Articles | Volume 13, issue 12
https://doi.org/10.5194/gmd-13-6265-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-13-6265-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Model description paper
| 
10 Dec 2020
Model description paper |
| 10 Dec 2020
| 10 Dec 2020
A fast and efficient MATLAB-based MPM solver: fMPMM-solver v1.1
Institute of Earth Sciences, University of Lausanne, 1015 Lausanne, Switzerland
Yury Alkhimenkov
Institute of Earth Sciences, University of Lausanne, 1015 Lausanne, Switzerland
Swiss Geocomputing Centre, University of Lausanne, 1015 Lausanne, Switzerland
Faculty of Mechanics and Mathematics, Lomonosov Moscow State University, Moscow, 119899, Russia
Michel Jaboyedoff
Institute of Earth Sciences, University of Lausanne, 1015 Lausanne, Switzerland
Swiss Geocomputing Centre, University of Lausanne, 1015 Lausanne, Switzerland
Yury Y. Podladchikov
Institute of Earth Sciences, University of Lausanne, 1015 Lausanne, Switzerland
Swiss Geocomputing Centre, University of Lausanne, 1015 Lausanne, Switzerland
Faculty of Mechanics and Mathematics, Lomonosov Moscow State University, Moscow, 119899, Russia
Related authors
Clément Hibert, François Noël, David Toe, Miloud Talib, Mathilde Desrues, Emmanuel Wyser, Ombeline Brenguier, Franck Bourrier, Renaud Toussaint, Jean-Philippe Malet, and Michel Jaboyedoff
Earth Surf. Dynam., 12, 641–656, https://doi.org/10.5194/esurf-12-641-2024, https://doi.org/10.5194/esurf-12-641-2024, 2024
Short summary
Short summary
Natural disasters such as landslides and rockfalls are mostly difficult to study because of the impossibility of making in situ measurements due to their destructive nature and spontaneous occurrence. Seismology is able to record the occurrence of such events from a distance and in real time. In this study, we show that, by using a machine learning approach, the mass and velocity of rockfalls can be estimated from the seismic signal they generate.
Emmanuel Wyser, Yury Alkhimenkov, Michel Jaboyedoff, and Yury Y. Podladchikov
Geosci. Model Dev., 14, 7749–7774, https://doi.org/10.5194/gmd-14-7749-2021, https://doi.org/10.5194/gmd-14-7749-2021, 2021
Short summary
Short summary
We propose an implementation of the material point method using graphical processing units (GPUs) to solve elastoplastic problems in three-dimensional configurations, such as the granular collapse or the slumping mechanics, i.e., landslide. The computational power of GPUs promotes fast code executions, compared to a traditional implementation using central processing units (CPUs). This allows us to study complex three-dimensional problems tackling high spatial resolution.
Yury Alkhimenkov and Yury Y. Podladchikov
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-160, https://doi.org/10.5194/gmd-2024-160, 2024
Revised manuscript under review for GMD
Short summary
Short summary
The Accelerated Pseudo-Transient (APT) method is an efficient way to solve partial differential equations, particularly well-suited for parallel computing. This paper explores the APT method's effectiveness in solving elastic, viscoelastic, and hydro-mechanical problems, focusing on quasi-static conditions in 1D, 2D, and 3D. The study examines the best numerical settings for fast and accurate solutions. The paper shows how the APT can handle complex problems in high-resolution models.
Charlotte Wolff, Marc-Henri Derron, Carlo Rivolta, and Michel Jaboyedoff
Geosci. Instrum. Method. Data Syst., 13, 225–248, https://doi.org/10.5194/gi-13-225-2024, https://doi.org/10.5194/gi-13-225-2024, 2024
Short summary
Short summary
The remote-sensing InSAR technique is vital for monitoring slope instabilities but requires understanding. This paper delves into differences between satellite and GB-InSAR. It offers a tool to determine the optimal GB-InSAR installation site, considering various technical, meteorological, and topographical factors. By generating detailed maps and simulating radar image characteristics, the tool eases the setup of monitoring campaigns for effective and accurate ground movement tracking.
Clément Hibert, François Noël, David Toe, Miloud Talib, Mathilde Desrues, Emmanuel Wyser, Ombeline Brenguier, Franck Bourrier, Renaud Toussaint, Jean-Philippe Malet, and Michel Jaboyedoff
Earth Surf. Dynam., 12, 641–656, https://doi.org/10.5194/esurf-12-641-2024, https://doi.org/10.5194/esurf-12-641-2024, 2024
Short summary
Short summary
Natural disasters such as landslides and rockfalls are mostly difficult to study because of the impossibility of making in situ measurements due to their destructive nature and spontaneous occurrence. Seismology is able to record the occurrence of such events from a distance and in real time. In this study, we show that, by using a machine learning approach, the mass and velocity of rockfalls can be estimated from the seismic signal they generate.
François Noël, Michel Jaboyedoff, Andrin Caviezel, Clément Hibert, Franck Bourrier, and Jean-Philippe Malet
Earth Surf. Dynam., 10, 1141–1164, https://doi.org/10.5194/esurf-10-1141-2022, https://doi.org/10.5194/esurf-10-1141-2022, 2022
Short summary
Short summary
Rockfall simulations are often performed to make sure infrastructure is safe. For that purpose, rockfall trajectory data are needed to calibrate the simulation models. In this paper, an affordable, flexible, and efficient trajectory reconstruction method is proposed. The method is tested by reconstructing trajectories from a full-scale rockfall experiment involving 2670 kg rocks and a flexible barrier. The results highlight improvements in precision and accuracy of the proposed method.
Ludovic Räss, Ivan Utkin, Thibault Duretz, Samuel Omlin, and Yuri Y. Podladchikov
Geosci. Model Dev., 15, 5757–5786, https://doi.org/10.5194/gmd-15-5757-2022, https://doi.org/10.5194/gmd-15-5757-2022, 2022
Short summary
Short summary
Continuum mechanics-based modelling of physical processes at large scale requires huge computational resources provided by massively parallel hardware such as graphical processing units. We present a suite of numerical algorithms, implemented using the Julia language, that efficiently leverages the parallelism. We demonstrate that our implementation is efficient, scalable and robust and showcase applications to various geophysical problems.
Emmanuel Wyser, Yury Alkhimenkov, Michel Jaboyedoff, and Yury Y. Podladchikov
Geosci. Model Dev., 14, 7749–7774, https://doi.org/10.5194/gmd-14-7749-2021, https://doi.org/10.5194/gmd-14-7749-2021, 2021
Short summary
Short summary
We propose an implementation of the material point method using graphical processing units (GPUs) to solve elastoplastic problems in three-dimensional configurations, such as the granular collapse or the slumping mechanics, i.e., landslide. The computational power of GPUs promotes fast code executions, compared to a traditional implementation using central processing units (CPUs). This allows us to study complex three-dimensional problems tackling high spatial resolution.
Martin Franz, Michel Jaboyedoff, Ryan P. Mulligan, Yury Podladchikov, and W. Andy Take
Nat. Hazards Earth Syst. Sci., 21, 1229–1245, https://doi.org/10.5194/nhess-21-1229-2021, https://doi.org/10.5194/nhess-21-1229-2021, 2021
Short summary
Short summary
A landslide-generated tsunami is a complex phenomenon that involves landslide dynamics, wave dynamics and their interaction. This phenomenon threatens numerous lives and infrastructures around the world. To assess this natural hazard, we developed an efficient numerical model able to simulate the landslide, the momentum transfer and the wave all at once. The good agreement between the numerical simulations and physical experiments validates our model and its novel momentum transfer approach.
