Articles | Volume 16, issue 14
https://doi.org/10.5194/gmd-16-4017-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-16-4017-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Development and technical paper
| 
17 Jul 2023
Development and technical paper |
| 17 Jul 2023
| 17 Jul 2023
A machine learning approach targeting parameter estimation for plant functional type coexistence modeling using ELM-FATES (v2.0)
Atmospheric Sciences and Global Change Division, Pacific Northwest National
Laboratory, Richland, WA, USA
Yilin Fang
Earth System and Science Division, Pacific Northwest National Laboratory,
Richland, WA, USA
Zhonghua Zheng
Department of Earth and Environmental Sciences, The University of
Manchester, Manchester, UK
Mingjie Shi
Atmospheric Sciences and Global Change Division, Pacific Northwest National
Laboratory, Richland, WA, USA
Marcos Longo
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, CA, USA
Charles D. Koven
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, CA, USA
Jennifer A. Holm
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, CA, USA
Rosie A. Fisher
CICERO Center for International Climate and Environmental Research, Oslo,
Norway
Nate G. McDowell
Atmospheric Sciences and Global Change Division, Pacific Northwest National
Laboratory, Richland, WA, USA
School of Biological Sciences, Washington State University, P.O. Box 644236,
Pullman, WA, USA
Jeffrey Chambers
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, CA, USA
L. Ruby Leung
Atmospheric Sciences and Global Change Division, Pacific Northwest National
Laboratory, Richland, WA, USA
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Unprecedented climate extremes (UCEs) are expected to have dramatic impacts on ecosystems. We present a road map of how dynamic vegetation models can explore extreme drought and climate change and assess ecological processes to measure and reduce model uncertainties. The models predict strong nonlinear responses to UCEs. Due to different model representations, the models differ in magnitude and trajectory of forest loss. Therefore, we explore specific plant responses that reflect knowledge gaps.
Koichi Sakaguchi, L. Ruby Leung, Colin M. Zarzycki, Jihyeon Jang, Seth McGinnis, Bryce E. Harrop, William C. Skamarock, Andrew Gettelman, Chun Zhao, William J. Gutowski, Stephen Leak, and Linda Mearns
Geosci. Model Dev., 16, 3029–3081, https://doi.org/10.5194/gmd-16-3029-2023, https://doi.org/10.5194/gmd-16-3029-2023, 2023
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We document details of the regional climate downscaling dataset produced by a global variable-resolution model. The experiment is unique in that it follows a standard protocol designed for coordinated experiments of regional models. We found negligible influence of post-processing on statistical analysis, importance of simulation quality outside of the target region, and computational challenges that our model code faced due to rapidly changing super computer systems.
Zhe Feng, Joseph Hardin, Hannah C. Barnes, Jianfeng Li, L. Ruby Leung, Adam Varble, and Zhixiao Zhang
Geosci. Model Dev., 16, 2753–2776, https://doi.org/10.5194/gmd-16-2753-2023, https://doi.org/10.5194/gmd-16-2753-2023, 2023
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PyFLEXTRKR is a flexible atmospheric feature tracking framework with specific capabilities to track convective clouds from a variety of observations and model simulations. The package has a collection of multi-object identification algorithms and has been optimized for large datasets. This paper describes the algorithms and demonstrates applications for tracking deep convective cells and mesoscale convective systems from observations and model simulations at a wide range of scales.
Zeyu Xue, Paul Ullrich, and Lai-Yung Ruby Leung
Hydrol. Earth Syst. Sci., 27, 1909–1927, https://doi.org/10.5194/hess-27-1909-2023, https://doi.org/10.5194/hess-27-1909-2023, 2023
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We examine the sensitivity and robustness of conclusions drawn from the PGW method over the NEUS by conducting multiple PGW experiments and varying the perturbation spatial scales and choice of perturbed meteorological variables to provide a guideline for this increasingly popular regional modeling method. Overall, we recommend PGW experiments be performed with perturbations to temperature or the combination of temperature and wind at the gridpoint scale, depending on the research question.
Dalei Hao, Gautam Bisht, Karl Rittger, Timbo Stillinger, Edward Bair, Yu Gu, and L. Ruby Leung
The Cryosphere, 17, 673–697, https://doi.org/10.5194/tc-17-673-2023, https://doi.org/10.5194/tc-17-673-2023, 2023
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We comprehensively evaluated the snow simulations in E3SM land model over the western United States in terms of spatial patterns, temporal correlations, interannual variabilities, elevation gradients, and change with forest cover of snow properties and snow phenology. Our study underscores the need for diagnosing model biases and improving the model representations of snow properties and snow phenology in mountainous areas for more credible simulation and future projection of mountain snowpack.
Chandan Sarangi, Yun Qian, L. Ruby Leung, Yang Zhang, Yufei Zou, and Yuhang Wang
Atmos. Chem. Phys., 23, 1769–1783, https://doi.org/10.5194/acp-23-1769-2023, https://doi.org/10.5194/acp-23-1769-2023, 2023
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We show that for air quality, the densely populated eastern US may see even larger impacts of wildfires due to long-distance smoke transport and associated positive climatic impacts, partially compensating the improvements from regulations on anthropogenic emissions. This study highlights the tension between natural and anthropogenic contributions and the non-local nature of air pollution that complicate regulatory strategies for improving future regional air quality for human health.
Dalei Hao, Gautam Bisht, Karl Rittger, Edward Bair, Cenlin He, Huilin Huang, Cheng Dang, Timbo Stillinger, Yu Gu, Hailong Wang, Yun Qian, and L. Ruby Leung
Geosci. Model Dev., 16, 75–94, https://doi.org/10.5194/gmd-16-75-2023, https://doi.org/10.5194/gmd-16-75-2023, 2023
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Snow with the highest albedo of land surface plays a vital role in Earth’s surface energy budget and water cycle. This study accounts for the impacts of snow grain shape and mixing state of light-absorbing particles with snow on snow albedo in the E3SM land model. The findings advance our understanding of the role of snow grain shape and mixing state of LAP–snow in land surface processes and offer guidance for improving snow simulations and radiative forcing estimates in Earth system models.
Marius S. A. Lambert, Hui Tang, Kjetil S. Aas, Frode Stordal, Rosie A. Fisher, Yilin Fang, Junyan Ding, and Frans-Jan W. Parmentier
Geosci. Model Dev., 15, 8809–8829, https://doi.org/10.5194/gmd-15-8809-2022, https://doi.org/10.5194/gmd-15-8809-2022, 2022
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In this study, we implement a hardening mortality scheme into CTSM5.0-FATES-Hydro and evaluate how it impacts plant hydraulics and vegetation growth. Our work shows that the hydraulic modifications prescribed by the hardening scheme are necessary to model realistic vegetation growth in cold climates, in contrast to the default model that simulates almost nonexistent and declining vegetation due to abnormally large water loss through the roots.
Dongyu Feng, Zeli Tan, Darren Engwirda, Chang Liao, Donghui Xu, Gautam Bisht, Tian Zhou, Hong-Yi Li, and L. Ruby Leung
Hydrol. Earth Syst. Sci., 26, 5473–5491, https://doi.org/10.5194/hess-26-5473-2022, https://doi.org/10.5194/hess-26-5473-2022, 2022
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Sea level rise, storm surge and river discharge can cause coastal backwater effects in downstream sections of rivers, creating critical flood risks. This study simulates the backwater effects using a large-scale river model on a coastal-refined computational mesh. By decomposing the backwater drivers, we revealed their relative importance and long-term variations. Our analysis highlights the increasing strength of backwater effects due to sea level rise and more frequent storm surge.
Yilin Fang, L. Ruby Leung, Charles D. Koven, Gautam Bisht, Matteo Detto, Yanyan Cheng, Nate McDowell, Helene Muller-Landau, S. Joseph Wright, and Jeffrey Q. Chambers
Geosci. Model Dev., 15, 7879–7901, https://doi.org/10.5194/gmd-15-7879-2022, https://doi.org/10.5194/gmd-15-7879-2022, 2022
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We develop a model that integrates an Earth system model with a three-dimensional hydrology model to explicitly resolve hillslope topography and water flow underneath the land surface to understand how local-scale hydrologic processes modulate vegetation along water availability gradients. Our coupled model can be used to improve the understanding of the diverse impact of local heterogeneity and water flux on nutrient availability and plant communities.
Meng Huang, Po-Lun Ma, Nathaniel W. Chaney, Dalei Hao, Gautam Bisht, Megan D. Fowler, Vincent E. Larson, and L. Ruby Leung
Geosci. Model Dev., 15, 6371–6384, https://doi.org/10.5194/gmd-15-6371-2022, https://doi.org/10.5194/gmd-15-6371-2022, 2022
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The land surface in one grid cell may be diverse in character. This study uses an explicit way to account for that subgrid diversity in a state-of-the-art Earth system model (ESM) and explores its implications for the overlying atmosphere. We find that the shallow clouds are increased significantly with the land surface diversity. Our work highlights the importance of accurately representing the land surface and its interaction with the atmosphere in next-generation ESMs.
Yilin Fang, L. Ruby Leung, Ryan Knox, Charlie Koven, and Ben Bond-Lamberty
Geosci. Model Dev., 15, 6385–6398, https://doi.org/10.5194/gmd-15-6385-2022, https://doi.org/10.5194/gmd-15-6385-2022, 2022
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Accounting for water movement in the soil and water transport within the plant is important for plant growth in Earth system modeling. We implemented different numerical approaches for a plant hydrodynamic model and compared their impacts on the simulated aboveground biomass (AGB) at single points and globally. We found care should be taken when discretizing the number of soil layers for numerical simulations as it can significantly affect AGB if accuracy and computational costs are of concern.
Sol Kim, L. Ruby Leung, Bin Guan, and John C. H. Chiang
Geosci. Model Dev., 15, 5461–5480, https://doi.org/10.5194/gmd-15-5461-2022, https://doi.org/10.5194/gmd-15-5461-2022, 2022
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The Energy Exascale Earth System Model (E3SM) project is a state-of-the-science Earth system model developed by the US Department of Energy (DOE). Understanding how the water cycle behaves in this model is of particular importance to the DOE’s mission. Atmospheric rivers (ARs) – which are crucial to the global water cycle – move vast amounts of water vapor through the sky and produce rain and snow. We find that this model reliably represents atmospheric rivers around the world.
Lingcheng Li, Gautam Bisht, and L. Ruby Leung
Geosci. Model Dev., 15, 5489–5510, https://doi.org/10.5194/gmd-15-5489-2022, https://doi.org/10.5194/gmd-15-5489-2022, 2022
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Land surface heterogeneity plays a critical role in the terrestrial water, energy, and biogeochemical cycles. Our study systematically quantified the effects of four dominant heterogeneity sources on water and energy partitioning via Sobol' indices. We found that atmospheric forcing and land use land cover are the most dominant heterogeneity sources in determining spatial variability of water and energy partitioning. Our findings can help prioritize the future development of land surface models.
Yu Yao, Jeffrey H. Curtis, Joseph Ching, Zhonghua Zheng, and Nicole Riemer
Atmos. Chem. Phys., 22, 9265–9282, https://doi.org/10.5194/acp-22-9265-2022, https://doi.org/10.5194/acp-22-9265-2022, 2022
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Investigating the impacts of aerosol mixing state on aerosol optical properties has a long history from both the modeling and experimental perspective. In this study, we used particle-resolved simulations as a benchmark to determine the error in optical properties when using simplified aerosol representations. We found that errors in single scattering albedo due to the internal mixture assumptions can have substantial effects on calculating aerosol direct radiative forcing.
Kai Zhang, Wentao Zhang, Hui Wan, Philip J. Rasch, Steven J. Ghan, Richard C. Easter, Xiangjun Shi, Yong Wang, Hailong Wang, Po-Lun Ma, Shixuan Zhang, Jian Sun, Susannah M. Burrows, Manish Shrivastava, Balwinder Singh, Yun Qian, Xiaohong Liu, Jean-Christophe Golaz, Qi Tang, Xue Zheng, Shaocheng Xie, Wuyin Lin, Yan Feng, Minghuai Wang, Jin-Ho Yoon, and L. Ruby Leung
Atmos. Chem. Phys., 22, 9129–9160, https://doi.org/10.5194/acp-22-9129-2022, https://doi.org/10.5194/acp-22-9129-2022, 2022
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Here we analyze the effective aerosol forcing simulated by E3SM version 1 using both century-long free-running and short nudged simulations. The aerosol forcing in E3SMv1 is relatively large compared to other models, mainly due to the large indirect aerosol effect. Aerosol-induced changes in liquid and ice cloud properties in E3SMv1 have a strong correlation. The aerosol forcing estimates in E3SMv1 are sensitive to the parameterization changes in both liquid and ice cloud processes.
Jiaying Zhang, Rafael L. Bras, Marcos Longo, and Tamara Heartsill Scalley
Geosci. Model Dev., 15, 5107–5126, https://doi.org/10.5194/gmd-15-5107-2022, https://doi.org/10.5194/gmd-15-5107-2022, 2022
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We implemented hurricane disturbance in a vegetation dynamics model and calibrated the model with observations of a tropical forest. We used the model to study forest recovery from hurricane disturbance and found that a single hurricane disturbance enhances AGB and BA in the long term compared with a no-hurricane situation. The model developed and results presented in this study can be utilized to understand the impact of hurricane disturbances on forest recovery under the changing climate.
Donghui Xu, Gautam Bisht, Khachik Sargsyan, Chang Liao, and L. Ruby Leung
Geosci. Model Dev., 15, 5021–5043, https://doi.org/10.5194/gmd-15-5021-2022, https://doi.org/10.5194/gmd-15-5021-2022, 2022
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The runoff outputs in Earth system model simulations involve high uncertainty, which needs to be constrained by parameter calibration. In this work, we used a surrogate-assisted Bayesian framework to efficiently calibrate the runoff-generation processes in the Energy Exascale Earth System Model v1 at a global scale. The model performance was improved compared to the default parameter after calibration, and the associated parametric uncertainty was significantly constrained.
Yun Lin, Jiwen Fan, Pengfei Li, Lai-yung Ruby Leung, Paul J. DeMott, Lexie Goldberger, Jennifer Comstock, Ying Liu, Jong-Hoon Jeong, and Jason Tomlinson
Atmos. Chem. Phys., 22, 6749–6771, https://doi.org/10.5194/acp-22-6749-2022, https://doi.org/10.5194/acp-22-6749-2022, 2022
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How sea spray aerosols may affect cloud and precipitation over the region by acting as ice-nucleating particles (INPs) is unknown. We explored the effects of INPs from marine aerosols on orographic cloud and precipitation for an atmospheric river event observed during the 2015 ACAPEX field campaign. The marine INPs enhance the formation of ice and snow, leading to less shallow warm clouds but more mixed-phase and deep clouds. This work suggests models need to consider the impacts of marine INPs.
Charles D. Koven, Vivek K. Arora, Patricia Cadule, Rosie A. Fisher, Chris D. Jones, David M. Lawrence, Jared Lewis, Keith Lindsay, Sabine Mathesius, Malte Meinshausen, Michael Mills, Zebedee Nicholls, Benjamin M. Sanderson, Roland Séférian, Neil C. Swart, William R. Wieder, and Kirsten Zickfeld
Earth Syst. Dynam., 13, 885–909, https://doi.org/10.5194/esd-13-885-2022, https://doi.org/10.5194/esd-13-885-2022, 2022
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We explore the long-term dynamics of Earth's climate and carbon cycles under a pair of contrasting scenarios to the year 2300 using six models that include both climate and carbon cycle dynamics. One scenario assumes very high emissions, while the second assumes a peak in emissions, followed by rapid declines to net negative emissions. We show that the models generally agree that warming is roughly proportional to carbon emissions but that many other aspects of the model projections differ.
Pinya Wang, Yang Yang, Huimin Li, Lei Chen, Ruijun Dang, Daokai Xue, Baojie Li, Jianping Tang, L. Ruby Leung, and Hong Liao
Atmos. Chem. Phys., 22, 4705–4719, https://doi.org/10.5194/acp-22-4705-2022, https://doi.org/10.5194/acp-22-4705-2022, 2022
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China is now suffering from both severe ozone (O3) pollution and heat events. We highlight that North China Plain is the hot spot of the co-occurrences of extremes in O3 and high temperatures in China. Such coupled extremes exhibit an increasing trend during 2014–2019 and will continue to increase until the middle of this century. And the coupled extremes impose more severe health impacts to human than O3 pollution occurring alone because of elevated O3 levels and temperatures.
Po-Lun Ma, Bryce E. Harrop, Vincent E. Larson, Richard B. Neale, Andrew Gettelman, Hugh Morrison, Hailong Wang, Kai Zhang, Stephen A. Klein, Mark D. Zelinka, Yuying Zhang, Yun Qian, Jin-Ho Yoon, Christopher R. Jones, Meng Huang, Sheng-Lun Tai, Balwinder Singh, Peter A. Bogenschutz, Xue Zheng, Wuyin Lin, Johannes Quaas, Hélène Chepfer, Michael A. Brunke, Xubin Zeng, Johannes Mülmenstädt, Samson Hagos, Zhibo Zhang, Hua Song, Xiaohong Liu, Michael S. Pritchard, Hui Wan, Jingyu Wang, Qi Tang, Peter M. Caldwell, Jiwen Fan, Larry K. Berg, Jerome D. Fast, Mark A. Taylor, Jean-Christophe Golaz, Shaocheng Xie, Philip J. Rasch, and L. Ruby Leung
Geosci. Model Dev., 15, 2881–2916, https://doi.org/10.5194/gmd-15-2881-2022, https://doi.org/10.5194/gmd-15-2881-2022, 2022
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An alternative set of parameters for E3SM Atmospheric Model version 1 has been developed based on a tuning strategy that focuses on clouds. When clouds in every regime are improved, other aspects of the model are also improved, even though they are not the direct targets for calibration. The recalibrated model shows a lower sensitivity to anthropogenic aerosols and surface warming, suggesting potential improvements to the simulated climate in the past and future.
Yunxiang Chen, Jie Bao, Yilin Fang, William A. Perkins, Huiying Ren, Xuehang Song, Zhuoran Duan, Zhangshuan Hou, Xiaoliang He, and Timothy D. Scheibe
Geosci. Model Dev., 15, 2917–2947, https://doi.org/10.5194/gmd-15-2917-2022, https://doi.org/10.5194/gmd-15-2917-2022, 2022
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Climate change affects river discharge variations that alter streamflow. By integrating multi-type survey data with a computational fluid dynamics tool, OpenFOAM, we show a workflow that enables accurate and efficient streamflow modeling at 30 km and 5-year scales. The model accuracy for water stage and depth average velocity is −16–9 cm and 0.71–0.83 in terms of mean error and correlation coefficients. This accuracy indicates the model's reliability for evaluating climate impact on rivers.
Elias C. Massoud, A. Anthony Bloom, Marcos Longo, John T. Reager, Paul A. Levine, and John R. Worden
Hydrol. Earth Syst. Sci., 26, 1407–1423, https://doi.org/10.5194/hess-26-1407-2022, https://doi.org/10.5194/hess-26-1407-2022, 2022
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The water balance on river basin scales depends on a number of soil physical processes. Gaining information on these quantities using observations is a key step toward improving the skill of land surface hydrology models. In this study, we use data from the Gravity Recovery and Climate Experiment (NASA-GRACE) to inform and constrain these hydrologic processes. We show that our model is able to simulate the land hydrologic cycle for a watershed in the Amazon from January 2003 to December 2012.
Sally S.-C. Wang, Yun Qian, L. Ruby Leung, and Yang Zhang
Atmos. Chem. Phys., 22, 3445–3468, https://doi.org/10.5194/acp-22-3445-2022, https://doi.org/10.5194/acp-22-3445-2022, 2022
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This study develops an interpretable machine learning (ML) model predicting monthly PM2.5 fire emission over the contiguous US at 0.25° resolution and compares the prediction skills of the ML and process-based models. The comparison facilitates attributions of model biases and better understanding of the strengths and uncertainties in the two types of models at regional scales, for informing future model development and their applications in fire emission projection.
Guta Wakbulcho Abeshu, Hong-Yi Li, Zhenduo Zhu, Zeli Tan, and L. Ruby Leung
Earth Syst. Sci. Data, 14, 929–942, https://doi.org/10.5194/essd-14-929-2022, https://doi.org/10.5194/essd-14-929-2022, 2022
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Existing riverbed sediment particle size data are sparsely available at individual sites. We develop a continuous map of median riverbed sediment particle size over the contiguous US corresponding to millions of river segments based on the existing observations and machine learning methods. This map is useful for research in large-scale river sediment using model- and data-driven approaches, teaching environmental and earth system sciences, planning and managing floodplain zones, etc.
Hong-Yi Li, Zeli Tan, Hongbo Ma, Zhenduo Zhu, Guta Wakbulcho Abeshu, Senlin Zhu, Sagy Cohen, Tian Zhou, Donghui Xu, and L. Ruby Leung
Hydrol. Earth Syst. Sci., 26, 665–688, https://doi.org/10.5194/hess-26-665-2022, https://doi.org/10.5194/hess-26-665-2022, 2022
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We introduce a new multi-process river sediment module for Earth system models. Application and validation over the contiguous US indicate a satisfactory model performance over large river systems, including those heavily regulated by reservoirs. This new sediment module enables future modeling of the transportation and transformation of carbon and nutrients carried by the fine sediment along the river–ocean continuum to close the global carbon and nutrient cycles.
Claudia Tebaldi, Kalyn Dorheim, Michael Wehner, and Ruby Leung
Earth Syst. Dynam., 12, 1427–1501, https://doi.org/10.5194/esd-12-1427-2021, https://doi.org/10.5194/esd-12-1427-2021, 2021
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We address the question of how large an initial condition ensemble of climate model simulations should be if we are concerned with accurately projecting future changes in temperature and precipitation extremes. We find that for most cases (and both models considered), an ensemble of 20–25 members is sufficient for many extreme metrics, spatial scales and time horizons. This may leave computational resources to tackle other uncertainties in climate model simulations with our ensembles.
Zhonghua Zheng, Matthew West, Lei Zhao, Po-Lun Ma, Xiaohong Liu, and Nicole Riemer
Atmos. Chem. Phys., 21, 17727–17741, https://doi.org/10.5194/acp-21-17727-2021, https://doi.org/10.5194/acp-21-17727-2021, 2021
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Aerosol mixing state is an important emergent property that affects aerosol radiative forcing and aerosol–cloud interactions, but it has not been easy to constrain this property globally. We present a framework for evaluating the error in aerosol mixing state induced by aerosol representation assumptions, which is one of the important contributors to structural uncertainty in aerosol models. Our study provides insights into potential improvements to model process representation for aerosols.
Dalei Hao, Gautam Bisht, Yu Gu, Wei-Liang Lee, Kuo-Nan Liou, and L. Ruby Leung
Geosci. Model Dev., 14, 6273–6289, https://doi.org/10.5194/gmd-14-6273-2021, https://doi.org/10.5194/gmd-14-6273-2021, 2021
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Topography exerts significant influence on the incoming solar radiation at the land surface. This study incorporated a well-validated sub-grid topographic parameterization in E3SM land model (ELM) version 1.0. The results demonstrate that sub-grid topography has non-negligible effects on surface energy budget, snow cover, and surface temperature over the Tibetan Plateau and that the ELM simulations are sensitive to season, elevation, and spatial scale.
Benjamin M. Sanderson, Angeline G. Pendergrass, Charles D. Koven, Florent Brient, Ben B. B. Booth, Rosie A. Fisher, and Reto Knutti
Earth Syst. Dynam., 12, 899–918, https://doi.org/10.5194/esd-12-899-2021, https://doi.org/10.5194/esd-12-899-2021, 2021
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Emergent constraints promise a pathway to the reduction in climate projection uncertainties by exploiting ensemble relationships between observable quantities and unknown climate response parameters. This study considers the robustness of these relationships in light of biases and common simplifications that may be present in the original ensemble of climate simulations. We propose a classification scheme for constraints and a number of practical case studies.
