Articles | Volume 12, issue 3
https://doi.org/10.5194/gmd-12-1009-2019
© Author(s) 2019. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-12-1009-2019
© Author(s) 2019. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Model description paper
| 
21 Mar 2019
Model description paper |
| 21 Mar 2019
| 21 Mar 2019
FESOM-C v.2: coastal dynamics on hybrid unstructured meshes
Alfred Wegener Institute for Polar and Marine Research, Bremerhaven, Germany
Shirshov Institute of Oceanology RAS, Moscow, Russia
Vera Fofonova
Alfred Wegener Institute for Polar and Marine Research, Bremerhaven, Germany
Ivan Kuznetsov
Alfred Wegener Institute for Polar and Marine Research, Bremerhaven, Germany
Sergey Danilov
Alfred Wegener Institute for Polar and Marine Research, Bremerhaven, Germany
A. M. Obukhov Institute of Atmospheric Physics RAS, Moscow, Russia
Jacobs University, Bremen, Germany
Natalja Rakowsky
Alfred Wegener Institute for Polar and Marine Research, Bremerhaven, Germany
Sven Harig
Alfred Wegener Institute for Polar and Marine Research, Bremerhaven, Germany
Holger Brix
Institute of Coastal Research, Helmholtz-Zentrum Geesthacht, Geesthacht, Germany
Karen Helen Wiltshire
Alfred Wegener Institute for Polar and Marine Research, Bremerhaven, Germany
Related authors
Ivan Kuznetsov, Benjamin Rabe, Alexey Androsov, Ying-Chih Fang, Mario Hoppmann, Alejandra Quintanilla-Zurita, Sven Harig, Sandra Tippenhauer, Kirstin Schulz, Volker Mohrholz, Ilker Fer, Vera Fofonova, and Markus Janout
Ocean Sci., 20, 759–777, https://doi.org/10.5194/os-20-759-2024, https://doi.org/10.5194/os-20-759-2024, 2024
Short summary
Short summary
Our research introduces a tool for dynamically mapping the Arctic Ocean using data from the MOSAiC experiment. Incorporating extensive data into a model clarifies the ocean's structure and movement. Our findings on temperature, salinity, and currents reveal how water layers mix and identify areas of intense water movement. This enhances understanding of Arctic Ocean dynamics and supports climate impact studies. Our work is vital for comprehending this key region in global climate science.
Alexey Androsov, Sven Harig, Natalia Zamora, Kim Knauer, and Natalja Rakowsky
Nat. Hazards Earth Syst. Sci., 24, 1635–1656, https://doi.org/10.5194/nhess-24-1635-2024, https://doi.org/10.5194/nhess-24-1635-2024, 2024
Short summary
Short summary
Two numerical codes are used in a comparative analysis of the calculation of the tsunami wave due to an earthquake along the Peruvian coast. The comparison primarily evaluates the flow velocity fields in flooded areas. The relative importance of the various parts of the equations is determined, focusing on the nonlinear terms. The influence of the nonlinearity on the degree and volume of flooding, flow velocity, and small-scale fluctuations is determined.
Vera Fofonova, Tuomas Kärnä, Knut Klingbeil, Alexey Androsov, Ivan Kuznetsov, Dmitry Sidorenko, Sergey Danilov, Hans Burchard, and Karen Helen Wiltshire
Geosci. Model Dev., 14, 6945–6975, https://doi.org/10.5194/gmd-14-6945-2021, https://doi.org/10.5194/gmd-14-6945-2021, 2021
Short summary
Short summary
We present a test case of river plume spreading to evaluate coastal ocean models. Our test case reveals the level of numerical mixing (due to parameterizations used and numerical treatment of processes in the model) and the ability of models to reproduce complex dynamics. The major result of our comparative study is that accuracy in reproducing the analytical solution depends less on the type of applied model architecture or numerical grid than it does on the type of advection scheme.
Davide Zanchettin, Sara Bruni, Fabio Raicich, Piero Lionello, Fanny Adloff, Alexey Androsov, Fabrizio Antonioli, Vincenzo Artale, Eugenio Carminati, Christian Ferrarin, Vera Fofonova, Robert J. Nicholls, Sara Rubinetti, Angelo Rubino, Gianmaria Sannino, Giorgio Spada, Rémi Thiéblemont, Michael Tsimplis, Georg Umgiesser, Stefano Vignudelli, Guy Wöppelmann, and Susanna Zerbini
Nat. Hazards Earth Syst. Sci., 21, 2643–2678, https://doi.org/10.5194/nhess-21-2643-2021, https://doi.org/10.5194/nhess-21-2643-2021, 2021
Short summary
Short summary
Relative sea level in Venice rose by about 2.5 mm/year in the past 150 years due to the combined effect of subsidence and mean sea-level rise. We estimate the likely range of mean sea-level rise in Venice by 2100 due to climate changes to be between about 10 and 110 cm, with an improbable yet possible high-end scenario of about 170 cm. Projections of subsidence are not available, but historical evidence demonstrates that they can increase the hazard posed by climatically induced sea-level rise.
Vera Fofonova, Alexey Androsov, Lasse Sander, Ivan Kuznetsov, Felipe Amorim, H. Christian Hass, and Karen H. Wiltshire
Ocean Sci., 15, 1761–1782, https://doi.org/10.5194/os-15-1761-2019, https://doi.org/10.5194/os-15-1761-2019, 2019
Short summary
Short summary
This study is dedicated to tidally induced dynamics in the Sylt-Rømø Bight with a focus on the non-linear component. The tidal residual circulation and asymmetric tidal cycles largely define the circulation pattern, transport and accumulation of sediment, and the distribution of bedforms. The newly obtained high-quality bathymetric data supported the use of high-resolution grids (up to 2 m in the intertidal zone) and elaboration of the details of tidal energy transformation in the domain.
Ivan Kuznetsov, Alexey Androsov, Vera Fofonova, Sergey Danilov, Natalja Rakowsky, Sven Harig, and Karen Helen Wiltshire
Ocean Sci. Discuss., https://doi.org/10.5194/os-2019-103, https://doi.org/10.5194/os-2019-103, 2019
Revised manuscript not accepted
Short summary
Short summary
Coastal regions play a significant role in global processes. Numerical models are one of the major instruments in understanding ocean dynamics. The main objective of this article is to demonstrate the representativeness of the simulations with the new FESOM-C model by comparing the results with observational data for the southeastern part of the North Sea. An equally important objective is to present the application of convergence analysis of solutions for grids of different spatial resolutions.
N. Rakowsky, A. Androsov, A. Fuchs, S. Harig, A. Immerz, S. Danilov, W. Hiller, and J. Schröter
Nat. Hazards Earth Syst. Sci., 13, 1629–1642, https://doi.org/10.5194/nhess-13-1629-2013, https://doi.org/10.5194/nhess-13-1629-2013, 2013
Felipe de Luca Lopes de Amorim, Areti Balkoni, Vera Sidorenko, and Karen Helen Wiltshire
Ocean Sci., 20, 1247–1265, https://doi.org/10.5194/os-20-1247-2024, https://doi.org/10.5194/os-20-1247-2024, 2024
Short summary
Short summary
We studied the increasing or decreasing of chlorophyll a abundance in the German Bight. Chlorophyll a is the pigment present in algae that allows them to capture energy from the sun and indicates both the growth of the algae and the health of the environment. Most of the German Bight has decreasing chlorophyll a concentration in the analysed period. In addition, about 45 % of the changes happening in chlorophyll a were connected with changes in temperature.
Tridib Banerjee, Patrick Scholz, Sergey Danilov, Knut Klingbeil, and Dmitry Sidorenko
Geosci. Model Dev., 17, 7051–7065, https://doi.org/10.5194/gmd-17-7051-2024, https://doi.org/10.5194/gmd-17-7051-2024, 2024
Short summary
Short summary
In this paper we propose a new alternative to one of the functionalities of the sea ice model FESOM2. The alternative we propose allows the model to capture and simulate fast changes in quantities like sea surface elevation more accurately. We also demonstrate that the new alternative is faster and more adept at taking advantages of highly parallelized computing infrastructure. We therefore show that this new alternative is a great addition to the sea ice model FESOM2.
Ingeborg Bussmann, Eric P. Achterberg, Holger Brix, Nicolas Brüggemann, Götz Flöser, Claudia Schütze, and Philipp Fischer
Biogeosciences, 21, 3819–3838, https://doi.org/10.5194/bg-21-3819-2024, https://doi.org/10.5194/bg-21-3819-2024, 2024
Short summary
Short summary
Methane (CH4) is an important greenhouse gas and contributes to climate warming. However, the input of CH4 from coastal areas to the atmosphere is not well defined. Dissolved and atmospheric CH4 was determined at high spatial resolution in or above the North Sea. The atmospheric CH4 concentration was mainly influenced by wind direction. With our detailed study on the spatial distribution of CH4 fluxes we were able to provide a detailed and more realistic estimation of coastal CH4 fluxes.
Kacper Nowak, Sergey Danilov, Vasco Müller, and Caili Liu
EGUsphere, https://doi.org/10.5194/egusphere-2024-1119, https://doi.org/10.5194/egusphere-2024-1119, 2024
Short summary
Short summary
A new method called coarse-graining scale analysis is gaining traction as an alternative to Fourier analysis. However, it requires data to be on a regular grid. To address this, we present a high-performance Python package of coarse-graining technique using discrete Laplacians. This method can handle any mesh type and is ideal for processing output directly from unstructured-mesh models. Computation is split into preparation and solving phases, with GPU acceleration ensuring fast processing.
Swantje Bastin, Aleksei Koldunov, Florian Schütte, Oliver Gutjahr, Marta Agnieszka Mrozowska, Tim Fischer, Radomyra Shevchenko, Arjun Kumar, Nikolay Koldunov, Helmuth Haak, Nils Brüggemann, Rebecca Hummels, Mia Sophie Specht, Johann Jungclaus, Sergey Danilov, Marcus Dengler, and Markus Jochum
EGUsphere, https://doi.org/10.5194/egusphere-2024-2281, https://doi.org/10.5194/egusphere-2024-2281, 2024
Short summary
Short summary
Vertical mixing is an important process e.g. for tropical sea surface temperature, but cannot be resolved by ocean models. Comparisons of mixing schemes and settings have usually been done with a single model, sometimes yielding conflicting results. We systematically compare two widely used schemes, TKE and KPP, with different parameter settings, in two different ocean models, and show that most effects from mixing scheme parameter changes are model dependent.
Ivan Kuznetsov, Benjamin Rabe, Alexey Androsov, Ying-Chih Fang, Mario Hoppmann, Alejandra Quintanilla-Zurita, Sven Harig, Sandra Tippenhauer, Kirstin Schulz, Volker Mohrholz, Ilker Fer, Vera Fofonova, and Markus Janout
Ocean Sci., 20, 759–777, https://doi.org/10.5194/os-20-759-2024, https://doi.org/10.5194/os-20-759-2024, 2024
Short summary
Short summary
Our research introduces a tool for dynamically mapping the Arctic Ocean using data from the MOSAiC experiment. Incorporating extensive data into a model clarifies the ocean's structure and movement. Our findings on temperature, salinity, and currents reveal how water layers mix and identify areas of intense water movement. This enhances understanding of Arctic Ocean dynamics and supports climate impact studies. Our work is vital for comprehending this key region in global climate science.