Yury Alkhimenkov, Eva Caspari, Simon Lissa, and Beatriz Quintal
Solid Earth, 11, 855–871, https://doi.org/10.5194/se-11-855-2020, https://doi.org/10.5194/se-11-855-2020, 2020
Short summary
Short summary
We perform a three-dimensional numerical study of the fluid–solid deformation at the pore scale. We show that seismic wave velocities exhibit strong azimuth-, angle- and frequency-dependent behavior due to squirt flow between interconnected cracks. We conclude that the overall anisotropy mainly increases due to squirt flow, but in some specific planes it can locally decrease as well as increase, depending on the material properties.
Ludovic Räss, Aleksandar Licul, Frédéric Herman, Yury Y. Podladchikov, and Jenny Suckale
Geosci. Model Dev., 13, 955–976, https://doi.org/10.5194/gmd-13-955-2020, https://doi.org/10.5194/gmd-13-955-2020, 2020
Short summary
Short summary
Accurate predictions of future sea level rise require numerical models that predict rapidly deforming ice. Localised ice deformation can be captured numerically only with high temporal and spatial resolution. This paper’s goal is to propose a parallel FastICE solver for modelling ice deformation. Our model is particularly useful for improving our process-based understanding of localised ice deformation. Our solver reaches a parallel efficiency of 99 % on GPU-based supercomputers.
Martin Mergili, Michel Jaboyedoff, José Pullarello, and Shiva P. Pudasaini
Nat. Hazards Earth Syst. Sci., 20, 505–520, https://doi.org/10.5194/nhess-20-505-2020, https://doi.org/10.5194/nhess-20-505-2020, 2020
Short summary
Short summary
Computer simulations of complex landslide processes in mountain areas are important for informing risk management but are at the same time challenging in terms of parameterization and physical and numerical model implementation. Using the tool r.avaflow, we highlight the progress and the challenges with regard to such simulations on the example of the Piz Cengalo–Bondo landslide cascade in Switzerland, which started as an initial rockslide–rockfall and finally evolved into a debris flow.
Michel Jaboyedoff, Masahiro Chigira, Noriyuki Arai, Marc-Henri Derron, Benjamin Rudaz, and Ching-Ying Tsou
Earth Surf. Dynam., 7, 439–458, https://doi.org/10.5194/esurf-7-439-2019, https://doi.org/10.5194/esurf-7-439-2019, 2019
Short summary
Short summary
High-resolution digital elevation models (DEMs) can now be acquired using airborne laser scanners. This allows for a detailed analysis of the geometry of landslides. Several large landslides were triggered by Typhoon Talas in Japan in 2011. The comparison of pre- and post-DEMs allowed us to test a method of defining landslide failure surfaces before catastrophic movements. It provides new results about the curvature of the failure surface and the volume expansion of the deposit.
Jérémie Voumard, Antonio Abellán, Pierrick Nicolet, Ivanna Penna, Marie-Aurélie Chanut, Marc-Henri Derron, and Michel Jaboyedoff
Nat. Hazards Earth Syst. Sci., 17, 2093–2107, https://doi.org/10.5194/nhess-17-2093-2017, https://doi.org/10.5194/nhess-17-2093-2017, 2017
Short summary
Short summary
We discuss the challenges and limitations of surveying rock slope failures using 3-D reconstruction from images acquired from street view imagery (SVI) and processed with modern photogrammetric workflows. Despite some clear limitations and challenges, we demonstrate that this original approach could help obtain preliminary 3-D models of an area without on-field images. Furthermore, the pre-failure topography can be obtained for sites where it would not be available otherwise.
Antoine Guerin, Antonio Abellán, Battista Matasci, Michel Jaboyedoff, Marc-Henri Derron, and Ludovic Ravanel
Nat. Hazards Earth Syst. Sci., 17, 1207–1220, https://doi.org/10.5194/nhess-17-1207-2017, https://doi.org/10.5194/nhess-17-1207-2017, 2017
Short summary
Short summary
The coupling of terrestrial lidar scans acquired in 2011 and a photogrammetric model created from 30 old Web-retrieved images enabled reconstructing in 3-D the Drus west face before the 2005 rock avalanche and estimating the volume of this event. The volume is calculated as 292 680 m3 (±5.6 %). However, despite functioning well for the Drus (legendary peak), this method would have been difficult to implement on a less-well-known site with fewer images available to be collected and downloaded.
Pascal Horton, Charles Obled, and Michel Jaboyedoff
Hydrol. Earth Syst. Sci., 21, 3307–3323, https://doi.org/10.5194/hess-21-3307-2017, https://doi.org/10.5194/hess-21-3307-2017, 2017
Short summary
Short summary
The analogue method aims at forecasting precipitation by means of a statistical relationship with meteorological variables at a large scale, such as the general atmospheric circulation. A moving time window has been introduced here in order to allow finding better analogue situations at different hours of the day. This change resulted in a better analogy of the atmospheric circulation, with improved prediction skills, and even to a greater extent for days with heavy precipitation.
Ryan A. Kromer, Antonio Abellán, D. Jean Hutchinson, Matt Lato, Marie-Aurelie Chanut, Laurent Dubois, and Michel Jaboyedoff
Earth Surf. Dynam., 5, 293–310, https://doi.org/10.5194/esurf-5-293-2017, https://doi.org/10.5194/esurf-5-293-2017, 2017
Short summary
Short summary
We developed and tested an automated terrestrial laser scanning (ATLS) system with near-real-time change detection at the Séchilienne landslide. We monitored the landslide for a 6-week period collecting a point cloud every 30 min. We detected various slope processes including movement of scree material, pre-failure deformation of discrete rockfall events and deformation of the main landslide body. This system allows the study of slope processes a high level of temporal detail.
Roya Olyazadeh, Karen Sudmeier-Rieux, Michel Jaboyedoff, Marc-Henri Derron, and Sanjaya Devkota
Nat. Hazards Earth Syst. Sci., 17, 549–561, https://doi.org/10.5194/nhess-17-549-2017, https://doi.org/10.5194/nhess-17-549-2017, 2017
Short summary
Short summary
This work shows the progress and testing of an online–offline web-GIS application based on open-source technologies for landslide hazard and risk. It has satellite images as a base map in the offline mode and data collection in a centralized online database. The advantage of a mobile app coupled with satellite images over mapping in the office is improved identification of landslide type. This study was used for landslides in Nepal, but it can also be useful for other hazards like floods.
Zar Chi Aye, Roya Olyazadeh, Marc-Henri Derron, Michel Jaboyedoff, and Johann Lüthi
Nat. Hazards Earth Syst. Sci. Discuss., https://doi.org/10.5194/nhess-2017-85, https://doi.org/10.5194/nhess-2017-85, 2017
Revised manuscript not accepted
Short summary
Short summary
In this paper, we present an open-source, web-GIS application (RISKGIS), developed for students learning in risk management of geohazards with real case studies. The aim is for students to better understand and become familiarized with approaches used by experts as well as for teachers to better evaluate and monitor student learning. A series of practical exercises is carried out with students and feedback are collected to identify the possibility and applicability of RISKGIS learning platform.
