Articles | Volume 6, issue 4
https://doi.org/10.5194/gmd-6-1367-2013
© Author(s) 2013. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/gmd-6-1367-2013
© Author(s) 2013. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Development and technical paper
| 
30 Aug 2013
Development and technical paper |
| 30 Aug 2013
Mathematics of the total alkalinity–pH equation – pathway to robust and universal solution algorithms: the SolveSAPHE package v1.0.1
G. Munhoven
Département d'Astrophysique, Géophysique et Océanographie, Université de Liège, 4000 Liège, Belgium
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Coral reefs are under threat due to warming and ocean acidification. It is difficult to project future coral reef production due to uncertainties in climate models, socio-economic scenarios and coral adaptation to warming. Here we have included a coral reef module within a climate model for the first time to evaluate the range of possible futures. We show that coral reef production decreases in most future scenarios, but in some cases coral reef carbonate production can persist.
Nathaelle Bouttes, Lester Kwiatkowski, Manon Berger, Victor Brovkin, and Guy Munhoven
Geosci. Model Dev., 17, 6513–6528, https://doi.org/10.5194/gmd-17-6513-2024, https://doi.org/10.5194/gmd-17-6513-2024, 2024
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Coral reefs are crucial for biodiversity, but they also play a role in the carbon cycle on long time scales of a few thousand years. To better simulate the future and past evolution of coral reefs and their effect on the global carbon cycle, hence on atmospheric CO2 concentration, it is necessary to include coral reefs within a climate model. Here we describe the inclusion of coral reef carbonate production in a carbon–climate model and its validation in comparison to existing modern data.
Ying Ye, Guy Munhoven, Peter Köhler, Martin Butzin, Judith Hauck, Özgür Gürses, and Christoph Völker
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-181, https://doi.org/10.5194/gmd-2023-181, 2023
Revised manuscript accepted for GMD
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Many biogeochemistry models assume all material reaching the seafloor is remineralized and returned to solution, which is sufficient for studies on short-term climate change. Under long-term climate change the storage of carbon in sediments slows down carbon cycling and influences feedbacks in the atmosphere-ocean-sediment system. Here we coupled a sediment model to an ocean biogeochemistry model and found a shift of carbon storage from the atmosphere to the ocean-sediment system.
Matteo Willeit, Tatiana Ilyina, Bo Liu, Christoph Heinze, Mahé Perrette, Malte Heinemann, Daniela Dalmonech, Victor Brovkin, Guy Munhoven, Janine Börker, Jens Hartmann, Gibran Romero-Mujalli, and Andrey Ganopolski
Geosci. Model Dev., 16, 3501–3534, https://doi.org/10.5194/gmd-16-3501-2023, https://doi.org/10.5194/gmd-16-3501-2023, 2023
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In this paper we present the carbon cycle component of the newly developed fast Earth system model CLIMBER-X. The model can be run with interactive atmospheric CO2 to investigate the feedbacks between climate and the carbon cycle on temporal scales ranging from decades to > 100 000 years. CLIMBER-X is expected to be a useful tool for studying past climate–carbon cycle changes and for the investigation of the long-term future evolution of the Earth system.
Guy Munhoven
Geosci. Model Dev., 14, 4225–4240, https://doi.org/10.5194/gmd-14-4225-2021, https://doi.org/10.5194/gmd-14-4225-2021, 2021
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SolveSAPHE (Munhoven, 2013) was the first package to calculate pH reliably from any physically sensible pair of total alkalinity (AlkT) and dissolved inorganic carbon (CT) data and to do so in an autonomous and efficient way. Here, we extend it to use CO2, HCO3 or CO3 instead of CT. For each one of these pairs, the new SolveSAPHE calculates all of the possible pH values (0, 1, or 2), again without any prior knowledge of the solutions.
