.
Robert Chlumsky, James R. Craig, Simon G. M. Lin, Sarah Grass, Leland Scantlebury, Genevieve Brown, and Rezgar Arabzadeh
Geosci. Model Dev., 15, 7017–7030, https://doi.org/10.5194/gmd-15-7017-2022, https://doi.org/10.5194/gmd-15-7017-2022, 2022
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We introduce the open-source RavenR package, which has been built to support the use of the hydrologic modelling framework Raven. The R package contains many functions that may be useful in each step of the model-building process, including preparing model input files, running the model, and analyzing the outputs. We present six reproducible use cases of the RavenR package for the Liard River basin in Canada to demonstrate how it may be deployed.
Bahar Bahrami, Anke Hildebrandt, Stephan Thober, Corinna Rebmann, Rico Fischer, Luis Samaniego, Oldrich Rakovec, and Rohini Kumar
Geosci. Model Dev., 15, 6957–6984, https://doi.org/10.5194/gmd-15-6957-2022, https://doi.org/10.5194/gmd-15-6957-2022, 2022
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Leaf area index (LAI) and gross primary productivity (GPP) are crucial components to carbon cycle, and are closely linked to water cycle in many ways. We develop a Parsimonious Canopy Model (PCM) to simulate GPP and LAI at stand scale, and show its applicability over a diverse range of deciduous broad-leaved forest biomes. With its modular structure, the PCM is able to adapt with existing data requirements, and run in either a stand-alone mode or as an interface linked to hydrologic models.
Stefania Camici, Gabriele Giuliani, Luca Brocca, Christian Massari, Angelica Tarpanelli, Hassan Hashemi Farahani, Nico Sneeuw, Marco Restano, and Jérôme Benveniste
Geosci. Model Dev., 15, 6935–6956, https://doi.org/10.5194/gmd-15-6935-2022, https://doi.org/10.5194/gmd-15-6935-2022, 2022
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This paper presents an innovative approach, STREAM (SaTellite-based Runoff Evaluation And Mapping), to derive daily river discharge and runoff estimates from satellite observations of soil moisture, precipitation, and terrestrial total water storage anomalies. Potentially useful for multiple operational and scientific applications, the added value of the STREAM approach is the ability to increase knowledge on the natural processes, human activities, and their interactions on the land.
Ji Li, Daoxian Yuan, Fuxi Zhang, Jiao Liu, and Mingguo Ma
Geosci. Model Dev., 15, 6581–6600, https://doi.org/10.5194/gmd-15-6581-2022, https://doi.org/10.5194/gmd-15-6581-2022, 2022
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A new karst hydrological model (the QMG model) is developed to simulate and predict the floods in karst trough valley basins. Unlike the complex structure and parameters of current karst groundwater models, this model has a simple double-layered structure with few parameters and decreases the demand for modeling data in karst areas. The flood simulation results based on the QMG model of the Qingmuguan karst trough valley basin are satisfactory, indicating the suitability of the model simulation.
Luca Trotter, Wouter J. M. Knoben, Keirnan J. A. Fowler, Margarita Saft, and Murray C. Peel
Geosci. Model Dev., 15, 6359–6369, https://doi.org/10.5194/gmd-15-6359-2022, https://doi.org/10.5194/gmd-15-6359-2022, 2022
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MARRMoT is a piece of software that emulates 47 common models for hydrological simulations. It can be used to run and calibrate these models within a common environment as well as to easily modify them. We restructured and recoded MARRMoT in order to make the models run faster and to simplify their use, while also providing some new features. This new MARRMoT version runs models on average 3.6 times faster while maintaining very strong consistency in their outputs to the previous version.
Zhi Li, Shang Gao, Mengye Chen, Jonathan Gourley, Naoki Mizukami, and Yang Hong
Geosci. Model Dev., 15, 6181–6196, https://doi.org/10.5194/gmd-15-6181-2022, https://doi.org/10.5194/gmd-15-6181-2022, 2022
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Operational streamflow prediction at a continental scale is critical for national water resources management. However, limited computational resources often impede such processes, with streamflow routing being one of the most time-consuming parts. This study presents a recent development of a hydrologic system that incorporates a vector-based routing scheme with a lake module that markedly speeds up streamflow prediction. Moreover, accuracy is improved and flood false alarms are mitigated.
Willem J. van Verseveld, Albrecht H. Weerts, Martijn Visser, Joost Buitink, Ruben O. Imhoff, Hélène Boisgontier, Laurène Bouaziz, Dirk Eilander, Mark Hegnauer, Corine ten Velden, and Bobby Russell
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2022-182, https://doi.org/10.5194/gmd-2022-182, 2022
Revised manuscript accepted for GMD
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We present the wflow_sbm distributed hydrologic model, recently released by Deltares, as part of the Wflow.jl open-source modelling framework in the programming language Julia. Wflow_sbm has a fast run-time making it suitable for large-scale modelling. Wflow_sbm models can be set a priori for any catchment with the Python tool HydroMT-Wflow based on globally available datasets, which results in satisfactory to good performance (without much tuning). We show this for a number of specific cases.
Suyeon Choi and Yeonjoo Kim
Geosci. Model Dev., 15, 5967–5985, https://doi.org/10.5194/gmd-15-5967-2022, https://doi.org/10.5194/gmd-15-5967-2022, 2022
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Here we present the cGAN-based precipitation nowcasting model, named Rad-cGAN, trained to predict a radar reflectivity map with a lead time of 10 min. Rad-cGAN showed superior performance at a lead time of up to 90 min compared with the reference models. Furthermore, we demonstrate the successful implementation of the transfer learning strategies using pre-trained Rad-cGAN to develop the models for different dam domains.