Jacques Bechet, Julien Duc, Alexandre Loye, Michel Jaboyedoff, Nicolle Mathys, Jean-Philippe Malet, Sébastien Klotz, Caroline Le Bouteiller, Benjamin Rudaz, and Julien Travelletti
Earth Surf. Dynam., 4, 781–798, https://doi.org/10.5194/esurf-4-781-2016, https://doi.org/10.5194/esurf-4-781-2016, 2016
Short summary
Short summary
This paper describes the erosion processes of a small black marl catchment. It is based on terrestrial laser scanner digital elevation model campaigns. A detailed sediment budget is performed, leading to a seasonal sediment transport pattern described spatially and temporally. The link with precipitation intensities and duration is analysed, leading to a conceptual model of erosion that provides clear input for future research regarding potential impacts of climate change on erosion processes.
Céline Longchamp, Antonio Abellan, Michel Jaboyedoff, and Irene Manzella
Earth Surf. Dynam., 4, 743–755, https://doi.org/10.5194/esurf-4-743-2016, https://doi.org/10.5194/esurf-4-743-2016, 2016
Short summary
Short summary
The main objective of this research is to analyze rock avalanche dynamics by means of a detailed structural analysis of the deposits coming from data of 3-D measurements. The studied deposits are of different magnitude: (1) decimeter level scale laboratory experiments and (2) well-studied rock avalanches.
Filtering techniques were developed and applied to a 3-D dataset in order to detect fault structures present in the deposits and to propose kinematic mechanisms for the propagation.
Alexandre Loye, Michel Jaboyedoff, Joshua Isaac Theule, and Frédéric Liébault
Earth Surf. Dynam., 4, 489–513, https://doi.org/10.5194/esurf-4-489-2016, https://doi.org/10.5194/esurf-4-489-2016, 2016
Short summary
Short summary
The sediment supply and storage changes from major channels of the Manival catchment (French Alps) were surveyed periodically for 16 months to study the coupling between sediment dynamics and torrent responses in terms of debris flow events. The spatial and seasonal variability of sediment delivery is displayed and analysed. This study shows that monitoring the changes within a torrent’s in-channel storage and its debris supply can improve knowledge on recharge thresholds leading to debris flow.
Pierrick Nicolet, Michel Jaboyedoff, Catherine Cloutier, Giovanni B. Crosta, and Sébastien Lévy
Nat. Hazards Earth Syst. Sci., 16, 995–1004, https://doi.org/10.5194/nhess-16-995-2016, https://doi.org/10.5194/nhess-16-995-2016, 2016
Short summary
Short summary
When calculating the risk of railway or road users being killed by a natural hazard, one has to calculate a temporal spatial probability, i.e. the probability of a vehicle being in the path of the falling mass when the mass falls, or the expected number of hit vehicles in the case of an event. This paper discusses different methods used to calculate this probability, in particular regarding the consideration of the dimensions of the falling mass and of the vehicles.
Julie D'Amato, Didier Hantz, Antoine Guerin, Michel Jaboyedoff, Laurent Baillet, and Armand Mariscal
Nat. Hazards Earth Syst. Sci., 16, 719–735, https://doi.org/10.5194/nhess-16-719-2016, https://doi.org/10.5194/nhess-16-719-2016, 2016
Short summary
Short summary
The influence of meteorological conditions on rockfall occurrence has been often highlighted, but quantitative analyses are rare. A near-continuous survey of a limestone cliff has shown that the rockfall frequency can be multiplied by 7 during freeze-thaw episodes and 26 when the mean rainfall intensity (since the beginning of the rainfall episode) is higher than 5 mm h−1. Based on these results, a three-level scale has been proposed for predicting the temporal variations of rockfall frequency.
Z. C. Aye, M. Jaboyedoff, M. H. Derron, C. J. van Westen, H. Y. Hussin, R. L. Ciurean, S. Frigerio, and A. Pasuto
Nat. Hazards Earth Syst. Sci., 16, 85–101, https://doi.org/10.5194/nhess-16-85-2016, https://doi.org/10.5194/nhess-16-85-2016, 2016
Short summary
Short summary
This paper presents the development and application of a prototype web-GIS tool for risk analysis, in particular for floods and landslides, based on open-source software and web technologies. The aim is to assist experts (risk managers) in analysing the impacts and consequences of a certain hazard event in a considered region, contributing to open-source and research community in natural hazards and risk assessment. The tool is demonstrated using a regional data set of Fella River basin, Italy.
J. Bechet, J. Duc, M. Jaboyedoff, A. Loye, and N. Mathys
Hydrol. Earth Syst. Sci., 19, 1849–1855, https://doi.org/10.5194/hess-19-1849-2015, https://doi.org/10.5194/hess-19-1849-2015, 2015
Short summary
Short summary
High-resolution three-dimensional point clouds are used to analyse erosion processes at the millimetre scale. The processes analysed here play a role in the closure of cracks. We demonstrated how micro-scale infiltration can influence the degradation of soil surface by inducing downward mass movements that are not reversible. This development will aid in designing future experiments to analyse processes such as swelling, crack closure, micro-landslides, etc.
A. Guerin, D. Hantz, J.-P. Rossetti, and M. Jaboyedoff
Nat. Hazards Earth Syst. Sci. Discuss., https://doi.org/10.5194/nhessd-2-123-2014, https://doi.org/10.5194/nhessd-2-123-2014, 2014
Revised manuscript not accepted
M. Böhme, M.-H. Derron, and M. Jaboyedoff
Nat. Hazards Earth Syst. Sci. Discuss., https://doi.org/10.5194/nhessd-2-81-2014, https://doi.org/10.5194/nhessd-2-81-2014, 2014
Revised manuscript not accepted
P. Nicolet, L. Foresti, O. Caspar, and M. Jaboyedoff
Nat. Hazards Earth Syst. Sci., 13, 3169–3184, https://doi.org/10.5194/nhess-13-3169-2013, https://doi.org/10.5194/nhess-13-3169-2013, 2013
J. Voumard, O. Caspar, M.-H. Derron, and M. Jaboyedoff
Nat. Hazards Earth Syst. Sci., 13, 2763–2777, https://doi.org/10.5194/nhess-13-2763-2013, https://doi.org/10.5194/nhess-13-2763-2013, 2013
P. Horton, M. Jaboyedoff, B. Rudaz, and M. Zimmermann
Nat. Hazards Earth Syst. Sci., 13, 869–885, https://doi.org/10.5194/nhess-13-869-2013, https://doi.org/10.5194/nhess-13-869-2013, 2013
Related subject area
Numerical methods
The Measurement Error Proxy System Model: MEPSM v0.2
Numerical stabilization methods for level-set-based ice front migration
Modelling chemical advection during magma ascent
Consistent point data assimilation in Firedrake and Icepack
A Joint Reconstruction and Model Selection Approach for Large Scale Inverse Modeling
A computationally efficient parameterization of aerosol, cloud and precipitation pH for application at global and regional scale (EQSAM4Clim-v12)
Assessing the benefits of approximately exact step sizes for Picard and Newton solver in simulating ice flow (FEniCS-full-Stokes v.1.3.2)
Assessing effects of climate and technology uncertainties in large natural resource allocation problems
VISIR-2: ship weather routing in Python
Incremental analysis update (IAU) in the Model for Prediction Across Scales coupled with the Joint Effort for Data assimilation Integration (MPAS–JEDI 2.0.0)
Decision-making strategies implemented in SolFinder 1.0 to identify eco-efficient aircraft trajectories: application study in AirTraf 3.0
Developing meshing workflows in Gmsh v4.11 for the geologic uncertainty assessment of high-temperature aquifer thermal energy storage
Development and preliminary validation of a land surface image assimilation system based on the Common Land Model
NorSand4AI: a comprehensive triaxial test simulation database for NorSand constitutive model materials
Explicit stochastic advection algorithms for the regional scale particle-resolved atmospheric aerosol model WRF-PartMC (v1.0)