Polly C. Buotte, Charles D. Koven, Chonggang Xu, Jacquelyn K. Shuman, Michael L. Goulden, Samuel Levis, Jessica Katz, Junyan Ding, Wu Ma, Zachary Robbins, and Lara M. Kueppers
Biogeosciences, 18, 4473–4490, https://doi.org/10.5194/bg-18-4473-2021, https://doi.org/10.5194/bg-18-4473-2021, 2021
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We present an approach for ensuring the definitions of plant types in dynamic vegetation models are connected to the underlying ecological processes controlling community composition. Our approach can be applied regionally or globally. Robust resolution of community composition will allow us to use these models to address important questions related to future climate and management effects on plant community composition, structure, carbon storage, and feedbacks within the Earth system.
Yongkang Xue, Tandong Yao, Aaron A. Boone, Ismaila Diallo, Ye Liu, Xubin Zeng, William K. M. Lau, Shiori Sugimoto, Qi Tang, Xiaoduo Pan, Peter J. van Oevelen, Daniel Klocke, Myung-Seo Koo, Tomonori Sato, Zhaohui Lin, Yuhei Takaya, Constantin Ardilouze, Stefano Materia, Subodh K. Saha, Retish Senan, Tetsu Nakamura, Hailan Wang, Jing Yang, Hongliang Zhang, Mei Zhao, Xin-Zhong Liang, J. David Neelin, Frederic Vitart, Xin Li, Ping Zhao, Chunxiang Shi, Weidong Guo, Jianping Tang, Miao Yu, Yun Qian, Samuel S. P. Shen, Yang Zhang, Kun Yang, Ruby Leung, Yuan Qiu, Daniele Peano, Xin Qi, Yanling Zhan, Michael A. Brunke, Sin Chan Chou, Michael Ek, Tianyi Fan, Hong Guan, Hai Lin, Shunlin Liang, Helin Wei, Shaocheng Xie, Haoran Xu, Weiping Li, Xueli Shi, Paulo Nobre, Yan Pan, Yi Qin, Jeff Dozier, Craig R. Ferguson, Gianpaolo Balsamo, Qing Bao, Jinming Feng, Jinkyu Hong, Songyou Hong, Huilin Huang, Duoying Ji, Zhenming Ji, Shichang Kang, Yanluan Lin, Weiguang Liu, Ryan Muncaster, Patricia de Rosnay, Hiroshi G. Takahashi, Guiling Wang, Shuyu Wang, Weicai Wang, Xu Zhou, and Yuejian Zhu
Geosci. Model Dev., 14, 4465–4494, https://doi.org/10.5194/gmd-14-4465-2021, https://doi.org/10.5194/gmd-14-4465-2021, 2021
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The subseasonal prediction of extreme hydroclimate events such as droughts/floods has remained stubbornly low for years. This paper presents a new international initiative which, for the first time, introduces spring land surface temperature anomalies over high mountains to improve precipitation prediction through remote effects of land–atmosphere interactions. More than 40 institutions worldwide are participating in this effort. The experimental protocol and preliminary results are presented.
Wu Ma, Lu Zhai, Alexandria Pivovaroff, Jacquelyn Shuman, Polly Buotte, Junyan Ding, Bradley Christoffersen, Ryan Knox, Max Moritz, Rosie A. Fisher, Charles D. Koven, Lara Kueppers, and Chonggang Xu
Biogeosciences, 18, 4005–4020, https://doi.org/10.5194/bg-18-4005-2021, https://doi.org/10.5194/bg-18-4005-2021, 2021
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We use a hydrodynamic demographic vegetation model to estimate live fuel moisture dynamics of chaparral shrubs, a dominant vegetation type in fire-prone southern California. Our results suggest that multivariate climate change could cause a significant net reduction in live fuel moisture and thus exacerbate future wildfire danger in chaparral shrub systems.
Rafael Poyatos, Víctor Granda, Víctor Flo, Mark A. Adams, Balázs Adorján, David Aguadé, Marcos P. M. Aidar, Scott Allen, M. Susana Alvarado-Barrientos, Kristina J. Anderson-Teixeira, Luiza Maria Aparecido, M. Altaf Arain, Ismael Aranda, Heidi Asbjornsen, Robert Baxter, Eric Beamesderfer, Z. Carter Berry, Daniel Berveiller, Bethany Blakely, Johnny Boggs, Gil Bohrer, Paul V. Bolstad, Damien Bonal, Rosvel Bracho, Patricia Brito, Jason Brodeur, Fernando Casanoves, Jérôme Chave, Hui Chen, Cesar Cisneros, Kenneth Clark, Edoardo Cremonese, Hongzhong Dang, Jorge S. David, Teresa S. David, Nicolas Delpierre, Ankur R. Desai, Frederic C. Do, Michal Dohnal, Jean-Christophe Domec, Sebinasi Dzikiti, Colin Edgar, Rebekka Eichstaedt, Tarek S. El-Madany, Jan Elbers, Cleiton B. Eller, Eugénie S. Euskirchen, Brent Ewers, Patrick Fonti, Alicia Forner, David I. Forrester, Helber C. Freitas, Marta Galvagno, Omar Garcia-Tejera, Chandra Prasad Ghimire, Teresa E. Gimeno, John Grace, André Granier, Anne Griebel, Yan Guangyu, Mark B. Gush, Paul J. Hanson, Niles J. Hasselquist, Ingo Heinrich, Virginia Hernandez-Santana, Valentine Herrmann, Teemu Hölttä, Friso Holwerda, James Irvine, Supat Isarangkool Na Ayutthaya, Paul G. Jarvis, Hubert Jochheim, Carlos A. Joly, Julia Kaplick, Hyun Seok Kim, Leif Klemedtsson, Heather Kropp, Fredrik Lagergren, Patrick Lane, Petra Lang, Andrei Lapenas, Víctor Lechuga, Minsu Lee, Christoph Leuschner, Jean-Marc Limousin, Juan Carlos Linares, Maj-Lena Linderson, Anders Lindroth, Pilar Llorens, Álvaro López-Bernal, Michael M. Loranty, Dietmar Lüttschwager, Cate Macinnis-Ng, Isabelle Maréchaux, Timothy A. Martin, Ashley Matheny, Nate McDowell, Sean McMahon, Patrick Meir, Ilona Mészáros, Mirco Migliavacca, Patrick Mitchell, Meelis Mölder, Leonardo Montagnani, Georgianne W. Moore, Ryogo Nakada, Furong Niu, Rachael H. Nolan, Richard Norby, Kimberly Novick, Walter Oberhuber, Nikolaus Obojes, A. Christopher Oishi, Rafael S. Oliveira, Ram Oren, Jean-Marc Ourcival, Teemu Paljakka, Oscar Perez-Priego, Pablo L. Peri, Richard L. Peters, Sebastian Pfautsch, William T. Pockman, Yakir Preisler, Katherine Rascher, George Robinson, Humberto Rocha, Alain Rocheteau, Alexander Röll, Bruno H. P. Rosado, Lucy Rowland, Alexey V. Rubtsov, Santiago Sabaté, Yann Salmon, Roberto L. Salomón, Elisenda Sánchez-Costa, Karina V. R. Schäfer, Bernhard Schuldt, Alexandr Shashkin, Clément Stahl, Marko Stojanović, Juan Carlos Suárez, Ge Sun, Justyna Szatniewska, Fyodor Tatarinov, Miroslav Tesař, Frank M. Thomas, Pantana Tor-ngern, Josef Urban, Fernando Valladares, Christiaan van der Tol, Ilja van Meerveld, Andrej Varlagin, Holm Voigt, Jeffrey Warren, Christiane Werner, Willy Werner, Gerhard Wieser, Lisa Wingate, Stan Wullschleger, Koong Yi, Roman Zweifel, Kathy Steppe, Maurizio Mencuccini, and Jordi Martínez-Vilalta
Earth Syst. Sci. Data, 13, 2607–2649, https://doi.org/10.5194/essd-13-2607-2021, https://doi.org/10.5194/essd-13-2607-2021, 2021
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Transpiration is a key component of global water balance, but it is poorly constrained from available observations. We present SAPFLUXNET, the first global database of tree-level transpiration from sap flow measurements, containing 202 datasets and covering a wide range of ecological conditions. SAPFLUXNET and its accompanying R software package
sapfluxnetrwill facilitate new data syntheses on the ecological factors driving water use and drought responses of trees and forests.
Jianfeng Li, Zhe Feng, Yun Qian, and L. Ruby Leung
Earth Syst. Sci. Data, 13, 827–856, https://doi.org/10.5194/essd-13-827-2021, https://doi.org/10.5194/essd-13-827-2021, 2021
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Deep convection has different properties at different scales. We develop a 4 km h−1 observational data product of mesoscale convective systems and isolated deep convection in the United States from 2004–2017. We find that both types of convective systems contribute significantly to precipitation east of the Rocky Mountains but with distinct spatiotemporal characteristics. The data product will be useful for observational analyses and model evaluations of convection events at different scales.
Robinson I. Negrón-Juárez, Jennifer A. Holm, Boris Faybishenko, Daniel Magnabosco-Marra, Rosie A. Fisher, Jacquelyn K. Shuman, Alessandro C. de Araujo, William J. Riley, and Jeffrey Q. Chambers
Biogeosciences, 17, 6185–6205, https://doi.org/10.5194/bg-17-6185-2020, https://doi.org/10.5194/bg-17-6185-2020, 2020
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The temporal variability in the Landsat satellite near-infrared (NIR) band captured the dynamics of forest regrowth after disturbances in Central Amazon. This variability was represented by the dynamics of forest regrowth after disturbances were properly represented by the ELM-FATES model (Functionally Assembled Terrestrial Ecosystem Simulator (FATES) in the Energy Exascale Earth System Model (E3SM) Land Model (ELM)).
Maoyi Huang, Yi Xu, Marcos Longo, Michael Keller, Ryan G. Knox, Charles D. Koven, and Rosie A. Fisher
Biogeosciences, 17, 4999–5023, https://doi.org/10.5194/bg-17-4999-2020, https://doi.org/10.5194/bg-17-4999-2020, 2020
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The Functionally Assembled Terrestrial Ecosystem Simulator (FATES) is enhanced to mimic the ecological, biophysical, and biogeochemical processes following a logging event. The model can specify the timing and aerial extent of logging events; determine the survivorship of cohorts in the disturbed forest; and modifying the biomass, coarse woody debris, and litter pools. This study lays the foundation to simulate land use change and forest degradation in FATES as part of an Earth system model.
Vivek K. Arora, Anna Katavouta, Richard G. Williams, Chris D. Jones, Victor Brovkin, Pierre Friedlingstein, Jörg Schwinger, Laurent Bopp, Olivier Boucher, Patricia Cadule, Matthew A. Chamberlain, James R. Christian, Christine Delire, Rosie A. Fisher, Tomohiro Hajima, Tatiana Ilyina, Emilie Joetzjer, Michio Kawamiya, Charles D. Koven, John P. Krasting, Rachel M. Law, David M. Lawrence, Andrew Lenton, Keith Lindsay, Julia Pongratz, Thomas Raddatz, Roland Séférian, Kaoru Tachiiri, Jerry F. Tjiputra, Andy Wiltshire, Tongwen Wu, and Tilo Ziehn
Biogeosciences, 17, 4173–4222, https://doi.org/10.5194/bg-17-4173-2020, https://doi.org/10.5194/bg-17-4173-2020, 2020
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Since the preindustrial period, land and ocean have taken up about half of the carbon emitted into the atmosphere by humans. Comparison of different earth system models with the carbon cycle allows us to assess how carbon uptake by land and ocean differs among models. This yields an estimate of uncertainty in our understanding of how land and ocean respond to increasing atmospheric CO2. This paper summarizes results from two such model intercomparison projects that use an idealized scenario.
Yilin Fang, Xingyuan Chen, Jesus Gomez Velez, Xuesong Zhang, Zhuoran Duan, Glenn E. Hammond, Amy E. Goldman, Vanessa A. Garayburu-Caruso, and Emily B. Graham
Geosci. Model Dev., 13, 3553–3569, https://doi.org/10.5194/gmd-13-3553-2020, https://doi.org/10.5194/gmd-13-3553-2020, 2020
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Surface water quality along river corridors can be improved by the area of the stream bed and stream bank in which stream water mixes with shallow groundwater or hyporheic zones (HZs). These zones are ubiquitous and dominated by microorganisms that can process the dissolved nutrients exchanged at this interface of these zones. The modulation of surface water quality can be simulated by connecting the channel water and HZs through hyporheic exchanges using multirate mass transfer representation.
Charles D. Koven, Ryan G. Knox, Rosie A. Fisher, Jeffrey Q. Chambers, Bradley O. Christoffersen, Stuart J. Davies, Matteo Detto, Michael C. Dietze, Boris Faybishenko, Jennifer Holm, Maoyi Huang, Marlies Kovenock, Lara M. Kueppers, Gregory Lemieux, Elias Massoud, Nathan G. McDowell, Helene C. Muller-Landau, Jessica F. Needham, Richard J. Norby, Thomas Powell, Alistair Rogers, Shawn P. Serbin, Jacquelyn K. Shuman, Abigail L. S. Swann, Charuleka Varadharajan, Anthony P. Walker, S. Joseph Wright, and Chonggang Xu
Biogeosciences, 17, 3017–3044, https://doi.org/10.5194/bg-17-3017-2020, https://doi.org/10.5194/bg-17-3017-2020, 2020
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Tropical forests play a crucial role in governing climate feedbacks, and are incredibly diverse ecosystems, yet most Earth system models do not take into account the diversity of plant traits in these forests and how this diversity may govern feedbacks. We present an approach to represent diverse competing plant types within Earth system models, test this approach at a tropical forest site, and explore how the representation of disturbance and competition governs traits of the forest community.
Andrew H. MacDougall, Thomas L. Frölicher, Chris D. Jones, Joeri Rogelj, H. Damon Matthews, Kirsten Zickfeld, Vivek K. Arora, Noah J. Barrett, Victor Brovkin, Friedrich A. Burger, Micheal Eby, Alexey V. Eliseev, Tomohiro Hajima, Philip B. Holden, Aurich Jeltsch-Thömmes, Charles Koven, Nadine Mengis, Laurie Menviel, Martine Michou, Igor I. Mokhov, Akira Oka, Jörg Schwinger, Roland Séférian, Gary Shaffer, Andrei Sokolov, Kaoru Tachiiri, Jerry Tjiputra, Andrew Wiltshire, and Tilo Ziehn
Biogeosciences, 17, 2987–3016, https://doi.org/10.5194/bg-17-2987-2020, https://doi.org/10.5194/bg-17-2987-2020, 2020
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The Zero Emissions Commitment (ZEC) is the change in global temperature expected to occur following the complete cessation of CO2 emissions. Here we use 18 climate models to assess the value of ZEC. For our experiment we find that ZEC 50 years after emissions cease is between −0.36 to +0.29 °C. The most likely value of ZEC is assessed to be close to zero. However, substantial continued warming for decades or centuries following cessation of CO2 emission cannot be ruled out.
Kurt C. Solander, Brent D. Newman, Alessandro Carioca de Araujo, Holly R. Barnard, Z. Carter Berry, Damien Bonal, Mario Bretfeld, Benoit Burban, Luiz Antonio Candido, Rolando Célleri, Jeffery Q. Chambers, Bradley O. Christoffersen, Matteo Detto, Wouter A. Dorigo, Brent E. Ewers, Savio José Filgueiras Ferreira, Alexander Knohl, L. Ruby Leung, Nate G. McDowell, Gretchen R. Miller, Maria Terezinha Ferreira Monteiro, Georgianne W. Moore, Robinson Negron-Juarez, Scott R. Saleska, Christian Stiegler, Javier Tomasella, and Chonggang Xu
Hydrol. Earth Syst. Sci., 24, 2303–2322, https://doi.org/10.5194/hess-24-2303-2020, https://doi.org/10.5194/hess-24-2303-2020, 2020
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We evaluate the soil moisture response in the humid tropics to El Niño during the three most recent super El Niño events. Our estimates are compared to in situ soil moisture estimates that span five continents. We find the strongest and most consistent soil moisture decreases in the Amazon and maritime southeastern Asia, while the most consistent increases occur over eastern Africa. Our results can be used to improve estimates of soil moisture in tropical ecohydrology models at multiple scales.
Stephanie C. Pennington, Nate G. McDowell, J. Patrick Megonigal, James C. Stegen, and Ben Bond-Lamberty
Biogeosciences, 17, 771–780, https://doi.org/10.5194/bg-17-771-2020, https://doi.org/10.5194/bg-17-771-2020, 2020
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Soil respiration (Rs) is the flow of CO2 from the soil surface to the atmosphere and is one of the largest carbon fluxes on land. This study examined the effect of local basal area (tree area) on Rs in a coastal forest in eastern Maryland, USA. Rs measurements were taken as well as distance from soil collar, diameter, and species of each tree within a 15 m radius. We found that trees within 5 m of our sampling points had a positive effect on how sensitive soil respiration was to temperature.
Christian G. Andresen, David M. Lawrence, Cathy J. Wilson, A. David McGuire, Charles Koven, Kevin Schaefer, Elchin Jafarov, Shushi Peng, Xiaodong Chen, Isabelle Gouttevin, Eleanor Burke, Sarah Chadburn, Duoying Ji, Guangsheng Chen, Daniel Hayes, and Wenxin Zhang
The Cryosphere, 14, 445–459, https://doi.org/10.5194/tc-14-445-2020, https://doi.org/10.5194/tc-14-445-2020, 2020
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Widely-used land models project near-surface drying of the terrestrial Arctic despite increases in the net water balance driven by climate change. Drying was generally associated with increases of active-layer depth and permafrost thaw in a warming climate. However, models lack important mechanisms such as thermokarst and soil subsidence that will change the hydrological regime and add to the large uncertainty in the future Arctic hydrological state and the associated permafrost carbon feedback.
Chris D. Jones, Thomas L. Frölicher, Charles Koven, Andrew H. MacDougall, H. Damon Matthews, Kirsten Zickfeld, Joeri Rogelj, Katarzyna B. Tokarska, Nathan P. Gillett, Tatiana Ilyina, Malte Meinshausen, Nadine Mengis, Roland Séférian, Michael Eby, and Friedrich A. Burger
Geosci. Model Dev., 12, 4375–4385, https://doi.org/10.5194/gmd-12-4375-2019, https://doi.org/10.5194/gmd-12-4375-2019, 2019
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Global warming is simply related to the total emission of CO2 allowing us to define a carbon budget. However, information on the Zero Emissions Commitment is a key missing link to assess remaining carbon budgets to achieve the climate targets of the Paris Agreement. It was therefore decided that a small targeted MIP activity to fill this knowledge gap would be extremely valuable. This article formalises the experimental design alongside the other CMIP6 documentation papers.
Marcos Longo, Ryan G. Knox, David M. Medvigy, Naomi M. Levine, Michael C. Dietze, Yeonjoo Kim, Abigail L. S. Swann, Ke Zhang, Christine R. Rollinson, Rafael L. Bras, Steven C. Wofsy, and Paul R. Moorcroft
Geosci. Model Dev., 12, 4309–4346, https://doi.org/10.5194/gmd-12-4309-2019, https://doi.org/10.5194/gmd-12-4309-2019, 2019
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Our paper describes the Ecosystem Demography model. This computer program calculates how plants and ground exchange heat, water, and carbon with the air, and how plants grow, reproduce and die in different climates. Most models simplify forests to an average big tree. We consider that tall, deep-rooted trees get more light and water than small plants, and that some plants can with shade and drought. This diversity helps us to better explain how plants live and interact with the atmosphere.
Marcos Longo, Ryan G. Knox, Naomi M. Levine, Abigail L. S. Swann, David M. Medvigy, Michael C. Dietze, Yeonjoo Kim, Ke Zhang, Damien Bonal, Benoit Burban, Plínio B. Camargo, Matthew N. Hayek, Scott R. Saleska, Rodrigo da Silva, Rafael L. Bras, Steven C. Wofsy, and Paul R. Moorcroft
Geosci. Model Dev., 12, 4347–4374, https://doi.org/10.5194/gmd-12-4347-2019, https://doi.org/10.5194/gmd-12-4347-2019, 2019
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The Ecosystem Demography model calculates the fluxes of heat, water, and carbon between plants and ground and the air, and the life cycle of plants in different climates. To test if our calculations were reasonable, we compared our results with field and satellite measurements. Our model predicts well the extent of the Amazon forest, how much light forests absorb, and how much water forests release to the air. However, it must improve the tree growth rates and how fast dead plants decompose.
Zhiyuan Hu, Jianping Huang, Chun Zhao, Yuanyuan Ma, Qinjian Jin, Yun Qian, L. Ruby Leung, Jianrong Bi, and Jianmin Ma
Atmos. Chem. Phys., 19, 12709–12730, https://doi.org/10.5194/acp-19-12709-2019, https://doi.org/10.5194/acp-19-12709-2019, 2019
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This study investigates aerosol chemical compositions and relative contributions to total aerosols in the western US. The results show that trans-Pacific aerosols have a maximum concentration in the boreal spring, with the greatest contribution from dust. Over western North America, the trans-Pacific aerosols dominate the column-integrated aerosol mass and number concentration. However, near the surface, aerosols mainly originated from local emissions.
Mingchen Ma, Yang Gao, Yuhang Wang, Shaoqing Zhang, L. Ruby Leung, Cheng Liu, Shuxiao Wang, Bin Zhao, Xing Chang, Hang Su, Tianqi Zhang, Lifang Sheng, Xiaohong Yao, and Huiwang Gao
Atmos. Chem. Phys., 19, 12195–12207, https://doi.org/10.5194/acp-19-12195-2019, https://doi.org/10.5194/acp-19-12195-2019, 2019
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Ozone pollution has become severe in China, and extremely high ozone episodes occurred in summer 2017 over the North China Plain. While meteorology impacts are clear, we find that enhanced biogenic emissions, previously ignored by the community, driven by high vapor pressure deficit, land cover change and urban landscape contribute substantially to ozone formation. This study has significant implications for ozone pollution control with more frequent heat waves and urbanization growth in future.
Elias C. Massoud, Chonggang Xu, Rosie A. Fisher, Ryan G. Knox, Anthony P. Walker, Shawn P. Serbin, Bradley O. Christoffersen, Jennifer A. Holm, Lara M. Kueppers, Daniel M. Ricciuto, Liang Wei, Daniel J. Johnson, Jeffrey Q. Chambers, Charlie D. Koven, Nate G. McDowell, and Jasper A. Vrugt
Geosci. Model Dev., 12, 4133–4164, https://doi.org/10.5194/gmd-12-4133-2019, https://doi.org/10.5194/gmd-12-4133-2019, 2019
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We conducted a comprehensive sensitivity analysis to understand behaviors of a demographic vegetation model within a land surface model. By running the model 5000 times with changing input parameter values, we found that (1) the photosynthetic capacity controls carbon fluxes, (2) the allometry is important for tree growth, and (3) the targeted carbon storage is important for tree survival. These results can provide guidance on improved model parameterization for a better fit to observations.
Marcos A. S. Scaranello, Michael Keller, Marcos Longo, Maiza N. dos-Santos, Veronika Leitold, Douglas C. Morton, Ekena R. Pinagé, and Fernando Del Bon Espírito-Santo
Biogeosciences, 16, 3457–3474, https://doi.org/10.5194/bg-16-3457-2019, https://doi.org/10.5194/bg-16-3457-2019, 2019
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The coarse dead wood component of the tropical forest carbon pool is rarely measured. For the first time, we developed models for predicting coarse dead wood in Amazonian forests by using airborne laser scanning data. Our models produced site-based estimates similar to independent field estimates found in the literature. Our study provides an approach for estimating coarse dead wood pools from remotely sensed data and mapping those pools over large scales in intact and degraded forests.