Guy Munhoven
Geosci. Model Dev., 14, 3603–3631, https://doi.org/10.5194/gmd-14-3603-2021, https://doi.org/10.5194/gmd-14-3603-2021, 2021
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Sea-floor sediments play an important role in biogeochemical cycling of elements (e.g. carbon, silicon, nutrients) in the ocean. Realistic sediment modules are, however, not yet commonly used in global ocean biogeochemical models. Here we present MEDUSA, a model of the processes taking place in the surface sea-floor sediments which control the interaction between the sediments and the ocean. MEDUSA can be configured to meet the exact needs of any given ocean biogeochemical model.
Takasumi Kurahashi-Nakamura, André Paul, Guy Munhoven, Ute Merkel, and Michael Schulz
Geosci. Model Dev., 13, 825–840, https://doi.org/10.5194/gmd-13-825-2020, https://doi.org/10.5194/gmd-13-825-2020, 2020
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Chemical processes in ocean-floor sediments have a large influence on the marine carbon cycle, hence the global climate, at long timescales. We developed a new coupling scheme for a chemical sediment model and a comprehensive climate model. The new coupled model outperformed the original uncoupled climate model in reproducing the global distribution of sediment properties. The sediment model will also act as a
bridgebetween the ocean model and paleoceanographic data.
Thomas Kleinen, Victor Brovkin, and Guy Munhoven
Clim. Past, 12, 2145–2160, https://doi.org/10.5194/cp-12-2145-2016, https://doi.org/10.5194/cp-12-2145-2016, 2016
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We investigate trends in atmospheric CO2 during three recent interglacials – the Holocene, the Eemian and MIS 11 – using an earth system model of intermediate complexity. Our model experiments show a considerable improvement in the modelled CO2 trends for all three interglacials if peat accumulation and shallow water CaCO3 sedimentation are included, forcing the model only with orbital and sea level changes. The Holocene CO2 trend requires anthropogenic emissions of CO2 only after 3 ka BP.
Nathaelle Bouttes, Lester Kwiatkowski, Elodie Bougeot, Manon Berger, Victor Brovkin, and Guy Munhoven
EGUsphere, https://doi.org/10.5194/egusphere-2024-3738, https://doi.org/10.5194/egusphere-2024-3738, 2024
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Coral reefs are under threat due to warming and ocean acidification. It is difficult to project future coral reef production due to uncertainties in climate models, socio-economic scenarios and coral adaptation to warming. Here we have included a coral reef module within a climate model for the first time to evaluate the range of possible futures. We show that coral reef production decreases in most future scenarios, but in some cases coral reef carbonate production can persist.
Nathaelle Bouttes, Lester Kwiatkowski, Manon Berger, Victor Brovkin, and Guy Munhoven
Geosci. Model Dev., 17, 6513–6528, https://doi.org/10.5194/gmd-17-6513-2024, https://doi.org/10.5194/gmd-17-6513-2024, 2024
Short summary
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Coral reefs are crucial for biodiversity, but they also play a role in the carbon cycle on long time scales of a few thousand years. To better simulate the future and past evolution of coral reefs and their effect on the global carbon cycle, hence on atmospheric CO2 concentration, it is necessary to include coral reefs within a climate model. Here we describe the inclusion of coral reef carbonate production in a carbon–climate model and its validation in comparison to existing modern data.
Ying Ye, Guy Munhoven, Peter Köhler, Martin Butzin, Judith Hauck, Özgür Gürses, and Christoph Völker
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-181, https://doi.org/10.5194/gmd-2023-181, 2023
Revised manuscript accepted for GMD
Short summary
Short summary
Many biogeochemistry models assume all material reaching the seafloor is remineralized and returned to solution, which is sufficient for studies on short-term climate change. Under long-term climate change the storage of carbon in sediments slows down carbon cycling and influences feedbacks in the atmosphere-ocean-sediment system. Here we coupled a sediment model to an ocean biogeochemistry model and found a shift of carbon storage from the atmosphere to the ocean-sediment system.