ParticleDA.jl v.1.0: a distributed particle-filtering data assimilation package
HETerogeneous vectorized or Parallel (HETPv1.0): an updated inorganic heterogeneous chemistry solver for the metastable-state NH4+–Na+–Ca2+–K+–Mg2+–SO42−–NO3−–Cl−–H2O system based on ISORROPIA II
Three-dimensional geological modelling of igneous intrusions in LoopStructural v1.5.10
Estimating volcanic ash emissions using retrieved satellite ash columns and inverse ash transport modeling using VolcanicAshInversion v1.2.1, within the operational eEMEP (emergency European Monitoring and Evaluation Programme) volcanic plume forecasting system (version rv4_17)
Accounting for uncertainties in forecasting tropical-cyclone-induced compound flooding
An automatic mesh generator for coupled 1D–2D hydrodynamic models
Numerical coupling of aerosol emissions, dry removal, and turbulent mixing in the E3SM Atmosphere Model version 1 (EAMv1) – Part 1: Dust budget analyses and the impacts of a revised coupling scheme
Numerical coupling of aerosol emissions, dry removal, and turbulent mixing in the E3SM Atmosphere Model version 1 (EAMv1) – Part 2: A semi-discrete error analysis framework for assessing coupling schemes
jsmetrics v0.2.0: a Python package for metrics and algorithms used to identify or characterise atmospheric jet streams
The Paleochrono-1.1 probabilistic model to derive optimized and consistent chronologies for several paleoclimatic sites
P3D-BRNS v1.0.0: a three-dimensional, multiphase, multicomponent, pore-scale reactive transport modelling package for simulating biogeochemical processes in subsurface environments
MinVoellmy v1: a lightweight model for simulating rapid mass movements based on a modified Voellmy rheology
Scalable Feature Extraction and Tracking (SCAFET): a general framework for feature extraction from large climate data sets
Sweep interpolation: a cost-effective semi-Lagrangian scheme in the Global Environmental Multiscale model
CHONK 1.0: landscape evolution framework: cellular automata meets graph theory
Perspectives of physics-based machine learning strategies for geoscientific applications governed by partial differential equations
Calibration of absorbing boundary layers for geoacoustic wave modeling in pseudo-spectral time-domain methods
Assimilation of snow water equivalent from AMSR2 and IMS satellite data utilizing the local ensemble transform Kalman filter
GeoINR 1.0: an implicit neural network approach to three-dimensional geological modelling
A comparison of Eulerian and Lagrangian methods for vertical particle transport in the water column
AutoQS v1: automatic parametrization of QuickSampling based on training images analysis
Implementation and application of ensemble optimal interpolation on an operational chemistry weather model for improving PM2.5 and visibility predictions
A dynamical core based on a discontinuous Galerkin method for higher-order finite-element sea ice modeling
GStatSim V1.0: a Python package for geostatistical interpolation and conditional simulation
Leveraging Google's Tensor Processing Units for tsunami-risk mitigation planning in the Pacific Northwest and beyond
An improved subgrid channel model with upwind-form artificial diffusion for river hydrodynamics and floodplain inundation simulation
A model instability issue in the National Centers for Environmental Prediction Global Forecast System version 16 and potential solutions
A comparison of 3-D spherical shell thermal convection results at low to moderate Rayleigh number using ASPECT (version 2.2.0) and CitcomS (version 3.3.1)
LISFLOOD-FP 8.1: new GPU-accelerated solvers for faster fluvial/pluvial flood simulations
Fast approximate Barnes interpolation: illustrated by Python-Numba implementation fast-barnes-py v1.0
Strategies for conservative and non-conservative monotone remapping on the sphere
Modeling large‐scale landform evolution with a stream power law for glacial erosion (OpenLEM v37): benchmarking experiments against a more process-based description of ice flow (iSOSIA v3.4.3)
A mixed finite-element discretisation of the shallow-water equations
Multifidelity Monte Carlo estimation for efficient uncertainty quantification in climate-related modeling
Massively parallel modeling and inversion of electrical resistivity tomography data using PFLOTRAN
Matt J. Fischer
Geosci. Model Dev., 17, 6745–6760, https://doi.org/10.5194/gmd-17-6745-2024, https://doi.org/10.5194/gmd-17-6745-2024, 2024
Short summary
Short summary
In paleoclimate research, proxy system models (PSMs) model chemical or biological systems which receive environmental input and output (e.g., geochemical signals). The environmental inputs are rarely noiseless, which causes problems when calibrating multi-input PSMs. Here a PSM is developed which includes generalized noise in both model inputs and outputs and prior information. A quasi-Bayesian method enhances the stability of the solution of the Measurement Error Proxy System Model.
Gong Cheng, Mathieu Morlighem, and G. Hilmar Gudmundsson
Geosci. Model Dev., 17, 6227–6247, https://doi.org/10.5194/gmd-17-6227-2024, https://doi.org/10.5194/gmd-17-6227-2024, 2024
Short summary
Short summary
We conducted a comprehensive analysis of the stabilization and reinitialization techniques currently employed in ISSM and Úa for solving level-set equations, specifically those related to the dynamic representation of moving ice fronts within numerical ice sheet models. Our results demonstrate that the streamline upwind Petrov–Galerkin (SUPG) method outperforms the other approaches. We found that excessively frequent reinitialization can lead to exceptionally high errors in simulations.
Hugo Dominguez, Nicolas Riel, and Pierre Lanari
Geosci. Model Dev., 17, 6105–6122, https://doi.org/10.5194/gmd-17-6105-2024, https://doi.org/10.5194/gmd-17-6105-2024, 2024
Short summary
Short summary
Predicting the behaviour of magmatic systems is important for understanding Earth's matter and heat transport. Numerical modelling is a technique that can predict complex systems at different scales of space and time by solving equations using various techniques. This study tests four algorithms to find the best way to transport the melt composition. The "weighted essentially non-oscillatory" algorithm emerges as the best choice, minimising errors and preserving system mass well.
Reuben W. Nixon-Hill, Daniel Shapero, Colin J. Cotter, and David A. Ham
Geosci. Model Dev., 17, 5369–5386, https://doi.org/10.5194/gmd-17-5369-2024, https://doi.org/10.5194/gmd-17-5369-2024, 2024
Short summary
Short summary
Scientists often use models to study complex processes, like the movement of ice sheets, and compare them to measurements for estimating quantities that are hard to measure. We highlight an approach that ensures accurate results from point data sources (e.g. height measurements) by evaluating the numerical solution at true point locations. This method improves accuracy, aids communication between scientists, and is well-suited for integration with specialised software that automates processes.
Malena Sabaté Landman, Julianne Chung, Jiahua Jiang, Scot Miller, and Arvind Saibaba
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-90, https://doi.org/10.5194/gmd-2024-90, 2024
Revised manuscript accepted for GMD
Short summary
Short summary
Making an informed decision about what prior information to incorporate or discard in an inverse model is important yet very challenging, as it is often not straightforward to distinguish between informative and non-informative variables. In this study, we develop a new approach for incorporating prior information in an inverse model using predictor variables, while simultaneously selecting the relevant predictor variables for the estimation of the unknown quantity of interest.