Chun Zhao, Mingyue Xu, Yu Wang, Meixin Zhang, Jianping Guo, Zhiyuan Hu, L. Ruby Leung, Michael Duda, and William Skamarock
Geosci. Model Dev., 12, 2707–2726, https://doi.org/10.5194/gmd-12-2707-2019, https://doi.org/10.5194/gmd-12-2707-2019, 2019
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Simulations at global uniform and variable resolutions share similar characteristics of precipitation and wind in the refined region. The experiments reveal the significant impacts of resolution on simulating the distribution and intensity of precipitation and updrafts. This study provides evidence supporting the use of convection-permitting global variable-resolution simulations to study extreme precipitation.
Junxi Zhang, Yang Gao, L. Ruby Leung, Kun Luo, Huan Liu, Jean-Francois Lamarque, Jianren Fan, Xiaohong Yao, Huiwang Gao, and Tatsuya Nagashima
Atmos. Chem. Phys., 19, 887–900, https://doi.org/10.5194/acp-19-887-2019, https://doi.org/10.5194/acp-19-887-2019, 2019
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ACCMIP simulations were used to study NOy deposition over East Asia in the future. Both dry and wet NOy deposition show significant decreases in the 2100s under RCP4.5 and RCP8.5 due to large anthropogenic emission reduction. The changes in climate only significantly affect the wet deposition primarily linked to changes in precipitation. Over the coastal seas of China, weaker transport of NOy from land due to emission reduction infers a larger impact from shipping and lightning emissions.
Jennifer W. Harden, Jonathan A. O'Donnell, Katherine A. Heckman, Benjamin N. Sulman, Charles D. Koven, Chien-Lu Ping, and Gary J. Michaelson
SOIL Discuss., https://doi.org/10.5194/soil-2018-41, https://doi.org/10.5194/soil-2018-41, 2019
Revised manuscript not accepted
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We examined changes in soil carbon (C) associated with permafrost thaw, warming, and ecosystem shifts using a space-for-time study. Soil C turnover was estimated for soil C fractions using soil C and radiocarbon data. Observations informed a simple model to track soil C change over time. Both losses and gains of soil C occur in the profile due to shifts in C among density-separated fractions. Thawing initially resulted in C gains to mineral soil and eventually C losses as warming persists.
Ge Zhang, Yang Gao, Wenju Cai, L. Ruby Leung, Shuxiao Wang, Bin Zhao, Minghuai Wang, Huayao Shan, Xiaohong Yao, and Huiwang Gao
Atmos. Chem. Phys., 19, 565–576, https://doi.org/10.5194/acp-19-565-2019, https://doi.org/10.5194/acp-19-565-2019, 2019
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Based on observed data, this study reveals a distinct seesaw feature of abnormally high and low PM2.5 concentrations in December 2015 and January 2016 over North China. The mechanism of the seesaw pattern was found to be linked to a super El Niño and the Arctic Oscillation (AO). During the mature phase of El Niño in December 2015, the weakened East Asian winter monsoon favors strong haze formation; however, the circulation pattern was reversed in the next month due to the phase change of the AO.
Ashehad A. Ali, Yuanchao Fan, Marife D. Corre, Martyna M. Kotowska, Evelyn Hassler, Fernando E. Moyano, Christian Stiegler, Alexander Röll, Ana Meijide, Andre Ringeler, Christoph Leuschner, Tania June, Suria Tarigan, Holger Kreft, Dirk Hölscher, Chonggang Xu, Charles D. Koven, Rosie Fisher, Edzo Veldkamp, and Alexander Knohl
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2018-236, https://doi.org/10.5194/gmd-2018-236, 2018
Revised manuscript not accepted
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We used carbon-use and water-use related datasets of small-holder rubber plantations from Jambi province, Indonesia to develop and calibrate a rubber plant functional type for the Community Land Model (CLM-rubber). Increased sensitivity of stomata to soil water stress and enhanced respiration costs enabled the model to capture the magnitude of transpiration and leaf area index. Including temporal variations in leaf life span enabled the model to better capture the seasonality of leaf litterfall.
Matthew N. Hayek, Marcos Longo, Jin Wu, Marielle N. Smith, Natalia Restrepo-Coupe, Raphael Tapajós, Rodrigo da Silva, David R. Fitzjarrald, Plinio B. Camargo, Lucy R. Hutyra, Luciana F. Alves, Bruce Daube, J. William Munger, Kenia T. Wiedemann, Scott R. Saleska, and Steven C. Wofsy
Biogeosciences, 15, 4833–4848, https://doi.org/10.5194/bg-15-4833-2018, https://doi.org/10.5194/bg-15-4833-2018, 2018
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We investigated the roles that weather and forest disturbances like drought play in shaping changes in ecosystem photosynthesis and carbon exchange in an Amazon forest. We discovered that weather largely influenced differences between years, but a prior drought, which occurred 3 years before measurements started, likely hampered photosynthesis in the first year. This is the first atmospheric evidence that drought can have legacy impacts on Amazon forest photosynthesis.
Junxi Zhang, Yang Gao, Kun Luo, L. Ruby Leung, Yang Zhang, Kai Wang, and Jianren Fan
Atmos. Chem. Phys., 18, 9861–9877, https://doi.org/10.5194/acp-18-9861-2018, https://doi.org/10.5194/acp-18-9861-2018, 2018
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We used a regional model to investigate the impact of atmosphere with high temperature and low wind speed on ozone concentration. When these compound events (heat waves and stagnant weather) occur simultaneously, a striking ozone enhancement is revealed. This type of compound event is projected to increase more dominantly compared to single events in the future over the US, Europe, and China, implying the importance of reducing emissions in order to alleviate the impact from the compound events.
Xiyan Xu, William J. Riley, Charles D. Koven, and Gensuo Jia
Biogeosciences Discuss., https://doi.org/10.5194/bg-2018-257, https://doi.org/10.5194/bg-2018-257, 2018
Preprint withdrawn
Christine A. Shields, Jonathan J. Rutz, Lai-Yung Leung, F. Martin Ralph, Michael Wehner, Brian Kawzenuk, Juan M. Lora, Elizabeth McClenny, Tashiana Osborne, Ashley E. Payne, Paul Ullrich, Alexander Gershunov, Naomi Goldenson, Bin Guan, Yun Qian, Alexandre M. Ramos, Chandan Sarangi, Scott Sellars, Irina Gorodetskaya, Karthik Kashinath, Vitaliy Kurlin, Kelly Mahoney, Grzegorz Muszynski, Roger Pierce, Aneesh C. Subramanian, Ricardo Tome, Duane Waliser, Daniel Walton, Gary Wick, Anna Wilson, David Lavers, Prabhat, Allison Collow, Harinarayan Krishnan, Gudrun Magnusdottir, and Phu Nguyen
Geosci. Model Dev., 11, 2455–2474, https://doi.org/10.5194/gmd-11-2455-2018, https://doi.org/10.5194/gmd-11-2455-2018, 2018
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ARTMIP (Atmospheric River Tracking Method Intercomparison Project) is a community effort with the explicit goal of understanding the uncertainties, and the implications of those uncertainties, in atmospheric river science solely due to detection algorithm. ARTMIP strives to quantify these differences and provide guidance on appropriate algorithmic choices for the science question posed. Project goals, experimental design, and preliminary results are provided.
Kai Zhang, Philip J. Rasch, Mark A. Taylor, Hui Wan, Ruby Leung, Po-Lun Ma, Jean-Christophe Golaz, Jon Wolfe, Wuyin Lin, Balwinder Singh, Susannah Burrows, Jin-Ho Yoon, Hailong Wang, Yun Qian, Qi Tang, Peter Caldwell, and Shaocheng Xie
Geosci. Model Dev., 11, 1971–1988, https://doi.org/10.5194/gmd-11-1971-2018, https://doi.org/10.5194/gmd-11-1971-2018, 2018
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The conservation of total water is an important numerical feature for global Earth system models. Even small conservation problems in the water budget can lead to systematic errors in century-long simulations for sea level rise projection. This study quantifies and reduces various sources of water conservation error in the atmosphere component of the Energy Exascale Earth System Model.
Katrina E. Bennett, Theodore J. Bohn, Kurt Solander, Nathan G. McDowell, Chonggang Xu, Enrique Vivoni, and Richard S. Middleton
Hydrol. Earth Syst. Sci., 22, 709–725, https://doi.org/10.5194/hess-22-709-2018, https://doi.org/10.5194/hess-22-709-2018, 2018
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We applied the Variable Infiltration Capacity hydrologic model to examine scenarios of change under climate and landscape disturbances in the San Juan River basin, a major sub-watershed of the Colorado River basin. Climate change coupled with landscape disturbance leads to reduced streamflow in the San Juan River basin. Disturbances are expected to be widespread in this region. Therefore, accounting for these changes within the context of climate change is imperative for water resource planning.
Nicholas C. Parazoo, Charles D. Koven, David M. Lawrence, Vladimir Romanovsky, and Charles E. Miller
The Cryosphere, 12, 123–144, https://doi.org/10.5194/tc-12-123-2018, https://doi.org/10.5194/tc-12-123-2018, 2018
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Carbon models suggest the permafrost carbon feedback (soil carbon emissions from permafrost thaw) acts as a slow, unobservable leak. We investigate if permafrost temperature provides an observable signal to detect feedbacks. We find a slow carbon feedback in warm sub-Arctic permafrost soils, but potentially rapid feedback in cold Arctic permafrost. This is surprising since the cold permafrost region is dominated by tundra and underlain by deep, cold permafrost thought impervious to such changes.
Wei Li, Philippe Ciais, Shushi Peng, Chao Yue, Yilong Wang, Martin Thurner, Sassan S. Saatchi, Almut Arneth, Valerio Avitabile, Nuno Carvalhais, Anna B. Harper, Etsushi Kato, Charles Koven, Yi Y. Liu, Julia E.M.S. Nabel, Yude Pan, Julia Pongratz, Benjamin Poulter, Thomas A. M. Pugh, Maurizio Santoro, Stephen Sitch, Benjamin D. Stocker, Nicolas Viovy, Andy Wiltshire, Rasoul Yousefpour, and Sönke Zaehle
Biogeosciences, 14, 5053–5067, https://doi.org/10.5194/bg-14-5053-2017, https://doi.org/10.5194/bg-14-5053-2017, 2017
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We used several observation-based biomass datasets to constrain the historical land-use change carbon emissions simulated by models. Compared to the range of the original modeled emissions (from 94 to 273 Pg C), the observationally constrained global cumulative emission estimate is 155 ± 50 Pg C (1σ Gaussian error) from 1901 to 2012. Our approach can also be applied to evaluate the LULCC impact of land-based climate mitigation policies.
Henrique F. Duarte, Brett M. Raczka, Daniel M. Ricciuto, John C. Lin, Charles D. Koven, Peter E. Thornton, David R. Bowling, Chun-Ta Lai, Kenneth J. Bible, and James R. Ehleringer
Biogeosciences, 14, 4315–4340, https://doi.org/10.5194/bg-14-4315-2017, https://doi.org/10.5194/bg-14-4315-2017, 2017
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We evaluate the Community Land Model (CLM4.5) against observations at an old-growth coniferous forest site that is subjected to water stress each summer. We found that, after calibration, CLM was able to reasonably simulate the observed fluxes of energy and carbon, carbon stocks, carbon isotope ratios, and ecosystem response to water stress. This study demonstrates that carbon isotopes can expose structural weaknesses in CLM and provide a key constraint that may guide future model development.
Randal D. Koster, Alan K. Betts, Paul A. Dirmeyer, Marc Bierkens, Katrina E. Bennett, Stephen J. Déry, Jason P. Evans, Rong Fu, Felipe Hernandez, L. Ruby Leung, Xu Liang, Muhammad Masood, Hubert Savenije, Guiling Wang, and Xing Yuan
Hydrol. Earth Syst. Sci., 21, 3777–3798, https://doi.org/10.5194/hess-21-3777-2017, https://doi.org/10.5194/hess-21-3777-2017, 2017
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Large-scale hydrological variability can affect society in profound ways; floods and droughts, for example, often cause major damage and hardship. A recent gathering of hydrologists at a symposium to honor the career of Professor Eric Wood motivates the present survey of recent research on this variability. The surveyed literature and the illustrative examples provided in the paper show that research into hydrological variability continues to be strong, vibrant, and multifaceted.
Sina Muster, Kurt Roth, Moritz Langer, Stephan Lange, Fabio Cresto Aleina, Annett Bartsch, Anne Morgenstern, Guido Grosse, Benjamin Jones, A. Britta K. Sannel, Ylva Sjöberg, Frank Günther, Christian Andresen, Alexandra Veremeeva, Prajna R. Lindgren, Frédéric Bouchard, Mark J. Lara, Daniel Fortier, Simon Charbonneau, Tarmo A. Virtanen, Gustaf Hugelius, Juri Palmtag, Matthias B. Siewert, William J. Riley, Charles D. Koven, and Julia Boike
Earth Syst. Sci. Data, 9, 317–348, https://doi.org/10.5194/essd-9-317-2017, https://doi.org/10.5194/essd-9-317-2017, 2017
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Waterbodies are abundant in Arctic permafrost lowlands. Most waterbodies are ponds with a surface area smaller than 100 x 100 m. The Permafrost Region Pond and Lake Database (PeRL) for the first time maps ponds as small as 10 x 10 m. PeRL maps can be used to document changes both by comparing them to historical and future imagery. The distribution of waterbodies in the Arctic is important to know in order to manage resources in the Arctic and to improve climate predictions in the Arctic.
Kathrin M. Keller, Sebastian Lienert, Anil Bozbiyik, Thomas F. Stocker, Olga V. Churakova (Sidorova), David C. Frank, Stefan Klesse, Charles D. Koven, Markus Leuenberger, William J. Riley, Matthias Saurer, Rolf Siegwolf, Rosemarie B. Weigt, and Fortunat Joos
Biogeosciences, 14, 2641–2673, https://doi.org/10.5194/bg-14-2641-2017, https://doi.org/10.5194/bg-14-2641-2017, 2017
Shi Zhong, Yun Qian, Chun Zhao, Ruby Leung, Hailong Wang, Ben Yang, Jiwen Fan, Huiping Yan, Xiu-Qun Yang, and Dongqing Liu
Atmos. Chem. Phys., 17, 5439–5457, https://doi.org/10.5194/acp-17-5439-2017, https://doi.org/10.5194/acp-17-5439-2017, 2017
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An online climate–chemistry coupled model (WRF-Chem) is integrated for 5 years at cloud-permitting scale to quantify the impacts of urbanization-induced changes in land cover and pollutants emission on regional climate in the Yangtze River Delta region in eastern China. Urbanization over this region increases the frequency of extreme precipitation and heat wave in summer. The results could help China government in making policies in mitigating the environmental impact of urbanization.
Andrew G. Slater, David M. Lawrence, and Charles D. Koven
The Cryosphere, 11, 989–996, https://doi.org/10.5194/tc-11-989-2017, https://doi.org/10.5194/tc-11-989-2017, 2017
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This work defines a metric for evaluation of a specific model snow process, namely, heat transfer through snow into soil. Heat transfer through snow regulates the difference in air temperature versus soil temperature. Accurate representation of the snow heat transfer process is critically important for accurate representation of the current and future state of permafrost. Utilizing this metric, we can clearly identify models that can and cannot reasonably represent snow heat transfer.
Xiangyu Luo, Hong-Yi Li, L. Ruby Leung, Teklu K. Tesfa, Augusto Getirana, Fabrice Papa, and Laura L. Hess
Geosci. Model Dev., 10, 1233–1259, https://doi.org/10.5194/gmd-10-1233-2017, https://doi.org/10.5194/gmd-10-1233-2017, 2017
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This study shows that alleviating vegetation-caused biases in DEM data, refining channel cross-sectional geometry and Manning roughness coefficients, as well as accounting for backwater effects can effectively improve the modeling of streamflow, river stages and flood extent in the Amazon Basin. The obtained understanding could be helpful to hydrological modeling in basins with evident inundation, which has important implications for improving land–atmosphere interactions in Earth system models.
Teklu K. Tesfa and Lai-Yung Ruby Leung
Geosci. Model Dev., 10, 873–888, https://doi.org/10.5194/gmd-10-873-2017, https://doi.org/10.5194/gmd-10-873-2017, 2017
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Motivated by the significant topographic influence on land surface processes, this study explored two methods to discretize watersheds into two types of subgrid structures to capture spatial heterogeneity for land surface models. Adopting geomorphologic concepts in watershed discretization yields improved capability in capturing subgrid topographic heterogeneity, which also allowed climatic and land cover variability to be better represented with a nominal increase in computational requirements.
Jiwen Fan, L. Ruby Leung, Daniel Rosenfeld, and Paul J. DeMott
Atmos. Chem. Phys., 17, 1017–1035, https://doi.org/10.5194/acp-17-1017-2017, https://doi.org/10.5194/acp-17-1017-2017, 2017
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How orographic mixed-phase clouds respond to changes in cloud condensation nuclei (CCN) and ice nucleating particles (INPs) is highly uncertain. We conducted this study to improve understanding of these processes. We found a new mechanism through which CCN can invigorate orographic mixed-phase clouds and drastically intensify snow precipitation when CCN concentrations are high. Our findings have very important implications for orographic precipitation in polluted regions.
Saulo R. Freitas, Jairo Panetta, Karla M. Longo, Luiz F. Rodrigues, Demerval S. Moreira, Nilton E. Rosário, Pedro L. Silva Dias, Maria A. F. Silva Dias, Enio P. Souza, Edmilson D. Freitas, Marcos Longo, Ariane Frassoni, Alvaro L. Fazenda, Cláudio M. Santos e Silva, Cláudio A. B. Pavani, Denis Eiras, Daniela A. França, Daniel Massaru, Fernanda B. Silva, Fernando C. Santos, Gabriel Pereira, Gláuber Camponogara, Gonzalo A. Ferrada, Haroldo F. Campos Velho, Isilda Menezes, Julliana L. Freire, Marcelo F. Alonso, Madeleine S. Gácita, Maurício Zarzur, Rafael M. Fonseca, Rafael S. Lima, Ricardo A. Siqueira, Rodrigo Braz, Simone Tomita, Valter Oliveira, and Leila D. Martins
Geosci. Model Dev., 10, 189–222, https://doi.org/10.5194/gmd-10-189-2017, https://doi.org/10.5194/gmd-10-189-2017, 2017
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We present a new version of the Brazilian developments on the Regional Atmospheric Modeling System (BRAMS) where different previous versions for weather, chemistry, and the carbon cycle were unified in a single harmonized software system. This version also has a new set of state-of-the-art physical parametrizations and higher computational parallel and memory usage efficiency. BRAMS has been applied for research and operational weather and air quality forecasting, largely in South America.
Reindert J. Haarsma, Malcolm J. Roberts, Pier Luigi Vidale, Catherine A. Senior, Alessio Bellucci, Qing Bao, Ping Chang, Susanna Corti, Neven S. Fučkar, Virginie Guemas, Jost von Hardenberg, Wilco Hazeleger, Chihiro Kodama, Torben Koenigk, L. Ruby Leung, Jian Lu, Jing-Jia Luo, Jiafu Mao, Matthew S. Mizielinski, Ryo Mizuta, Paulo Nobre, Masaki Satoh, Enrico Scoccimarro, Tido Semmler, Justin Small, and Jin-Song von Storch
Geosci. Model Dev., 9, 4185–4208, https://doi.org/10.5194/gmd-9-4185-2016, https://doi.org/10.5194/gmd-9-4185-2016, 2016
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Recent progress in computing power has enabled climate models to simulate more processes in detail and on a smaller scale. Here we present a common protocol for these high-resolution runs that will foster the analysis and understanding of the impact of model resolution on the simulated climate. These runs will also serve as a more reliable source for assessing climate risks that are associated with small-scale weather phenomena such as tropical cyclones.
Brett Raczka, Henrique F. Duarte, Charles D. Koven, Daniel Ricciuto, Peter E. Thornton, John C. Lin, and David R. Bowling
Biogeosciences, 13, 5183–5204, https://doi.org/10.5194/bg-13-5183-2016, https://doi.org/10.5194/bg-13-5183-2016, 2016
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We use carbon isotopes of CO2 to improve the performance of a land surface model, a component with earth system climate models. We found that isotope observations can provide important information related to the exchange of carbon and water from vegetation driven by environmental stress from low atmospheric moisture and nitrogen limitation. It follows that isotopes have a unique potential to improve model performance and provide insight into land surface model development.
Fang Zhao, Ning Zeng, Ghassem Asrar, Pierre Friedlingstein, Akihiko Ito, Atul Jain, Eugenia Kalnay, Etsushi Kato, Charles D. Koven, Ben Poulter, Rashid Rafique, Stephen Sitch, Shijie Shu, Beni Stocker, Nicolas Viovy, Andy Wiltshire, and Sonke Zaehle
Biogeosciences, 13, 5121–5137, https://doi.org/10.5194/bg-13-5121-2016, https://doi.org/10.5194/bg-13-5121-2016, 2016
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The increasing seasonality of atmospheric CO2 is strongly linked with enhanced land vegetation activities in the last 5 decades, for which the importance of increasing CO2, climate and land use/cover change was evaluated in single model studies (Zeng et al., 2014; Forkel et al., 2016). Here we examine the relative importance of these factors in multiple models. Our results highlight models can show similar results in some benchmarks with different underlying regional dynamics.
Xiyan Xu, William J. Riley, Charles D. Koven, Dave P. Billesbach, Rachel Y.-W. Chang, Róisín Commane, Eugénie S. Euskirchen, Sean Hartery, Yoshinobu Harazono, Hiroki Iwata, Kyle C. McDonald, Charles E. Miller, Walter C. Oechel, Benjamin Poulter, Naama Raz-Yaseef, Colm Sweeney, Margaret Torn, Steven C. Wofsy, Zhen Zhang, and Donatella Zona
Biogeosciences, 13, 5043–5056, https://doi.org/10.5194/bg-13-5043-2016, https://doi.org/10.5194/bg-13-5043-2016, 2016
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Wetlands are the largest global natural methane source. Peat-rich bogs and fens lying between 50°N and 70°N contribute 10–30% to this source. The predictive capability of the seasonal methane cycle can directly affect the estimation of global methane budget. We present multiscale methane seasonal emission by observations and modeling and find that the uncertainties in predicting the seasonal methane emissions are from the wetland extent, cold-season CH4 production and CH4 transport processes.
Chris D. Jones, Vivek Arora, Pierre Friedlingstein, Laurent Bopp, Victor Brovkin, John Dunne, Heather Graven, Forrest Hoffman, Tatiana Ilyina, Jasmin G. John, Martin Jung, Michio Kawamiya, Charlie Koven, Julia Pongratz, Thomas Raddatz, James T. Randerson, and Sönke Zaehle
Geosci. Model Dev., 9, 2853–2880, https://doi.org/10.5194/gmd-9-2853-2016, https://doi.org/10.5194/gmd-9-2853-2016, 2016
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How the carbon cycle interacts with climate will affect future climate change and how society plans emissions reductions to achieve climate targets. The Coupled Climate Carbon Cycle Model Intercomparison Project (C4MIP) is an endorsed activity of CMIP6 and aims to quantify these interactions and feedbacks in state-of-the-art climate models. This paper lays out the experimental protocol for modelling groups to follow to contribute to C4MIP. It is a contribution to the CMIP6 GMD Special Issue.