Matteo Willeit, Tatiana Ilyina, Bo Liu, Christoph Heinze, Mahé Perrette, Malte Heinemann, Daniela Dalmonech, Victor Brovkin, Guy Munhoven, Janine Börker, Jens Hartmann, Gibran Romero-Mujalli, and Andrey Ganopolski
Geosci. Model Dev., 16, 3501–3534, https://doi.org/10.5194/gmd-16-3501-2023, https://doi.org/10.5194/gmd-16-3501-2023, 2023
Short summary
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In this paper we present the carbon cycle component of the newly developed fast Earth system model CLIMBER-X. The model can be run with interactive atmospheric CO2 to investigate the feedbacks between climate and the carbon cycle on temporal scales ranging from decades to > 100 000 years. CLIMBER-X is expected to be a useful tool for studying past climate–carbon cycle changes and for the investigation of the long-term future evolution of the Earth system.
Guy Munhoven
Geosci. Model Dev., 14, 4225–4240, https://doi.org/10.5194/gmd-14-4225-2021, https://doi.org/10.5194/gmd-14-4225-2021, 2021
Short summary
Short summary
SolveSAPHE (Munhoven, 2013) was the first package to calculate pH reliably from any physically sensible pair of total alkalinity (AlkT) and dissolved inorganic carbon (CT) data and to do so in an autonomous and efficient way. Here, we extend it to use CO2, HCO3 or CO3 instead of CT. For each one of these pairs, the new SolveSAPHE calculates all of the possible pH values (0, 1, or 2), again without any prior knowledge of the solutions.
Guy Munhoven
Geosci. Model Dev., 14, 3603–3631, https://doi.org/10.5194/gmd-14-3603-2021, https://doi.org/10.5194/gmd-14-3603-2021, 2021
Short summary
Short summary
Sea-floor sediments play an important role in biogeochemical cycling of elements (e.g. carbon, silicon, nutrients) in the ocean. Realistic sediment modules are, however, not yet commonly used in global ocean biogeochemical models. Here we present MEDUSA, a model of the processes taking place in the surface sea-floor sediments which control the interaction between the sediments and the ocean. MEDUSA can be configured to meet the exact needs of any given ocean biogeochemical model.
Takasumi Kurahashi-Nakamura, André Paul, Guy Munhoven, Ute Merkel, and Michael Schulz
Geosci. Model Dev., 13, 825–840, https://doi.org/10.5194/gmd-13-825-2020, https://doi.org/10.5194/gmd-13-825-2020, 2020
Short summary
Short summary
Chemical processes in ocean-floor sediments have a large influence on the marine carbon cycle, hence the global climate, at long timescales. We developed a new coupling scheme for a chemical sediment model and a comprehensive climate model. The new coupled model outperformed the original uncoupled climate model in reproducing the global distribution of sediment properties. The sediment model will also act as a
bridgebetween the ocean model and paleoceanographic data.
Thomas Kleinen, Victor Brovkin, and Guy Munhoven
Clim. Past, 12, 2145–2160, https://doi.org/10.5194/cp-12-2145-2016, https://doi.org/10.5194/cp-12-2145-2016, 2016
Short summary
Short summary
We investigate trends in atmospheric CO2 during three recent interglacials – the Holocene, the Eemian and MIS 11 – using an earth system model of intermediate complexity. Our model experiments show a considerable improvement in the modelled CO2 trends for all three interglacials if peat accumulation and shallow water CaCO3 sedimentation are included, forcing the model only with orbital and sea level changes. The Holocene CO2 trend requires anthropogenic emissions of CO2 only after 3 ka BP.
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We introduce SolFinder 1.0, a decision-making tool to select trade-offs between different objective functions for optimal aircraft trajectories, including fuel use, flight time, NOx emissions, contrail distance, and climate impact. The module is included in the AirTraf 3.0 submodel and uses weather conditions simulated by the EMAC atmospheric model. This paper focuses on the ability of SolFinder to identify eco-efficient trajectories, reducing a flight's climate impact at limited cost penalties.
Ali Dashti, Jens C. Grimmer, Christophe Geuzaine, Florian Bauer, and Thomas Kohl
Geosci. Model Dev., 17, 3467–3485, https://doi.org/10.5194/gmd-17-3467-2024, https://doi.org/10.5194/gmd-17-3467-2024, 2024
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This study developed new meshing workflows to enable the automatic generation of meshes that follow geological models. The workflow allows for importing several geological models as input for Gmsh and later exporting the same number of high-quality meshes. This way, geological uncertainty is directly included in the numerical simulations. This study evaluates the impact of the geological uncertainty on thermohydraulic performance of two reservoirs for high-temperature heat storage applications.