Swen Metzger, Samuel Rémy, Jason E. Williams, Vincent Huijnen, and Johannes Flemming
Geosci. Model Dev., 17, 5009–5021, https://doi.org/10.5194/gmd-17-5009-2024, https://doi.org/10.5194/gmd-17-5009-2024, 2024
Short summary
Short summary
EQSAM4Clim has recently been revised to provide an accurate and efficient method for calculating the acidity of atmospheric particles. It is based on an analytical concept that is sufficiently fast and free of numerical noise, which makes it attractive for air quality forecasting. Version 12 allows the calculation of aerosol composition based on the gas–liquid–solid and the reduced gas–liquid partitioning with the associated water uptake for both cases, including the acidity of the aerosols.
Niko Schmidt, Angelika Humbert, and Thomas Slawig
Geosci. Model Dev., 17, 4943–4959, https://doi.org/10.5194/gmd-17-4943-2024, https://doi.org/10.5194/gmd-17-4943-2024, 2024
Short summary
Short summary
Future sea-level rise is of big significance for coastal regions. The melting and acceleration of glaciers plays a major role in sea-level change. Computer simulation of glaciers costs a lot of computational resources. In this publication, we test a new way of simulating glaciers. This approach produces the same results but has the advantage that it needs much less computation time. As simulations can be obtained with fewer computation resources, higher resolution and physics become affordable.
Jevgenijs Steinbuks, Yongyang Cai, Jonas Jaegermeyr, and Thomas W. Hertel
Geosci. Model Dev., 17, 4791–4819, https://doi.org/10.5194/gmd-17-4791-2024, https://doi.org/10.5194/gmd-17-4791-2024, 2024
Short summary
Short summary
This paper applies a cutting-edge numerical method, SCEQ, to show how uncertain climate change and technological progress affect the future utilization of the world's scarce land resources. The paper's key insight is to illustrate how much global cropland will expand when future crop yields are unknown. The study finds the range of outcomes for land use change to be smaller when using this novel method compared to existing deterministic models.
Gianandrea Mannarini, Mario Leonardo Salinas, Lorenzo Carelli, Nicola Petacco, and Josip Orović
Geosci. Model Dev., 17, 4355–4382, https://doi.org/10.5194/gmd-17-4355-2024, https://doi.org/10.5194/gmd-17-4355-2024, 2024
Short summary
Short summary
Ship weather routing has the potential to reduce CO2 emissions, but it currently lacks open and verifiable research. The Python-refactored VISIR-2 model considers currents, waves, and wind to optimise routes. The model was validated, and its computational performance is quasi-linear. For a ferry sailing in the Mediterranean Sea, VISIR-2 yields the largest percentage emission savings for upwind navigation. Given the vessel performance curve, the model is generalisable across various vessel types.
Soyoung Ha, Jonathan J. Guerrette, Ivette Hernández Baños, William C. Skamarock, and Michael G. Duda
Geosci. Model Dev., 17, 4199–4211, https://doi.org/10.5194/gmd-17-4199-2024, https://doi.org/10.5194/gmd-17-4199-2024, 2024
Short summary
Short summary
To mitigate the imbalances in the initial conditions, this study introduces our recent implementation of the incremental analysis update (IAU) in the Model for Prediction Across Scales – Atmospheric (MPAS-A) component coupled with the Joint Effort for Data assimilation Integration (JEDI) through the cycling system. A month-long cycling run demonstrates the successful implementation of the IAU capability in the MPAS–JEDI cycling system.
Federica Castino, Feijia Yin, Volker Grewe, Hiroshi Yamashita, Sigrun Matthes, Simone Dietmüller, Sabine Baumann, Manuel Soler, Abolfazl Simorgh, Maximilian Mendiguchia Meuser, Florian Linke, and Benjamin Lührs
Geosci. Model Dev., 17, 4031–4052, https://doi.org/10.5194/gmd-17-4031-2024, https://doi.org/10.5194/gmd-17-4031-2024, 2024
Short summary
Short summary
We introduce SolFinder 1.0, a decision-making tool to select trade-offs between different objective functions for optimal aircraft trajectories, including fuel use, flight time, NOx emissions, contrail distance, and climate impact. The module is included in the AirTraf 3.0 submodel and uses weather conditions simulated by the EMAC atmospheric model. This paper focuses on the ability of SolFinder to identify eco-efficient trajectories, reducing a flight's climate impact at limited cost penalties.
Ali Dashti, Jens C. Grimmer, Christophe Geuzaine, Florian Bauer, and Thomas Kohl
Geosci. Model Dev., 17, 3467–3485, https://doi.org/10.5194/gmd-17-3467-2024, https://doi.org/10.5194/gmd-17-3467-2024, 2024
Short summary
Short summary
This study developed new meshing workflows to enable the automatic generation of meshes that follow geological models. The workflow allows for importing several geological models as input for Gmsh and later exporting the same number of high-quality meshes. This way, geological uncertainty is directly included in the numerical simulations. This study evaluates the impact of the geological uncertainty on thermohydraulic performance of two reservoirs for high-temperature heat storage applications.
Wangbin Shen, Zhaohui Lin, Zhengkun Qin, and Juan Li
Geosci. Model Dev., 17, 3447–3465, https://doi.org/10.5194/gmd-17-3447-2024, https://doi.org/10.5194/gmd-17-3447-2024, 2024
Short summary
Short summary
In this study, a land surface image assimilation system capable of optimizing the spatial structure of the background field is constructed by introducing the curvelet analysis method and taking the similarity of image structure as a weak constraint. The findings demonstrate that the assimilation of surface soil moisture observation images effectively and reasonably enhances the spatial structure of soil moisture analysis field.
Luan Carlos de Sena Monteiro Ozelim, Michéle Dal Toé Casagrande, and André Luís Brasil Cavalcante
Geosci. Model Dev., 17, 3175–3197, https://doi.org/10.5194/gmd-17-3175-2024, https://doi.org/10.5194/gmd-17-3175-2024, 2024
Short summary
Short summary
The paper addresses synthetic dataset challenges in nonlinear constitutive modeling of soils, providing two datasets: one with 2000 soil types, 40 test conditions each (160 000 triaxial tests), and a second with 2048 soil types, 42 test conditions each (172 032 triaxial tests). Each dataset is a 4000×10 matrix applicable for multivariate forecasting and geotechnical simulations. In addition, a new Python code is introduced, empowering researchers to leverage Python packages for NorSand analyses.
Jeffrey Henry Curtis, Nicole Riemer, and Matthew West
EGUsphere, https://doi.org/10.5194/egusphere-2024-825, https://doi.org/10.5194/egusphere-2024-825, 2024
Short summary
Short summary
This paper introduces a numerical method for simulating particle-based aerosol transport in atmospheric models. We detail the various advection order method’s numerical properties and demonstrate its implementation in a 3D weather prediction model (WRF) for the first time. Particle-based techniques improve the accuracy of aerosol size and composition predictions, which are key for aerosol-cloud and aerosol-radiation interactions.
Daniel Giles, Matthew M. Graham, Mosè Giordano, Tuomas Koskela, Alexandros Beskos, and Serge Guillas
Geosci. Model Dev., 17, 2427–2445, https://doi.org/10.5194/gmd-17-2427-2024, https://doi.org/10.5194/gmd-17-2427-2024, 2024
Short summary
Short summary
Digital twins of physical and human systems informed by real-time data are becoming ubiquitous across a wide range of settings. Progress for researchers is currently limited by a lack of tools to run these models effectively and efficiently. A key challenge is the optimal use of high-performance computing environments. The work presented here focuses on a developed open-source software platform which aims to improve this usage, with an emphasis placed on flexibility, efficiency, and scalability.