Alexey Androsov, Sven Harig, Natalia Zamora, Kim Knauer, and Natalja Rakowsky
Nat. Hazards Earth Syst. Sci., 24, 1635–1656, https://doi.org/10.5194/nhess-24-1635-2024, https://doi.org/10.5194/nhess-24-1635-2024, 2024
Short summary
Short summary
Two numerical codes are used in a comparative analysis of the calculation of the tsunami wave due to an earthquake along the Peruvian coast. The comparison primarily evaluates the flow velocity fields in flooded areas. The relative importance of the various parts of the equations is determined, focusing on the nonlinear terms. The influence of the nonlinearity on the degree and volume of flooding, flow velocity, and small-scale fluctuations is determined.
Itzel Ruvalcaba Baroni, Elin Almroth-Rosell, Lars Axell, Sam T. Fredriksson, Jenny Hieronymus, Magnus Hieronymus, Sandra-Esther Brunnabend, Matthias Gröger, Ivan Kuznetsov, Filippa Fransner, Robinson Hordoir, Saeed Falahat, and Lars Arneborg
Biogeosciences, 21, 2087–2132, https://doi.org/10.5194/bg-21-2087-2024, https://doi.org/10.5194/bg-21-2087-2024, 2024
Short summary
Short summary
The health of the Baltic and North seas is threatened due to high anthropogenic pressure; thus, different methods to assess the status of these regions are urgently needed. Here, we validated a novel model simulating the ocean dynamics and biogeochemistry of the Baltic and North seas that can be used to create future climate and nutrient scenarios, contribute to European initiatives on de-eutrophication, and provide water quality advice and support on nutrient load reductions for both seas.
Christian Geiß, Jana Maier, Emily So, Elisabeth Schoepfer, Sven Harig, Juan Camilo Gómez Zapata, and Yue Zhu
Nat. Hazards Earth Syst. Sci., 24, 1051–1064, https://doi.org/10.5194/nhess-24-1051-2024, https://doi.org/10.5194/nhess-24-1051-2024, 2024
Short summary
Short summary
We establish a model of future geospatial population distributions to quantify the number of people living in earthquake-prone and tsunami-prone areas of Lima and Callao, Peru, for the year 2035. Areas of high earthquake intensity will experience a population growth of almost 30 %. The population in the tsunami inundation area is estimated to grow by more than 60 %. Uncovering those relations can help urban planners and policymakers to develop effective risk mitigation strategies.
Sergey Danilov, Carolin Mehlmann, Dmitry Sidorenko, and Qiang Wang
Geosci. Model Dev., 17, 2287–2297, https://doi.org/10.5194/gmd-17-2287-2024, https://doi.org/10.5194/gmd-17-2287-2024, 2024
Short summary
Short summary
Sea ice models are a necessary component of climate models. At very high resolution they are capable of simulating linear kinematic features, such as leads, which are important for better prediction of heat exchanges between the ocean and atmosphere. Two new discretizations are described which improve the sea ice component of the Finite volumE Sea ice–Ocean Model (FESOM version 2) by allowing simulations of finer scales.
Céline Heuzé, Oliver Huhn, Maren Walter, Natalia Sukhikh, Salar Karam, Wiebke Körtke, Myriel Vredenborg, Klaus Bulsiewicz, Jürgen Sültenfuß, Ying-Chih Fang, Christian Mertens, Benjamin Rabe, Sandra Tippenhauer, Jacob Allerholt, Hailun He, David Kuhlmey, Ivan Kuznetsov, and Maria Mallet
Earth Syst. Sci. Data, 15, 5517–5534, https://doi.org/10.5194/essd-15-5517-2023, https://doi.org/10.5194/essd-15-5517-2023, 2023
Short summary
Short summary
Gases dissolved in the ocean water not used by the ecosystem (or "passive tracers") are invaluable to track water over long distances and investigate the processes that modify its properties. Unfortunately, especially so in the ice-covered Arctic Ocean, such gas measurements are sparse. We here present a data set of several passive tracers (anthropogenic gases, noble gases and their isotopes) collected over the full ocean depth, weekly, during the 1-year drift in the Arctic during MOSAiC.
Elisabeth Schoepfer, Jörn Lauterjung, Torsten Riedlinger, Harald Spahn, Juan Camilo Gómez Zapata, Christian D. León, Hugo Rosero-Velásquez, Sven Harig, Michael Langbein, Nils Brinckmann, Günter Strunz, Christian Geiß, and Hannes Taubenböck
Nat. Hazards Earth Syst. Sci. Discuss., https://doi.org/10.5194/nhess-2023-142, https://doi.org/10.5194/nhess-2023-142, 2023
Revised manuscript accepted for NHESS
Short summary
Short summary
In this paper, we provide a brief introduction on the paradigm shift from managing disasters to managing risks, followed by single-hazard to multi-hazard risk assessment. We highlight four global strategies that address disaster risk reduction and call for action. Subsequently, we present a conceptual approach for multi-risk assessment which was designed to serve potential users like disaster risk managers, urban planners or operators of critical infrastructures to increase their capabilities.
Johannes J. Rick, Mirco Scharfe, Tatyana Romanova, Justus E. E. van Beusekom, Ragnhild Asmus, Harald Asmus, Finn Mielck, Anja Kamp, Rainer Sieger, and Karen H. Wiltshire
Earth Syst. Sci. Data, 15, 1037–1057, https://doi.org/10.5194/essd-15-1037-2023, https://doi.org/10.5194/essd-15-1037-2023, 2023
Short summary
Short summary
The Sylt Roads (Wadden Sea) time series is illustrated. Since 1984, the water temperature has risen by 1.1 °C, while pH and salinity decreased by 0.2 and 0.3 units. Nutrients (P, N) displayed a period of high eutrophication until 1998 and have decreased since 1999, while Si showed a parallel increase. Chlorophyll did not mirror these changes, probably due to a switch in nutrient limitation. Until 1998, algae were primarily limited by Si, and since 1999, P limitation has become more important.
Mario Hoppmann, Ivan Kuznetsov, Ying-Chih Fang, and Benjamin Rabe
Earth Syst. Sci. Data, 14, 4901–4921, https://doi.org/10.5194/essd-14-4901-2022, https://doi.org/10.5194/essd-14-4901-2022, 2022
Short summary
Short summary
The role of eddies and fronts in the oceans is a hot topic in climate research, but there are still many related knowledge gaps, particularly in the ice-covered Arctic Ocean. Here we present a unique dataset of ocean observations collected by a set of drifting buoys installed on ice floes as part of the 2019/2020 MOSAiC campaign. The buoys recorded temperature and salinity data for 10 months, providing extraordinary insights into the properties and processes of the ocean along their drift.
Jan Streffing, Dmitry Sidorenko, Tido Semmler, Lorenzo Zampieri, Patrick Scholz, Miguel Andrés-Martínez, Nikolay Koldunov, Thomas Rackow, Joakim Kjellsson, Helge Goessling, Marylou Athanase, Qiang Wang, Jan Hegewald, Dmitry V. Sein, Longjiang Mu, Uwe Fladrich, Dirk Barbi, Paul Gierz, Sergey Danilov, Stephan Juricke, Gerrit Lohmann, and Thomas Jung
Geosci. Model Dev., 15, 6399–6427, https://doi.org/10.5194/gmd-15-6399-2022, https://doi.org/10.5194/gmd-15-6399-2022, 2022
Short summary
Short summary
We developed a new atmosphere–ocean coupled climate model, AWI-CM3. Our model is significantly more computationally efficient than its predecessors AWI-CM1 and AWI-CM2. We show that the model, although cheaper to run, provides results of similar quality when modeling the historic period from 1850 to 2014. We identify the remaining weaknesses to outline future work. Finally we preview an improved simulation where the reduction in computational cost has to be invested in higher model resolution.
Takaya Uchida, Julien Le Sommer, Charles Stern, Ryan P. Abernathey, Chris Holdgraf, Aurélie Albert, Laurent Brodeau, Eric P. Chassignet, Xiaobiao Xu, Jonathan Gula, Guillaume Roullet, Nikolay Koldunov, Sergey Danilov, Qiang Wang, Dimitris Menemenlis, Clément Bricaud, Brian K. Arbic, Jay F. Shriver, Fangli Qiao, Bin Xiao, Arne Biastoch, René Schubert, Baylor Fox-Kemper, William K. Dewar, and Alan Wallcraft
Geosci. Model Dev., 15, 5829–5856, https://doi.org/10.5194/gmd-15-5829-2022, https://doi.org/10.5194/gmd-15-5829-2022, 2022
Short summary
Short summary
Ocean and climate scientists have used numerical simulations as a tool to examine the ocean and climate system since the 1970s. Since then, owing to the continuous increase in computational power and advances in numerical methods, we have been able to simulate increasing complex phenomena. However, the fidelity of the simulations in representing the phenomena remains a core issue in the ocean science community. Here we propose a cloud-based framework to inter-compare and assess such simulations.
Patrick Scholz, Dmitry Sidorenko, Sergey Danilov, Qiang Wang, Nikolay Koldunov, Dmitry Sein, and Thomas Jung
Geosci. Model Dev., 15, 335–363, https://doi.org/10.5194/gmd-15-335-2022, https://doi.org/10.5194/gmd-15-335-2022, 2022
Short summary
Short summary
Structured-mesh ocean models are still the most mature in terms of functionality due to their long development history. However, unstructured-mesh ocean models have acquired new features and caught up in their functionality. This paper continues the work by Scholz et al. (2019) of documenting the features available in FESOM2.0. It focuses on the following two aspects: (i) partial bottom cells and embedded sea ice and (ii) dealing with mixing parameterisations enabled by using the CVMix package.
Juan Camilo Gomez-Zapata, Nils Brinckmann, Sven Harig, Raquel Zafrir, Massimiliano Pittore, Fabrice Cotton, and Andrey Babeyko
Nat. Hazards Earth Syst. Sci., 21, 3599–3628, https://doi.org/10.5194/nhess-21-3599-2021, https://doi.org/10.5194/nhess-21-3599-2021, 2021
Short summary
Short summary
We present variable-resolution boundaries based on central Voronoi tessellations (CVTs) to spatially aggregate building exposure models and physical vulnerability assessment. Their geo-cell sizes are inversely proportional to underlying distributions that account for the combination between hazard intensities and exposure proxies. We explore their efficiency and associated uncertainties in risk–loss estimations and mapping from decoupled scenario-based earthquakes and tsunamis in Lima, Peru.
Vera Fofonova, Tuomas Kärnä, Knut Klingbeil, Alexey Androsov, Ivan Kuznetsov, Dmitry Sidorenko, Sergey Danilov, Hans Burchard, and Karen Helen Wiltshire
Geosci. Model Dev., 14, 6945–6975, https://doi.org/10.5194/gmd-14-6945-2021, https://doi.org/10.5194/gmd-14-6945-2021, 2021
Short summary
Short summary
We present a test case of river plume spreading to evaluate coastal ocean models. Our test case reveals the level of numerical mixing (due to parameterizations used and numerical treatment of processes in the model) and the ability of models to reproduce complex dynamics. The major result of our comparative study is that accuracy in reproducing the analytical solution depends less on the type of applied model architecture or numerical grid than it does on the type of advection scheme.