Wangbin Shen, Zhaohui Lin, Zhengkun Qin, and Juan Li
Geosci. Model Dev., 17, 3447–3465, https://doi.org/10.5194/gmd-17-3447-2024, https://doi.org/10.5194/gmd-17-3447-2024, 2024
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In this study, a land surface image assimilation system capable of optimizing the spatial structure of the background field is constructed by introducing the curvelet analysis method and taking the similarity of image structure as a weak constraint. The findings demonstrate that the assimilation of surface soil moisture observation images effectively and reasonably enhances the spatial structure of soil moisture analysis field.
Luan Carlos de Sena Monteiro Ozelim, Michéle Dal Toé Casagrande, and André Luís Brasil Cavalcante
Geosci. Model Dev., 17, 3175–3197, https://doi.org/10.5194/gmd-17-3175-2024, https://doi.org/10.5194/gmd-17-3175-2024, 2024
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The paper addresses synthetic dataset challenges in nonlinear constitutive modeling of soils, providing two datasets: one with 2000 soil types, 40 test conditions each (160 000 triaxial tests), and a second with 2048 soil types, 42 test conditions each (172 032 triaxial tests). Each dataset is a 4000×10 matrix applicable for multivariate forecasting and geotechnical simulations. In addition, a new Python code is introduced, empowering researchers to leverage Python packages for NorSand analyses.
Daniel Giles, Matthew M. Graham, Mosè Giordano, Tuomas Koskela, Alexandros Beskos, and Serge Guillas
Geosci. Model Dev., 17, 2427–2445, https://doi.org/10.5194/gmd-17-2427-2024, https://doi.org/10.5194/gmd-17-2427-2024, 2024
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Digital twins of physical and human systems informed by real-time data are becoming ubiquitous across a wide range of settings. Progress for researchers is currently limited by a lack of tools to run these models effectively and efficiently. A key challenge is the optimal use of high-performance computing environments. The work presented here focuses on a developed open-source software platform which aims to improve this usage, with an emphasis placed on flexibility, efficiency, and scalability.
Stefan J. Miller, Paul A. Makar, and Colin J. Lee
Geosci. Model Dev., 17, 2197–2219, https://doi.org/10.5194/gmd-17-2197-2024, https://doi.org/10.5194/gmd-17-2197-2024, 2024
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This work outlines a new solver written in Fortran to calculate the partitioning of metastable aerosols at thermodynamic equilibrium based on the forward algorithms of ISORROPIA II. The new code includes numerical improvements that decrease the computational speed (compared to ISORROPIA II) while improving the accuracy of the partitioning solution.
Fernanda Alvarado-Neves, Laurent Ailleres, Lachlan Grose, Alexander R. Cruden, and Robin Armit
Geosci. Model Dev., 17, 1975–1993, https://doi.org/10.5194/gmd-17-1975-2024, https://doi.org/10.5194/gmd-17-1975-2024, 2024
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Previous work has demonstrated that adding geological knowledge to modelling methods creates more accurate and reliable models. Following this reasoning, we added constraints from magma emplacement mechanisms into existing modelling frameworks to improve the 3D characterisation of igneous intrusions. We tested the method on synthetic and real-world case studies, and the results show that our method can reproduce intrusion morphologies with no manual processing and using realistic datasets.
André R. Brodtkorb, Anna Benedictow, Heiko Klein, Arve Kylling, Agnes Nyiri, Alvaro Valdebenito, Espen Sollum, and Nina Kristiansen
Geosci. Model Dev., 17, 1957–1974, https://doi.org/10.5194/gmd-17-1957-2024, https://doi.org/10.5194/gmd-17-1957-2024, 2024
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It is vital to know the extent and concentration of volcanic ash in the atmosphere during a volcanic eruption. Whilst satellite imagery may give an estimate of the ash right now (assuming no cloud coverage), we also need to know where it will be in the coming hours. This paper presents a method for estimating parameters for a volcanic eruption based on satellite observations of ash in the atmosphere. The software package is open source and applicable to similar inversion scenarios.