Stefan J. Miller, Paul A. Makar, and Colin J. Lee
Geosci. Model Dev., 17, 2197–2219, https://doi.org/10.5194/gmd-17-2197-2024, https://doi.org/10.5194/gmd-17-2197-2024, 2024
Short summary
Short summary
This work outlines a new solver written in Fortran to calculate the partitioning of metastable aerosols at thermodynamic equilibrium based on the forward algorithms of ISORROPIA II. The new code includes numerical improvements that decrease the computational speed (compared to ISORROPIA II) while improving the accuracy of the partitioning solution.
Fernanda Alvarado-Neves, Laurent Ailleres, Lachlan Grose, Alexander R. Cruden, and Robin Armit
Geosci. Model Dev., 17, 1975–1993, https://doi.org/10.5194/gmd-17-1975-2024, https://doi.org/10.5194/gmd-17-1975-2024, 2024
Short summary
Short summary
Previous work has demonstrated that adding geological knowledge to modelling methods creates more accurate and reliable models. Following this reasoning, we added constraints from magma emplacement mechanisms into existing modelling frameworks to improve the 3D characterisation of igneous intrusions. We tested the method on synthetic and real-world case studies, and the results show that our method can reproduce intrusion morphologies with no manual processing and using realistic datasets.
André R. Brodtkorb, Anna Benedictow, Heiko Klein, Arve Kylling, Agnes Nyiri, Alvaro Valdebenito, Espen Sollum, and Nina Kristiansen
Geosci. Model Dev., 17, 1957–1974, https://doi.org/10.5194/gmd-17-1957-2024, https://doi.org/10.5194/gmd-17-1957-2024, 2024
Short summary
Short summary
It is vital to know the extent and concentration of volcanic ash in the atmosphere during a volcanic eruption. Whilst satellite imagery may give an estimate of the ash right now (assuming no cloud coverage), we also need to know where it will be in the coming hours. This paper presents a method for estimating parameters for a volcanic eruption based on satellite observations of ash in the atmosphere. The software package is open source and applicable to similar inversion scenarios.
Kees Nederhoff, Maarten van Ormondt, Jay Veeramony, Ap van Dongeren, José Antonio Álvarez Antolínez, Tim Leijnse, and Dano Roelvink
Geosci. Model Dev., 17, 1789–1811, https://doi.org/10.5194/gmd-17-1789-2024, https://doi.org/10.5194/gmd-17-1789-2024, 2024
Short summary
Short summary
Forecasting tropical cyclones and their flooding impact is challenging. Our research introduces the Tropical Cyclone Forecasting Framework (TC-FF), enhancing cyclone predictions despite uncertainties. TC-FF generates global wind and flood scenarios, valuable even in data-limited regions. Applied to cases like Cyclone Idai, it showcases potential in bettering disaster preparation, marking progress in handling cyclone threats.
Younghun Kang and Ethan J. Kubatko
Geosci. Model Dev., 17, 1603–1625, https://doi.org/10.5194/gmd-17-1603-2024, https://doi.org/10.5194/gmd-17-1603-2024, 2024
Short summary
Short summary
Models used to simulate the flow of coastal and riverine waters, including flooding, require a geometric representation (or mesh) of geographic features that exhibit a range of disparate spatial scales from large, open waters to small, narrow channels. Representing these features in an accurate way without excessive computational overhead presents a challenge. Here, we develop an automatic mesh generation tool to help address this challenge. Our results demonstrate the efficacy of our approach.
Hui Wan, Kai Zhang, Christopher J. Vogl, Carol S. Woodward, Richard C. Easter, Philip J. Rasch, Yan Feng, and Hailong Wang
Geosci. Model Dev., 17, 1387–1407, https://doi.org/10.5194/gmd-17-1387-2024, https://doi.org/10.5194/gmd-17-1387-2024, 2024
Short summary
Short summary
Sophisticated numerical models of the Earth's atmosphere include representations of many physical and chemical processes. In numerical simulations, these processes need to be calculated in a certain sequence. This study reveals the weaknesses of the sequence of calculations used for aerosol processes in a global atmosphere model. A revision of the sequence is proposed and its impacts on the simulated global aerosol climatology are evaluated.
Christopher J. Vogl, Hui Wan, Carol S. Woodward, and Quan M. Bui
Geosci. Model Dev., 17, 1409–1428, https://doi.org/10.5194/gmd-17-1409-2024, https://doi.org/10.5194/gmd-17-1409-2024, 2024
Short summary
Short summary
Generally speaking, accurate climate simulation requires an accurate evolution of the underlying mathematical equations on large computers. The equations are typically formulated and evolved in process groups. Process coupling refers to how the evolution of each group is combined with that of other groups to evolve the full set of equations for the whole atmosphere. This work presents a mathematical framework to evaluate methods without the need to first implement the methods.
Tom Keel, Chris Brierley, and Tamsin Edwards
Geosci. Model Dev., 17, 1229–1247, https://doi.org/10.5194/gmd-17-1229-2024, https://doi.org/10.5194/gmd-17-1229-2024, 2024
Short summary
Short summary
Jet streams are an important control on surface weather as their speed and shape can modify the properties of weather systems. Establishing trends in the operation of jet streams may provide some indication of the future of weather in a warming world. Despite this, it has not been easy to establish trends, as many methods have been used to characterise them in data. We introduce a tool containing various implementations of jet stream statistics and algorithms that works in a standardised manner.
Frédéric Parrenin, Marie Bouchet, Christo Buizert, Emilie Capron, Ellen Corrick, Russell Drysdale, Kenji Kawamura, Amaëlle Landais, Robert Mulvaney, Ikumi Oyabu, and Sune Rasmussen
EGUsphere, https://doi.org/10.5194/egusphere-2023-2911, https://doi.org/10.5194/egusphere-2023-2911, 2024
Short summary
Short summary
The Paleochrono1 probablistic dating model allows to derive a common and optimized chronology for several paleoclimatic sites from various archives (ice cores, speleothems, marine cores, lake cores, etc.). It combines prior sedimentation scenarios with chronological information such as dated horizons, dated intervals, stratigraphic links and (for ice cores) Delta-depth observations. Paleochrono1 is available under the MIT open-source license.
Amir Golparvar, Matthias Kästner, and Martin Thullner
Geosci. Model Dev., 17, 881–898, https://doi.org/10.5194/gmd-17-881-2024, https://doi.org/10.5194/gmd-17-881-2024, 2024
Short summary
Short summary
Coupled reaction transport modelling is an established and beneficial method for studying natural and synthetic porous material, with applications ranging from industrial processes to natural decompositions in terrestrial environments. Up to now, a framework that explicitly considers the porous structure (e.g. from µ-CT images) for modelling the transport of reactive species is missing. We presented a model that overcomes this limitation and represents a novel numerical simulation toolbox.
Stefan Hergarten
Geosci. Model Dev., 17, 781–794, https://doi.org/10.5194/gmd-17-781-2024, https://doi.org/10.5194/gmd-17-781-2024, 2024
Short summary
Short summary
The Voellmy rheology has been widely used for simulating snow and rock avalanches. Recently, a modified version of this rheology was proposed, which turned out to be able to predict the observed long runout of large rock avalanches theoretically. The software MinVoellmy presented here is the first numerical implementation of the modified rheology. It consists of MATLAB and Python classes, where simplicity and parsimony were the design goals.