Wenli Wang, Annette Rinke, John C. Moore, Duoying Ji, Xuefeng Cui, Shushi Peng, David M. Lawrence, A. David McGuire, Eleanor J. Burke, Xiaodong Chen, Bertrand Decharme, Charles Koven, Andrew MacDougall, Kazuyuki Saito, Wenxin Zhang, Ramdane Alkama, Theodore J. Bohn, Philippe Ciais, Christine Delire, Isabelle Gouttevin, Tomohiro Hajima, Gerhard Krinner, Dennis P. Lettenmaier, Paul A. Miller, Benjamin Smith, Tetsuo Sueyoshi, and Artem B. Sherstiukov
The Cryosphere, 10, 1721–1737, https://doi.org/10.5194/tc-10-1721-2016, https://doi.org/10.5194/tc-10-1721-2016, 2016
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The winter snow insulation is a key process for air–soil temperature coupling and is relevant for permafrost simulations. Differences in simulated air–soil temperature relationships and their modulation by climate conditions are found to be related to the snow model physics. Generally, models with better performance apply multilayer snow schemes.
Bin Zhao, Kuo-Nan Liou, Yu Gu, Cenlin He, Wee-Liang Lee, Xing Chang, Qinbin Li, Shuxiao Wang, Hsien-Liang R. Tseng, Lai-Yung R. Leung, and Jiming Hao
Atmos. Chem. Phys., 16, 5841–5852, https://doi.org/10.5194/acp-16-5841-2016, https://doi.org/10.5194/acp-16-5841-2016, 2016
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We examine the impact of buildings on surface solar fluxes in Beijing by accounting for their 3-D structures. We find that inclusion of buildings changes surface solar fluxes by within ±1 W m−2, ±1–10 W m−2, and up to ±100 W m−2 at grid resolutions of 4 km, 800 m, and 90 m, respectively. We can resolve pairs of positive-negative flux deviations on different sides of buildings at ≤ 800 m resolutions. We should treat building-effect on solar fluxes differently in models with different resolutions.
Zhiyuan Hu, Chun Zhao, Jianping Huang, L. Ruby Leung, Yun Qian, Hongbin Yu, Lei Huang, and Olga V. Kalashnikova
Geosci. Model Dev., 9, 1725–1746, https://doi.org/10.5194/gmd-9-1725-2016, https://doi.org/10.5194/gmd-9-1725-2016, 2016
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This study conducts the simulation of WRF-Chem with the quasi-global configuration for 2010–2014, and evaluates the simulation with multiple observation datasets for the first time. This study demonstrates that the WRF-Chem quasi-global simulation can be used for investigating trans-Pacific transport of aerosols and providing reasonable inflow chemical boundaries for the western USA to further understand the impact of transported pollutants on the regional air quality and climate.
Douglas C. Morton, Jérémy Rubio, Bruce D. Cook, Jean-Philippe Gastellu-Etchegorry, Marcos Longo, Hyeungu Choi, Maria Hunter, and Michael Keller
Biogeosciences, 13, 2195–2206, https://doi.org/10.5194/bg-13-2195-2016, https://doi.org/10.5194/bg-13-2195-2016, 2016
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Seasonal dynamics of tropical forest productivity remain an important source of uncertainty in assessments of the land carbon sink. This study confirms the potential for canopy structure and illumination geometry to alter the seasonal availability of light for canopy photosynthesis without changes in canopy composition. Our results point to the need for 3-D forest structure in ecosystem models to account the impact of changing illumination geometry on tropical forest productivity.
W. Wang, A. Rinke, J. C. Moore, X. Cui, D. Ji, Q. Li, N. Zhang, C. Wang, S. Zhang, D. M. Lawrence, A. D. McGuire, W. Zhang, C. Delire, C. Koven, K. Saito, A. MacDougall, E. Burke, and B. Decharme
The Cryosphere, 10, 287–306, https://doi.org/10.5194/tc-10-287-2016, https://doi.org/10.5194/tc-10-287-2016, 2016
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We use a model-ensemble approach for simulating permafrost on the Tibetan Plateau. We identify the uncertainties across models (state-of-the-art land surface models) and across methods (most commonly used methods to define permafrost).
We differentiate between uncertainties stemming from climatic driving data or from physical process parameterization, and show how these uncertainties vary seasonally and inter-annually, and how estimates are subject to the definition of permafrost used.
We differentiate between uncertainties stemming from climatic driving data or from physical process parameterization, and show how these uncertainties vary seasonally and inter-annually, and how estimates are subject to the definition of permafrost used.
S. Peng, P. Ciais, G. Krinner, T. Wang, I. Gouttevin, A. D. McGuire, D. Lawrence, E. Burke, X. Chen, B. Decharme, C. Koven, A. MacDougall, A. Rinke, K. Saito, W. Zhang, R. Alkama, T. J. Bohn, C. Delire, T. Hajima, D. Ji, D. P. Lettenmaier, P. A. Miller, J. C. Moore, B. Smith, and T. Sueyoshi
The Cryosphere, 10, 179–192, https://doi.org/10.5194/tc-10-179-2016, https://doi.org/10.5194/tc-10-179-2016, 2016
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Soil temperature change is a key indicator of the dynamics of permafrost. Using nine process-based ecosystem models with permafrost processes, a large spread of soil temperature trends across the models. Air temperature and longwave downward radiation are the main drivers of soil temperature trends. Based on an emerging observation constraint method, the total boreal near-surface permafrost area decrease comprised between 39 ± 14 × 103 and 75 ± 14 × 103 km2 yr−1 from 1960 to 2000.
Q. Zhu, W. J. Riley, J. Tang, and C. D. Koven
Biogeosciences, 13, 341–363, https://doi.org/10.5194/bg-13-341-2016, https://doi.org/10.5194/bg-13-341-2016, 2016
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Here we develop, calibrate, and test a nutrient competition model that accounts for multiple soil nutrients interacting with multiple biotic and abiotic consumers based on enzyme kinetics theory. Our model provides an ecologically consistent representation of nutrient competition appropriate for land biogeochemical models integrated in Earth system models.
G. Murray-Tortarolo, P. Friedlingstein, S. Sitch, V. J. Jaramillo, F. Murguía-Flores, A. Anav, Y. Liu, A. Arneth, A. Arvanitis, A. Harper, A. Jain, E. Kato, C. Koven, B. Poulter, B. D. Stocker, A. Wiltshire, S. Zaehle, and N. Zeng
Biogeosciences, 13, 223–238, https://doi.org/10.5194/bg-13-223-2016, https://doi.org/10.5194/bg-13-223-2016, 2016
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We modelled the carbon (C) cycle in Mexico for three different time periods: past (20th century), present (2000-2005) and future (2006-2100). We used different available products to estimate C stocks and fluxes in the country. Contrary to other current estimates, our results showed that Mexico was a C sink and this is likely to continue in the next century (unless the most extreme climate-change scenarios are reached).
C. Le Quéré, R. Moriarty, R. M. Andrew, J. G. Canadell, S. Sitch, J. I. Korsbakken, P. Friedlingstein, G. P. Peters, R. J. Andres, T. A. Boden, R. A. Houghton, J. I. House, R. F. Keeling, P. Tans, A. Arneth, D. C. E. Bakker, L. Barbero, L. Bopp, J. Chang, F. Chevallier, L. P. Chini, P. Ciais, M. Fader, R. A. Feely, T. Gkritzalis, I. Harris, J. Hauck, T. Ilyina, A. K. Jain, E. Kato, V. Kitidis, K. Klein Goldewijk, C. Koven, P. Landschützer, S. K. Lauvset, N. Lefèvre, A. Lenton, I. D. Lima, N. Metzl, F. Millero, D. R. Munro, A. Murata, J. E. M. S. Nabel, S. Nakaoka, Y. Nojiri, K. O'Brien, A. Olsen, T. Ono, F. F. Pérez, B. Pfeil, D. Pierrot, B. Poulter, G. Rehder, C. Rödenbeck, S. Saito, U. Schuster, J. Schwinger, R. Séférian, T. Steinhoff, B. D. Stocker, A. J. Sutton, T. Takahashi, B. Tilbrook, I. T. van der Laan-Luijkx, G. R. van der Werf, S. van Heuven, D. Vandemark, N. Viovy, A. Wiltshire, S. Zaehle, and N. Zeng
Earth Syst. Sci. Data, 7, 349–396, https://doi.org/10.5194/essd-7-349-2015, https://doi.org/10.5194/essd-7-349-2015, 2015
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Accurate assessment of anthropogenic carbon dioxide emissions and their redistribution among the atmosphere, ocean, and terrestrial biosphere is important to understand the global carbon cycle, support the development of climate policies, and project future climate change. We describe data sets and a methodology to quantify all major components of the global carbon budget, including their uncertainties, based on a range of data and models and their interpretation by a broad scientific community.
R. A. Fisher, S. Muszala, M. Verteinstein, P. Lawrence, C. Xu, N. G. McDowell, R. G. Knox, C. Koven, J. Holm, B. M. Rogers, A. Spessa, D. Lawrence, and G. Bonan
Geosci. Model Dev., 8, 3593–3619, https://doi.org/10.5194/gmd-8-3593-2015, https://doi.org/10.5194/gmd-8-3593-2015, 2015
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Predicting the distribution of vegetation under novel climates is important, both to understand how climate change will impact ecosystem services, but also to understand how vegetation changes might affect the carbon, energy and water cycles. Historically, predictions have been heavily dependent upon observations of existing vegetation boundaries. In this paper, we attempt to predict ecosystem boundaries from the ``bottom up'', and illustrate the complexities and promise of this approach.
C. He, K.-N. Liou, Y. Takano, R. Zhang, M. Levy Zamora, P. Yang, Q. Li, and L. R. Leung
Atmos. Chem. Phys., 15, 11967–11980, https://doi.org/10.5194/acp-15-11967-2015, https://doi.org/10.5194/acp-15-11967-2015, 2015
C. D. Koven, J. Q. Chambers, K. Georgiou, R. Knox, R. Negron-Juarez, W. J. Riley, V. K. Arora, V. Brovkin, P. Friedlingstein, and C. D. Jones
Biogeosciences, 12, 5211–5228, https://doi.org/10.5194/bg-12-5211-2015, https://doi.org/10.5194/bg-12-5211-2015, 2015
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Terrestrial carbon feedbacks are a large uncertainty in climate change. We separate modeled feedback responses into those governed by changed carbon inputs (productivity) and changed outputs (turnover). The disaggregated responses show that both are important in controlling inter-model uncertainty. Interactions between productivity and turnover are also important, and research must focus on these interactions for more accurate projections of carbon cycle feedbacks.
M. A. Rawlins, A. D. McGuire, J. S. Kimball, P. Dass, D. Lawrence, E. Burke, X. Chen, C. Delire, C. Koven, A. MacDougall, S. Peng, A. Rinke, K. Saito, W. Zhang, R. Alkama, T. J. Bohn, P. Ciais, B. Decharme, I. Gouttevin, T. Hajima, D. Ji, G. Krinner, D. P. Lettenmaier, P. Miller, J. C. Moore, B. Smith, and T. Sueyoshi
Biogeosciences, 12, 4385–4405, https://doi.org/10.5194/bg-12-4385-2015, https://doi.org/10.5194/bg-12-4385-2015, 2015
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We used outputs from nine models to better understand land-atmosphere CO2 exchanges across Northern Eurasia over the period 1960-1990. Model estimates were assessed against independent ground and satellite measurements. We find that the models show a weakening of the CO2 sink over time; the models tend to overestimate respiration, causing an underestimate in NEP; the model range in regional NEP is twice the multimodel mean. Residence time for soil carbon decreased, amid a gain in carbon storage.
W.-L. Lee, Y. Gu, K. N. Liou, L. R. Leung, and H.-H. Hsu
Atmos. Chem. Phys., 15, 5405–5413, https://doi.org/10.5194/acp-15-5405-2015, https://doi.org/10.5194/acp-15-5405-2015, 2015
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This paper investigates 3-D mountain effects on solar flux distributions and their impact on surface hydrology over the western United States, specifically the Rocky Mountains and the Sierra Nevada, using the global CCSM4 (CAM4/CLM4) with a 0.23°×0.31° resolution for simulations over 6 years. We show that deviations in the net surface fluxes are not only affected by 3-D mountains but also influenced by feedbacks of cloud and snow in association with the long-term simulations.
C. Le Quéré, R. Moriarty, R. M. Andrew, G. P. Peters, P. Ciais, P. Friedlingstein, S. D. Jones, S. Sitch, P. Tans, A. Arneth, T. A. Boden, L. Bopp, Y. Bozec, J. G. Canadell, L. P. Chini, F. Chevallier, C. E. Cosca, I. Harris, M. Hoppema, R. A. Houghton, J. I. House, A. K. Jain, T. Johannessen, E. Kato, R. F. Keeling, V. Kitidis, K. Klein Goldewijk, C. Koven, C. S. Landa, P. Landschützer, A. Lenton, I. D. Lima, G. Marland, J. T. Mathis, N. Metzl, Y. Nojiri, A. Olsen, T. Ono, S. Peng, W. Peters, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. E. Salisbury, U. Schuster, J. Schwinger, R. Séférian, J. Segschneider, T. Steinhoff, B. D. Stocker, A. J. Sutton, T. Takahashi, B. Tilbrook, G. R. van der Werf, N. Viovy, Y.-P. Wang, R. Wanninkhof, A. Wiltshire, and N. Zeng
Earth Syst. Sci. Data, 7, 47–85, https://doi.org/10.5194/essd-7-47-2015, https://doi.org/10.5194/essd-7-47-2015, 2015
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Carbon dioxide (CO2) emissions from human activities (burning fossil fuels and cement production, deforestation and other land-use change) are set to rise again in 2014.
This study (updated yearly) makes an accurate assessment of anthropogenic CO2 emissions and their redistribution between the atmosphere, ocean, and terrestrial biosphere in order to better understand the global carbon cycle, support the development of climate policies, and project future climate change.
Y. Fang, C. Liu, and L. R. Leung
Geosci. Model Dev., 8, 781–789, https://doi.org/10.5194/gmd-8-781-2015, https://doi.org/10.5194/gmd-8-781-2015, 2015
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1. A gradient projection method was used to reduce the computation time of carbon-nitrogen spin-up processes in CLM4.
2. Point-scale simulations showed that the cyclic stability of total carbon for some cases differs from that of the periodic atmospheric forcing, and some cases even showed instability.
3. The instability issue is resolved after the hydrology scheme in CLM4 is replaced with a flow model for variably saturated porous media.
B. Bond-Lamberty, J. P. Fisk, J. A. Holm, V. Bailey, G. Bohrer, and C. M. Gough
Biogeosciences, 12, 513–526, https://doi.org/10.5194/bg-12-513-2015, https://doi.org/10.5194/bg-12-513-2015, 2015
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How will aging forests behave as they undergo ecological transitions? Can our models, which support scientific, policy, and management analyses, accurately simulate these transitions? We tested whether three forest ecosystem models could reproduce dynamics observed in an experimentally manipulated forest in northern Michigan, USA. None of the models fully captured the post-disturbance C fluxes observed, raising doubts about their ability to simulate tree death after moderate disturbances.
R. G. Knox, M. Longo, A. L. S. Swann, K. Zhang, N. M. Levine, P. R. Moorcroft, and R. L. Bras
Hydrol. Earth Syst. Sci., 19, 241–273, https://doi.org/10.5194/hess-19-241-2015, https://doi.org/10.5194/hess-19-241-2015, 2015
G. Hugelius, J. Strauss, S. Zubrzycki, J. W. Harden, E. A. G. Schuur, C.-L. Ping, L. Schirrmeister, G. Grosse, G. J. Michaelson, C. D. Koven, J. A. O'Donnell, B. Elberling, U. Mishra, P. Camill, Z. Yu, J. Palmtag, and P. Kuhry
Biogeosciences, 11, 6573–6593, https://doi.org/10.5194/bg-11-6573-2014, https://doi.org/10.5194/bg-11-6573-2014, 2014
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This study provides an updated estimate of organic carbon stored in the northern permafrost region. The study includes estimates for carbon in soils (0 to 3 m depth) and deeper sediments in river deltas and the Yedoma region. We find that field data is still scarce from many regions. Total estimated carbon storage is ~1300 Pg with an uncertainty range of between 1100 and 1500 Pg. Around 800 Pg carbon is perennially frozen, equivalent to all carbon dioxide currently in the Earth's atmosphere.
C. Zhao, Z. Hu, Y. Qian, L. Ruby Leung, J. Huang, M. Huang, J. Jin, M. G. Flanner, R. Zhang, H. Wang, H. Yan, Z. Lu, and D. G. Streets
Atmos. Chem. Phys., 14, 11475–11491, https://doi.org/10.5194/acp-14-11475-2014, https://doi.org/10.5194/acp-14-11475-2014, 2014
J. A. Holm, J. Q. Chambers, W. D. Collins, and N. Higuchi
Biogeosciences, 11, 5773–5794, https://doi.org/10.5194/bg-11-5773-2014, https://doi.org/10.5194/bg-11-5773-2014, 2014
J. A. Holm, K. Jardine, A. B. Guenther, J. Q. Chambers, and E. Tribuzy
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acpd-14-23995-2014, https://doi.org/10.5194/acpd-14-23995-2014, 2014
Revised manuscript not accepted
C. Le Quéré, G. P. Peters, R. J. Andres, R. M. Andrew, T. A. Boden, P. Ciais, P. Friedlingstein, R. A. Houghton, G. Marland, R. Moriarty, S. Sitch, P. Tans, A. Arneth, A. Arvanitis, D. C. E. Bakker, L. Bopp, J. G. Canadell, L. P. Chini, S. C. Doney, A. Harper, I. Harris, J. I. House, A. K. Jain, S. D. Jones, E. Kato, R. F. Keeling, K. Klein Goldewijk, A. Körtzinger, C. Koven, N. Lefèvre, F. Maignan, A. Omar, T. Ono, G.-H. Park, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. Schwinger, J. Segschneider, B. D. Stocker, T. Takahashi, B. Tilbrook, S. van Heuven, N. Viovy, R. Wanninkhof, A. Wiltshire, and S. Zaehle
Earth Syst. Sci. Data, 6, 235–263, https://doi.org/10.5194/essd-6-235-2014, https://doi.org/10.5194/essd-6-235-2014, 2014
T. K. Tesfa, H.-Y. Li, L. R. Leung, M. Huang, Y. Ke, Y. Sun, and Y. Liu
Geosci. Model Dev., 7, 947–963, https://doi.org/10.5194/gmd-7-947-2014, https://doi.org/10.5194/gmd-7-947-2014, 2014
J. Fan, L. R. Leung, P. J. DeMott, J. M. Comstock, B. Singh, D. Rosenfeld, J. M. Tomlinson, A. White, K. A. Prather, P. Minnis, J. K. Ayers, and Q. Min
Atmos. Chem. Phys., 14, 81–101, https://doi.org/10.5194/acp-14-81-2014, https://doi.org/10.5194/acp-14-81-2014, 2014
G. Hugelius, J. G. Bockheim, P. Camill, B. Elberling, G. Grosse, J. W. Harden, K. Johnson, T. Jorgenson, C. D. Koven, P. Kuhry, G. Michaelson, U. Mishra, J. Palmtag, C.-L. Ping, J. O'Donnell, L. Schirrmeister, E. A. G. Schuur, Y. Sheng, L. C. Smith, J. Strauss, and Z. Yu
Earth Syst. Sci. Data, 5, 393–402, https://doi.org/10.5194/essd-5-393-2013, https://doi.org/10.5194/essd-5-393-2013, 2013
R. G. Knox, M. Longo, A. L. S. Swann, K. Zhang, N. M. Levine, P. R. Moorcroft, and R. L. Bras
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hessd-10-15295-2013, https://doi.org/10.5194/hessd-10-15295-2013, 2013
Preprint withdrawn
Y. Sun, Z. Hou, M. Huang, F. Tian, and L. Ruby Leung
Hydrol. Earth Syst. Sci., 17, 4995–5011, https://doi.org/10.5194/hess-17-4995-2013, https://doi.org/10.5194/hess-17-4995-2013, 2013
K. N. Liou, Y. Gu, L. R. Leung, W. L. Lee, and R. G. Fovell
Atmos. Chem. Phys., 13, 11709–11721, https://doi.org/10.5194/acp-13-11709-2013, https://doi.org/10.5194/acp-13-11709-2013, 2013
N. Voisin, L. Liu, M. Hejazi, T. Tesfa, H. Li, M. Huang, Y. Liu, and L. R. Leung
Hydrol. Earth Syst. Sci., 17, 4555–4575, https://doi.org/10.5194/hess-17-4555-2013, https://doi.org/10.5194/hess-17-4555-2013, 2013
Y. Fang, M. Huang, C. Liu, H. Li, and L. R. Leung
Geosci. Model Dev., 6, 1977–1988, https://doi.org/10.5194/gmd-6-1977-2013, https://doi.org/10.5194/gmd-6-1977-2013, 2013
C. D. Koven, W. J. Riley, Z. M. Subin, J. Y. Tang, M. S. Torn, W. D. Collins, G. B. Bonan, D. M. Lawrence, and S. C. Swenson
Biogeosciences, 10, 7109–7131, https://doi.org/10.5194/bg-10-7109-2013, https://doi.org/10.5194/bg-10-7109-2013, 2013
C. Zhao, S. Chen, L. R. Leung, Y. Qian, J. F. Kok, R. A. Zaveri, and J. Huang
Atmos. Chem. Phys., 13, 10733–10753, https://doi.org/10.5194/acp-13-10733-2013, https://doi.org/10.5194/acp-13-10733-2013, 2013
N. Voisin, H. Li, D. Ward, M. Huang, M. Wigmosta, and L. R. Leung
Hydrol. Earth Syst. Sci., 17, 3605–3622, https://doi.org/10.5194/hess-17-3605-2013, https://doi.org/10.5194/hess-17-3605-2013, 2013
Y. Ke, L. R. Leung, M. Huang, and H. Li
Geosci. Model Dev., 6, 1609–1622, https://doi.org/10.5194/gmd-6-1609-2013, https://doi.org/10.5194/gmd-6-1609-2013, 2013
H. Wan, P. J. Rasch, K. Zhang, J. Kazil, and L. R. Leung
Geosci. Model Dev., 6, 861–874, https://doi.org/10.5194/gmd-6-861-2013, https://doi.org/10.5194/gmd-6-861-2013, 2013
J. Y. Tang, W. J. Riley, C. D. Koven, and Z. M. Subin
Geosci. Model Dev., 6, 127–140, https://doi.org/10.5194/gmd-6-127-2013, https://doi.org/10.5194/gmd-6-127-2013, 2013
Related subject area
Climate and Earth system modeling
Reduced floating-point precision in regional climate simulations: an ensemble-based statistical verification
TorchClim v1.0: a deep-learning plugin for climate model physics
Linking global terrestrial and ocean biogeochemistry with process-based, coupled freshwater algae–nutrient–solid dynamics in LM3-FANSY v1.0
Validating a microphysical prognostic stratospheric aerosol implementation in E3SMv2 using observations after the Mount Pinatubo eruption
Implementing detailed nucleation predictions in the Earth system model EC-Earth3.3.4: sulfuric acid–ammonia nucleation
Modeling biochar effects on soil organic carbon on croplands in a microbial decomposition model (MIMICS-BC_v1.0)
Hector V3.2.0: functionality and performance of a reduced-complexity climate model
Evaluation of CMIP6 model simulations of PM2.5 and its components over China
Assessment of a tiling energy budget approach in a land surface model, ORCHIDEE-MICT (r8205)
Multivariate adjustment of drizzle bias using machine learning in European climate projections
Development and evaluation of the interactive Model for Air Pollution and Land Ecosystems (iMAPLE) version 1.0
A perspective on the next generation of Earth system model scenarios: towards representative emission pathways (REPs)
Parallel SnowModel (v1.0): a parallel implementation of a distributed snow-evolution modeling system (SnowModel)
LB-SCAM: a learning-based method for efficient large-scale sensitivity analysis and tuning of the Single Column Atmosphere Model (SCAM)
Quantifying the impact of SST feedback frequency on Madden–Julian oscillation simulations
Systematic and objective evaluation of Earth system models: PCMDI Metrics Package (PMP) version 3
A revised model of global silicate weathering considering the influence of vegetation cover on erosion rate
A radiative–convective model computing precipitation with the maximum entropy production hypothesis
Leveraging regional mesh refinement to simulate future climate projections for California using the Simplified Convection-Permitting E3SM Atmosphere Model Version 0
Machine learning parameterization of the multi-scale Kain–Fritsch (MSKF) convection scheme and stable simulation coupled in the Weather Research and Forecasting (WRF) model using WRF–ML v1.0
Impacts of spatial heterogeneity of anthropogenic aerosol emissions in a regionally refined global aerosol–climate model
cfr (v2024.1.26): a Python package for climate field reconstruction
NEWTS1.0: Numerical model of coastal Erosion by Waves and Transgressive Scarps
Evaluation of isoprene emissions from the coupled model SURFEX–MEGANv2.1
A comprehensive Earth system model (AWI-ESM2.1) with interactive icebergs: effects on surface and deep-ocean characteristics
The regional climate–chemistry–ecology coupling model RegCM-Chem (v4.6)–YIBs (v1.0): development and application
An overview of cloud–radiation denial experiments for the Energy Exascale Earth System Model version 1
The computational and energy cost of simulation and storage for climate science: lessons from CMIP6
Subgrid-scale variability of cloud ice in the ICON-AES 1.3.00
INFERNO-peat v1.0.0: a representation of northern high-latitude peat fires in the JULES-INFERNO global fire model
The 4DEnVar-based weakly coupled land data assimilation system for E3SM version 2
Continental-scale bias-corrected climate and hydrological projections for Australia
G6-1.5K-SAI: a new Geoengineering Model Intercomparison Project (GeoMIP) experiment integrating recent advances in solar radiation modification studies
Modeling the effects of tropospheric ozone on the growth and yield of global staple crops with DSSAT v4.8.0
A one-dimensional urban flow model with an eddy-diffusivity mass-flux (EDMF) scheme and refined turbulent transport (MLUCM v3.0)
DCMIP2016: the tropical cyclone test case
Interactions between atmospheric composition and climate change – progress in understanding and future opportunities from AerChemMIP, PDRMIP, and RFMIP
Applying double-cropping and interactive irrigation in the North China Plain using WRF4.5
CD-type discretization for sea ice dynamics in FESOM version 2
Dynamic MJO forecasts using an ensemble subseasonal-to-seasonal forecast system of IAP-CAS model
CSDMS Data Components: data–model integration tools for Earth surface processes modeling
A generic algorithm to automatically classify urban fabric according to the local climate zone system: implementation in GeoClimate 0.0.1 and application to French cities
Modelling water isotopologues (1H2H16O, 1H217O) in the coupled numerical climate model iLOVECLIM (version 1.1.5)
Localized injections of interactive volcanic aerosols and their climate impacts in a simple general circulation model
CICERO Simple Climate Model (CICERO-SCM v1.1.1) – an improved simple climate model with a parameter calibration tool
Accurate assessment of land–atmosphere coupling in climate models requires high-frequency data output
Towards variance-conserving reconstructions of climate indices with Gaussian process regression in an embedding space
A diatom extension to the cGEnIE Earth system model – EcoGEnIE 1.1
Carbon isotopes in the marine biogeochemistry model FESOM2.1-REcoM3
Flux coupling approach on an exchange grid for the IOW Earth System Model (version 1.04.00) of the Baltic Sea region
Hugo Banderier, Christian Zeman, David Leutwyler, Stefan Rüdisühli, and Christoph Schär
Geosci. Model Dev., 17, 5573–5586, https://doi.org/10.5194/gmd-17-5573-2024, https://doi.org/10.5194/gmd-17-5573-2024, 2024
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We investigate the effects of reduced-precision arithmetic in a state-of-the-art regional climate model by studying the results of 10-year-long simulations. After this time, the results of the reduced precision and the standard implementation are hardly different. This should encourage the use of reduced precision in climate models to exploit the speedup and memory savings it brings. The methodology used in this work can help researchers verify reduced-precision implementations of their model.