Kees Nederhoff, Maarten van Ormondt, Jay Veeramony, Ap van Dongeren, José Antonio Álvarez Antolínez, Tim Leijnse, and Dano Roelvink
Geosci. Model Dev., 17, 1789–1811, https://doi.org/10.5194/gmd-17-1789-2024, https://doi.org/10.5194/gmd-17-1789-2024, 2024
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Forecasting tropical cyclones and their flooding impact is challenging. Our research introduces the Tropical Cyclone Forecasting Framework (TC-FF), enhancing cyclone predictions despite uncertainties. TC-FF generates global wind and flood scenarios, valuable even in data-limited regions. Applied to cases like Cyclone Idai, it showcases potential in bettering disaster preparation, marking progress in handling cyclone threats.
Younghun Kang and Ethan J. Kubatko
Geosci. Model Dev., 17, 1603–1625, https://doi.org/10.5194/gmd-17-1603-2024, https://doi.org/10.5194/gmd-17-1603-2024, 2024
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Models used to simulate the flow of coastal and riverine waters, including flooding, require a geometric representation (or mesh) of geographic features that exhibit a range of disparate spatial scales from large, open waters to small, narrow channels. Representing these features in an accurate way without excessive computational overhead presents a challenge. Here, we develop an automatic mesh generation tool to help address this challenge. Our results demonstrate the efficacy of our approach.
Hui Wan, Kai Zhang, Christopher J. Vogl, Carol S. Woodward, Richard C. Easter, Philip J. Rasch, Yan Feng, and Hailong Wang
Geosci. Model Dev., 17, 1387–1407, https://doi.org/10.5194/gmd-17-1387-2024, https://doi.org/10.5194/gmd-17-1387-2024, 2024
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Sophisticated numerical models of the Earth's atmosphere include representations of many physical and chemical processes. In numerical simulations, these processes need to be calculated in a certain sequence. This study reveals the weaknesses of the sequence of calculations used for aerosol processes in a global atmosphere model. A revision of the sequence is proposed and its impacts on the simulated global aerosol climatology are evaluated.
Christopher J. Vogl, Hui Wan, Carol S. Woodward, and Quan M. Bui
Geosci. Model Dev., 17, 1409–1428, https://doi.org/10.5194/gmd-17-1409-2024, https://doi.org/10.5194/gmd-17-1409-2024, 2024
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Generally speaking, accurate climate simulation requires an accurate evolution of the underlying mathematical equations on large computers. The equations are typically formulated and evolved in process groups. Process coupling refers to how the evolution of each group is combined with that of other groups to evolve the full set of equations for the whole atmosphere. This work presents a mathematical framework to evaluate methods without the need to first implement the methods.
Tom Keel, Chris Brierley, and Tamsin Edwards
Geosci. Model Dev., 17, 1229–1247, https://doi.org/10.5194/gmd-17-1229-2024, https://doi.org/10.5194/gmd-17-1229-2024, 2024
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Jet streams are an important control on surface weather as their speed and shape can modify the properties of weather systems. Establishing trends in the operation of jet streams may provide some indication of the future of weather in a warming world. Despite this, it has not been easy to establish trends, as many methods have been used to characterise them in data. We introduce a tool containing various implementations of jet stream statistics and algorithms that works in a standardised manner.
Amir Golparvar, Matthias Kästner, and Martin Thullner
Geosci. Model Dev., 17, 881–898, https://doi.org/10.5194/gmd-17-881-2024, https://doi.org/10.5194/gmd-17-881-2024, 2024
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Coupled reaction transport modelling is an established and beneficial method for studying natural and synthetic porous material, with applications ranging from industrial processes to natural decompositions in terrestrial environments. Up to now, a framework that explicitly considers the porous structure (e.g. from µ-CT images) for modelling the transport of reactive species is missing. We presented a model that overcomes this limitation and represents a novel numerical simulation toolbox.