Arjun Babu Nellikkattil, Danielle Lemmon, Travis Allen O'Brien, June-Yi Lee, and Jung-Eun Chu
Geosci. Model Dev., 17, 301–320, https://doi.org/10.5194/gmd-17-301-2024, https://doi.org/10.5194/gmd-17-301-2024, 2024
Short summary
Short summary
This study introduces a new computational framework called Scalable Feature Extraction and Tracking (SCAFET), designed to extract and track features in climate data. SCAFET stands out by using innovative shape-based metrics to identify features without relying on preconceived assumptions about the climate model or mean state. This approach allows more accurate comparisons between different models and scenarios.
Mohammad Mortezazadeh, Jean-François Cossette, Ashu Dastoor, Jean de Grandpré, Irena Ivanova, and Abdessamad Qaddouri
Geosci. Model Dev., 17, 335–346, https://doi.org/10.5194/gmd-17-335-2024, https://doi.org/10.5194/gmd-17-335-2024, 2024
Short summary
Short summary
The interpolation process is the most computationally expensive step of the semi-Lagrangian (SL) approach. In this paper we implement a new interpolation scheme into the semi-Lagrangian approach which has the same computational cost as a third-order polynomial scheme but with the accuracy of a fourth-order interpolation scheme. This improvement is achieved by using two third-order backward and forward polynomial interpolation schemes in two consecutive time steps.
Boris Gailleton, Luca C. Malatesta, Guillaume Cordonnier, and Jean Braun
Geosci. Model Dev., 17, 71–90, https://doi.org/10.5194/gmd-17-71-2024, https://doi.org/10.5194/gmd-17-71-2024, 2024
Short summary
Short summary
This contribution presents a new method to numerically explore the evolution of mountain ranges and surrounding areas. The method helps in monitoring with details on the timing and travel path of material eroded from the mountain ranges. It is particularly well suited to studies juxtaposing different domains – lakes or multiple rock types, for example – and enables the combination of different processes.
Denise Degen, Daniel Caviedes Voullième, Susanne Buiter, Harrie-Jan Hendricks Franssen, Harry Vereecken, Ana González-Nicolás, and Florian Wellmann
Geosci. Model Dev., 16, 7375–7409, https://doi.org/10.5194/gmd-16-7375-2023, https://doi.org/10.5194/gmd-16-7375-2023, 2023
Short summary
Short summary
In geosciences, we often use simulations based on physical laws. These simulations can be computationally expensive, which is a problem if simulations must be performed many times (e.g., to add error bounds). We show how a novel machine learning method helps to reduce simulation time. In comparison to other approaches, which typically only look at the output of a simulation, the method considers physical laws in the simulation itself. The method provides reliable results faster than standard.
Carlos Spa, Otilio Rojas, and Josep de la Puente
Geosci. Model Dev., 16, 7237–7252, https://doi.org/10.5194/gmd-16-7237-2023, https://doi.org/10.5194/gmd-16-7237-2023, 2023
Short summary
Short summary
This paper develops a calibration methodology of all absorbing techniques typically used by Fourier pseudo-spectral time-domain (PSTD) methods for geoacoustic wave simulations. The main contributions of the paper are (a) an implementation and quantitative comparison of all absorbing techniques available for PSTD methods through a simple and robust numerical experiment, and (b) a validation of these absorbing techniques in several 3-D seismic scenarios with gradual heterogeneity complexities.
Joonlee Lee, Myong-In Lee, Sunlae Tak, Eunkyo Seo, and Yong-Keun Lee
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-221, https://doi.org/10.5194/gmd-2023-221, 2023
Revised manuscript accepted for GMD
Short summary
Short summary
We developed a snow assimilation system using satellite data based on a land surface model. The snow states produced by the assimilation system demonstrate high performance in all regions, including transition regions, compared to the satellite data and land model. As snow significantly influences energy and water balance at the atmosphere-land boundary, this approach allows for a more accurate prediction of atmospheric conditions by realistically representing atmosphere-land interactions.
Michael Hillier, Florian Wellmann, Eric A. de Kemp, Boyan Brodaric, Ernst Schetselaar, and Karine Bédard
Geosci. Model Dev., 16, 6987–7012, https://doi.org/10.5194/gmd-16-6987-2023, https://doi.org/10.5194/gmd-16-6987-2023, 2023
Short summary
Short summary
Neural networks can be used effectively to model three-dimensional geological structures from point data, sampling geological interfaces, units, and structural orientations. Existing neural network approaches for this type of modelling are advanced by the efficient incorporation of unconformities, new knowledge inputs, and improved data fitting techniques. These advances permit the modelling of more complex geology in diverse geological settings, different-sized areas, and various data regimes.
Tor Nordam, Ruben Kristiansen, Raymond Nepstad, Erik van Sebille, and Andy M. Booth
Geosci. Model Dev., 16, 5339–5363, https://doi.org/10.5194/gmd-16-5339-2023, https://doi.org/10.5194/gmd-16-5339-2023, 2023
Short summary
Short summary
We describe and compare two common methods, Eulerian and Lagrangian models, used to simulate the vertical transport of material in the ocean. They both solve the same transport problems but use different approaches for representing the underlying equations on the computer. The main focus of our study is on the numerical accuracy of the two approaches. Our results should be useful for other researchers creating or using these types of transport models.
Mathieu Gravey and Grégoire Mariethoz
Geosci. Model Dev., 16, 5265–5279, https://doi.org/10.5194/gmd-16-5265-2023, https://doi.org/10.5194/gmd-16-5265-2023, 2023
Short summary
Short summary
Multiple‐point geostatistics are widely used to simulate complex spatial structures based on a training image. The use of these methods relies on the possibility of finding optimal training images and parametrization of the simulation algorithms. Here, we propose finding an optimal set of parameters using only the training image as input. The main advantage of our approach is to remove the risk of overfitting an objective function.
Siting Li, Ping Wang, Hong Wang, Yue Peng, Zhaodong Liu, Wenjie Zhang, Hongli Liu, Yaqiang Wang, Huizheng Che, and Xiaoye Zhang
Geosci. Model Dev., 16, 4171–4191, https://doi.org/10.5194/gmd-16-4171-2023, https://doi.org/10.5194/gmd-16-4171-2023, 2023
Short summary
Short summary
Optimizing the initial state of atmospheric chemistry model input is one of the most essential methods to improve forecast accuracy. Considering the large computational load of the model, we introduce an ensemble optimal interpolation scheme (EnOI) for operational use and efficient updating of the initial fields of chemical components. The results suggest that EnOI provides a practical and cost-effective technique for improving the accuracy of chemical weather numerical forecasts.
Thomas Richter, Véronique Dansereau, Christian Lessig, and Piotr Minakowski
Geosci. Model Dev., 16, 3907–3926, https://doi.org/10.5194/gmd-16-3907-2023, https://doi.org/10.5194/gmd-16-3907-2023, 2023
Short summary
Short summary
Sea ice covers not only the pole regions but affects the weather and climate globally. For example, its white surface reflects more sunlight than land. The oceans around the poles are therefore kept cool, which affects the circulation in the oceans worldwide. Simulating the behavior and changes in sea ice on a computer is, however, very difficult. We propose a new computer simulation that better models how cracks in the ice change over time and show this by comparing to other simulations.