David Fuchs, Steven C. Sherwood, Abhnil Prasad, Kirill Trapeznikov, and Jim Gimlett
Geosci. Model Dev., 17, 5459–5475, https://doi.org/10.5194/gmd-17-5459-2024, https://doi.org/10.5194/gmd-17-5459-2024, 2024
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Machine learning (ML) of unresolved processes offers many new possibilities for improving weather and climate models, but integrating ML into the models has been an engineering challenge, and there are performance issues. We present a new software plugin for this integration, TorchClim, that is scalable and flexible and thereby allows a new level of experimentation with the ML approach. We also provide guidance on ML training and demonstrate a skillful hybrid ML atmosphere model.
Minjin Lee, Charles A. Stock, John P. Dunne, and Elena Shevliakova
Geosci. Model Dev., 17, 5191–5224, https://doi.org/10.5194/gmd-17-5191-2024, https://doi.org/10.5194/gmd-17-5191-2024, 2024
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Modeling global freshwater solid and nutrient loads, in both magnitude and form, is imperative for understanding emerging eutrophication problems. Such efforts, however, have been challenged by the difficulty of balancing details of freshwater biogeochemical processes with limited knowledge, input, and validation datasets. Here we develop a global freshwater model that resolves intertwined algae, solid, and nutrient dynamics and provide performance assessment against measurement-based estimates.
Hunter York Brown, Benjamin Wagman, Diana Bull, Kara Peterson, Benjamin Hillman, Xiaohong Liu, Ziming Ke, and Lin Lin
Geosci. Model Dev., 17, 5087–5121, https://doi.org/10.5194/gmd-17-5087-2024, https://doi.org/10.5194/gmd-17-5087-2024, 2024
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Explosive volcanic eruptions lead to long-lived, microscopic particles in the upper atmosphere which act to cool the Earth's surface by reflecting the Sun's light back to space. We include and test this process in a global climate model, E3SM. E3SM is tested against satellite and balloon observations of the 1991 eruption of Mt. Pinatubo, showing that with these particles in the model we reasonably recreate Pinatubo and its global effects. We also explore how particle size leads to these effects.
Carl Svenhag, Moa K. Sporre, Tinja Olenius, Daniel Yazgi, Sara M. Blichner, Lars P. Nieradzik, and Pontus Roldin
Geosci. Model Dev., 17, 4923–4942, https://doi.org/10.5194/gmd-17-4923-2024, https://doi.org/10.5194/gmd-17-4923-2024, 2024
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Our research shows the importance of modeling new particle formation (NPF) and growth of particles in the atmosphere on a global scale, as they influence the outcomes of clouds and our climate. With the global model EC-Earth3 we show that using a new method for NPF modeling, which includes new detailed processes with NH3 and H2SO4, significantly impacts the number of particles in the air and clouds and changes the radiation balance of the same magnitude as anthropogenic greenhouse emissions.
Mengjie Han, Qing Zhao, Xili Wang, Ying-Ping Wang, Philippe Ciais, Haicheng Zhang, Daniel S. Goll, Lei Zhu, Zhe Zhao, Zhixuan Guo, Chen Wang, Wei Zhuang, Fengchang Wu, and Wei Li
Geosci. Model Dev., 17, 4871–4890, https://doi.org/10.5194/gmd-17-4871-2024, https://doi.org/10.5194/gmd-17-4871-2024, 2024
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The impact of biochar (BC) on soil organic carbon (SOC) dynamics is not represented in most land carbon models used for assessing land-based climate change mitigation. Our study develops a BC model that incorporates our current understanding of BC effects on SOC based on a soil carbon model (MIMICS). The BC model can reproduce the SOC changes after adding BC, providing a useful tool to couple dynamic land models to evaluate the effectiveness of BC application for CO2 removal from the atmosphere.
Kalyn Dorheim, Skylar Gering, Robert Gieseke, Corinne Hartin, Leeya Pressburger, Alexey N. Shiklomanov, Steven J. Smith, Claudia Tebaldi, Dawn L. Woodard, and Ben Bond-Lamberty
Geosci. Model Dev., 17, 4855–4869, https://doi.org/10.5194/gmd-17-4855-2024, https://doi.org/10.5194/gmd-17-4855-2024, 2024
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Hector is an easy-to-use, global climate–carbon cycle model. With its quick run time, Hector can provide climate information from a run in a fraction of a second. Hector models on a global and annual basis. Here, we present an updated version of the model, Hector V3. In this paper, we document Hector’s new features. Hector V3 is capable of reproducing historical observations, and its future temperature projections are consistent with those of more complex models.
Fangxuan Ren, Jintai Lin, Chenghao Xu, Jamiu A. Adeniran, Jingxu Wang, Randall V. Martin, Aaron van Donkelaar, Melanie S. Hammer, Larry W. Horowitz, Steven T. Turnock, Naga Oshima, Jie Zhang, Susanne Bauer, Kostas Tsigaridis, Øyvind Seland, Pierre Nabat, David Neubauer, Gary Strand, Twan van Noije, Philippe Le Sager, and Toshihiko Takemura
Geosci. Model Dev., 17, 4821–4836, https://doi.org/10.5194/gmd-17-4821-2024, https://doi.org/10.5194/gmd-17-4821-2024, 2024
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We evaluate the performance of 14 CMIP6 ESMs in simulating total PM2.5 and its 5 components over China during 2000–2014. PM2.5 and its components are underestimated in almost all models, except that black carbon (BC) and sulfate are overestimated in two models, respectively. The underestimation is the largest for organic carbon (OC) and the smallest for BC. Models reproduce the observed spatial pattern for OC, sulfate, nitrate and ammonium well, yet the agreement is poorer for BC.
Yi Xi, Chunjing Qiu, Yuan Zhang, Dan Zhu, Shushi Peng, Gustaf Hugelius, Jinfeng Chang, Elodie Salmon, and Philippe Ciais
Geosci. Model Dev., 17, 4727–4754, https://doi.org/10.5194/gmd-17-4727-2024, https://doi.org/10.5194/gmd-17-4727-2024, 2024
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The ORCHIDEE-MICT model can simulate the carbon cycle and hydrology at a sub-grid scale but energy budgets only at a grid scale. This paper assessed the implementation of a multi-tiling energy budget approach in ORCHIDEE-MICT and found warmer surface and soil temperatures, higher soil moisture, and more soil organic carbon across the Northern Hemisphere compared with the original version.
Georgia Lazoglou, Theo Economou, Christina Anagnostopoulou, George Zittis, Anna Tzyrkalli, Pantelis Georgiades, and Jos Lelieveld
Geosci. Model Dev., 17, 4689–4703, https://doi.org/10.5194/gmd-17-4689-2024, https://doi.org/10.5194/gmd-17-4689-2024, 2024
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This study focuses on the important issue of the drizzle bias effect in regional climate models, described by an over-prediction of the number of rainy days while underestimating associated precipitation amounts. For this purpose, two distinct methodologies are applied and rigorously evaluated. These results are encouraging for using the multivariate machine learning method random forest to increase the accuracy of climate models concerning the projection of the number of wet days.
Xu Yue, Hao Zhou, Chenguang Tian, Yimian Ma, Yihan Hu, Cheng Gong, Hui Zheng, and Hong Liao
Geosci. Model Dev., 17, 4621–4642, https://doi.org/10.5194/gmd-17-4621-2024, https://doi.org/10.5194/gmd-17-4621-2024, 2024
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We develop the interactive Model for Air Pollution and Land Ecosystems (iMAPLE). The model considers the full coupling between carbon and water cycles, dynamic fire emissions, wetland methane emissions, biogenic volatile organic compound emissions, and trait-based ozone vegetation damage. Evaluations show that iMAPLE is a useful tool for the study of the interactions among climate, chemistry, and ecosystems.
Malte Meinshausen, Carl-Friedrich Schleussner, Kathleen Beyer, Greg Bodeker, Olivier Boucher, Josep G. Canadell, John S. Daniel, Aïda Diongue-Niang, Fatima Driouech, Erich Fischer, Piers Forster, Michael Grose, Gerrit Hansen, Zeke Hausfather, Tatiana Ilyina, Jarmo S. Kikstra, Joyce Kimutai, Andrew D. King, June-Yi Lee, Chris Lennard, Tabea Lissner, Alexander Nauels, Glen P. Peters, Anna Pirani, Gian-Kasper Plattner, Hans Pörtner, Joeri Rogelj, Maisa Rojas, Joyashree Roy, Bjørn H. Samset, Benjamin M. Sanderson, Roland Séférian, Sonia Seneviratne, Christopher J. Smith, Sophie Szopa, Adelle Thomas, Diana Urge-Vorsatz, Guus J. M. Velders, Tokuta Yokohata, Tilo Ziehn, and Zebedee Nicholls
Geosci. Model Dev., 17, 4533–4559, https://doi.org/10.5194/gmd-17-4533-2024, https://doi.org/10.5194/gmd-17-4533-2024, 2024
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The scientific community is considering new scenarios to succeed RCPs and SSPs for the next generation of Earth system model runs to project future climate change. To contribute to that effort, we reflect on relevant policy and scientific research questions and suggest categories for representative emission pathways. These categories are tailored to the Paris Agreement long-term temperature goal, high-risk outcomes in the absence of further climate policy and worlds “that could have been”.
Ross Mower, Ethan D. Gutmann, Glen E. Liston, Jessica Lundquist, and Soren Rasmussen
Geosci. Model Dev., 17, 4135–4154, https://doi.org/10.5194/gmd-17-4135-2024, https://doi.org/10.5194/gmd-17-4135-2024, 2024
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Higher-resolution model simulations are better at capturing winter snowpack changes across space and time. However, increasing resolution also increases the computational requirements. This work provides an overview of changes made to a distributed snow-evolution modeling system (SnowModel) to allow it to leverage high-performance computing resources. Continental simulations that were previously estimated to take 120 d can now be performed in 5 h.
Jiaxu Guo, Juepeng Zheng, Yidan Xu, Haohuan Fu, Wei Xue, Lanning Wang, Lin Gan, Ping Gao, Wubing Wan, Xianwei Wu, Zhitao Zhang, Liang Hu, Gaochao Xu, and Xilong Che
Geosci. Model Dev., 17, 3975–3992, https://doi.org/10.5194/gmd-17-3975-2024, https://doi.org/10.5194/gmd-17-3975-2024, 2024
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To enhance the efficiency of experiments using SCAM, we train a learning-based surrogate model to facilitate large-scale sensitivity analysis and tuning of combinations of multiple parameters. Employing a hybrid method, we investigate the joint sensitivity of multi-parameter combinations across typical cases, identifying the most sensitive three-parameter combination out of 11. Subsequently, we conduct a tuning process aimed at reducing output errors in these cases.
Yung-Yao Lan, Huang-Hsiung Hsu, and Wan-Ling Tseng
Geosci. Model Dev., 17, 3897–3918, https://doi.org/10.5194/gmd-17-3897-2024, https://doi.org/10.5194/gmd-17-3897-2024, 2024
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This study uses the CAM5–SIT coupled model to investigate the effects of SST feedback frequency on the MJO simulations with intervals at 30 min, 1, 3, 6, 12, 18, 24, and 30 d. The simulations become increasingly unrealistic as the frequency of the SST feedback decreases. Our results suggest that more spontaneous air--sea interaction (e.g., ocean response within 3 d in this study) with high vertical resolution in the ocean model is key to the realistic simulation of the MJO.
Jiwoo Lee, Peter J. Gleckler, Min-Seop Ahn, Ana Ordonez, Paul A. Ullrich, Kenneth R. Sperber, Karl E. Taylor, Yann Y. Planton, Eric Guilyardi, Paul Durack, Celine Bonfils, Mark D. Zelinka, Li-Wei Chao, Bo Dong, Charles Doutriaux, Chengzhu Zhang, Tom Vo, Jason Boutte, Michael F. Wehner, Angeline G. Pendergrass, Daehyun Kim, Zeyu Xue, Andrew T. Wittenberg, and John Krasting
Geosci. Model Dev., 17, 3919–3948, https://doi.org/10.5194/gmd-17-3919-2024, https://doi.org/10.5194/gmd-17-3919-2024, 2024
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We introduce an open-source software, the PCMDI Metrics Package (PMP), developed for a comprehensive comparison of Earth system models (ESMs) with real-world observations. Using diverse metrics evaluating climatology, variability, and extremes simulated in thousands of simulations from the Coupled Model Intercomparison Project (CMIP), PMP aids in benchmarking model improvements across generations. PMP also enables efficient tracking of performance evolutions during ESM developments.
Haoyue Zuo, Yonggang Liu, Gaojun Li, Zhifang Xu, Liang Zhao, Zhengtang Guo, and Yongyun Hu
Geosci. Model Dev., 17, 3949–3974, https://doi.org/10.5194/gmd-17-3949-2024, https://doi.org/10.5194/gmd-17-3949-2024, 2024
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Compared to the silicate weathering fluxes measured at large river basins, the current models tend to systematically overestimate the fluxes over the tropical region, which leads to an overestimation of the global total weathering flux. The most possible cause of such bias is found to be the overestimation of tropical surface erosion, which indicates that the tropical vegetation likely slows down physical erosion significantly. We propose a way of taking this effect into account in models.
Quentin Pikeroen, Didier Paillard, and Karine Watrin
Geosci. Model Dev., 17, 3801–3814, https://doi.org/10.5194/gmd-17-3801-2024, https://doi.org/10.5194/gmd-17-3801-2024, 2024
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All accurate climate models use equations with poorly defined parameters, where knobs for the parameters are turned to fit the observations. This process is called tuning. In this article, we use another paradigm. We use a thermodynamic hypothesis, the maximum entropy production, to compute temperatures, energy fluxes, and precipitation, where tuning is impossible. For now, the 1D vertical model is used for a tropical atmosphere. The correct order of magnitude of precipitation is computed.
Jishi Zhang, Peter Bogenschutz, Qi Tang, Philip Cameron-smith, and Chengzhu Zhang
Geosci. Model Dev., 17, 3687–3731, https://doi.org/10.5194/gmd-17-3687-2024, https://doi.org/10.5194/gmd-17-3687-2024, 2024
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We developed a regionally refined climate model that allows resolved convection and performed a 20-year projection to the end of the century. The model has a resolution of 3.25 km in California, which allows us to predict climate with unprecedented accuracy, and a resolution of 100 km for the rest of the globe to achieve efficient, self-consistent simulations. The model produces superior results in reproducing climate patterns over California that typical modern climate models cannot resolve.
Xiaohui Zhong, Xing Yu, and Hao Li
Geosci. Model Dev., 17, 3667–3685, https://doi.org/10.5194/gmd-17-3667-2024, https://doi.org/10.5194/gmd-17-3667-2024, 2024
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In order to forecast localized warm-sector rainfall in the south China region, numerical weather prediction models are being run with finer grid spacing. The conventional convection parameterization (CP) performs poorly in the gray zone, necessitating the development of a scale-aware scheme. We propose a machine learning (ML) model to replace the scale-aware CP scheme. Evaluation against the original CP scheme has shown that the ML-based CP scheme can provide accurate and reliable predictions.
Taufiq Hassan, Kai Zhang, Jianfeng Li, Balwinder Singh, Shixuan Zhang, Hailong Wang, and Po-Lun Ma
Geosci. Model Dev., 17, 3507–3532, https://doi.org/10.5194/gmd-17-3507-2024, https://doi.org/10.5194/gmd-17-3507-2024, 2024
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Anthropogenic aerosol emissions are an essential part of global aerosol models. Significant errors can exist from the loss of emission heterogeneity. We introduced an emission treatment that significantly improved aerosol emission heterogeneity in high-resolution model simulations, with improvements in simulated aerosol surface concentrations. The emission treatment will provide a more accurate representation of aerosol emissions and their effects on climate.
Feng Zhu, Julien Emile-Geay, Gregory J. Hakim, Dominique Guillot, Deborah Khider, Robert Tardif, and Walter A. Perkins
Geosci. Model Dev., 17, 3409–3431, https://doi.org/10.5194/gmd-17-3409-2024, https://doi.org/10.5194/gmd-17-3409-2024, 2024
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Climate field reconstruction encompasses methods that estimate the evolution of climate in space and time based on natural archives. It is useful to investigate climate variations and validate climate models, but its implementation and use can be difficult for non-experts. This paper introduces a user-friendly Python package called cfr to make these methods more accessible, thanks to the computational and visualization tools that facilitate efficient and reproducible research on past climates.
Rose V. Palermo, J. Taylor Perron, Jason M. Soderblom, Samuel P. D. Birch, Alexander G. Hayes, and Andrew D. Ashton
Geosci. Model Dev., 17, 3433–3445, https://doi.org/10.5194/gmd-17-3433-2024, https://doi.org/10.5194/gmd-17-3433-2024, 2024
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Models of rocky coastal erosion help us understand the controls on coastal morphology and evolution. In this paper, we present a simplified model of coastline erosion driven by either uniform erosion where coastline erosion is constant or wave-driven erosion where coastline erosion is a function of the wave power. This model can be used to evaluate how coastline changes reflect climate, sea-level history, material properties, and the relative influence of different erosional processes.
Safae Oumami, Joaquim Arteta, Vincent Guidard, Pierre Tulet, and Paul David Hamer
Geosci. Model Dev., 17, 3385–3408, https://doi.org/10.5194/gmd-17-3385-2024, https://doi.org/10.5194/gmd-17-3385-2024, 2024
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In this paper, we coupled the SURFEX and MEGAN models. The aim of this coupling is to improve the estimation of biogenic fluxes by using the SURFEX canopy environment model. The coupled model results were validated and several sensitivity tests were performed. The coupled-model total annual isoprene flux is 442 Tg; this value is within the range of other isoprene estimates reported. The ultimate aim of this coupling is to predict the impact of climate change on biogenic emissions.
Lars Ackermann, Thomas Rackow, Kai Himstedt, Paul Gierz, Gregor Knorr, and Gerrit Lohmann
Geosci. Model Dev., 17, 3279–3301, https://doi.org/10.5194/gmd-17-3279-2024, https://doi.org/10.5194/gmd-17-3279-2024, 2024
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We present long-term simulations with interactive icebergs in the Southern Ocean. By melting, icebergs reduce the temperature and salinity of the surrounding ocean. In our simulations, we find that this cooling effect of iceberg melting is not limited to the surface ocean but also reaches the deep ocean and propagates northward into all ocean basins. Additionally, the formation of deep-water masses in the Southern Ocean is enhanced.
Nanhong Xie, Tijian Wang, Xiaodong Xie, Xu Yue, Filippo Giorgi, Qian Zhang, Danyang Ma, Rong Song, Beiyao Xu, Shu Li, Bingliang Zhuang, Mengmeng Li, Min Xie, Natalya Andreeva Kilifarska, Georgi Gadzhev, and Reneta Dimitrova
Geosci. Model Dev., 17, 3259–3277, https://doi.org/10.5194/gmd-17-3259-2024, https://doi.org/10.5194/gmd-17-3259-2024, 2024
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For the first time, we coupled a regional climate chemistry model, RegCM-Chem, with a dynamic vegetation model, YIBs, to create a regional climate–chemistry–ecology model, RegCM-Chem–YIBs. We applied it to simulate climatic, chemical, and ecological parameters in East Asia and fully validated it on a variety of observational data. Results show that RegCM-Chem–YIBs model is a valuable tool for studying the terrestrial carbon cycle, atmospheric chemistry, and climate change on a regional scale.