Stefan Hergarten
Geosci. Model Dev., 17, 781–794, https://doi.org/10.5194/gmd-17-781-2024, https://doi.org/10.5194/gmd-17-781-2024, 2024
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The Voellmy rheology has been widely used for simulating snow and rock avalanches. Recently, a modified version of this rheology was proposed, which turned out to be able to predict the observed long runout of large rock avalanches theoretically. The software MinVoellmy presented here is the first numerical implementation of the modified rheology. It consists of MATLAB and Python classes, where simplicity and parsimony were the design goals.
Arjun Babu Nellikkattil, Danielle Lemmon, Travis Allen O'Brien, June-Yi Lee, and Jung-Eun Chu
Geosci. Model Dev., 17, 301–320, https://doi.org/10.5194/gmd-17-301-2024, https://doi.org/10.5194/gmd-17-301-2024, 2024
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This study introduces a new computational framework called Scalable Feature Extraction and Tracking (SCAFET), designed to extract and track features in climate data. SCAFET stands out by using innovative shape-based metrics to identify features without relying on preconceived assumptions about the climate model or mean state. This approach allows more accurate comparisons between different models and scenarios.
Mohammad Mortezazadeh, Jean-François Cossette, Ashu Dastoor, Jean de Grandpré, Irena Ivanova, and Abdessamad Qaddouri
Geosci. Model Dev., 17, 335–346, https://doi.org/10.5194/gmd-17-335-2024, https://doi.org/10.5194/gmd-17-335-2024, 2024
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The interpolation process is the most computationally expensive step of the semi-Lagrangian (SL) approach. In this paper we implement a new interpolation scheme into the semi-Lagrangian approach which has the same computational cost as a third-order polynomial scheme but with the accuracy of a fourth-order interpolation scheme. This improvement is achieved by using two third-order backward and forward polynomial interpolation schemes in two consecutive time steps.
Boris Gailleton, Luca C. Malatesta, Guillaume Cordonnier, and Jean Braun
Geosci. Model Dev., 17, 71–90, https://doi.org/10.5194/gmd-17-71-2024, https://doi.org/10.5194/gmd-17-71-2024, 2024
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This contribution presents a new method to numerically explore the evolution of mountain ranges and surrounding areas. The method helps in monitoring with details on the timing and travel path of material eroded from the mountain ranges. It is particularly well suited to studies juxtaposing different domains – lakes or multiple rock types, for example – and enables the combination of different processes.
Denise Degen, Daniel Caviedes Voullième, Susanne Buiter, Harrie-Jan Hendricks Franssen, Harry Vereecken, Ana González-Nicolás, and Florian Wellmann
Geosci. Model Dev., 16, 7375–7409, https://doi.org/10.5194/gmd-16-7375-2023, https://doi.org/10.5194/gmd-16-7375-2023, 2023
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In geosciences, we often use simulations based on physical laws. These simulations can be computationally expensive, which is a problem if simulations must be performed many times (e.g., to add error bounds). We show how a novel machine learning method helps to reduce simulation time. In comparison to other approaches, which typically only look at the output of a simulation, the method considers physical laws in the simulation itself. The method provides reliable results faster than standard.
Carlos Spa, Otilio Rojas, and Josep de la Puente
Geosci. Model Dev., 16, 7237–7252, https://doi.org/10.5194/gmd-16-7237-2023, https://doi.org/10.5194/gmd-16-7237-2023, 2023
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This paper develops a calibration methodology of all absorbing techniques typically used by Fourier pseudo-spectral time-domain (PSTD) methods for geoacoustic wave simulations. The main contributions of the paper are (a) an implementation and quantitative comparison of all absorbing techniques available for PSTD methods through a simple and robust numerical experiment, and (b) a validation of these absorbing techniques in several 3-D seismic scenarios with gradual heterogeneity complexities.