Qiang Wang, Sergey Danilov, Longjiang Mu, Dmitry Sidorenko, and Claudia Wekerle
The Cryosphere, 15, 4703–4725, https://doi.org/10.5194/tc-15-4703-2021, https://doi.org/10.5194/tc-15-4703-2021, 2021
Short summary
Short summary
Using simulations, we found that changes in ocean freshwater content induced by wind perturbations can significantly affect the Arctic sea ice drift, thickness, concentration and deformation rates years after the wind perturbations. The impact is through changes in sea surface height and surface geostrophic currents and the most pronounced in warm seasons. Such a lasting impact might become stronger in a warming climate and implies the importance of ocean initialization in sea ice prediction.
Davide Zanchettin, Sara Bruni, Fabio Raicich, Piero Lionello, Fanny Adloff, Alexey Androsov, Fabrizio Antonioli, Vincenzo Artale, Eugenio Carminati, Christian Ferrarin, Vera Fofonova, Robert J. Nicholls, Sara Rubinetti, Angelo Rubino, Gianmaria Sannino, Giorgio Spada, Rémi Thiéblemont, Michael Tsimplis, Georg Umgiesser, Stefano Vignudelli, Guy Wöppelmann, and Susanna Zerbini
Nat. Hazards Earth Syst. Sci., 21, 2643–2678, https://doi.org/10.5194/nhess-21-2643-2021, https://doi.org/10.5194/nhess-21-2643-2021, 2021
Short summary
Short summary
Relative sea level in Venice rose by about 2.5 mm/year in the past 150 years due to the combined effect of subsidence and mean sea-level rise. We estimate the likely range of mean sea-level rise in Venice by 2100 due to climate changes to be between about 10 and 110 cm, with an improbable yet possible high-end scenario of about 170 cm. Projections of subsidence are not available, but historical evidence demonstrates that they can increase the hazard posed by climatically induced sea-level rise.
Claudia Wekerle, Tore Hattermann, Qiang Wang, Laura Crews, Wilken-Jon von Appen, and Sergey Danilov
Ocean Sci., 16, 1225–1246, https://doi.org/10.5194/os-16-1225-2020, https://doi.org/10.5194/os-16-1225-2020, 2020
Short summary
Short summary
The high-resolution ocean models ROMS and FESOM configured for the Fram Strait reveal very energetic ocean conditions there. The two main currents meander strongly and shed circular currents of water, called eddies. Our analysis shows that this region is characterised by small and short-lived eddies (on average around a 5 km radius and 10 d lifetime). Both models agree on eddy properties and show similar patterns of baroclinic and barotropic instability of the West Spitsbergen Current.
Onur Kerimoglu, Yoana G. Voynova, Fatemeh Chegini, Holger Brix, Ulrich Callies, Richard Hofmeister, Knut Klingbeil, Corinna Schrum, and Justus E. E. van Beusekom
Biogeosciences, 17, 5097–5127, https://doi.org/10.5194/bg-17-5097-2020, https://doi.org/10.5194/bg-17-5097-2020, 2020
Short summary
Short summary
In this study, using extensive field observations and a numerical model, we analyzed the physical and biogeochemical structure of a coastal system following an extreme flood event. Our results suggest that a number of anomalous observations were driven by a co-occurrence of peculiar meteorological conditions and increased riverine discharges. Our results call for attention to the combined effects of hydrological and meteorological extremes that are anticipated to increase in frequency.
Hiroyuki Tsujino, L. Shogo Urakawa, Stephen M. Griffies, Gokhan Danabasoglu, Alistair J. Adcroft, Arthur E. Amaral, Thomas Arsouze, Mats Bentsen, Raffaele Bernardello, Claus W. Böning, Alexandra Bozec, Eric P. Chassignet, Sergey Danilov, Raphael Dussin, Eleftheria Exarchou, Pier Giuseppe Fogli, Baylor Fox-Kemper, Chuncheng Guo, Mehmet Ilicak, Doroteaciro Iovino, Who M. Kim, Nikolay Koldunov, Vladimir Lapin, Yiwen Li, Pengfei Lin, Keith Lindsay, Hailong Liu, Matthew C. Long, Yoshiki Komuro, Simon J. Marsland, Simona Masina, Aleksi Nummelin, Jan Klaus Rieck, Yohan Ruprich-Robert, Markus Scheinert, Valentina Sicardi, Dmitry Sidorenko, Tatsuo Suzuki, Hiroaki Tatebe, Qiang Wang, Stephen G. Yeager, and Zipeng Yu
Geosci. Model Dev., 13, 3643–3708, https://doi.org/10.5194/gmd-13-3643-2020, https://doi.org/10.5194/gmd-13-3643-2020, 2020
Short summary
Short summary
The OMIP-2 framework for global ocean–sea-ice model simulations is assessed by comparing multi-model means from 11 CMIP6-class global ocean–sea-ice models calculated separately for the OMIP-1 and OMIP-2 simulations. Many features are very similar between OMIP-1 and OMIP-2 simulations, and yet key improvements in transitioning from OMIP-1 to OMIP-2 are also identified. Thus, the present assessment justifies that future ocean–sea-ice model development and analysis studies use the OMIP-2 framework.
Dmitry Sidorenko, Sergey Danilov, Nikolay Koldunov, Patrick Scholz, and Qiang Wang
Geosci. Model Dev., 13, 3337–3345, https://doi.org/10.5194/gmd-13-3337-2020, https://doi.org/10.5194/gmd-13-3337-2020, 2020
Short summary
Short summary
Computation of barotropic and meridional overturning streamfunctions for models formulated on unstructured meshes is commonly preceded by interpolation to a regular mesh. This operation destroys the original conservation, which can be then be artificially imposed to make the computation possible. An elementary method is proposed that avoids interpolation and preserves conservation in a strict model sense.
Vera Fofonova, Alexey Androsov, Lasse Sander, Ivan Kuznetsov, Felipe Amorim, H. Christian Hass, and Karen H. Wiltshire
Ocean Sci., 15, 1761–1782, https://doi.org/10.5194/os-15-1761-2019, https://doi.org/10.5194/os-15-1761-2019, 2019
Short summary
Short summary
This study is dedicated to tidally induced dynamics in the Sylt-Rømø Bight with a focus on the non-linear component. The tidal residual circulation and asymmetric tidal cycles largely define the circulation pattern, transport and accumulation of sediment, and the distribution of bedforms. The newly obtained high-quality bathymetric data supported the use of high-resolution grids (up to 2 m in the intertidal zone) and elaboration of the details of tidal energy transformation in the domain.
Patrick Scholz, Dmitry Sidorenko, Ozgur Gurses, Sergey Danilov, Nikolay Koldunov, Qiang Wang, Dmitry Sein, Margarita Smolentseva, Natalja Rakowsky, and Thomas Jung
Geosci. Model Dev., 12, 4875–4899, https://doi.org/10.5194/gmd-12-4875-2019, https://doi.org/10.5194/gmd-12-4875-2019, 2019
Short summary
Short summary
This paper is the first in a series documenting and assessing important key components of the Finite-volumE Sea ice-Ocean Model version 2.0 (FESOM2.0). We assess the hydrographic biases, large-scale circulation, numerical performance and scalability of FESOM2.0 compared with its predecessor, FESOM1.4. The main conclusion is that the results of FESOM2.0 compare well to FESOM1.4 in terms of model biases but with a remarkable performance speedup with a 3 times higher throughput.
Ivan Kuznetsov, Alexey Androsov, Vera Fofonova, Sergey Danilov, Natalja Rakowsky, Sven Harig, and Karen Helen Wiltshire
Ocean Sci. Discuss., https://doi.org/10.5194/os-2019-103, https://doi.org/10.5194/os-2019-103, 2019
Revised manuscript not accepted
Short summary
Short summary
Coastal regions play a significant role in global processes. Numerical models are one of the major instruments in understanding ocean dynamics. The main objective of this article is to demonstrate the representativeness of the simulations with the new FESOM-C model by comparing the results with observational data for the southeastern part of the North Sea. An equally important objective is to present the application of convergence analysis of solutions for grids of different spatial resolutions.
Nikolay V. Koldunov, Vadym Aizinger, Natalja Rakowsky, Patrick Scholz, Dmitry Sidorenko, Sergey Danilov, and Thomas Jung
Geosci. Model Dev., 12, 3991–4012, https://doi.org/10.5194/gmd-12-3991-2019, https://doi.org/10.5194/gmd-12-3991-2019, 2019
Short summary
Short summary
We measure how computational performance of the global FESOM2 ocean model (formulated on an unstructured mesh) changes with the increase in the number of computational cores. We find that for many components of the model the performance increases linearly but we also identify two bottlenecks: sea ice and ssh submodules. We show that FESOM2 is on par with the state-of-the-art ocean models in terms of throughput that reach 16 simulated years per day for eddy resolving configuration (1/10°).
Thomas Rackow, Dmitry V. Sein, Tido Semmler, Sergey Danilov, Nikolay V. Koldunov, Dmitry Sidorenko, Qiang Wang, and Thomas Jung
Geosci. Model Dev., 12, 2635–2656, https://doi.org/10.5194/gmd-12-2635-2019, https://doi.org/10.5194/gmd-12-2635-2019, 2019
Short summary
Short summary
Current climate models show errors in the deep ocean that are larger than the level of natural variability and the response to enhanced greenhouse gas concentrations. These errors are larger than the signals we aim to predict. With the AWI Climate Model, we show that increasing resolution to resolve eddies can lead to major reductions in deep ocean errors. AWI's next-generation (CMIP6) model configuration will thus use locally eddy-resolving computational grids for projecting climate change.
Qiang Wang, Claudia Wekerle, Sergey Danilov, Xuezhu Wang, and Thomas Jung
Geosci. Model Dev., 11, 1229–1255, https://doi.org/10.5194/gmd-11-1229-2018, https://doi.org/10.5194/gmd-11-1229-2018, 2018
Short summary
Short summary
For developing a system for Arctic research, we evaluate the Arctic Ocean simulated by FESOM. We use two global meshes differing in the horizontal resolution only in the Arctic Ocean (24 vs. 4.5 km). The high resolution significantly improves the model's representation of the Arctic Ocean. The most pronounced improvement is in the Arctic intermediate layer. The high resolution also improves the ocean surface circulation, mainly through a better representation of the Canadian Arctic Archipelago.