Bryce E. Harrop, Jian Lu, L. Ruby Leung, William K. M. Lau, Kyu-Myong Kim, Brian Medeiros, Brian J. Soden, Gabriel A. Vecchi, Bosong Zhang, and Balwinder Singh
Geosci. Model Dev., 17, 3111–3135, https://doi.org/10.5194/gmd-17-3111-2024, https://doi.org/10.5194/gmd-17-3111-2024, 2024
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Seven new experimental setups designed to interfere with cloud radiative heating have been added to the Energy Exascale Earth System Model (E3SM). These experiments include both those that test the mean impact of cloud radiative heating and those examining its covariance with circulations. This paper documents the code changes and steps needed to run these experiments. Results corroborate prior findings for how cloud radiative heating impacts circulations and rainfall patterns.
Mario C. Acosta, Sergi Palomas, Stella V. Paronuzzi Ticco, Gladys Utrera, Joachim Biercamp, Pierre-Antoine Bretonniere, Reinhard Budich, Miguel Castrillo, Arnaud Caubel, Francisco Doblas-Reyes, Italo Epicoco, Uwe Fladrich, Sylvie Joussaume, Alok Kumar Gupta, Bryan Lawrence, Philippe Le Sager, Grenville Lister, Marie-Pierre Moine, Jean-Christophe Rioual, Sophie Valcke, Niki Zadeh, and Venkatramani Balaji
Geosci. Model Dev., 17, 3081–3098, https://doi.org/10.5194/gmd-17-3081-2024, https://doi.org/10.5194/gmd-17-3081-2024, 2024
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We present a collection of performance metrics gathered during the Coupled Model Intercomparison Project Phase 6 (CMIP6), a worldwide initiative to study climate change. We analyse the metrics that resulted from collaboration efforts among many partners and models and describe our findings to demonstrate the utility of our study for the scientific community. The research contributes to understanding climate modelling performance on the current high-performance computing (HPC) architectures.
Sabine Doktorowski, Jan Kretzschmar, Johannes Quaas, Marc Salzmann, and Odran Sourdeval
Geosci. Model Dev., 17, 3099–3110, https://doi.org/10.5194/gmd-17-3099-2024, https://doi.org/10.5194/gmd-17-3099-2024, 2024
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Especially over the midlatitudes, precipitation is mainly formed via the ice phase. In this study we focus on the initial snow formation process in the ICON-AES, the aggregation process. We use a stochastical approach for the aggregation parameterization and investigate the influence in the ICON-AES. Therefore, a distribution function of cloud ice is created, which is evaluated with satellite data. The new approach leads to cloud ice loss and an improvement in the process rate bias.
Katie R. Blackford, Matthew Kasoar, Chantelle Burton, Eleanor Burke, Iain Colin Prentice, and Apostolos Voulgarakis
Geosci. Model Dev., 17, 3063–3079, https://doi.org/10.5194/gmd-17-3063-2024, https://doi.org/10.5194/gmd-17-3063-2024, 2024
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Peatlands are globally important stores of carbon which are being increasingly threatened by wildfires with knock-on effects on the climate system. Here we introduce a novel peat fire parameterization in the northern high latitudes to the INFERNO global fire model. Representing peat fires increases annual burnt area across the high latitudes, alongside improvements in how we capture year-to-year variation in burning and emissions.
Pengfei Shi, L. Ruby Leung, Bin Wang, Kai Zhang, Samson M. Hagos, and Shixuan Zhang
Geosci. Model Dev., 17, 3025–3040, https://doi.org/10.5194/gmd-17-3025-2024, https://doi.org/10.5194/gmd-17-3025-2024, 2024
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Improving climate predictions have profound socio-economic impacts. This study introduces a new weakly coupled land data assimilation (WCLDA) system for a coupled climate model. We demonstrate improved simulation of soil moisture and temperature in many global regions and throughout the soil layers. Furthermore, significant improvements are also found in reproducing the time evolution of the 2012 US Midwest drought. The WCLDA system provides the groundwork for future predictability studies.
Justin Peter, Elisabeth Vogel, Wendy Sharples, Ulrike Bende-Michl, Louise Wilson, Pandora Hope, Andrew Dowdy, Greg Kociuba, Sri Srikanthan, Vi Co Duong, Jake Roussis, Vjekoslav Matic, Zaved Khan, Alison Oke, Margot Turner, Stuart Baron-Hay, Fiona Johnson, Raj Mehrotra, Ashish Sharma, Marcus Thatcher, Ali Azarvinand, Steven Thomas, Ghyslaine Boschat, Chantal Donnelly, and Robert Argent
Geosci. Model Dev., 17, 2755–2781, https://doi.org/10.5194/gmd-17-2755-2024, https://doi.org/10.5194/gmd-17-2755-2024, 2024
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We detail the production of datasets and communication to end users of high-resolution projections of rainfall, runoff, and soil moisture for the entire Australian continent. This is important as previous projections for Australia were for small regions and used differing techniques for their projections, making comparisons difficult across Australia's varied climate zones. The data will be beneficial for research purposes and to aid adaptation to climate change.
Daniele Visioni, Alan Robock, Jim Haywood, Matthew Henry, Simone Tilmes, Douglas G. MacMartin, Ben Kravitz, Sarah J. Doherty, John Moore, Chris Lennard, Shingo Watanabe, Helene Muri, Ulrike Niemeier, Olivier Boucher, Abu Syed, Temitope S. Egbebiyi, Roland Séférian, and Ilaria Quaglia
Geosci. Model Dev., 17, 2583–2596, https://doi.org/10.5194/gmd-17-2583-2024, https://doi.org/10.5194/gmd-17-2583-2024, 2024
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This paper describes a new experimental protocol for the Geoengineering Model Intercomparison Project (GeoMIP). In it, we describe the details of a new simulation of sunlight reflection using the stratospheric aerosols that climate models are supposed to run, and we explain the reasons behind each choice we made when defining the protocol.
Jose Rafael Guarin, Jonas Jägermeyr, Elizabeth A. Ainsworth, Fabio A. A. Oliveira, Senthold Asseng, Kenneth Boote, Joshua Elliott, Lisa Emberson, Ian Foster, Gerrit Hoogenboom, David Kelly, Alex C. Ruane, and Katrina Sharps
Geosci. Model Dev., 17, 2547–2567, https://doi.org/10.5194/gmd-17-2547-2024, https://doi.org/10.5194/gmd-17-2547-2024, 2024
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The effects of ozone (O3) stress on crop photosynthesis and leaf senescence were added to maize, rice, soybean, and wheat crop models. The modified models reproduced growth and yields under different O3 levels measured in field experiments and reported in the literature. The combined interactions between O3 and additional stresses were reproduced with the new models. These updated crop models can be used to simulate impacts of O3 stress under future climate change and air pollution scenarios.
Jiachen Lu, Negin Nazarian, Melissa Anne Hart, E. Scott Krayenhoff, and Alberto Martilli
Geosci. Model Dev., 17, 2525–2545, https://doi.org/10.5194/gmd-17-2525-2024, https://doi.org/10.5194/gmd-17-2525-2024, 2024
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This study enhances urban canopy models by refining key assumptions. Simulations for various urban scenarios indicate discrepancies in turbulent transport efficiency for flow properties. We propose two modifications that involve characterizing diffusion coefficients for momentum and turbulent kinetic energy separately and introducing a physics-based
mass-fluxterm. These adjustments enhance the model's performance, offering more reliable temperature and surface flux estimates.
Justin L. Willson, Kevin A. Reed, Christiane Jablonowski, James Kent, Peter H. Lauritzen, Ramachandran Nair, Mark A. Taylor, Paul A. Ullrich, Colin M. Zarzycki, David M. Hall, Don Dazlich, Ross Heikes, Celal Konor, David Randall, Thomas Dubos, Yann Meurdesoif, Xi Chen, Lucas Harris, Christian Kühnlein, Vivian Lee, Abdessamad Qaddouri, Claude Girard, Marco Giorgetta, Daniel Reinert, Hiroaki Miura, Tomoki Ohno, and Ryuji Yoshida
Geosci. Model Dev., 17, 2493–2507, https://doi.org/10.5194/gmd-17-2493-2024, https://doi.org/10.5194/gmd-17-2493-2024, 2024
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Accurate simulation of tropical cyclones (TCs) is essential to understanding their behavior in a changing climate. One way this is accomplished is through model intercomparison projects, where results from multiple climate models are analyzed to provide benchmark solutions for the wider climate modeling community. This study describes and analyzes the previously developed TC test case for nine climate models in an intercomparison project, providing solutions that aid in model development.
Stephanie Fiedler, Vaishali Naik, Fiona M. O'Connor, Christopher J. Smith, Paul Griffiths, Ryan J. Kramer, Toshihiko Takemura, Robert J. Allen, Ulas Im, Matthew Kasoar, Angshuman Modak, Steven Turnock, Apostolos Voulgarakis, Duncan Watson-Parris, Daniel M. Westervelt, Laura J. Wilcox, Alcide Zhao, William J. Collins, Michael Schulz, Gunnar Myhre, and Piers M. Forster
Geosci. Model Dev., 17, 2387–2417, https://doi.org/10.5194/gmd-17-2387-2024, https://doi.org/10.5194/gmd-17-2387-2024, 2024
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Climate scientists want to better understand modern climate change. Thus, climate model experiments are performed and compared. The results of climate model experiments differ, as assessed in the latest Intergovernmental Panel on Climate Change (IPCC) assessment report. This article gives insights into the challenges and outlines opportunities for further improving the understanding of climate change. It is based on views of a group of experts in atmospheric composition–climate interactions.
Yuwen Fan, Zhao Yang, Min-Hui Lo, Jina Hur, and Eun-Soon Im
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-38, https://doi.org/10.5194/gmd-2024-38, 2024
Revised manuscript accepted for GMD
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Irrigated agriculture in the North China Plain (NCP) has a significant impact on the local climate. To better understand this impact, we developed a specialized model specifically for the NCP region. This model allows us to simulate the double-cropping vegetation and the dynamic irrigation practices that are commonly employed in the NCP. This model shows improved performance in capturing the general crop growth, such as crop stages, biomass, crop yield, and vegetation greenness.
Sergey Danilov, Carolin Mehlmann, Dmitry Sidorenko, and Qiang Wang
Geosci. Model Dev., 17, 2287–2297, https://doi.org/10.5194/gmd-17-2287-2024, https://doi.org/10.5194/gmd-17-2287-2024, 2024
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Sea ice models are a necessary component of climate models. At very high resolution they are capable of simulating linear kinematic features, such as leads, which are important for better prediction of heat exchanges between the ocean and atmosphere. Two new discretizations are described which improve the sea ice component of the Finite volumE Sea ice–Ocean Model (FESOM version 2) by allowing simulations of finer scales.
Yangke Liu, Qing Bao, Bian He, Xiaofei Wu, Jing Yang, Yimin Liu, Guoxiong Wu, Tao Zhu, Siyuan Zhou, Yao Tang, Ankang Qu, Yalan Fan, Anling Liu, Dandan Chen, Zhaoming Luo, Xing Hu, and Tongwen Wu
EGUsphere, https://doi.org/10.5194/egusphere-2024-1, https://doi.org/10.5194/egusphere-2024-1, 2024
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This article gives an overview introduction of the IAP-CAS S2S (sub-seasonal to seasonal) ensemble forecasting system and MJO forecast evaluation of the system. Compared to other S2S models, the IAP-CAS model has its advantages but also exhibits some biases, including underdispersive ensemble, overestimated amplitude and faster propagation speed when forecasting MJO. We also provide the explanation towards these biases and prospects for further improvement of this system in the future.
Tian Gan, Gregory E. Tucker, Eric W. H. Hutton, Mark D. Piper, Irina Overeem, Albert J. Kettner, Benjamin Campforts, Julia M. Moriarty, Brianna Undzis, Ethan Pierce, and Lynn McCready
Geosci. Model Dev., 17, 2165–2185, https://doi.org/10.5194/gmd-17-2165-2024, https://doi.org/10.5194/gmd-17-2165-2024, 2024
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This study presents the design, implementation, and application of the CSDMS Data Components. The case studies demonstrate that the Data Components provide a consistent way to access heterogeneous datasets from multiple sources, and to seamlessly integrate them with various models for Earth surface process modeling. The Data Components support the creation of open data–model integration workflows to improve the research transparency and reproducibility.
Jérémy Bernard, Erwan Bocher, Matthieu Gousseff, François Leconte, and Elisabeth Le Saux Wiederhold
Geosci. Model Dev., 17, 2077–2116, https://doi.org/10.5194/gmd-17-2077-2024, https://doi.org/10.5194/gmd-17-2077-2024, 2024
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Geographical features may have a considerable effect on local climate. The local climate zone (LCZ) system proposed by Stewart and Oke (2012) is seen as a standard approach for classifying any zone according to a set of geographic indicators. While many methods already exist to map the LCZ, only a few tools are openly and freely available. We present the algorithm implemented in GeoClimate software to identify the LCZ of any place in the world using OpenStreetMap data.
Thomas Extier, Thibaut Caley, and Didier M. Roche
Geosci. Model Dev., 17, 2117–2139, https://doi.org/10.5194/gmd-17-2117-2024, https://doi.org/10.5194/gmd-17-2117-2024, 2024
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Stable water isotopes are used to infer changes in the hydrological cycle for different time periods in climatic archive and climate models. We present the implementation of the δ2H and δ17O water isotopes in the coupled climate model iLOVECLIM and calculate the d- and 17O-excess. Results of a simulation under preindustrial conditions show that the model correctly reproduces the water isotope distribution in the atmosphere and ocean in comparison to data and other global circulation models.
Joseph P. Hollowed, Christiane Jablonowski, Hunter Y. Brown, Benjamin R. Hillman, Diana L. Bull, and Joseph L. Hart
EGUsphere, https://doi.org/10.5194/egusphere-2024-335, https://doi.org/10.5194/egusphere-2024-335, 2024
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Large volcanic eruptions deposit material into the upper-atmosphere, which is capable of altering temperature and wind patterns of the Earth's atmosphere for years following. This research describes a new method of simulating these effects in an idealized, efficient atmospheric model. A volcanic eruption of sulfur dioxide is described with a simplified set of physical rules, which eventually cools the planetary surface. This model has been designed as a testbed for climate attribution studies.
Marit Sandstad, Borgar Aamaas, Ane Nordlie Johansen, Marianne Tronstad Lund, Glen Peters, Bjørn Hallvard Samset, Benjamin M. Sanderson, and Ragnhild Bieltvedt Skeie
EGUsphere, https://doi.org/10.5194/egusphere-2024-196, https://doi.org/10.5194/egusphere-2024-196, 2024
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The CICERO-SCM has existed as a FORTRAN model since 1999 and consists of a part that calculates radiative forcing and concentrations from emissions, and an upwelling diffusion energy balance model of the ocean that calculates temperature change. In this paper we describe an updated version ported to python and publicly available at https://github.com/ciceroOslo/ciceroscm (https://doi.org/10.5281/zenodo.10548720). This version contains functionality for parallel runs and automatic calibration.
Kirsten L. Findell, Zun Yin, Eunkyo Seo, Paul A. Dirmeyer, Nathan P. Arnold, Nathaniel Chaney, Megan D. Fowler, Meng Huang, David M. Lawrence, Po-Lun Ma, and Joseph A. Santanello Jr.
Geosci. Model Dev., 17, 1869–1883, https://doi.org/10.5194/gmd-17-1869-2024, https://doi.org/10.5194/gmd-17-1869-2024, 2024
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We outline a request for sub-daily data to accurately capture the process-level connections between land states, surface fluxes, and the boundary layer response. This high-frequency model output will allow for more direct comparison with observational field campaigns on process-relevant timescales, enable demonstration of inter-model spread in land–atmosphere coupling processes, and aid in targeted identification of sources of deficiencies and opportunities for improvement of the models.
Marlene Klockmann, Udo von Toussaint, and Eduardo Zorita
Geosci. Model Dev., 17, 1765–1787, https://doi.org/10.5194/gmd-17-1765-2024, https://doi.org/10.5194/gmd-17-1765-2024, 2024
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Reconstructions of climate variability before the observational period rely on climate proxies and sophisticated statistical models to link the proxy information and climate variability. Existing models tend to underestimate the true magnitude of variability, especially if the proxies contain non-climatic noise. We present and test a promising new framework for climate-index reconstructions, based on Gaussian processes, which reconstructs robust variability estimates from noisy and sparse data.
Aaron A. Naidoo-Bagwell, Fanny M. Monteiro, Katharine R. Hendry, Scott Burgan, Jamie D. Wilson, Ben A. Ward, Andy Ridgwell, and Daniel J. Conley
Geosci. Model Dev., 17, 1729–1748, https://doi.org/10.5194/gmd-17-1729-2024, https://doi.org/10.5194/gmd-17-1729-2024, 2024
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As an extension to the EcoGEnIE 1.0 Earth system model that features a diverse plankton community, EcoGEnIE 1.1 includes siliceous plankton diatoms and also considers their impact on biogeochemical cycles. With updates to existing nutrient cycles and the introduction of the silicon cycle, we see improved model performance relative to observational data. Through a more functionally diverse plankton community, the new model enables more comprehensive future study of ocean ecology.
Martin Butzin, Ying Ye, Christoph Völker, Özgür Gürses, Judith Hauck, and Peter Köhler
Geosci. Model Dev., 17, 1709–1727, https://doi.org/10.5194/gmd-17-1709-2024, https://doi.org/10.5194/gmd-17-1709-2024, 2024
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In this paper we describe the implementation of the carbon isotopes 13C and 14C into the marine biogeochemistry model FESOM2.1-REcoM3 and present results of long-term test simulations. Our model results are largely consistent with marine carbon isotope reconstructions for the pre-anthropogenic period, but also exhibit some discrepancies.
Sven Karsten, Hagen Radtke, Matthias Gröger, Ha T. M. Ho-Hagemann, Hossein Mashayekh, Thomas Neumann, and H. E. Markus Meier
Geosci. Model Dev., 17, 1689–1708, https://doi.org/10.5194/gmd-17-1689-2024, https://doi.org/10.5194/gmd-17-1689-2024, 2024
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This paper describes the development of a regional Earth System Model for the Baltic Sea region. In contrast to conventional coupling approaches, the presented model includes a flux calculator operating on a common exchange grid. This approach automatically ensures a locally consistent treatment of fluxes and simplifies the exchange of model components. The presented model can be used for various scientific questions, such as studies of natural variability and ocean–atmosphere interactions.
Cited articles
Adler, P. B., HilleRisLambers, J., Kyriakidis, P. C., Guan, Q., and Levine,
J. M.: Climate variability has a stabilizing effect on the coexistence of
prairie grasses, P. Natl. Acad. Sci. USA, 103, 12793–12798,
https://doi.org/10.1073/pnas.0600599103, 2006.
Adler, P. B., Fajardo, A., Kleinhesselink, A. R., and Kraft, N. J. B.:
Trait-based tests of coexistence mechanisms, Ecol. Lett., 16, 1294–1306,
https://doi.org/10.1111/ele.12157, 2013.
Angert, A. L., Huxman, T. E., Chesson, P., and Venable, D. L.: Functional
tradeoffs determine species coexistence via the storage effect, P.
Natl. Acad. Sci. USA, 106, 11641–11645,
https://doi.org/10.1073/pnas.0904512106, 2009.
Antoniadis, A., Lambert-Lacroix, S., and Poggi, J.-M.: Random forests for
global sensitivity analysis: A selective review, Reliab. Eng. Syst. Safe., 206,
107312, https://doi.org/10.1016/j.ress.2020.107312, 2020.
Bauman, D., Fortunel, C., Delhaye, G., Malhi, Y., Cernusak, L. A., Bentley,
L. P., Rifai, S. W., Aguirre-Gutiérrez, J., Menor, I. O., Phillips, O.
L., McNellis, B. E., Bradford, M., Laurance, S. G. W., Hutchinson, M. F.,
Dempsey, R., Santos-Andrade, P. E., Ninantay-Rivera, H. R., Paucar, J. R.
C., and McMahon, S. M.: Tropical tree mortality has increased with rising
atmospheric water stress, Nature, 608, 1–6,
https://doi.org/10.1038/s41586-022-04737-7, 2022.
Ben-Hur, E., Fragman-Sapir, O., Hadas, R., Singer, A., and Kadmon, R.:
Functional trade-offs increase species diversity in experimental plant
communities, Ecol. Lett., 15, 1276–1282,
https://doi.org/10.1111/j.1461-0248.2012.01850.x, 2012.
Berzaghi, F., Wright, I. J., Kramer, K., Oddou-Muratorio, S., Bohn, F. J.,
Reyer, C. P. O., Sabaté, S., Sanders, T. G. M., and Hartig, F.: Towards
a New Generation of Trait-Flexible Vegetation Models, Trends Ecol. Evol., 35,
191–205, https://doi.org/10.1016/j.tree.2019.11.006, 2019.
Bloomfield, K. J., Cernusak, L. A., Eamus, D., Ellsworth, D. S., Prentice,
I. C., Wright, I. J., Boer, M. M., Bradford, M. G., Cale, P., Cleverly, J.,
Egerton, J. J. G., Evans, B. J., Hayes, L. S., Hutchinson, M. F., Liddell,
M. J., Macfarlane, C., Meyer, W. S., Prober, S. M., Togashi, H. F., Wardlaw,
T., Zhu, L., and Atkin, O. K.: A continental-scale assessment of variability
in leaf traits: Within species, across sites and between seasons, Funct.
Ecol., 32, 1492–1506, https://doi.org/10.1111/1365-2435.13097, 2018.
Bonan, G. B.: Forests and Climate Change: Forcings, Feedbacks, and the
Climate Benefits of Forests, Science, 320, 1444–1449,
https://doi.org/10.1126/science.1155121, 2008.
Breiman, L.: Random Forests, Mach. Learn., 45, 5–32,
https://doi.org/10.1023/a:1010933404324, 2001.
Brister, E., Newhouse, A. E., and Texas, C. E. P.: The University of
North: Not the Same Old Chestnut: Rewilding Forests with Biotechnology,
Environ. Ethics, 42, 149–167,
https://doi.org/10.5840/enviroethics2020111614, 2020.
Buotte, P. C., Koven, C. D., Xu, C., Shuman, J. K., Goulden, M. L., Levis, S., Katz, J., Ding, J., Ma, W., Robbins, Z., and Kueppers, L. M.: Capturing functional strategies and compositional dynamics in vegetation demographic models, Biogeosciences, 18, 4473–4490, https://doi.org/10.5194/bg-18-4473-2021, 2021.
Cadotte, M. W. and Tucker, C. M.: Should Environmental Filtering be
Abandoned?, Trends Ecol. Evol., 32, 429–437,
https://doi.org/10.1016/j.tree.2017.03.004, 2017.
Cao, M. and Woodward, F. I.: Dynamic responses of terrestrial ecosystem
carbon cycling to global climate change, Nature, 393, 249–252,
https://doi.org/10.1038/30460, 1998.
Chen, T. and Guestrin, C.: XGBoost: A Scalable Tree Boosting System, Proc.
22nd Acm. Sigkdd. Int. Conf. Knowl. Discov. Data Min., 785–794,
https://doi.org/10.1145/2939672.2939785, 2016.
Cheng, Y., Leung, L. R., Huang, M., Koven, C., Detto, M., Knox, R., Bisht,
G., Bretfeld, M., and Fisher, R. A.: Modeling the joint effects of
vegetation characteristics and soil properties on ecosystem dynamics in a
Panama tropical forest, J. Adv. Model Earth. Sy., 14, e2021MS002603,
https://doi.org/10.1029/2021ms002603, 2021.
Chitra-Tarak, R., Xu, C., Aguilar, S., Anderson-Teixeira, K. J., Chambers,
J., Detto, M., Faybishenko, B., Fisher, R. A., Knox, R. G., Koven, C. D.,
Kueppers, L. M., Kunert, N., Kupers, S. J., McDowell, N. G., Newman, B. D.,
Paton, S. R., Pérez, R., Ruiz, L., Sack, L., Warren, J. M., Wolfe, B.