Michael Hillier, Florian Wellmann, Eric A. de Kemp, Boyan Brodaric, Ernst Schetselaar, and Karine Bédard
Geosci. Model Dev., 16, 6987–7012, https://doi.org/10.5194/gmd-16-6987-2023, https://doi.org/10.5194/gmd-16-6987-2023, 2023
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Neural networks can be used effectively to model three-dimensional geological structures from point data, sampling geological interfaces, units, and structural orientations. Existing neural network approaches for this type of modelling are advanced by the efficient incorporation of unconformities, new knowledge inputs, and improved data fitting techniques. These advances permit the modelling of more complex geology in diverse geological settings, different-sized areas, and various data regimes.
Ane Lopez de Gamiz-Zearra, Cecilie Hansen, Xavier Corrales, Iñaki Quincoces, Izaskun Preciado, and Eider Andonegi
EGUsphere, https://doi.org/10.5194/egusphere-2023-1368, https://doi.org/10.5194/egusphere-2023-1368, 2023
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This paper describes the development of the first calibrated end-to-end Atlantis model for the Bay of Biscay that will help us improve the comprehension of the spatial functioning of the Bay of Biscay ecosystem and help establishing management measures of human activities. Our results highlighted the importance of lower trophic levels to the pelagic system and demonstrate the importance of having accurate and precise data for biological processes.
Tor Nordam, Ruben Kristiansen, Raymond Nepstad, Erik van Sebille, and Andy M. Booth
Geosci. Model Dev., 16, 5339–5363, https://doi.org/10.5194/gmd-16-5339-2023, https://doi.org/10.5194/gmd-16-5339-2023, 2023
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We describe and compare two common methods, Eulerian and Lagrangian models, used to simulate the vertical transport of material in the ocean. They both solve the same transport problems but use different approaches for representing the underlying equations on the computer. The main focus of our study is on the numerical accuracy of the two approaches. Our results should be useful for other researchers creating or using these types of transport models.
Mathieu Gravey and Grégoire Mariethoz
Geosci. Model Dev., 16, 5265–5279, https://doi.org/10.5194/gmd-16-5265-2023, https://doi.org/10.5194/gmd-16-5265-2023, 2023
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Multiple‐point geostatistics are widely used to simulate complex spatial structures based on a training image. The use of these methods relies on the possibility of finding optimal training images and parametrization of the simulation algorithms. Here, we propose finding an optimal set of parameters using only the training image as input. The main advantage of our approach is to remove the risk of overfitting an objective function.
Siting Li, Ping Wang, Hong Wang, Yue Peng, Zhaodong Liu, Wenjie Zhang, Hongli Liu, Yaqiang Wang, Huizheng Che, and Xiaoye Zhang
Geosci. Model Dev., 16, 4171–4191, https://doi.org/10.5194/gmd-16-4171-2023, https://doi.org/10.5194/gmd-16-4171-2023, 2023
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Optimizing the initial state of atmospheric chemistry model input is one of the most essential methods to improve forecast accuracy. Considering the large computational load of the model, we introduce an ensemble optimal interpolation scheme (EnOI) for operational use and efficient updating of the initial fields of chemical components. The results suggest that EnOI provides a practical and cost-effective technique for improving the accuracy of chemical weather numerical forecasts.
Thomas Richter, Véronique Dansereau, Christian Lessig, and Piotr Minakowski
Geosci. Model Dev., 16, 3907–3926, https://doi.org/10.5194/gmd-16-3907-2023, https://doi.org/10.5194/gmd-16-3907-2023, 2023
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Sea ice covers not only the pole regions but affects the weather and climate globally. For example, its white surface reflects more sunlight than land. The oceans around the poles are therefore kept cool, which affects the circulation in the oceans worldwide. Simulating the behavior and changes in sea ice on a computer is, however, very difficult. We propose a new computer simulation that better models how cracks in the ice change over time and show this by comparing to other simulations.