Burkard Baschek, Friedhelm Schroeder, Holger Brix, Rolf Riethmüller, Thomas H. Badewien, Gisbert Breitbach, Bernd Brügge, Franciscus Colijn, Roland Doerffer, Christiane Eschenbach, Jana Friedrich, Philipp Fischer, Stefan Garthe, Jochen Horstmann, Hajo Krasemann, Katja Metfies, Lucas Merckelbach, Nino Ohle, Wilhelm Petersen, Daniel Pröfrock, Rüdiger Röttgers, Michael Schlüter, Jan Schulz, Johannes Schulz-Stellenfleth, Emil Stanev, Joanna Staneva, Christian Winter, Kai Wirtz, Jochen Wollschläger, Oliver Zielinski, and Friedwart Ziemer
Ocean Sci., 13, 379–410, https://doi.org/10.5194/os-13-379-2017, https://doi.org/10.5194/os-13-379-2017, 2017
Short summary
Short summary
The Coastal Observing System for Northern and Arctic Seas (COSYNA) was established in order to better understand the complex interdisciplinary processes of northern seas and the Arctic coasts in a changing environment. Particular focus is given to the heavily used German Bight in the North Sea. The automated observing and modelling system is designed to monitor real-time conditions, to provide short-term forecasts and data products, and to assess the impact of anthropogenically induced change.
Sergey Danilov, Dmitry Sidorenko, Qiang Wang, and Thomas Jung
Geosci. Model Dev., 10, 765–789, https://doi.org/10.5194/gmd-10-765-2017, https://doi.org/10.5194/gmd-10-765-2017, 2017
Short summary
Short summary
Numerical models of global ocean circulation are used to learn about future climate. The ocean circulation is characterized by processes on different spatial scales which are still beyond the reach of present computers. We describe a new model setup that allows one to vary a model's spatial resolution and hence focus the computational power on regional dynamics, reaching a better description of local processes in areas of interest.
Yoana G. Voynova, Holger Brix, Wilhelm Petersen, Sieglinde Weigelt-Krenz, and Mirco Scharfe
Biogeosciences, 14, 541–557, https://doi.org/10.5194/bg-14-541-2017, https://doi.org/10.5194/bg-14-541-2017, 2017
Short summary
Short summary
This study focuses on how the June 2013 Elbe River flood affected the southern German Bight. The largest summer flood within the last 140 years, it generated a substantial plume of nutrient-rich, buoyant waters from the Elbe estuary onto the coast. During the calm 2013 summer, the flood was followed by prolonged (2-month) water column stratification, chlorophyll blooms in surface, and uncharacteristically low oxygen in bottom waters. With climate change, these events are becoming more frequent.
Vera Fofonova, Igor Zhilyaev, Marina Krayneva, Dina Yakshina, Nikita Tananaev, Nina Volkova, and Karen H. Wiltshire
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2016-254, https://doi.org/10.5194/hess-2016-254, 2016
Manuscript not accepted for further review
Short summary
Short summary
This paper analyses water temperature characteristics in the basin outlet area of the Lena River during the summer season. The analysis is based on a long-term data series at several gauging stations including rare used data, however, which are important for understanding processes in the considered area. We discuss to what extent the water temperature observations near river bank represent the mean stream temperature. As an instrument statistical and deterministic modelling approaches are used.
S. Danilov, Q. Wang, R. Timmermann, N. Iakovlev, D. Sidorenko, M. Kimmritz, T. Jung, and J. Schröter
Geosci. Model Dev., 8, 1747–1761, https://doi.org/10.5194/gmd-8-1747-2015, https://doi.org/10.5194/gmd-8-1747-2015, 2015
Short summary
Short summary
Unstructured meshes allow multi-resolution modeling of ocean dynamics. Sea ice models formulated on unstructured meshes are a necessary component of ocean models intended for climate studies. This work presents a description of a finite-element sea ice model which is used as a component of a finite-element sea ice ocean circulation model. The principles underlying its design can be of interest to other groups pursuing ocean modelling on unstructured meshes.
Q. Wang, S. Danilov, D. Sidorenko, R. Timmermann, C. Wekerle, X. Wang, T. Jung, and J. Schröter
Geosci. Model Dev., 7, 663–693, https://doi.org/10.5194/gmd-7-663-2014, https://doi.org/10.5194/gmd-7-663-2014, 2014
N. Rakowsky, A. Androsov, A. Fuchs, S. Harig, A. Immerz, S. Danilov, W. Hiller, and J. Schröter
Nat. Hazards Earth Syst. Sci., 13, 1629–1642, https://doi.org/10.5194/nhess-13-1629-2013, https://doi.org/10.5194/nhess-13-1629-2013, 2013
Related subject area
Numerical methods
The Measurement Error Proxy System Model: MEPSM v0.2
Numerical stabilization methods for level-set-based ice front migration
Modelling chemical advection during magma ascent
Consistent point data assimilation in Firedrake and Icepack
A Joint Reconstruction and Model Selection Approach for Large Scale Inverse Modeling
A computationally efficient parameterization of aerosol, cloud and precipitation pH for application at global and regional scale (EQSAM4Clim-v12)
Assessing the benefits of approximately exact step sizes for Picard and Newton solver in simulating ice flow (FEniCS-full-Stokes v.1.3.2)
Assessing effects of climate and technology uncertainties in large natural resource allocation problems
VISIR-2: ship weather routing in Python
Incremental analysis update (IAU) in the Model for Prediction Across Scales coupled with the Joint Effort for Data assimilation Integration (MPAS–JEDI 2.0.0)
Decision-making strategies implemented in SolFinder 1.0 to identify eco-efficient aircraft trajectories: application study in AirTraf 3.0
Developing meshing workflows in Gmsh v4.11 for the geologic uncertainty assessment of high-temperature aquifer thermal energy storage
Development and preliminary validation of a land surface image assimilation system based on the Common Land Model
NorSand4AI: a comprehensive triaxial test simulation database for NorSand constitutive model materials
Explicit stochastic advection algorithms for the regional scale particle-resolved atmospheric aerosol model WRF-PartMC (v1.0)
ParticleDA.jl v.1.0: a distributed particle-filtering data assimilation package
HETerogeneous vectorized or Parallel (HETPv1.0): an updated inorganic heterogeneous chemistry solver for the metastable-state NH4+–Na+–Ca2+–K+–Mg2+–SO42−–NO3−–Cl−–H2O system based on ISORROPIA II
Three-dimensional geological modelling of igneous intrusions in LoopStructural v1.5.10
Estimating volcanic ash emissions using retrieved satellite ash columns and inverse ash transport modeling using VolcanicAshInversion v1.2.1, within the operational eEMEP (emergency European Monitoring and Evaluation Programme) volcanic plume forecasting system (version rv4_17)
Accounting for uncertainties in forecasting tropical-cyclone-induced compound flooding
An automatic mesh generator for coupled 1D–2D hydrodynamic models
Numerical coupling of aerosol emissions, dry removal, and turbulent mixing in the E3SM Atmosphere Model version 1 (EAMv1) – Part 1: Dust budget analyses and the impacts of a revised coupling scheme
Numerical coupling of aerosol emissions, dry removal, and turbulent mixing in the E3SM Atmosphere Model version 1 (EAMv1) – Part 2: A semi-discrete error analysis framework for assessing coupling schemes
jsmetrics v0.2.0: a Python package for metrics and algorithms used to identify or characterise atmospheric jet streams
The Paleochrono-1.1 probabilistic model to derive optimized and consistent chronologies for several paleoclimatic sites
P3D-BRNS v1.0.0: a three-dimensional, multiphase, multicomponent, pore-scale reactive transport modelling package for simulating biogeochemical processes in subsurface environments
MinVoellmy v1: a lightweight model for simulating rapid mass movements based on a modified Voellmy rheology
Scalable Feature Extraction and Tracking (SCAFET): a general framework for feature extraction from large climate data sets
Sweep interpolation: a cost-effective semi-Lagrangian scheme in the Global Environmental Multiscale model
CHONK 1.0: landscape evolution framework: cellular automata meets graph theory
Perspectives of physics-based machine learning strategies for geoscientific applications governed by partial differential equations
Calibration of absorbing boundary layers for geoacoustic wave modeling in pseudo-spectral time-domain methods
Assimilation of snow water equivalent from AMSR2 and IMS satellite data utilizing the local ensemble transform Kalman filter
GeoINR 1.0: an implicit neural network approach to three-dimensional geological modelling
A comparison of Eulerian and Lagrangian methods for vertical particle transport in the water column
AutoQS v1: automatic parametrization of QuickSampling based on training images analysis
Implementation and application of ensemble optimal interpolation on an operational chemistry weather model for improving PM2.5 and visibility predictions
A dynamical core based on a discontinuous Galerkin method for higher-order finite-element sea ice modeling
GStatSim V1.0: a Python package for geostatistical interpolation and conditional simulation
Leveraging Google's Tensor Processing Units for tsunami-risk mitigation planning in the Pacific Northwest and beyond
An improved subgrid channel model with upwind-form artificial diffusion for river hydrodynamics and floodplain inundation simulation
A model instability issue in the National Centers for Environmental Prediction Global Forecast System version 16 and potential solutions
A comparison of 3-D spherical shell thermal convection results at low to moderate Rayleigh number using ASPECT (version 2.2.0) and CitcomS (version 3.3.1)
LISFLOOD-FP 8.1: new GPU-accelerated solvers for faster fluvial/pluvial flood simulations
Fast approximate Barnes interpolation: illustrated by Python-Numba implementation fast-barnes-py v1.0
Strategies for conservative and non-conservative monotone remapping on the sphere
Modeling large‐scale landform evolution with a stream power law for glacial erosion (OpenLEM v37): benchmarking experiments against a more process-based description of ice flow (iSOSIA v3.4.3)
A mixed finite-element discretisation of the shallow-water equations
Multifidelity Monte Carlo estimation for efficient uncertainty quantification in climate-related modeling
Massively parallel modeling and inversion of electrical resistivity tomography data using PFLOTRAN
Matt J. Fischer
Geosci. Model Dev., 17, 6745–6760, https://doi.org/10.5194/gmd-17-6745-2024, https://doi.org/10.5194/gmd-17-6745-2024, 2024
Short summary
Short summary
In paleoclimate research, proxy system models (PSMs) model chemical or biological systems which receive environmental input and output (e.g., geochemical signals). The environmental inputs are rarely noiseless, which causes problems when calibrating multi-input PSMs. Here a PSM is developed which includes generalized noise in both model inputs and outputs and prior information. A quasi-Bayesian method enhances the stability of the solution of the Measurement Error Proxy System Model.
Gong Cheng, Mathieu Morlighem, and G. Hilmar Gudmundsson
Geosci. Model Dev., 17, 6227–6247, https://doi.org/10.5194/gmd-17-6227-2024, https://doi.org/10.5194/gmd-17-6227-2024, 2024
Short summary
Short summary
We conducted a comprehensive analysis of the stabilization and reinitialization techniques currently employed in ISSM and Úa for solving level-set equations, specifically those related to the dynamic representation of moving ice fronts within numerical ice sheet models. Our results demonstrate that the streamline upwind Petrov–Galerkin (SUPG) method outperforms the other approaches. We found that excessively frequent reinitialization can lead to exceptionally high errors in simulations.
Hugo Dominguez, Nicolas Riel, and Pierre Lanari
Geosci. Model Dev., 17, 6105–6122, https://doi.org/10.5194/gmd-17-6105-2024, https://doi.org/10.5194/gmd-17-6105-2024, 2024
Short summary
Short summary
Predicting the behaviour of magmatic systems is important for understanding Earth's matter and heat transport. Numerical modelling is a technique that can predict complex systems at different scales of space and time by solving equations using various techniques. This study tests four algorithms to find the best way to transport the melt composition. The "weighted essentially non-oscillatory" algorithm emerges as the best choice, minimising errors and preserving system mass well.