T., Wright, C., Wright, S. J., Zailaa, J., and McMahon, S. M.:
Hydraulically-vulnerable trees survive on deep-water access during droughts
in a tropical forest, New Phytol., 231, 1798–1813,
https://doi.org/10.1111/nph.17464, 2021.
Christoffersen, B. O., Gloor, M., Fauset, S., Fyllas, N. M., Galbraith, D. R., Baker, T. R., Kruijt, B., Rowland, L., Fisher, R. A., Binks, O. J., Sevanto, S., Xu, C., Jansen, S., Choat, B., Mencuccini, M., McDowell, N. G., and Meir, P.: Linking hydraulic traits to tropical forest function in a size-structured and trait-driven model (TFS v.1-Hydro), Geosci. Model Dev., 9, 4227–4255, https://doi.org/10.5194/gmd-9-4227-2016, 2016.
Costa, F. R. C., Schietti, J., Stark, S. C., and Smith, M. N.: The other
side of tropical forest drought: do shallow water table regions of Amazonia
act as large-scale hydrological refugia from drought?, New Phytol., 237, 714–733,
https://doi.org/10.1111/nph.17914, 2022.
da Bispo, P. C., Rodríguez-Veiga, P., Zimbres, B., Miranda, S. do C.
de, Cezare, C. H. G., Fleming, S., Baldacchino, F., Louis, V., Rains, D.,
Garcia, M., Espírito-Santo, F. D. B., Roitman, I., Pacheco-Pascagaza,
A. M., Gou, Y., Roberts, J., Barrett, K., Ferreira, L. G., Shimbo, J. Z.,
Alencar, A., Bustamante, M., Woodhouse, I. H., Sano, E. E., Ometto, J. P.,
Tansey, K., and Balzter, H.: Woody Aboveground Biomass Mapping of the
Brazilian Savanna with a Multi-Sensor and Machine Learning Approach, Remote Sens.-Basel, 12, 2685, https://doi.org/10.3390/rs12172685, 2020.
Dagon, K., Sanderson, B. M., Fisher, R. A., and Lawrence, D. M.: A machine learning approach to emulation and biophysical parameter estimation with the Community Land Model, version 5, Adv. Stat. Clim. Meteorol. Oceanogr., 6, 223–244, https://doi.org/10.5194/ascmo-6-223-2020, 2020.
Da Rocha, H. R., Manzi, A. O., Cabral, O. M., Miller, S. D., Goulden, M. L., Saleska, S. R., et al.: Patterns of water and heat flux across a biome gradient from tropical forest to savanna in Brazil, J. Geophys. Res.-Biogeo., 114, G00B12, https://doi.org/10.1029/2007JG000640, 2009.
Díaz, S., Kattge, J., Cornelissen, J. H. C., Wright, I. J., Lavorel,
S., Dray, S., Reu, B., Kleyer, M., Wirth, C., Prentice, I. C., Garnier, E.,
Bönisch, G., Westoby, M., Poorter, H., Reich, P. B., Moles, A. T.,
Dickie, J., Gillison, A. N., Zanne, A. E., Chave, J., Wright, S. J.,
Sheremet'ev, S. N., Jactel, H., Baraloto, C., Cerabolini, B., Pierce, S.,
Shipley, B., Kirkup, D., Casanoves, F., Joswig, J. S., Günther, A.,
Falczuk, V., Rüger, N., Mahecha, M. D., and Gorné, L. D.: The global
spectrum of plant form and function, Nature, 529, 167–171,
https://doi.org/10.1038/nature16489, 2016.
Domingues, T. F., Berry, J. A., Martinelli, L. A., Ometto, J. P. H. B., and
Ehleringer, J. R.: Parameterization of Canopy Structure and Leaf-Level Gas
Exchange for an Eastern Amazonian Tropical Rain Forest (Tapajós National
Forest, Pará, Brazil), Earth Interact., 9, 1–23,
https://doi.org/10.1175/ei149.1, 2005.
Dong, N., Prentice, I. C., Wright, I. J., Evans, B. J., Togashi, H. F.,
Caddy-Retalic, S., McInerney, F. A., Sparrow, B., Leitch, E., and Lowe, A.
J.: Components of leaf-trait variation along environmental gradients, New Phytol., 228, 82–94, https://doi.org/10.1111/nph.16558, 2020.
Duan, Q., Sorooshian, S., and Gupta, V.: Effective and efficient global
optimization for conceptual rainfall-runoff models, Water Resour. Res., 28,
1015–1031, https://doi.org/10.1029/91wr02985, 1992.
Engemann, K., Sandel, B., Boyle, B., Enquist, B. J., Jørgensen, P. M.,
Kattge, J., McGill, B. J., Morueta-Holme, N., Peet, R. K., Spencer, N. J.,
Violle, C., Wiser, S. K., and Svenning, J.-C.: A plant growth form dataset
for the New World, Ecology, 97, 3243–3243,
https://doi.org/10.1002/ecy.1569, 2016.
Fang, Y., Leung, L. R., Duan, Z., Wigmosta, M. S., Maxwell, R. M., Chambers,
J. Q., and Tomasella, J.: Influence of landscape heterogeneity on water
available to tropical forests in an Amazonian catchment and implications for
modeling drought response, J. Geophys. Res.-Atmos.,
122, 8410–8426, https://doi.org/10.1002/2017jd027066, 2017.
Fang, Y., Leung, L. R., Koven, C. D., Bisht, G., Detto, M., Cheng, Y., McDowell, N., Muller-Landau, H., Wright, S. J., and Chambers, J. Q.: Modeling the topographic influence on aboveground biomass using a coupled model of hillslope hydrology and ecosystem dynamics, Geosci. Model Dev., 15, 7879–7901, https://doi.org/10.5194/gmd-15-7879-2022, 2022.
Farrior, C. E., Bohlman, S. A., Hubbell, S., and Pacala, S. W.: Dominance of
the suppressed: Power-law size structure in tropical forests, Science, 351,
155–157, https://doi.org/10.1126/science.aad0592, 2016.
FATES Development Team: Technical Note for the Functionally Assembled Terrestrial Ecosystem Simulator (FATES) (v0.0.0), Zenodo [data set], https://doi.org/10.5281/zenodo.3517272, 2019.
Feeley, K. J., Davies, S. J., Ashton, P. S., Bunyavejchewin, S., Supardi, M.
N. N., Kassim, A. R., Tan, S., and Chave, J.: The role of gap phase
processes in the biomass dynamics of tropical forests, P. Roy. Soc. B, 274, 2857–2864, https://doi.org/10.1098/rspb.2007.0954,
2007.
Feigl, M., Lebiedzinski, K., Herrnegger, M., and Schulz, K.: Machine-learning methods for stream water temperature prediction, Hydrol. Earth Syst. Sci., 25, 2951–2977, https://doi.org/10.5194/hess-25-2951-2021, 2021.
Fer, I., Kelly, R., Moorcroft, P. R., Richardson, A. D., Cowdery, E. M., and Dietze, M. C.: Linking big models to big data: efficient ecosystem model calibration through Bayesian model emulation, Biogeosciences, 15, 5801–5830, https://doi.org/10.5194/bg-15-5801-2018, 2018.
Fisher, R., McDowell, N., Purves, D., Moorcroft, P., Sitch, S., Cox, P.,
Huntingford, C., Meir, P., and Woodward, F. I.: Assessing uncertainties in a
second-generation dynamic vegetation model caused by ecological scale
limitations, New Phytol., 187, 666–681,
https://doi.org/10.1111/j.1469-8137.2010.03340.x, 2010.
Fisher, R. A., Muszala, S., Verteinstein, M., Lawrence, P., Xu, C., McDowell, N. G., Knox, R. G., Koven, C., Holm, J., Rogers, B. M., Spessa, A., Lawrence, D., and Bonan, G.: Taking off the training wheels: the properties of a dynamic vegetation model without climate envelopes, CLM4.5(ED), Geosci. Model Dev., 8, 3593–3619, https://doi.org/10.5194/gmd-8-3593-2015, 2015.
Fisher, R. A., Koven, C. D., Anderegg, W. R. L., Christoffersen, B. O.,
Dietze, M. C., Farrior, C. E., Holm, J. A., Hurtt, G. C., Knox, R. G.,
Lawrence, P. J., Lichstein, J. W., Longo, M., Matheny, A. M., Medvigy, D.,
Muller-Landau, H. C., Powell, T. L., Serbin, S. P., Sato, H., Shuman, J. K.,
Smith, B., Trugman, A. T., Viskari, T., Verbeeck, H., Weng, E., Xu, C., Xu,
X., Zhang, T., and Moorcroft, P. R.: Vegetation demographics in Earth System
Models: A review of progress and priorities, Global Change Biol., 24, 35–54,
https://doi.org/10.1111/gcb.13910, 2018.
Foken, T.: The energy balance closure problem: An overview, Ecol. Appl., 18, 1351–1367, https://doi.org/10.1890/06-0922.1, 2008.
Foley, J. A., Prentice, I. C., Ramankutty, N., Levis, S., Pollard, D.,
Sitch, S., and Haxeltine, A.: An integrated biosphere model of land surface
processes, terrestrial carbon balance, and vegetation dynamics, Global
Biogeochem. Cy., 10, 603–628, https://doi.org/10.1029/96gb02692, 1996.
Fowler, D., Lessard, J.-P., and Sanders, N. J.: Niche filtering rather than
partitioning shapes the structure of temperate forest ant communities, J.
Animal Ecol., 83, 943–952, https://doi.org/10.1111/1365-2656.12188, 2013.
Friedman, J. H.: Greedy function approximation: A gradient boosting
machine, Ann. Stat., 29, 1189–1232, https://doi.org/10.1214/aos/1013203451, 2001.
Fyllas, N. M., Gloor, E., Mercado, L. M., Sitch, S., Quesada, C. A., Domingues, T. F., Galbraith, D. R., Torre-Lezama, A., Vilanova, E., Ramírez-Angulo, H., Higuchi, N., Neill, D. A., Silveira, M., Ferreira, L., Aymard C., G. A., Malhi, Y., Phillips, O. L., and Lloyd, J.: Analysing Amazonian forest productivity using a new individual and trait-based model (TFS v.1), Geosci. Model Dev., 7, 1251–1269, https://doi.org/10.5194/gmd-7-1251-2014, 2014.
Gatti, L. V., Basso, L. S., Miller, J. B., Gloor, M., Domingues, L. G.,
Cassol, H. L. G., Tejada, G., Aragão, L. E. O. C., Nobre, C., Peters,
W., Marani, L., Arai, E., Sanches, A. H., Corrêa, S. M., Anderson, L.,
Randow, C. V., Correia, C. S. C., Crispim, S. P., and Neves, R. A. L.:
Amazonia as a carbon source linked to deforestation and climate change,
Nature, 595, 388–393, https://doi.org/10.1038/s41586-021-03629-6, 2021.
Golaz, J., Caldwell, P. M., Roekel, L. P. V., Petersen, M. R., Tang, Q.,
Wolfe, J. D., Abeshu, G., Anantharaj, V., Asay-Davis, X. S., Bader, D. C.,
Baldwin, S. A., Bisht, G., Bogenschutz, P. A., Branstetter, M., Brunke, M.
A., Brus, S. R., Burrows, S. M., Cameron-Smith, P. J., Donahue, A. S.,
Deakin, M., Easter, R. C., Evans, K. J., Feng, Y., Flanner, M., Foucar, J.
G., Fyke, J. G., Griffin, B. M., Hannay, C., Harrop, B. E., Hoffman, M. J.,
Hunke, E. C., Jacob, R. L., Jacobsen, D. W., Jeffery, N., Jones, P. W.,
Keen, N. D., Klein, S. A., Larson, V. E., Leung, L. R., Li, H., Lin, W.,
Lipscomb, W. H., Ma, P., Mahajan, S., Maltrud, M. E., Mametjanov, A.,
McClean, J. L., McCoy, R. B., Neale, R. B., Price, S. F., Qian, Y., Rasch,
P. J., Eyre, J. E. J. R., Riley, W. J., Ringler, T. D., Roberts, A. F.,
Roesler, E. L., Salinger, A. G., Shaheen, Z., Shi, X., Singh, B., Tang, J.,
Taylor, M. A., Thornton, P. E., Turner, A. K., Veneziani, M., Wan, H., Wang,
H., Wang, S., Williams, D. N., Wolfram, P. J., Worley, P. H., Xie, S., Yang,
Y., Yoon, J., Zelinka, M. D., Zender, C. S., Zeng, X., Zhang, C., Zhang, K.,
Zhang, Y., Zheng, X., Zhou, T., and Zhu, Q.: The DOE E3SM Coupled Model
Version 1: Overview and Evaluation at Standard Resolution, J. Adv. Model Earth
Sy., 11, 2089–2129, https://doi.org/10.1029/2018ms001603, 2019.
Hanbury-Brown, A. R., Ward, R. E., and Kueppers, L. M.: Forest regeneration
within Earth system models: current process representations and ways
forward, New Phytol., 235, 20–40, https://doi.org/10.1111/nph.18131, 2022.
Haverd, V., Smith, B., Cook, G. D., Briggs, P. R., Nieradzik, L., Roxburgh,
S. H., Liedloff, A., Meyer, C. P., and Canadell, J. G.: A stand-alone tree
demography and landscape structure module for Earth system models, Geophys.
Res. Lett., 40, 5234–5239, https://doi.org/10.1002/grl.50972, 2013.
He, X., Liu, S., Xu, T., Yu, K., Gentine, P., Zhang, Z., Xu, Z., Jiao, D.,
and Wu, D.: Improving predictions of evapotranspiration by integrating
multi-source observations and land surface model, Agr. Water Manage., 272,
107827, https://doi.org/10.1016/j.agwat.2022.107827, 2022.
Holm, J. A., Knox, R. G., Zhu, Q., Fisher, R. A., Koven, C. D., Lima, A. J.
N., Riley, W. J., Longo, M., Negrón-Juárez, R. I., Araujo, A. C.,
Kueppers, L. M., Moorcroft, P. R., Higuchi, N., and Chambers, J. Q.: The
Central Amazon Biomass Sink Under Current and Future Atmospheric CO2:
Predictions From Big-Leaf and Demographic Vegetation Models, J. Geophys. Res.-Biogeo., 125, e2019JG005500, https://doi.org/10.1029/2019jg005500, 2020.
Huang, M., Xu, Y., Longo, M., Keller, M., Knox, R. G., Koven, C. D., and Fisher, R. A.: Assessing impacts of selective logging on water, energy, and carbon budgets and ecosystem dynamics in Amazon forests using the Functionally Assembled Terrestrial Ecosystem Simulator, Biogeosciences, 17, 4999–5023, https://doi.org/10.5194/bg-17-4999-2020, 2020.
Hurtt, G. C., Moorcroft, PauL. R., And, S. W. P., and Levin, S. A.:
Terrestrial models and global change: challenges for the future, Global
Change Biol., 4, 581–590,
https://doi.org/10.1046/j.1365-2486.1998.t01-1-00203.x, 1998.
Jain, P., Coogan, S. C. P., Subramanian, S. G., Crowley, M., Taylor, S., and
Flannigan, M. D.: A review of machine learning applications in wildfire
science and management, Arxiv, https://doi.org/10.48550/arxiv.2003.00646,
2020.
Jonard, M., André, F., de Coligny, F., de Wergifosse, L., Beudez, N., Davi, H., Ligot, G., Ponette, Q., and Vincke, C.: HETEROFOR 1.0: a spatially explicit model for exploring the response of structurally complex forests to uncertain future conditions – Part 1: Carbon fluxes and tree dimensional growth, Geosci. Model Dev., 13, 905–935, https://doi.org/10.5194/gmd-13-905-2020, 2020.
Jung, M., Koirala, S., Weber, U., Ichii, K., Gans, F., Camps-Valls, G.,
Papale, D., Schwalm, C., Tramontana, G., and Reichstein, M.: The FLUXCOM
ensemble of global land-atmosphere energy fluxes., Sci. Data, 6, 74,
https://doi.org/10.1038/s41597-019-0076-8, 2019.
Kattge, J., Bönisch, G., Díaz, S., et al.: TRY plant trait database – enhanced coverage and
open access, Global Change Biol., 26, 119–188,
https://doi.org/10.1111/gcb.14904, 2020.
Koven, C. D., Knox, R. G., Fisher, R. A., Chambers, J. Q., Christoffersen, B. O., Davies, S. J., Detto, M., Dietze, M. C., Faybishenko, B., Holm, J., Huang, M., Kovenock, M., Kueppers, L. M., Lemieux, G., Massoud, E., McDowell, N. G., Muller-Landau, H. C., Needham, J. F., Norby, R. J., Powell, T., Rogers, A., Serbin, S. P., Shuman, J. K., Swann, A. L. S., Varadharajan, C., Walker, A. P., Wright, S. J., and Xu, C.: Benchmarking and parameter sensitivity of physiological and vegetation dynamics using the Functionally Assembled Terrestrial Ecosystem Simulator (FATES) at Barro Colorado Island, Panama, Biogeosciences, 17, 3017–3044, https://doi.org/10.5194/bg-17-3017-2020, 2020.
Kraft, N. J. B., Valencia, R., and Ackerly, D. D.: Functional Traits and
Niche-Based Tree Community Assembly in an Amazonian Forest, Science, 322,
580–582, https://doi.org/10.1126/science.1160662, 2008.
Kraft, N. J. B., Adler, P. B., Godoy, O., James, E. C., Fuller, S., and
Levine, J. M.: Community assembly, coexistence and the environmental
filtering metaphor, Funct. Ecol., 29, 592–599,
https://doi.org/10.1111/1365-2435.12345, 2015.
Lambert, M. S. A., Tang, H., Aas, K. S., Stordal, F., Fisher, R. A., Fang, Y., Ding, J., and Parmentier, F.-J. W.: Inclusion of a cold hardening scheme to represent frost tolerance is essential to model realistic plant hydraulics in the Arctic–boreal zone in CLM5.0-FATES-Hydro, Geosci. Model Dev., 15, 8809–8829, https://doi.org/10.5194/gmd-15-8809-2022, 2022.
Lawrence, D. M., Fisher, R. A., Koven, C. D., Oleson, K. W., Swenson, S. C.,
Bonan, G., Collier, N., Ghimire, B., Kampenhout, L., Kennedy, D., Kluzek,
E., Lawrence, P. J., Li, F., Li, H., Lombardozzi, D., Riley, W. J., Sacks,
W. J., Shi, M., Vertenstein, M., Wieder, W. R., Xu, C., Ali, A. A., Badger,
A. M., Bisht, G., Broeke, M., Brunke, M. A., Burns, S. P., Buzan, J., Clark,
M., Craig, A., Dahlin, K., Drewniak, B., Fisher, J. B., Flanner, M., Fox, A.
M., Gentine, P., Hoffman, F., Keppel-Aleks, G., Knox, R., Kumar, S.,
Lenaerts, J., Leung, L. R., Lipscomb, W. H., Lu, Y., Pandey, A., Pelletier,
J. D., Perket, J., Randerson, J. T., Ricciuto, D. M., Sanderson, B. M.,
Slater, A., Subin, Z. M., Tang, J., Thomas, R. Q., Martin, M. V., and Zeng,
X.: The Community Land Model Version 5: Description of New Features,
Benchmarking, and Impact of Forcing Uncertainty, J. Adv. Model Earth Sy., 11,
4245–4287, https://doi.org/10.1029/2018ms001583, 2019.
Leung, L. R., Bader, D. C., Taylor, M. A., and McCoy, R. B.: An Introduction
to the E3SM Special Collection: Goals, Science Drivers, Development, and
Analysis, J. Adv. Model Earth Sy., 12, e2019MS001821, https://doi.org/10.1029/2019ms001821,
2020.
Li, L.: A machine learning approach targeting parameter estimation for plant functional type coexistence modeling using ELM-FATES, Zenodo [code], https://doi.org/10.5281/zenodo.7730685, 2022.
Li, L., Yang, Z., Matheny, A. M., Zheng, H., Swenson, S. C., Lawrence, D.
M., Barlage, M., Yan, B., McDowell, N. G., and Leung, L. R.: Representation
of Plant Hydraulics in the Noah-MP Land Surface Model: Model Development and
Multiscale Evaluation, J. Adv. Model Earth Sy., 13, e2020MS002214,
https://doi.org/10.1029/2020ms002214, 2021.
Li, Y., Li, M., Li, C., and Liu, Z.: Forest aboveground biomass estimation
using Landsat 8 and Sentinel-1A data with machine learning algorithms, Sci.
Rep.-UK, 10, 9952, https://doi.org/10.1038/s41598-020-67024-3, 2020.
Liu, S. and Ng, G.-H. C.: A data-conditioned stochastic parameterization of
temporal plant trait variability in an ecohydrological model and the
potential for plasticity, Agr. Forest Meteorol., 274, 184–194,
https://doi.org/10.1016/j.agrformet.2019.05.005, 2019.
Lloyd, J., Patiño, S., Paiva, R. Q., Nardoto, G. B., Quesada, C. A., Santos, A. J. B., Baker, T. R., Brand, W. A., Hilke, I., Gielmann, H., Raessler, M., Luizão, F. J., Martinelli, L. A., and Mercado, L. M.: Optimisation of photosynthetic carbon gain and within-canopy gradients of associated foliar traits for Amazon forest trees, Biogeosciences, 7, 1833–1859, https://doi.org/10.5194/bg-7-1833-2010, 2010.
Longo, M., Knox, R. G., Medvigy, D. M., Levine, N. M., Dietze, M. C., Kim, Y., Swann, A. L. S., Zhang, K., Rollinson, C. R., Bras, R. L., Wofsy, S. C., and Moorcroft, P. R.: The biophysics, ecology, and biogeochemistry of functionally diverse, vertically and horizontally heterogeneous ecosystems: the Ecosystem Demography model, version 2.2 – Part 1: Model description, Geosci. Model Dev., 12, 4309–4346, https://doi.org/10.5194/gmd-12-4309-2019, 2019.
Longo, M., Saatchi, S., Keller, M., Bowman, K., Ferraz, A., Moorcroft, P.
R., Morton, D. C., Bonal, D., Brando, P., Burban, B., Derroire, G.,
dos-Santos, M. N., Meyer, V., Saleska, S., Trumbore, S., and Vincent, G.:
Impacts of Degradation on Water, Energy, and Carbon Cycling of the Amazon
Tropical Forests, J. Geophys. Res.-Biogeo., 125, e2020JG005677,
https://doi.org/10.1029/2020jg005677, 2020.
Lu, X., Wang, Y., Wright, I. J., Reich, P. B., Shi, Z., and Dai, Y.:
Incorporation of plant traits in a land surface model helps explain the
global biogeographical distribution of major forest functional types, Global
Ecol. Biogeogr., 26, 304–317, https://doi.org/10.1111/geb.12535, 2017.
Lundberg, S. and Lee, S.-I.: A Unified Approach to Interpreting Model
Predictions, Arxiv, https://doi.org/10.48550/arXiv.1705.07874, 2017.
Lundberg, S. M., Nair, B., Vavilala, M. S., Horibe, M., Eisses, M. J.,
Adams, T., Liston, D. E., Low, D. K.-W., Newman, S.-F., Kim, J., and Lee,
S.-I.: Explainable machine-learning predictions for the prevention of
hypoxaemia during surgery, Nat. Biomed. Eng., 2, 749–760,
https://doi.org/10.1038/s41551-018-0304-0, 2018.
Lundberg, S. M., Erion, G., Chen, H., DeGrave, A., Prutkin, J. M., Nair, B.,
Katz, R., Himmelfarb, J., Bansal, N., and Lee, S.-I.: From local
explanations to global understanding with explainable AI for trees, Nat. Mach.
Intell., 2, 56–67, https://doi.org/10.1038/s42256-019-0138-9, 2020.