Emma J. MacKie, Michael Field, Lijing Wang, Zhen Yin, Nathan Schoedl, Matthew Hibbs, and Allan Zhang
Geosci. Model Dev., 16, 3765–3783, https://doi.org/10.5194/gmd-16-3765-2023, https://doi.org/10.5194/gmd-16-3765-2023, 2023
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Earth scientists often have to fill in spatial gaps in measurements. This gap-filling or interpolation can be accomplished with geostatistical methods, where the statistical relationships between measurements are used to inform how these gaps should be filled. Despite the broad utility of these methods, there are few freely available geostatistical software applications. We present GStatSim, a Python package for performing different geostatistical interpolation methods.
Ian Madden, Simone Marras, and Jenny Suckale
Geosci. Model Dev., 16, 3479–3500, https://doi.org/10.5194/gmd-16-3479-2023, https://doi.org/10.5194/gmd-16-3479-2023, 2023
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To aid risk managers who may wish to rapidly assess tsunami risk but may lack high-performance computing infrastructure, we provide an accessible software package able to rapidly model tsunami inundation over real topography by leveraging Google's Tensor Processing Unit, a high-performance hardware. Minimally trained users can take advantage of the rapid modeling abilities provided by this package via a web browser thanks to the ease of use of Google Cloud Platform.
Youtong Rong, Paul Bates, and Jeffrey Neal
Geosci. Model Dev., 16, 3291–3311, https://doi.org/10.5194/gmd-16-3291-2023, https://doi.org/10.5194/gmd-16-3291-2023, 2023
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A novel subgrid channel (SGC) model is developed for river–floodplain modelling, allowing utilization of subgrid-scale bathymetric information while performing computations on relatively coarse grids. By including adaptive artificial diffusion, potential numerical instability, which the original SGC solver had, in low-friction regions such as urban areas is addressed. Evaluation of the new SGC model through structured tests confirmed that the accuracy and stability have improved.
Xiaqiong Zhou and Hann-Ming Henry Juang
Geosci. Model Dev., 16, 3263–3274, https://doi.org/10.5194/gmd-16-3263-2023, https://doi.org/10.5194/gmd-16-3263-2023, 2023
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The National Centers for Environmental Prediction Global Forecast System version 16 experienced model instability failures in real-time runs resolved by increasing the minimum thickness depth parameter. Further investigation revealed that the issue was caused by the advection of geopotential heights at the model's layer interfaces. By replacing high-order boundary conditions with zero-gradient boundary conditions for interface-wind reconstruction, the instability was effectively addressed.
Grant T. Euen, Shangxin Liu, Rene Gassmöller, Timo Heister, and Scott D. King
Geosci. Model Dev., 16, 3221–3239, https://doi.org/10.5194/gmd-16-3221-2023, https://doi.org/10.5194/gmd-16-3221-2023, 2023
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Due to the increasing availability of high-performance computing over the past few decades, numerical models have become an important tool for research. Here we test two geodynamic codes that produce such models: ASPECT, a newer code, and CitcomS, an older one. We show that they produce solutions that are extremely close. As methods and codes become more complex over time, showing reproducibility allows us to seamlessly link previously known information to modern methodologies.
Mohammad Kazem Sharifian, Georges Kesserwani, Alovya Ahmed Chowdhury, Jeffrey Neal, and Paul Bates
Geosci. Model Dev., 16, 2391–2413, https://doi.org/10.5194/gmd-16-2391-2023, https://doi.org/10.5194/gmd-16-2391-2023, 2023
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This paper describes a new release of the LISFLOOD-FP model for fast and efficient flood simulations. It features a new non-uniform grid generator that uses multiwavelet analyses to sensibly coarsens the resolutions where the local topographic variations are smooth. Moreover, the model is parallelised on the graphical processing units (GPUs) to further boost computational efficiency. The performance of the model is assessed for five real-world case studies, noting its potential applications.
Bruno K. Zürcher
Geosci. Model Dev., 16, 1697–1711, https://doi.org/10.5194/gmd-16-1697-2023, https://doi.org/10.5194/gmd-16-1697-2023, 2023
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We present a novel algorithm to efficiently compute Barnes interpolation, which is a method for transforming data values recorded at irregularly spaced points into a corresponding regular grid. In contrast to naive implementations with an algorithmic complexity that depends on the product of the number of sample points and the number of grid points, our approach reduces this dependency to their sum.
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