Reuben W. Nixon-Hill, Daniel Shapero, Colin J. Cotter, and David A. Ham
Geosci. Model Dev., 17, 5369–5386, https://doi.org/10.5194/gmd-17-5369-2024, https://doi.org/10.5194/gmd-17-5369-2024, 2024
Short summary
Short summary
Scientists often use models to study complex processes, like the movement of ice sheets, and compare them to measurements for estimating quantities that are hard to measure. We highlight an approach that ensures accurate results from point data sources (e.g. height measurements) by evaluating the numerical solution at true point locations. This method improves accuracy, aids communication between scientists, and is well-suited for integration with specialised software that automates processes.
Malena Sabaté Landman, Julianne Chung, Jiahua Jiang, Scot Miller, and Arvind Saibaba
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-90, https://doi.org/10.5194/gmd-2024-90, 2024
Revised manuscript accepted for GMD
Short summary
Short summary
Making an informed decision about what prior information to incorporate or discard in an inverse model is important yet very challenging, as it is often not straightforward to distinguish between informative and non-informative variables. In this study, we develop a new approach for incorporating prior information in an inverse model using predictor variables, while simultaneously selecting the relevant predictor variables for the estimation of the unknown quantity of interest.
Swen Metzger, Samuel Rémy, Jason E. Williams, Vincent Huijnen, and Johannes Flemming
Geosci. Model Dev., 17, 5009–5021, https://doi.org/10.5194/gmd-17-5009-2024, https://doi.org/10.5194/gmd-17-5009-2024, 2024
Short summary
Short summary
EQSAM4Clim has recently been revised to provide an accurate and efficient method for calculating the acidity of atmospheric particles. It is based on an analytical concept that is sufficiently fast and free of numerical noise, which makes it attractive for air quality forecasting. Version 12 allows the calculation of aerosol composition based on the gas–liquid–solid and the reduced gas–liquid partitioning with the associated water uptake for both cases, including the acidity of the aerosols.
Niko Schmidt, Angelika Humbert, and Thomas Slawig
Geosci. Model Dev., 17, 4943–4959, https://doi.org/10.5194/gmd-17-4943-2024, https://doi.org/10.5194/gmd-17-4943-2024, 2024
Short summary
Short summary
Future sea-level rise is of big significance for coastal regions. The melting and acceleration of glaciers plays a major role in sea-level change. Computer simulation of glaciers costs a lot of computational resources. In this publication, we test a new way of simulating glaciers. This approach produces the same results but has the advantage that it needs much less computation time. As simulations can be obtained with fewer computation resources, higher resolution and physics become affordable.
Jevgenijs Steinbuks, Yongyang Cai, Jonas Jaegermeyr, and Thomas W. Hertel
Geosci. Model Dev., 17, 4791–4819, https://doi.org/10.5194/gmd-17-4791-2024, https://doi.org/10.5194/gmd-17-4791-2024, 2024
Short summary
Short summary
This paper applies a cutting-edge numerical method, SCEQ, to show how uncertain climate change and technological progress affect the future utilization of the world's scarce land resources. The paper's key insight is to illustrate how much global cropland will expand when future crop yields are unknown. The study finds the range of outcomes for land use change to be smaller when using this novel method compared to existing deterministic models.
Gianandrea Mannarini, Mario Leonardo Salinas, Lorenzo Carelli, Nicola Petacco, and Josip Orović
Geosci. Model Dev., 17, 4355–4382, https://doi.org/10.5194/gmd-17-4355-2024, https://doi.org/10.5194/gmd-17-4355-2024, 2024
Short summary
Short summary
Ship weather routing has the potential to reduce CO2 emissions, but it currently lacks open and verifiable research. The Python-refactored VISIR-2 model considers currents, waves, and wind to optimise routes. The model was validated, and its computational performance is quasi-linear. For a ferry sailing in the Mediterranean Sea, VISIR-2 yields the largest percentage emission savings for upwind navigation. Given the vessel performance curve, the model is generalisable across various vessel types.
Soyoung Ha, Jonathan J. Guerrette, Ivette Hernández Baños, William C. Skamarock, and Michael G. Duda
Geosci. Model Dev., 17, 4199–4211, https://doi.org/10.5194/gmd-17-4199-2024, https://doi.org/10.5194/gmd-17-4199-2024, 2024
Short summary
Short summary
To mitigate the imbalances in the initial conditions, this study introduces our recent implementation of the incremental analysis update (IAU) in the Model for Prediction Across Scales – Atmospheric (MPAS-A) component coupled with the Joint Effort for Data assimilation Integration (JEDI) through the cycling system. A month-long cycling run demonstrates the successful implementation of the IAU capability in the MPAS–JEDI cycling system.
Federica Castino, Feijia Yin, Volker Grewe, Hiroshi Yamashita, Sigrun Matthes, Simone Dietmüller, Sabine Baumann, Manuel Soler, Abolfazl Simorgh, Maximilian Mendiguchia Meuser, Florian Linke, and Benjamin Lührs
Geosci. Model Dev., 17, 4031–4052, https://doi.org/10.5194/gmd-17-4031-2024, https://doi.org/10.5194/gmd-17-4031-2024, 2024
Short summary
Short summary
We introduce SolFinder 1.0, a decision-making tool to select trade-offs between different objective functions for optimal aircraft trajectories, including fuel use, flight time, NOx emissions, contrail distance, and climate impact. The module is included in the AirTraf 3.0 submodel and uses weather conditions simulated by the EMAC atmospheric model. This paper focuses on the ability of SolFinder to identify eco-efficient trajectories, reducing a flight's climate impact at limited cost penalties.
Ali Dashti, Jens C. Grimmer, Christophe Geuzaine, Florian Bauer, and Thomas Kohl
Geosci. Model Dev., 17, 3467–3485, https://doi.org/10.5194/gmd-17-3467-2024, https://doi.org/10.5194/gmd-17-3467-2024, 2024
Short summary
Short summary
This study developed new meshing workflows to enable the automatic generation of meshes that follow geological models. The workflow allows for importing several geological models as input for Gmsh and later exporting the same number of high-quality meshes. This way, geological uncertainty is directly included in the numerical simulations. This study evaluates the impact of the geological uncertainty on thermohydraulic performance of two reservoirs for high-temperature heat storage applications.
Wangbin Shen, Zhaohui Lin, Zhengkun Qin, and Juan Li
Geosci. Model Dev., 17, 3447–3465, https://doi.org/10.5194/gmd-17-3447-2024, https://doi.org/10.5194/gmd-17-3447-2024, 2024
Short summary
Short summary
In this study, a land surface image assimilation system capable of optimizing the spatial structure of the background field is constructed by introducing the curvelet analysis method and taking the similarity of image structure as a weak constraint. The findings demonstrate that the assimilation of surface soil moisture observation images effectively and reasonably enhances the spatial structure of soil moisture analysis field.
Luan Carlos de Sena Monteiro Ozelim, Michéle Dal Toé Casagrande, and André Luís Brasil Cavalcante
Geosci. Model Dev., 17, 3175–3197, https://doi.org/10.5194/gmd-17-3175-2024, https://doi.org/10.5194/gmd-17-3175-2024, 2024
Short summary
Short summary
The paper addresses synthetic dataset challenges in nonlinear constitutive modeling of soils, providing two datasets: one with 2000 soil types, 40 test conditions each (160 000 triaxial tests), and a second with 2048 soil types, 42 test conditions each (172 032 triaxial tests). Each dataset is a 4000×10 matrix applicable for multivariate forecasting and geotechnical simulations. In addition, a new Python code is introduced, empowering researchers to leverage Python packages for NorSand analyses.
Jeffrey Henry Curtis, Nicole Riemer, and Matthew West
EGUsphere, https://doi.org/10.5194/egusphere-2024-825, https://doi.org/10.5194/egusphere-2024-825, 2024
Short summary
Short summary
This paper introduces a numerical method for simulating particle-based aerosol transport in atmospheric models. We detail the various advection order method’s numerical properties and demonstrate its implementation in a 3D weather prediction model (WRF) for the first time. Particle-based techniques improve the accuracy of aerosol size and composition predictions, which are key for aerosol-cloud and aerosol-radiation interactions.
Daniel Giles, Matthew M. Graham, Mosè Giordano, Tuomas Koskela, Alexandros Beskos, and Serge Guillas
Geosci. Model Dev., 17, 2427–2445, https://doi.org/10.5194/gmd-17-2427-2024, https://doi.org/10.5194/gmd-17-2427-2024, 2024
Short summary
Short summary
Digital twins of physical and human systems informed by real-time data are becoming ubiquitous across a wide range of settings. Progress for researchers is currently limited by a lack of tools to run these models effectively and efficiently. A key challenge is the optimal use of high-performance computing environments. The work presented here focuses on a developed open-source software platform which aims to improve this usage, with an emphasis placed on flexibility, efficiency, and scalability.
Stefan J. Miller, Paul A. Makar, and Colin J. Lee
Geosci. Model Dev., 17, 2197–2219, https://doi.org/10.5194/gmd-17-2197-2024, https://doi.org/10.5194/gmd-17-2197-2024, 2024
Short summary
Short summary
This work outlines a new solver written in Fortran to calculate the partitioning of metastable aerosols at thermodynamic equilibrium based on the forward algorithms of ISORROPIA II. The new code includes numerical improvements that decrease the computational speed (compared to ISORROPIA II) while improving the accuracy of the partitioning solution.
Fernanda Alvarado-Neves, Laurent Ailleres, Lachlan Grose, Alexander R. Cruden, and Robin Armit
Geosci. Model Dev., 17, 1975–1993, https://doi.org/10.5194/gmd-17-1975-2024, https://doi.org/10.5194/gmd-17-1975-2024, 2024
Short summary
Short summary
Previous work has demonstrated that adding geological knowledge to modelling methods creates more accurate and reliable models. Following this reasoning, we added constraints from magma emplacement mechanisms into existing modelling frameworks to improve the 3D characterisation of igneous intrusions. We tested the method on synthetic and real-world case studies, and the results show that our method can reproduce intrusion morphologies with no manual processing and using realistic datasets.
André R. Brodtkorb, Anna Benedictow, Heiko Klein, Arve Kylling, Agnes Nyiri, Alvaro Valdebenito, Espen Sollum, and Nina Kristiansen
Geosci. Model Dev., 17, 1957–1974, https://doi.org/10.5194/gmd-17-1957-2024, https://doi.org/10.5194/gmd-17-1957-2024, 2024
Short summary
Short summary
It is vital to know the extent and concentration of volcanic ash in the atmosphere during a volcanic eruption. Whilst satellite imagery may give an estimate of the ash right now (assuming no cloud coverage), we also need to know where it will be in the coming hours. This paper presents a method for estimating parameters for a volcanic eruption based on satellite observations of ash in the atmosphere. The software package is open source and applicable to similar inversion scenarios.