Ma, L., Hurtt, G., Ott, L., Sahajpal, R., Fisk, J., Lamb, R., Tang, H., Flanagan, S., Chini, L., Chatterjee, A., and Sullivan, J.: Global evaluation of the Ecosystem Demography model (ED v3.0), Geosci. Model Dev., 15, 1971–1994, https://doi.org/10.5194/gmd-15-1971-2022, 2022.
Maréchaux, I. and Chave, J.: An individual-based forest model to jointly
simulate carbon and tree diversity in Amazonia: description and
applications, Ecol. Monogr., 87, 632–664, https://doi.org/10.1002/ecm.1271,
2017.
Martín Belda, D., Anthoni, P., Wårlind, D., Olin, S., Schurgers, G., Tang, J., Smith, B., and Arneth, A.: LPJ-GUESS/LSMv1.0: a next-generation land surface model with high ecological realism, Geosci. Model Dev., 15, 6709–6745, https://doi.org/10.5194/gmd-15-6709-2022, 2022.
Mason, N. W. H., Richardson, S. J., Peltzer, D. A., Bello, F. de, Wardle, D.
A., and Allen, R. B.: Changes in coexistence mechanisms along a long-term
soil chronosequence revealed by functional trait diversity: Functional
diversity along ecological gradients, J. Ecol., 100, 678–689,
https://doi.org/10.1111/j.1365-2745.2012.01965.x, 2012.
McDowell, N. G., Allen, C. D., Anderson-Teixeira, K., Aukema, B. H.,
Bond-Lamberty, B., Chini, L., Clark, J. S., Dietze, M., Grossiord, C.,
Hanbury-Brown, A., Hurtt, G. C., Jackson, R. B., Johnson, D. J., Kueppers,
L., Lichstein, J. W., Ogle, K., Poulter, B., Pugh, T. A. M., Seidl, R.,
Turner, M. G., Uriarte, M., Walker, A. P., and Xu, C.: Pervasive shifts in
forest dynamics in a changing world, Science, 368, eaaz9463,
https://doi.org/10.1126/science.aaz9463, 2020.
McDowell, N. G., Sapes, G., Pivovaroff, A., Adams, H. D., Allen, C. D.,
Anderegg, W. R. L., Arend, M., Breshears, D. D., Brodribb, T., Choat, B.,
Cochard, H., Cáceres, M. D., Kauwe, M. G. D., Grossiord, C., Hammond, W.
M., Hartmann, H., Hoch, G., Kahmen, A., Klein, T., Mackay, D. S., Mantova,
M., Martínez-Vilalta, J., Medlyn, B. E., Mencuccini, M., Nardini, A.,
Oliveira, R. S., Sala, A., Tissue, D. T., Torres-Ruiz, J. M., Trowbridge, A.
M., Trugman, A. T., Wiley, E., and Xu, C.: Mechanisms of woody-plant
mortality under rising drought, CO2 and vapour pressure deficit, Nat. Rev.
Earth Environ., 3, 294–308, https://doi.org/10.1038/s43017-022-00272-1,
2022.
Mckay, M. D., Beckman, R. J., and Conover, W. J.: A Comparison of Three
Methods for Selecting Values of Input Variables in the Analysis of Output
From a Computer Code, Technometrics, 42, 55–61,
https://doi.org/10.1080/00401706.2000.10485979, 2000.
McMahon, S. M., Harrison, S. P., Armbruster, W. S., Bartlein, P. J., Beale,
C. M., Edwards, M. E., Kattge, J., Midgley, G., Morin, X., and Prentice, I.
C.: Improving assessment and modelling of climate change impacts on global
terrestrial biodiversity, Trends Ecol. Evol., 26, 249–259,
https://doi.org/10.1016/j.tree.2011.02.012, 2011.
Medvigy, D., Wofsy, S. C., Munger, J. W., Hollinger, D. Y., and Moorcroft,
P. R.: Mechanistic scaling of ecosystem function and dynamics in space and
time: Ecosystem Demography model version 2, J. Geophys. Res.-Biogeo.,
114, G01002, https://doi.org/10.1029/2008jg000812, 2009.
Meng, T.-T., Wang, H., Harrison, S. P., Prentice, I. C., Ni, J., and Wang, G.: Responses of leaf traits to climatic gradients: adaptive variation versus compositional shifts, Biogeosciences, 12, 5339–5352, https://doi.org/10.5194/bg-12-5339-2015, 2015.
Michalko, R. and Pekár, S.: Niche partitioning and niche filtering
jointly mediate the coexistence of three closely related spider species
(Araneae, Philodromidae), Ecol. Entomol., 40, 22–33,
https://doi.org/10.1111/een.12149, 2015.
Mitchard, E. T. A.: The tropical forest carbon cycle and climate change,
Nature, 559, 527–534, https://doi.org/10.1038/s41586-018-0300-2, 2018.
Moorcroft, P. R.: Recent advances in ecosystem-atmosphere interactions: an
ecological perspective, P. Roy. Soc. Lond. B, 270,
1215–1227, https://doi.org/10.1098/rspb.2002.2251, 2003.
Moorcroft, P. R., Hurtt, G. C., and Pacala, S. W.: A Method for Scaling
Vegetation Dynamics: The Ecosystem Demography Model (ED), Ecol. Monogr., 71,
557, https://doi.org/10.2307/3100036, 2001.
Mora, C., Tittensor, D. P., Adl, S., Simpson, A. G. B., and Worm, B.: How
Many Species Are There on Earth and in the Ocean?, Plos Biol., 9, e1001127,
https://doi.org/10.1371/journal.pbio.1001127, 2011.
Morais, T. G., Teixeira, R. F. M., Figueiredo, M., and Domingos, T.: The use
of machine learning methods to estimate aboveground biomass of grasslands: A
review, Ecol. Indic., 130, 108081,
https://doi.org/10.1016/j.ecolind.2021.108081, 2021.
Nearing, G. S., Kratzert, F., Sampson, A. K., Pelissier, C. S., Klotz, D.,
Frame, J. M., Prieto, C., and Gupta, H. V.: What Role Does Hydrological
Science Play in the Age of Machine Learning?, Water Resour. Res., 57, e2020WR028091,
https://doi.org/10.1029/2020wr028091, 2021.
Nicotra, A. B., Atkin, O. K., Bonser, S. P., Davidson, A. M., Finnegan, E.
J., Mathesius, U., Poot, P., Purugganan, M. D., Richards, C. L., Valladares,
F., and van Kleunen, M.: Plant phenotypic plasticity in a changing climate,
Trends Plant Sci., 15, 684–692,
https://doi.org/10.1016/j.tplants.2010.09.008, 2010.
Oliveira, R. S., Eller, C. B., Barros, F. de V., Hirota, M., Brum, M., and
Bittencourt, P.: Linking plant hydraulics and the fast–slow continuum to
understand resilience to drought in tropical ecosystems, New Phytol., 230,
904–923, https://doi.org/10.1111/nph.17266, 2021.
Padarian, J., McBratney, A. B., and Minasny, B.: Game theory interpretation of digital soil mapping convolutional neural networks, SOIL, 6, 389–397, https://doi.org/10.5194/soil-6-389-2020, 2020.
Pal, A., Mahajan, S., and Norman, M. R.: Using Deep Neural Networks as
Cost-Effective Surrogate Models for Super-Parameterized E3SM Radiative
Transfer, Geophys. Res. Lett., 46, 6069–6079,
https://doi.org/10.1029/2018gl081646, 2019.
Peatier, S., Sanderson, B. M., Terray, L., and Roehrig, R.: Investigating
Parametric Dependence of Climate Feedbacks in the Atmospheric Component of
CNRM-CM6-1, Geophys. Res. Lett., 49, e2021GL095084, https://doi.org/10.1029/2021gl095084,
2022.
Pham, T. D., Yokoya, N., Xia, J., Ha, N. T., Le, N. N., Nguyen, T. T. T.,
Dao, T. H., Vu, T. T. P., Pham, T. D., and Takeuchi, W.: Comparison of
Machine Learning Methods for Estimating Mangrove Above-Ground Biomass Using
Multiple Source Remote Sensing Data in the Red River Delta Biosphere
Reserve, Vietnam, Remote Sens.-Basel, 12, 1334,
https://doi.org/10.3390/rs12081334, 2020.
Piao, S., Wang, X., Wang, K., Li, X., Bastos, A., Canadell, J. G., Ciais,
P., Friedlingstein, P., and Sitch, S.: Interannual variation of terrestrial
carbon cycle: Issues and perspectives, Global Change Biol., 26, 300–318,
https://doi.org/10.1111/gcb.14884, 2020.
Poorter, L., Bongers, F., Sterck, F. J., and Wöll, H.: Architecture of 53 rain forest tree species differing in adult stature and shade tolerance, 84, 602–608,
https://doi.org/10.1890/0012-9658(2003)084[0602:aorfts]2.0.co;2, 2003.
Purves, D. W., Lichstein, J. W., Strigul, N., and Pacala, S. W.: Predicting
and understanding forest dynamics using a simple tractable model, P.
Natl. Acad. Sci. USA, 105, 17018–17022,
https://doi.org/10.1073/pnas.0807754105, 2008.
Reich, P. B.: The world-wide “fast–slow” plant economics spectrum: a traits
manifesto, J. Ecol., 102, 275–301, https://doi.org/10.1111/1365-2745.12211,
2014.
Reichstein, M., Camps-Valls, G., Stevens, B., Jung, M., Denzler, J.,
Carvalhais, N., and Prabhat: Deep learning and process understanding for
data-driven Earth system science, Nature, 566, 195–204,
https://doi.org/10.1038/s41586-019-0912-1, 2019.
Restrepo-Coupe, N., da Rocha, H. R., Hutyra, L. R., de Araujo, A. C., Borma, L. S., Christoffersen, B., Cabral, O., de Camargo, P. B., Cardoso, F. L., Costa, A. C. L., Fitzjarrald, D. R. Goulden,, M. L., Kruijt, B., Maia, J. M. F., Malhi, Y. S., Manzi, A. O., Miller, S. D., Nobre, A. D., von Randow, C., Abreu Safaj, L. D., Sakai, R. K., Tota, J., Wofsy, S. C., Zanchi, F. B., and Saleska, S. R.: LBA-ECO CD-32 Flux Tower Network Data Compilation, Brazilian Amazon: 1999–2006, V2, ORNL DAAC, Oak Ridge, Tennessee, USA [data set], https://doi.org/10.3334/ORNLDAAC/1842, 2021.
Rodrigues, M. and de la Riva, J.: An insight into machine-learning
algorithms to model human-caused wildfire occurrence, Environ Modell Softw,
57, 192–201, https://doi.org/10.1016/j.envsoft.2014.03.003, 2014.
Rouholahnejad, E., Abbaspour, K. C., Vejdani, M., Srinivasan, R., Schulin,
R., and Lehmann, A.: A parallelization framework for calibration of
hydrological models, Environ. Modell. Softw., 31, 28–36,
https://doi.org/10.1016/j.envsoft.2011.12.001, 2012.
Rüger, N., Condit, R., Dent, D. H., DeWalt, S. J., Hubbell, S. P., Lichstein, J. W., Lopez, O. R., Wirth, C., and Farrior, C. E.: Demographic trade-offs predict tropical forest dynamics, Science, 368, 165–168, https://doi.org/10.1126/science.aaz4797, 2020.
Sakschewski, B., Bloh, W., Boit, A., Rammig, A., Kattge, J., Poorter, L.,
Peñuelas, J., and Thonicke, K.: Leaf and stem economics spectra drive
diversity of functional plant traits in a dynamic global vegetation model,
Global Change Biol., 21, 2711–2725, https://doi.org/10.1111/gcb.12870, 2015.
Sakschewski, B., Bloh, W. von, Boit, A., Poorter, L., Peña-Claros, M.,
Heinke, J., Joshi, J., and Thonicke, K.: Resilience of Amazon forests
emerges from plant trait diversity, Nat. Clim. Change, 6, 1032–1036,
https://doi.org/10.1038/nclimate3109, 2016.
Sato, H., Itoh, A., and Kohyama, T.: SEIB–DGVM: A new Dynamic Global
Vegetation Model using a spatially explicit individual-based approach, Ecol.
Model., 200, 279–307, https://doi.org/10.1016/j.ecolmodel.2006.09.006, 2007.
Sawada, Y.: Machine Learning Accelerates Parameter Optimization and
Uncertainty Assessment of a Land Surface Model, J. Geophys. Res.-Atmos.,
125, e2020JD032688, https://doi.org/10.1029/2020jd032688, 2020.
Sayad, Y. O., Mousannif, H., and Moatassime, H. A.: Predictive modeling of
wildfires: A new dataset and machine learning approach, Fire Safety J., 104,
130–146, https://doi.org/10.1016/j.firesaf.2019.01.006, 2019.
Scheiter, S., Langan, L., and Higgins, S. I.: Next‐generation dynamic global vegetation models: learning from community ecology, New Phytologist, 198, 957–969, https://doi.org/10.1111/nph.12210, 2013.
Shen, C.: A Transdisciplinary Review of Deep Learning Research and Its
Relevance for Water Resources Scientists, Water Resour. Res., 54, 8558–8593,
https://doi.org/10.1029/2018wr022643, 2018.
Siefert, A., Violle, C., Chalmandrier, L., Albert, C. H., Taudiere, A.,
Fajardo, A., Aarssen, L. W., Baraloto, C., Carlucci, M. B., Cianciaruso, M.
V., Dantas, V. L., Bello, F., Duarte, L. D. S., Fonseca, C. R., Freschet, G.
T., Gaucherand, S., Gross, N., Hikosaka, K., Jackson, B., Jung, V.,
Kamiyama, C., Katabuchi, M., Kembel, S. W., Kichenin, E., Kraft, N. J. B.,
Lagerström, A., Bagousse-Pinguet, Y. L., Li, Y., Mason, N., Messier, J.,
Nakashizuka, T., Overton, J. McC., Peltzer, D. A., Pérez-Ramos, I. M.,
Pillar, V. D., Prentice, H. C., Richardson, S., Sasaki, T., Schamp, B. S.,
Schöb, C., Shipley, B., Sundqvist, M., Sykes, M. T., Vandewalle, M., and
Wardle, D. A.: A global meta-analysis of the relative extent of
intraspecific trait variation in plant communities, Ecol. Lett., 18,
1406–1419, https://doi.org/10.1111/ele.12508, 2015.
Sit, M., Demiray, B. Z., Xiang, Z., Ewing, G. J., Sermet, Y., and Demir, I.:
A comprehensive review of deep learning applications in hydrology and water
resources, Water Sci. Technol., 82, 2635–2670,
https://doi.org/10.2166/wst.2020.369, 2020.
Sitch, S., Smith, B., Prentice, I. C., Arneth, A., Bondeau, A., Cramer, W.,
Kaplan, J. O., Levis, S., Lucht, W., Sykes, M. T., Thonicke, K., and
Venevsky, S.: Evaluation of ecosystem dynamics, plant geography and
terrestrial carbon cycling in the LPJ dynamic global vegetation model: LPJ
DYNAMIC GLOBAL VEGETATION MODEL, Global Change Biol., 9, 161–185,
https://doi.org/10.1046/j.1365-2486.2003.00569.x, 2003.
Snell, R. S., Huth, A., Nabel, J. E. M. S., Bocedi, G., Travis, J. M. J.,
Gravel, D., Bugmann, H., Gutiérrez, A. G., Hickler, T., Higgins, S. I.,
Reineking, B., Scherstjanoi, M., Zurbriggen, N., and Lischke, H.: Using
dynamic vegetation models to simulate plant range shifts, Ecography, 37,
1184–1197, https://doi.org/10.1111/ecog.00580, 2014.
Snoek, J., Larochelle, H., and Adams, R. P.: Practical Bayesian Optimization
of Machine Learning Algorithms, Arxiv, https://doi.org/10.48550/arXiv.1206.2944, 2012.
Stark, S. C., Leitold, V., Wu, J. L., Hunter, M. O., de Castilho, C. V.,
Costa, F. R. C., McMahon, S. M., Parker, G. G., Shimabukuro, M. T., Lefsky,
M. A., Keller, M., Alves, L. F., Schietti, J., Shimabukuro, Y. E.,
Brandão, D. O., Woodcock, T. K., Higuchi, N., de Camargo, P. B.,
de Oliveira, R. C., Saleska, S. R., and Chave, J.: Amazon forest carbon
dynamics predicted by profiles of canopy leaf area and light environment,
Ecol. Lett., 15, 1406–1414, https://doi.org/10.1111/j.1461-0248.2012.01864.x,
2012.
Strigul, N., Pristinski, D., Purves, D., Dushoff, J., and Pacala, S.:
Scaling from trees to forests: tractable macroscopic equations for forest dynamics, Ecol. Monogr., 78, 523–545, https://doi.org/10.1890/08-0082.1,
2008.
Swenson, N. G. and Enquist, B. J.: Opposing assembly mechanisms in a
Neotropical dry forest: implications for phylogenetic and functional
community ecology, Ecology, 90, 2161–2170,
https://doi.org/10.1890/08-1025.1, 2009.
Thakur, M. P. and Wright, A. J.: Environmental Filtering, Niche
Construction, and Trait Variability: The Missing Discussion, Trends Ecol.
Evol., 32, 884–886, https://doi.org/10.1016/j.tree.2017.09.014, 2017.
Tsai, W.-P., Feng, D., Pan, M., Beck, H., Lawson, K., Yang, Y., Liu, J., and
Shen, C.: From calibration to parameter learning: Harnessing the scaling
effects of big data in geoscientific modeling, Nat. Commun., 12, 5988,
https://doi.org/10.1038/s41467-021-26107-z, 2021.
Uriarte, M., Swenson, N. G., Chazdon, R. L., Comita, L. S., Kress, W. J.,
Erickson, D., Forero-Montaña, J., Zimmerman, J. K., and Thompson, J.:
Trait similarity, shared ancestry and the structure of neighbourhood
interactions in a subtropical wet forest: implications for community
assembly, Ecol. Lett., 13, 1503–1514,
https://doi.org/10.1111/j.1461-0248.2010.01541.x, 2010.
Violle, C., Enquist, B. J., McGill, B. J., Jiang, L., Albert, C. H.,
Hulshof, C., Jung, V., and Messier, J.: The return of the variance:
intraspecific variability in community ecology, Trends Ecol. Evol., 27,
244–252, https://doi.org/10.1016/j.tree.2011.11.014, 2012.
Wang, C., Duan, Q., Gong, W., Ye, A., Di, Z., and Miao, C.: An evaluation of
adaptive surrogate modeling based optimization with two benchmark problems,
Environ. Modell. Softw. 60, 167–179,
https://doi.org/10.1016/j.envsoft.2014.05.026, 2014.
Wang, S. S.-C., Qian, Y., Leung, L. R., and Zhang, Y.: Identifying Key
Drivers of Wildfires in the Contiguous US Using Machine Learning and Game
Theory Interpretation, Earth's Futur., 9, e2020EF001910,
https://doi.org/10.1029/2020ef001910, 2021.
Wang, S. S.-C., Qian, Y., Leung, L. R., and Zhang, Y.: Interpreting machine learning prediction of fire emissions and comparison with FireMIP process-based models, Atmos. Chem. Phys., 22, 3445–3468, https://doi.org/10.5194/acp-22-3445-2022, 2022.
Watson-Parris, D., Williams, A., Deaconu, L., and Stier, P.: Model calibration using ESEm v1.1.0 – an open, scalable Earth system emulator, Geosci. Model Dev., 14, 7659–7672, https://doi.org/10.5194/gmd-14-7659-2021, 2021.
Weng, E. S., Malyshev, S., Lichstein, J. W., Farrior, C. E., Dybzinski, R., Zhang, T., Shevliakova, E., and Pacala, S. W.: Scaling from individual trees to forests in an Earth system modeling framework using a mathematically tractable model of height-structured competition, Biogeosciences, 12, 2655–2694, https://doi.org/10.5194/bg-12-2655-2015, 2015.
Wilson, K., Goldstein, A., Falge, E., Aubinet, M., Baldocchi, D., Berbigier,
P., Bernhofer, C., Ceulemans, R., Dolman, H., Field, C., Grelle, A., Ibrom,
A., Law, B. E., Kowalski, A., Meyers, T., Moncrieff, J., Monson, R., Oechel,
W., Tenhunen, J., Valentini, R., and Verma, S.: Energy balance closure at
FLUXNET sites, Agr. Forest Meteorol., 113, 223–243,
https://doi.org/10.1016/s0168-1923(02)00109-0, 2002.
Wright, I. J., Reich, P. B., Cornelissen, J. H. C., Falster, D. S., Garnier,
E., Hikosaka, K., Lamont, B. B., Lee, W., Oleksyn, J., Osada, N., Poorter,
H., Villar, R., Warton, D. I., and Westoby, M.: Assessing the generality of
global leaf trait relationships, New Phytol., 166, 485–496,
https://doi.org/10.1111/j.1469-8137.2005.01349.x, 2005.
Xu, T. and Liang, F.: Machine learning for hydrologic sciences: An
introductory overview, Wiley Interdiscip. Rev. Water, 8, e1533,
https://doi.org/10.1002/wat2.1533, 2021.
Zhang, J., Bras, R. L., Longo, M., and Heartsill Scalley, T.: The impact of hurricane disturbances on a tropical forest: implementing a palm plant functional type and hurricane disturbance module in ED2-HuDi V1.0, Geosci. Model Dev., 15, 5107–5126, https://doi.org/10.5194/gmd-15-5107-2022, 2022.
Zhang, Y., Ma, J., Liang, S., Li, X., and Li, M.: An Evaluation of Eight
Machine Learning Regression Algorithms for Forest Aboveground Biomass
Estimation from Multiple Satellite Data Products, Remote Sens.-Basel, 12,
4015, https://doi.org/10.3390/rs12244015, 2020.
Zheng, Z., Curtis, J. H., Yao, Y., Gasparik, J. T., Anantharaj, V. G., Zhao,
L., West, M., and Riemer, N.: Estimating Submicron Aerosol Mixing State at
the Global Scale With Machine Learning and Earth System Modeling, Earth
Space Sci., 8, e2020EA001500, https://doi.org/10.1029/2020ea001500, 2021a.
Zheng, Z., West, M., Zhao, L., Ma, P.-L., Liu, X., and Riemer, N.: Quantifying the structural uncertainty of the aerosol mixing state representation in a modal model, Atmos. Chem. Phys., 21, 17727–17741, https://doi.org/10.5194/acp-21-17727-2021, 2021b.
Zheng, Z., Zhao, L., and Oleson, K. W.: Large model structural uncertainty
in global projections of urban heat waves, Nat. Commun., 12, 3736,
https://doi.org/10.1038/s41467-021-24113-9, 2021c.
Zhu, Q., Li, F., Riley, W. J., Xu, L., Zhao, L., Yuan, K., Wu, H., Gong, J., and Randerson, J.: Building a machine learning surrogate model for wildfire activities within a global Earth system model, Geosci. Model Dev., 15, 1899–1911, https://doi.org/10.5194/gmd-15-1899-2022, 2022.
Zuleta, D., Duque, A., Cardenas, D., Muller-Landau, H. C., and Davies, S.
J.: Drought-induced mortality patterns and rapid biomass recovery in a terra
firme forest in the Colombian Amazon, Ecology, 98, 2538–2546,
https://doi.org/10.1002/ecy.1950, 2017.
Short summary
Accurately modeling plant coexistence in vegetation demographic models like ELM-FATES is challenging. This study proposes a repeatable method that uses machine-learning-based surrogate models to optimize plant trait parameters in ELM-FATES. Our approach significantly improves plant coexistence modeling, thus reducing errors. It has important implications for modeling ecosystem dynamics in response to climate change.
Accurately modeling plant coexistence in vegetation demographic models like ELM-FATES is...