Rolf Hut, Niels Drost, Nick van de Giesen, Ben van Werkhoven, Banafsheh Abdollahi, Jerom Aerts, Thomas Albers, Fakhereh Alidoost, Bouwe Andela, Jaro Camphuijsen, Yifat Dzigan, Ronald van Haren, Eric Hutton, Peter Kalverla, Maarten van Meersbergen, Gijs van den Oord, Inti Pelupessy, Stef Smeets, Stefan Verhoeven, Martine de Vos, and Berend Weel
Geosci. Model Dev., 15, 5371–5390, https://doi.org/10.5194/gmd-15-5371-2022, https://doi.org/10.5194/gmd-15-5371-2022, 2022
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With the eWaterCycle platform, we are providing the hydrological community with a platform to conduct their research that is fully compatible with the principles of both open science and FAIR science. The eWatercyle platform gives easy access to well-known hydrological models, big datasets and example experiments. Using eWaterCycle hydrologists can easily compare the results from different models, couple models and do more complex hydrological computational research.
Hsi-Kai Chou, Ana Maria Heuminski de Avila, and Michaela Bray
Geosci. Model Dev., 15, 5233–5240, https://doi.org/10.5194/gmd-15-5233-2022, https://doi.org/10.5194/gmd-15-5233-2022, 2022
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Land surface models allow us to understand and investigate the cause and effect of environmental process changes. Therefore, this type of model is increasingly used for hydrological assessments. Here we explore the possibility of this approach using a case study in the Atibaia River basin, which serves as a major water supply for the metropolitan regions of Campinas and São Paulo, Brazil. We evaluated the model performance and use the model to simulate the basin hydrology.
Malgorzata Golub, Wim Thiery, Rafael Marcé, Don Pierson, Inne Vanderkelen, Daniel Mercado-Bettin, R. Iestyn Woolway, Luke Grant, Eleanor Jennings, Benjamin M. Kraemer, Jacob Schewe, Fang Zhao, Katja Frieler, Matthias Mengel, Vasiliy Y. Bogomolov, Damien Bouffard, Marianne Côté, Raoul-Marie Couture, Andrey V. Debolskiy, Bram Droppers, Gideon Gal, Mingyang Guo, Annette B. G. Janssen, Georgiy Kirillin, Robert Ladwig, Madeline Magee, Tadhg Moore, Marjorie Perroud, Sebastiano Piccolroaz, Love Raaman Vinnaa, Martin Schmid, Tom Shatwell, Victor M. Stepanenko, Zeli Tan, Bronwyn Woodward, Huaxia Yao, Rita Adrian, Mathew Allan, Orlane Anneville, Lauri Arvola, Karen Atkins, Leon Boegman, Cayelan Carey, Kyle Christianson, Elvira de Eyto, Curtis DeGasperi, Maria Grechushnikova, Josef Hejzlar, Klaus Joehnk, Ian D. Jones, Alo Laas, Eleanor B. Mackay, Ivan Mammarella, Hampus Markensten, Chris McBride, Deniz Özkundakci, Miguel Potes, Karsten Rinke, Dale Robertson, James A. Rusak, Rui Salgado, Leon van der Linden, Piet Verburg, Danielle Wain, Nicole K. Ward, Sabine Wollrab, and Galina Zdorovennova
Geosci. Model Dev., 15, 4597–4623, https://doi.org/10.5194/gmd-15-4597-2022, https://doi.org/10.5194/gmd-15-4597-2022, 2022
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Lakes and reservoirs are warming across the globe. To better understand how lakes are changing and to project their future behavior amidst various sources of uncertainty, simulations with a range of lake models are required. This in turn requires international coordination across different lake modelling teams worldwide. Here we present a protocol for and results from coordinated simulations of climate change impacts on lakes worldwide.
Verena Bessenbacher, Sonia Isabelle Seneviratne, and Lukas Gudmundsson
Geosci. Model Dev., 15, 4569–4596, https://doi.org/10.5194/gmd-15-4569-2022, https://doi.org/10.5194/gmd-15-4569-2022, 2022
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Earth observations have many missing values. They are often filled using information from spatial and temporal contexts that mostly ignore information from related observed variables. We propose the gap-filling method CLIMFILL that additionally uses information from related variables. We test CLIMFILL using gap-free reanalysis data of variables related to soil–moisture climate interactions. CLIMFILL creates estimates for the missing values that recover the original dependence structure.
Anthony Bernus and Catherine Ottlé
Geosci. Model Dev., 15, 4275–4295, https://doi.org/10.5194/gmd-15-4275-2022, https://doi.org/10.5194/gmd-15-4275-2022, 2022
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The lake model FLake was coupled to the ORCHIDEE land surface model to simulate lake energy balance at global scale with a multi-tile approach. Several simulations were performed with various atmospheric reanalyses and different lake depth parameterizations. The simulated lake surface temperature showed good agreement with observations (RMSEs of the order of 3 °C). We showed the large impact of the atmospheric forcing on lake temperature. We highlighted systematic errors on ice cover phenology.
Cited articles
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Short summary
POET is a parallel reactive transport simulator which implements a mechanism to store and reuse previous results of geochemical simulations through distributed hash tables. POET parallelizes chemistry using a master/worker design with noncontiguous grid partitions to maximize its efficiency and load balance on shared-memory machines and compute clusters.
POET is a parallel reactive transport simulator which implements a mechanism to store and reuse...