Kees Nederhoff, Maarten van Ormondt, Jay Veeramony, Ap van Dongeren, José Antonio Álvarez Antolínez, Tim Leijnse, and Dano Roelvink
Geosci. Model Dev., 17, 1789–1811, https://doi.org/10.5194/gmd-17-1789-2024, https://doi.org/10.5194/gmd-17-1789-2024, 2024
Short summary
Short summary
Forecasting tropical cyclones and their flooding impact is challenging. Our research introduces the Tropical Cyclone Forecasting Framework (TC-FF), enhancing cyclone predictions despite uncertainties. TC-FF generates global wind and flood scenarios, valuable even in data-limited regions. Applied to cases like Cyclone Idai, it showcases potential in bettering disaster preparation, marking progress in handling cyclone threats.
Younghun Kang and Ethan J. Kubatko
Geosci. Model Dev., 17, 1603–1625, https://doi.org/10.5194/gmd-17-1603-2024, https://doi.org/10.5194/gmd-17-1603-2024, 2024
Short summary
Short summary
Models used to simulate the flow of coastal and riverine waters, including flooding, require a geometric representation (or mesh) of geographic features that exhibit a range of disparate spatial scales from large, open waters to small, narrow channels. Representing these features in an accurate way without excessive computational overhead presents a challenge. Here, we develop an automatic mesh generation tool to help address this challenge. Our results demonstrate the efficacy of our approach.
Hui Wan, Kai Zhang, Christopher J. Vogl, Carol S. Woodward, Richard C. Easter, Philip J. Rasch, Yan Feng, and Hailong Wang
Geosci. Model Dev., 17, 1387–1407, https://doi.org/10.5194/gmd-17-1387-2024, https://doi.org/10.5194/gmd-17-1387-2024, 2024
Short summary
Short summary
Sophisticated numerical models of the Earth's atmosphere include representations of many physical and chemical processes. In numerical simulations, these processes need to be calculated in a certain sequence. This study reveals the weaknesses of the sequence of calculations used for aerosol processes in a global atmosphere model. A revision of the sequence is proposed and its impacts on the simulated global aerosol climatology are evaluated.
Christopher J. Vogl, Hui Wan, Carol S. Woodward, and Quan M. Bui
Geosci. Model Dev., 17, 1409–1428, https://doi.org/10.5194/gmd-17-1409-2024, https://doi.org/10.5194/gmd-17-1409-2024, 2024
Short summary
Short summary
Generally speaking, accurate climate simulation requires an accurate evolution of the underlying mathematical equations on large computers. The equations are typically formulated and evolved in process groups. Process coupling refers to how the evolution of each group is combined with that of other groups to evolve the full set of equations for the whole atmosphere. This work presents a mathematical framework to evaluate methods without the need to first implement the methods.
Tom Keel, Chris Brierley, and Tamsin Edwards
Geosci. Model Dev., 17, 1229–1247, https://doi.org/10.5194/gmd-17-1229-2024, https://doi.org/10.5194/gmd-17-1229-2024, 2024
Short summary
Short summary
Jet streams are an important control on surface weather as their speed and shape can modify the properties of weather systems. Establishing trends in the operation of jet streams may provide some indication of the future of weather in a warming world. Despite this, it has not been easy to establish trends, as many methods have been used to characterise them in data. We introduce a tool containing various implementations of jet stream statistics and algorithms that works in a standardised manner.
Frédéric Parrenin, Marie Bouchet, Christo Buizert, Emilie Capron, Ellen Corrick, Russell Drysdale, Kenji Kawamura, Amaëlle Landais, Robert Mulvaney, Ikumi Oyabu, and Sune Rasmussen
EGUsphere, https://doi.org/10.5194/egusphere-2023-2911, https://doi.org/10.5194/egusphere-2023-2911, 2024
Short summary
Short summary
The Paleochrono1 probablistic dating model allows to derive a common and optimized chronology for several paleoclimatic sites from various archives (ice cores, speleothems, marine cores, lake cores, etc.). It combines prior sedimentation scenarios with chronological information such as dated horizons, dated intervals, stratigraphic links and (for ice cores) Delta-depth observations. Paleochrono1 is available under the MIT open-source license.
Amir Golparvar, Matthias Kästner, and Martin Thullner
Geosci. Model Dev., 17, 881–898, https://doi.org/10.5194/gmd-17-881-2024, https://doi.org/10.5194/gmd-17-881-2024, 2024
Short summary
Short summary
Coupled reaction transport modelling is an established and beneficial method for studying natural and synthetic porous material, with applications ranging from industrial processes to natural decompositions in terrestrial environments. Up to now, a framework that explicitly considers the porous structure (e.g. from µ-CT images) for modelling the transport of reactive species is missing. We presented a model that overcomes this limitation and represents a novel numerical simulation toolbox.
Stefan Hergarten
Geosci. Model Dev., 17, 781–794, https://doi.org/10.5194/gmd-17-781-2024, https://doi.org/10.5194/gmd-17-781-2024, 2024
Short summary
Short summary
The Voellmy rheology has been widely used for simulating snow and rock avalanches. Recently, a modified version of this rheology was proposed, which turned out to be able to predict the observed long runout of large rock avalanches theoretically. The software MinVoellmy presented here is the first numerical implementation of the modified rheology. It consists of MATLAB and Python classes, where simplicity and parsimony were the design goals.
Arjun Babu Nellikkattil, Danielle Lemmon, Travis Allen O'Brien, June-Yi Lee, and Jung-Eun Chu
Geosci. Model Dev., 17, 301–320, https://doi.org/10.5194/gmd-17-301-2024, https://doi.org/10.5194/gmd-17-301-2024, 2024
Short summary
Short summary
This study introduces a new computational framework called Scalable Feature Extraction and Tracking (SCAFET), designed to extract and track features in climate data. SCAFET stands out by using innovative shape-based metrics to identify features without relying on preconceived assumptions about the climate model or mean state. This approach allows more accurate comparisons between different models and scenarios.
Mohammad Mortezazadeh, Jean-François Cossette, Ashu Dastoor, Jean de Grandpré, Irena Ivanova, and Abdessamad Qaddouri
Geosci. Model Dev., 17, 335–346, https://doi.org/10.5194/gmd-17-335-2024, https://doi.org/10.5194/gmd-17-335-2024, 2024
Short summary
Short summary
The interpolation process is the most computationally expensive step of the semi-Lagrangian (SL) approach. In this paper we implement a new interpolation scheme into the semi-Lagrangian approach which has the same computational cost as a third-order polynomial scheme but with the accuracy of a fourth-order interpolation scheme. This improvement is achieved by using two third-order backward and forward polynomial interpolation schemes in two consecutive time steps.
Boris Gailleton, Luca C. Malatesta, Guillaume Cordonnier, and Jean Braun
Geosci. Model Dev., 17, 71–90, https://doi.org/10.5194/gmd-17-71-2024, https://doi.org/10.5194/gmd-17-71-2024, 2024
Short summary
Short summary
This contribution presents a new method to numerically explore the evolution of mountain ranges and surrounding areas. The method helps in monitoring with details on the timing and travel path of material eroded from the mountain ranges. It is particularly well suited to studies juxtaposing different domains – lakes or multiple rock types, for example – and enables the combination of different processes.
Denise Degen, Daniel Caviedes Voullième, Susanne Buiter, Harrie-Jan Hendricks Franssen, Harry Vereecken, Ana González-Nicolás, and Florian Wellmann
Geosci. Model Dev., 16, 7375–7409, https://doi.org/10.5194/gmd-16-7375-2023, https://doi.org/10.5194/gmd-16-7375-2023, 2023
Short summary
Short summary
In geosciences, we often use simulations based on physical laws. These simulations can be computationally expensive, which is a problem if simulations must be performed many times (e.g., to add error bounds). We show how a novel machine learning method helps to reduce simulation time. In comparison to other approaches, which typically only look at the output of a simulation, the method considers physical laws in the simulation itself. The method provides reliable results faster than standard.
Carlos Spa, Otilio Rojas, and Josep de la Puente
Geosci. Model Dev., 16, 7237–7252, https://doi.org/10.5194/gmd-16-7237-2023, https://doi.org/10.5194/gmd-16-7237-2023, 2023
Short summary
Short summary
This paper develops a calibration methodology of all absorbing techniques typically used by Fourier pseudo-spectral time-domain (PSTD) methods for geoacoustic wave simulations. The main contributions of the paper are (a) an implementation and quantitative comparison of all absorbing techniques available for PSTD methods through a simple and robust numerical experiment, and (b) a validation of these absorbing techniques in several 3-D seismic scenarios with gradual heterogeneity complexities.
Joonlee Lee, Myong-In Lee, Sunlae Tak, Eunkyo Seo, and Yong-Keun Lee
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-221, https://doi.org/10.5194/gmd-2023-221, 2023
Revised manuscript accepted for GMD
Short summary
Short summary
We developed a snow assimilation system using satellite data based on a land surface model. The snow states produced by the assimilation system demonstrate high performance in all regions, including transition regions, compared to the satellite data and land model. As snow significantly influences energy and water balance at the atmosphere-land boundary, this approach allows for a more accurate prediction of atmospheric conditions by realistically representing atmosphere-land interactions.
Michael Hillier, Florian Wellmann, Eric A. de Kemp, Boyan Brodaric, Ernst Schetselaar, and Karine Bédard
Geosci. Model Dev., 16, 6987–7012, https://doi.org/10.5194/gmd-16-6987-2023, https://doi.org/10.5194/gmd-16-6987-2023, 2023
Short summary
Short summary
Neural networks can be used effectively to model three-dimensional geological structures from point data, sampling geological interfaces, units, and structural orientations. Existing neural network approaches for this type of modelling are advanced by the efficient incorporation of unconformities, new knowledge inputs, and improved data fitting techniques. These advances permit the modelling of more complex geology in diverse geological settings, different-sized areas, and various data regimes.
Tor Nordam, Ruben Kristiansen, Raymond Nepstad, Erik van Sebille, and Andy M. Booth
Geosci. Model Dev., 16, 5339–5363, https://doi.org/10.5194/gmd-16-5339-2023, https://doi.org/10.5194/gmd-16-5339-2023, 2023
Short summary
Short summary
We describe and compare two common methods, Eulerian and Lagrangian models, used to simulate the vertical transport of material in the ocean. They both solve the same transport problems but use different approaches for representing the underlying equations on the computer. The main focus of our study is on the numerical accuracy of the two approaches. Our results should be useful for other researchers creating or using these types of transport models.
Mathieu Gravey and Grégoire Mariethoz
Geosci. Model Dev., 16, 5265–5279, https://doi.org/10.5194/gmd-16-5265-2023, https://doi.org/10.5194/gmd-16-5265-2023, 2023
Short summary
Short summary
Multiple‐point geostatistics are widely used to simulate complex spatial structures based on a training image. The use of these methods relies on the possibility of finding optimal training images and parametrization of the simulation algorithms. Here, we propose finding an optimal set of parameters using only the training image as input. The main advantage of our approach is to remove the risk of overfitting an objective function.
Siting Li, Ping Wang, Hong Wang, Yue Peng, Zhaodong Liu, Wenjie Zhang, Hongli Liu, Yaqiang Wang, Huizheng Che, and Xiaoye Zhang
Geosci. Model Dev., 16, 4171–4191, https://doi.org/10.5194/gmd-16-4171-2023, https://doi.org/10.5194/gmd-16-4171-2023, 2023
Short summary
Short summary
Optimizing the initial state of atmospheric chemistry model input is one of the most essential methods to improve forecast accuracy. Considering the large computational load of the model, we introduce an ensemble optimal interpolation scheme (EnOI) for operational use and efficient updating of the initial fields of chemical components. The results suggest that EnOI provides a practical and cost-effective technique for improving the accuracy of chemical weather numerical forecasts.
Thomas Richter, Véronique Dansereau, Christian Lessig, and Piotr Minakowski
Geosci. Model Dev., 16, 3907–3926, https://doi.org/10.5194/gmd-16-3907-2023, https://doi.org/10.5194/gmd-16-3907-2023, 2023
Short summary
Short summary
Sea ice covers not only the pole regions but affects the weather and climate globally. For example, its white surface reflects more sunlight than land. The oceans around the poles are therefore kept cool, which affects the circulation in the oceans worldwide. Simulating the behavior and changes in sea ice on a computer is, however, very difficult. We propose a new computer simulation that better models how cracks in the ice change over time and show this by comparing to other simulations.
Emma J. MacKie, Michael Field, Lijing Wang, Zhen Yin, Nathan Schoedl, Matthew Hibbs, and Allan Zhang
Geosci. Model Dev., 16, 3765–3783, https://doi.org/10.5194/gmd-16-3765-2023, https://doi.org/10.5194/gmd-16-3765-2023, 2023
Short summary
Short summary
Earth scientists often have to fill in spatial gaps in measurements. This gap-filling or interpolation can be accomplished with geostatistical methods, where the statistical relationships between measurements are used to inform how these gaps should be filled. Despite the broad utility of these methods, there are few freely available geostatistical software applications. We present GStatSim, a Python package for performing different geostatistical interpolation methods.
Ian Madden, Simone Marras, and Jenny Suckale
Geosci. Model Dev., 16, 3479–3500, https://doi.org/10.5194/gmd-16-3479-2023, https://doi.org/10.5194/gmd-16-3479-2023, 2023
Short summary
Short summary
To aid risk managers who may wish to rapidly assess tsunami risk but may lack high-performance computing infrastructure, we provide an accessible software package able to rapidly model tsunami inundation over real topography by leveraging Google's Tensor Processing Unit, a high-performance hardware. Minimally trained users can take advantage of the rapid modeling abilities provided by this package via a web browser thanks to the ease of use of Google Cloud Platform.
Youtong Rong, Paul Bates, and Jeffrey Neal
Geosci. Model Dev., 16, 3291–3311, https://doi.org/10.5194/gmd-16-3291-2023, https://doi.org/10.5194/gmd-16-3291-2023, 2023
Short summary
Short summary
A novel subgrid channel (SGC) model is developed for river–floodplain modelling, allowing utilization of subgrid-scale bathymetric information while performing computations on relatively coarse grids. By including adaptive artificial diffusion, potential numerical instability, which the original SGC solver had, in low-friction regions such as urban areas is addressed. Evaluation of the new SGC model through structured tests confirmed that the accuracy and stability have improved.
Xiaqiong Zhou and Hann-Ming Henry Juang
Geosci. Model Dev., 16, 3263–3274, https://doi.org/10.5194/gmd-16-3263-2023, https://doi.org/10.5194/gmd-16-3263-2023, 2023
Short summary
Short summary
The National Centers for Environmental Prediction Global Forecast System version 16 experienced model instability failures in real-time runs resolved by increasing the minimum thickness depth parameter. Further investigation revealed that the issue was caused by the advection of geopotential heights at the model's layer interfaces. By replacing high-order boundary conditions with zero-gradient boundary conditions for interface-wind reconstruction, the instability was effectively addressed.
Grant T. Euen, Shangxin Liu, Rene Gassmöller, Timo Heister, and Scott D. King
Geosci. Model Dev., 16, 3221–3239, https://doi.org/10.5194/gmd-16-3221-2023, https://doi.org/10.5194/gmd-16-3221-2023, 2023
Short summary
Short summary
Due to the increasing availability of high-performance computing over the past few decades, numerical models have become an important tool for research. Here we test two geodynamic codes that produce such models: ASPECT, a newer code, and CitcomS, an older one. We show that they produce solutions that are extremely close. As methods and codes become more complex over time, showing reproducibility allows us to seamlessly link previously known information to modern methodologies.
Mohammad Kazem Sharifian, Georges Kesserwani, Alovya Ahmed Chowdhury, Jeffrey Neal, and Paul Bates
Geosci. Model Dev., 16, 2391–2413, https://doi.org/10.5194/gmd-16-2391-2023, https://doi.org/10.5194/gmd-16-2391-2023, 2023
Short summary
Short summary
This paper describes a new release of the LISFLOOD-FP model for fast and efficient flood simulations. It features a new non-uniform grid generator that uses multiwavelet analyses to sensibly coarsens the resolutions where the local topographic variations are smooth. Moreover, the model is parallelised on the graphical processing units (GPUs) to further boost computational efficiency. The performance of the model is assessed for five real-world case studies, noting its potential applications.
Bruno K. Zürcher
Geosci. Model Dev., 16, 1697–1711, https://doi.org/10.5194/gmd-16-1697-2023, https://doi.org/10.5194/gmd-16-1697-2023, 2023
Short summary
Short summary
We present a novel algorithm to efficiently compute Barnes interpolation, which is a method for transforming data values recorded at irregularly spaced points into a corresponding regular grid. In contrast to naive implementations with an algorithmic complexity that depends on the product of the number of sample points and the number of grid points, our approach reduces this dependency to their sum.
David H. Marsico and Paul A. Ullrich
Geosci. Model Dev., 16, 1537–1551, https://doi.org/10.5194/gmd-16-1537-2023, https://doi.org/10.5194/gmd-16-1537-2023, 2023
Short summary
Short summary
Climate models involve several different components, such as the atmosphere, ocean, and land models. Information needs to be exchanged, or remapped, between these models, and devising algorithms for performing this exchange is important for ensuring the accuracy of climate simulations. In this paper, we examine the efficacy of several traditional and novel approaches to remapping on the sphere and demonstrate where our approaches offer improvement.
Moritz Liebl, Jörg Robl, Stefan Hergarten, David Lundbek Egholm, and Kurt Stüwe
Geosci. Model Dev., 16, 1315–1343, https://doi.org/10.5194/gmd-16-1315-2023, https://doi.org/10.5194/gmd-16-1315-2023, 2023
Short summary
Short summary
In this study, we benchmark a topography-based model for glacier erosion (OpenLEM) with a well-established process-based model (iSOSIA). Our experiments show that large-scale erosion patterns and particularly the transformation of valley length geometry from fluvial to glacial conditions are very similar in both models. This finding enables the application of OpenLEM to study the influence of climate and tectonics on glaciated mountains with reasonable computational effort on standard PCs.
James Kent, Thomas Melvin, and Golo Albert Wimmer
Geosci. Model Dev., 16, 1265–1276, https://doi.org/10.5194/gmd-16-1265-2023, https://doi.org/10.5194/gmd-16-1265-2023, 2023
Short summary
Short summary
This paper introduces the Met Office's new shallow water model. The shallow water model is a building block towards the Met Office's new atmospheric dynamical core. The shallow water model is tested on a number of standard spherical shallow water test cases, including flow over mountains and unstable jets. Results show that the model produces similar results to other shallow water models in the literature.
Anthony Gruber, Max Gunzburger, Lili Ju, Rihui Lan, and Zhu Wang
Geosci. Model Dev., 16, 1213–1229, https://doi.org/10.5194/gmd-16-1213-2023, https://doi.org/10.5194/gmd-16-1213-2023, 2023
Short summary
Short summary
This work applies a novel technical tool, multifidelity Monte Carlo (MFMC) estimation, to three climate-related benchmark experiments involving oceanic, atmospheric, and glacial modeling. By considering useful quantities such as maximum sea height and total (kinetic) energy, we show that MFMC leads to predictions which are more accurate and less costly than those obtained by standard methods. This suggests MFMC as a potential drop-in replacement for estimation in realistic climate models.
Piyoosh Jaysaval, Glenn E. Hammond, and Timothy C. Johnson
Geosci. Model Dev., 16, 961–976, https://doi.org/10.5194/gmd-16-961-2023, https://doi.org/10.5194/gmd-16-961-2023, 2023
Short summary
Short summary
We present a robust and highly scalable implementation of numerical forward modeling and inversion algorithms for geophysical electrical resistivity tomography data. The implementation is publicly available and developed within the framework of PFLOTRAN (http://www.pflotran.org), an open-source, state-of-the-art massively parallel subsurface flow and transport simulation code. The paper details all the theoretical and implementation aspects of the new capabilities along with test examples.
Cited articles
Androsov, A. A., Klevanny, K. A., Salusti, E. S., and Voltzinger, N. E.: Open
boundary conditions for horizontal 2-D curvilinear-grid long-wave dynamics of
a strait, Adv. Water Resour., 18, 267–276,
https://doi.org/10.1016/0309-1708(95)00017-D, 1995. a
Barnier, B., Siefridt, L., and Marchesiello, P.: Thermal forcing for a global
ocean circulation model using a three-year climatology of ECMWF analyses, J.
Marine Syst., 6, 363–380, https://doi.org/10.1016/0924-7963(94)00034-9, 1995. a
Baschek, B., Schroeder, F., Brix, H., Riethmüller, R., Badewien, T. H.,
Breitbach, G., Brügge, B., Colijn, F., Doerffer, R., Eschenbach, C.,
Friedrich, J., Fischer, P., Garthe, S., Horstmann, J., Krasemann, H.,
Metfies, K., Merckelbach, L., Ohle, N., Petersen, W., Pröfrock, D.,
Röttgers, R., Schlüter, M., Schulz, J., Schulz-Stellenfleth, J.,
Stanev, E., Staneva, J., Winter, C., Wirtz, K., Wollschläger, J.,
Zielinski, O., and Ziemer, F.: The Coastal Observing System for Northern and
Arctic Seas (COSYNA), Ocean Sci., 13, 379–410, https://doi.org/10.5194/os-13-379-2017,
2017. a
Becherer, J., Burchard, H., Floeser, G., Mohrholz, V., and Umlauf, L.:
Evidence of tidal straining in well-mixed channel flow from micro-structure
observations, Geophys. Res. Lett., 38, L17611, https://doi.org/10.1029/2011GL049005,
2011. a
Benjamin, T. B.: Gravity currents and related phenomena, J. Fluid Mech., 31,
209–248, 1968.
Burchard, H. and Bolding, K.: GETM, a general estuarine transport model.
Scientific documentation, European Commission, Tech. Rep. EUR 20253 EN, 2002. a
Burchard, H., Flöser, G., Staneva, J. V., Badewien, T. H., and
Riethmüller, R.: Impact of Density Gradients on Net Sediment Transport
into the Wadden Sea, J. Phys. Oceanogr., 38, 566–587,
https://doi.org/10.1175/2007JPO3796.1, 2008. a, b
Casulli, V. and Walters, R. A.: An unstructured grid, three-dimensional model
based on the shallow water equations, Int. J. Numer. Meth. Fl., 32, 331–348,
2000. a
Cebeci, T. and Smith, A. M. O.: Analysis of Turbulent Boundary Layers,
Academic Press, New York, 1974. a
Cheng, Y., Canuto, V. M., and Howard, A. M.: An improved model for the
turbulent PBL, J. Atmos. Sci., 59, 1550–1565, 2002. a
Danilov, S.: Two finite-volume unstructured mesh models for large-scale ocean
modeling, Ocean Model., 47, 14–25, https://doi.org/10.1016/j.ocemod.2012.01.004, 2012. a, b
Danilov, S. and Androsov, A.: Cell-vertex discretization of shallow water
equations on mixed unstructured meshes, Ocean Dynam., 65, 33–47,
https://doi.org/10.1007/s10236-014-0790-x, 2015. a, b, c
Danilov, S., Sidorenko, D., Wang, Q., and Jung, T.: The Finite-volumE Sea
ice–Ocean Model (FESOM2), Geosci. Model Dev., 10, 765–789,
https://doi.org/10.5194/gmd-10-765-2017, 2017. a, b, c
Deleersnijder, E. and Roland, M.: Preliminary tests of a hybrid
numerical-asymptotic method for solving nonlinear advection-diffusion
equations in a domain limited by a selfadjusting boundary, Math. Comput.
Model., 17, 35–47, 1993. a
Deleersnijder, E.: Numerical mass conservation in a free-surface sigma
coordinate marine model with mode splitting, J. Marine Syst., 4, 365–370,
1993. a
Flöser, G., Burchard, H., and Riethmüller, R.: Observational evidence
for estuarine circulation in the German Wadden Sea, Cont. Shelf Res., 31,
1633–1639, 2011. a
Fringer, O. B., Gerritsen, M., and Street, R. L.: An unstructured-grid,
finite-volume, nonhydrostatic, parallel coastal ocean simulator, Ocean
Model., 14, 139–173, 2006. a
Gadd, A. J.: A split explicit integration scheme for numerical weather
prediction, Q. J. Roy. Meteor. Soc., 104, 569–582,
https://doi.org/10.1002/qj.49710444103, 1978. a
Higdon, R. L.: A comparison of two formulations of barotropic-baroclinic
splitting for layered models of ocean circulation, Ocean Model., 24, 29–45,
2008. a
Idier, D., Paris, F., Cozannet, G. L., Boulahya, F., and Dumas, F.: Sea-level
rise impacts on the tides of the European Shelf, Cont. Shelf Res., 137,
56–71, 2017. a
Kalnay, E., Kanamitsu, M., Kistler, R., Collins, W., Deaven, D., Gandin, L.,
Iredell, M., Saha, S., White, G., Woollen, J., Zhu, Y., Leetmaa, A.,
Reynolds, B., Chelliah, M., Ebisuzaki, W., Higgins, W., Janowiak, J., Mo, K.
C., Ropelewski, C., Wang, J., Jenne, R., and Joseph, D.: The NCEP/NCAR
40-Year Reanalysis Project. B. Am. Meteorol. Soc., 77, 437–472, 1996. a, b
Kappenberg, J., Berendt, M., Ohle, N., Riethmuller, R., Schuster, D., and
Strotmann, T.: Variation of Hydrodynamics and Water Constituents in the Mouth
of the Elbe Estuary, Germany, Civil Eng. Res. J., 4, 555643,
https://doi.org/10.19080/CERJ.2018.04.555643, 2018. a
Kerimoglu, O., Hofmeister, R., Maerz, J., Riethmüller, R., and Wirtz, K.
W.: The acclimative biogeochemical model of the southern North Sea,
Biogeosciences, 14, 4499–4531, https://doi.org/10.5194/bg-14-4499-2017, 2017. a
Lazure, P. and Dumas F.: An external–internal mode coupling for a 3D
hydrodynamical model for applications at regional scale (MARS), Adv. Water
Resour., 31, 233–250, 2008. a
Le Roux, D. Y.: Spurious inertial oscillations in shallow-water models, J.
Comput. Phys., 231, 7959–7987, 2012. a
Lumborg, U. and Pejrup, M.: Modelling of cohesive sediment transport in a
tidal lagoon an annual budget, Mar. Geol., 218, 1–16, 2005. a
Luyten, P. J., Jones, J. E., Proctor, R., Tabor, A., Tett P., and Wild-Allen,
K., COHERENS – A coupled hydrodynamical-ecological model for regional and
shelf seas: User Documentation. MUMM Report, Management Unit of the
Mathematical Models of the north Sea, Belgium, 911 pp., 1999. a
Marchesiello, P., McWilliams J. C., and Shchepetkin, A.: Open boundary
conditions for long-term integration of regional oceanic models, Ocean
Model., 3, 1–20, https://doi.org/10.1016/S1463-5003(00)00013-5, 2001. a
Marshall, J., Hill, C., Perelman, L., and Adcroft, A.: Hydrostatic,
quasi-hydrostatic, and nonhydrostatic ocean modeling, J. Geophys. Res., 102,
5733–5752, https://doi.org/10.1029/96JC02776, 1997. a
Maßmann, S., Androsov, A., and Danilov, S.: Intercomparison between
finite element and finite volume approaches to model North Sea tides, Cont.
Shelf Res., 30, 680–691, https://doi.org/10.1016/j.csr.2009.07.004, 2010. a, b
Miura, H.: An upwind-biased conservative advection scheme for spherical
hexagonal-pentagonal grids, Mon. Weather Rev., 135, 4038–4044, 2007. a
Pätsch, J. and Lenhart, H. J.: Daily Loads of Nutrients, Total
Alkalinity, Dissolved Inorganic Carbon and Dissolved Organic Carbon of the
European Continental Rivers for the Years 1977–2002, Berichte aus dem
Zentrum für Meeres- und Klimaforschung/B: Ozeanographie/Institut für
Meereskunde, Inst. für Meereskunde, Universität Hamburg, Germany,
2011. a
Pätsch, J. and Lenhart, H. J.: Daily Loads of Nutrients, Total
Alkalinity, Dissolved Inorganic Carbon and Dissolved Organic Carbon of the
European Continental Rivers for the Years 1977–2002, Berichte aus dem
Zentrum für Meeres- und Klimaforschung; Reihe B: Ozeanographie, 48,
159 pp., 2004.
Phillips, N. A.: A coordinate system having some special advantages for
numerical forecasting, J. Meteorol., 14, 184–185, 1957. a
Purkiani, K., Becherer, J., Flöser, G., Gräwe, U., Mohrholz, V.,
Schuttelaars, H. M., and Burchard, H.: Numerical analysis of stratification
and destratification processes in a tidally energetic inlet with an ebb tidal
delta, J. Geophys. Res.-Oceans, 120, 225–243, https://doi.org/10.1002/2014JC010325,
2014. a, b
Radach, G. and Pätsch, J.: Variability of continental riverine freshwater
and nutrient inputs into the North Sea for the years 1977–2000 and its
consequences for the assessment of eutrophication, Estuar. Coast., 30,
66–81, 2007. a
Raymond, H. W. and Kuo, L. H.: A radiation boundary condition for
multi-dimensional flows, Q. J. Roy. Meteor. Soc., 110, 535–551,
https://doi.org/10.1002/qj.49711046414, 1984. a
Reid, R. O.: Modification of the quadratic bottom-stress law for turbulent
channel flow in the presence of surface wind-stress, U.S. Army Corps of
Engineers, Beach Erosion Board. Tech. Memo., 3, 33 pp., 1957. a
Remacle, J.-F., Lambrechts, J., Seny, B., Marchandise, E., Johnen A., and
Geuzainet, C.: Blossom-Quad: A non-uniform quadrilateral mesh generator using
a minimum-cost perfect-matching algorithm, Int. J. Numer. Meth. Eng., 89,
1102–1119, 2012. a
Stelling, G. S. and Duinmeijer, S. P. A.: A staggered conservative scheme for
every Froude number in rapidly varied shallow water flows, Int. J. Numer.
Meth. Fl., 43, 1329–1354, https://doi.org/10.1002/fld.537, 2003. a
Umlauf, L. and Burchard, H.: Second-order turbulence closure models for
geophysical boundary layers. A review of recent work, Cont. Shelf Res., 25,
795–827, 2005. a
Umlauf, L., Burchard, H., and Bolding, K.: General Ocean Turbulence Model.
Scientific documentation, v3.2, Marine Science Reports 63, 274 pp., 2005. a
Umlauf, L., Burchard, H., and Bolding, K.: GOTM, Sourcecode and Test Case
Documentation, Version 4.0, available at:
https://gotm.net/manual/stable/pdf/a4.pdf (last access: 1 March 2019),
2007.
a
Voltzinger, N. E.: Long Waves on Shallow Water, Gidrometioizdat, Leningrad,
160 pp., 1985 (in Russian). a
Voltzinger, N. E., Klevanny, K. A., and Pelinovsky, E. N.: Long-Wave Dynamics
of the Coastal Zone, Gidrometioizdat, Leningrad, 272 pp., 1989 (in Russian). a
Voynova, Y. G., Brix, H., Petersen, W., Weigelt-Krenz, S., and Scharfe, M.:
Extreme flood impact on estuarine and coastal biogeochemistry: the 2013 Elbe
flood, Biogeosciences, 14, 541–557, https://doi.org/10.5194/bg-14-541-2017, 2017. a
Weisse, R., Bisling, P., Gaslikova, L., Geyer, B., Groll, N., Hortamani, M.,
Matthias, V., Maneke, M., Meinke, I., Meyer, E., Schwichtenberg, F., Stempinski,
F., Wiese, F., and Wöckner-Kluwe, K.: Climate services for marine applications
in Europe, Earth Perspectives, 2, 3, https://doi.org/10.1186/s40322-015-0029-0, 2015. a, b
Wang, Q., Danilov, S., Sidorenko, D., Timmermann, R., Wekerle, C., Wang, X.,
Jung, T., and Schröter, J.: The Finite Element Sea Ice–Ocean Model
(FESOM) v.1.4: formulation of an ocean general circulation model, Geosci.
Model Dev., 7, 663–693, https://doi.org/10.5194/gmd-7-663-2014, 2014.
Zhang, Y. and Baptista, A. M.: SELFE: A semi-implicit Eulerian-Lagrangian
finite-element model for cross-scale ocean circulation, Ocean Model., 21,
71–96, 2008. a
Zhang, Y. J., Ye, F., Stanev, E. V., and Grashorn, S.: Seamless cross-scale
modeling with SCHISM, Ocean Model., 102, 64–81,
https://doi.org/10.1016/j.ocemod.2016.05.002, 2016. a
Short summary
We present a description of a coastal ocean circulation model designed to work on variable-resolution meshes made of triangular and quadrilateral cells. This hybrid mesh functionality allows for higher numerical performance and less dissipative solutions.
We present a description of a coastal ocean circulation model designed to work on...