Emma J. MacKie, Michael Field, Lijing Wang, Zhen Yin, Nathan Schoedl, Matthew Hibbs, and Allan Zhang
Geosci. Model Dev., 16, 3765–3783, https://doi.org/10.5194/gmd-16-3765-2023, https://doi.org/10.5194/gmd-16-3765-2023, 2023
Short summary
Short summary
Earth scientists often have to fill in spatial gaps in measurements. This gap-filling or interpolation can be accomplished with geostatistical methods, where the statistical relationships between measurements are used to inform how these gaps should be filled. Despite the broad utility of these methods, there are few freely available geostatistical software applications. We present GStatSim, a Python package for performing different geostatistical interpolation methods.
Ian Madden, Simone Marras, and Jenny Suckale
Geosci. Model Dev., 16, 3479–3500, https://doi.org/10.5194/gmd-16-3479-2023, https://doi.org/10.5194/gmd-16-3479-2023, 2023
Short summary
Short summary
To aid risk managers who may wish to rapidly assess tsunami risk but may lack high-performance computing infrastructure, we provide an accessible software package able to rapidly model tsunami inundation over real topography by leveraging Google's Tensor Processing Unit, a high-performance hardware. Minimally trained users can take advantage of the rapid modeling abilities provided by this package via a web browser thanks to the ease of use of Google Cloud Platform.
Youtong Rong, Paul Bates, and Jeffrey Neal
Geosci. Model Dev., 16, 3291–3311, https://doi.org/10.5194/gmd-16-3291-2023, https://doi.org/10.5194/gmd-16-3291-2023, 2023
Short summary
Short summary
A novel subgrid channel (SGC) model is developed for river–floodplain modelling, allowing utilization of subgrid-scale bathymetric information while performing computations on relatively coarse grids. By including adaptive artificial diffusion, potential numerical instability, which the original SGC solver had, in low-friction regions such as urban areas is addressed. Evaluation of the new SGC model through structured tests confirmed that the accuracy and stability have improved.
Xiaqiong Zhou and Hann-Ming Henry Juang
Geosci. Model Dev., 16, 3263–3274, https://doi.org/10.5194/gmd-16-3263-2023, https://doi.org/10.5194/gmd-16-3263-2023, 2023
Short summary
Short summary
The National Centers for Environmental Prediction Global Forecast System version 16 experienced model instability failures in real-time runs resolved by increasing the minimum thickness depth parameter. Further investigation revealed that the issue was caused by the advection of geopotential heights at the model's layer interfaces. By replacing high-order boundary conditions with zero-gradient boundary conditions for interface-wind reconstruction, the instability was effectively addressed.
Grant T. Euen, Shangxin Liu, Rene Gassmöller, Timo Heister, and Scott D. King
Geosci. Model Dev., 16, 3221–3239, https://doi.org/10.5194/gmd-16-3221-2023, https://doi.org/10.5194/gmd-16-3221-2023, 2023
Short summary
Short summary
Due to the increasing availability of high-performance computing over the past few decades, numerical models have become an important tool for research. Here we test two geodynamic codes that produce such models: ASPECT, a newer code, and CitcomS, an older one. We show that they produce solutions that are extremely close. As methods and codes become more complex over time, showing reproducibility allows us to seamlessly link previously known information to modern methodologies.
Mohammad Kazem Sharifian, Georges Kesserwani, Alovya Ahmed Chowdhury, Jeffrey Neal, and Paul Bates
Geosci. Model Dev., 16, 2391–2413, https://doi.org/10.5194/gmd-16-2391-2023, https://doi.org/10.5194/gmd-16-2391-2023, 2023
Short summary
Short summary
This paper describes a new release of the LISFLOOD-FP model for fast and efficient flood simulations. It features a new non-uniform grid generator that uses multiwavelet analyses to sensibly coarsens the resolutions where the local topographic variations are smooth. Moreover, the model is parallelised on the graphical processing units (GPUs) to further boost computational efficiency. The performance of the model is assessed for five real-world case studies, noting its potential applications.
Bruno K. Zürcher
Geosci. Model Dev., 16, 1697–1711, https://doi.org/10.5194/gmd-16-1697-2023, https://doi.org/10.5194/gmd-16-1697-2023, 2023
Short summary
Short summary
We present a novel algorithm to efficiently compute Barnes interpolation, which is a method for transforming data values recorded at irregularly spaced points into a corresponding regular grid. In contrast to naive implementations with an algorithmic complexity that depends on the product of the number of sample points and the number of grid points, our approach reduces this dependency to their sum.
David H. Marsico and Paul A. Ullrich
Geosci. Model Dev., 16, 1537–1551, https://doi.org/10.5194/gmd-16-1537-2023, https://doi.org/10.5194/gmd-16-1537-2023, 2023
Short summary
Short summary
Climate models involve several different components, such as the atmosphere, ocean, and land models. Information needs to be exchanged, or remapped, between these models, and devising algorithms for performing this exchange is important for ensuring the accuracy of climate simulations. In this paper, we examine the efficacy of several traditional and novel approaches to remapping on the sphere and demonstrate where our approaches offer improvement.
Moritz Liebl, Jörg Robl, Stefan Hergarten, David Lundbek Egholm, and Kurt Stüwe
Geosci. Model Dev., 16, 1315–1343, https://doi.org/10.5194/gmd-16-1315-2023, https://doi.org/10.5194/gmd-16-1315-2023, 2023
Short summary
Short summary
In this study, we benchmark a topography-based model for glacier erosion (OpenLEM) with a well-established process-based model (iSOSIA). Our experiments show that large-scale erosion patterns and particularly the transformation of valley length geometry from fluvial to glacial conditions are very similar in both models. This finding enables the application of OpenLEM to study the influence of climate and tectonics on glaciated mountains with reasonable computational effort on standard PCs.
James Kent, Thomas Melvin, and Golo Albert Wimmer
Geosci. Model Dev., 16, 1265–1276, https://doi.org/10.5194/gmd-16-1265-2023, https://doi.org/10.5194/gmd-16-1265-2023, 2023
Short summary
Short summary
This paper introduces the Met Office's new shallow water model. The shallow water model is a building block towards the Met Office's new atmospheric dynamical core. The shallow water model is tested on a number of standard spherical shallow water test cases, including flow over mountains and unstable jets. Results show that the model produces similar results to other shallow water models in the literature.
Anthony Gruber, Max Gunzburger, Lili Ju, Rihui Lan, and Zhu Wang
Geosci. Model Dev., 16, 1213–1229, https://doi.org/10.5194/gmd-16-1213-2023, https://doi.org/10.5194/gmd-16-1213-2023, 2023
Short summary
Short summary
This work applies a novel technical tool, multifidelity Monte Carlo (MFMC) estimation, to three climate-related benchmark experiments involving oceanic, atmospheric, and glacial modeling. By considering useful quantities such as maximum sea height and total (kinetic) energy, we show that MFMC leads to predictions which are more accurate and less costly than those obtained by standard methods. This suggests MFMC as a potential drop-in replacement for estimation in realistic climate models.
Piyoosh Jaysaval, Glenn E. Hammond, and Timothy C. Johnson
Geosci. Model Dev., 16, 961–976, https://doi.org/10.5194/gmd-16-961-2023, https://doi.org/10.5194/gmd-16-961-2023, 2023
Short summary
Short summary
We present a robust and highly scalable implementation of numerical forward modeling and inversion algorithms for geophysical electrical resistivity tomography data. The implementation is publicly available and developed within the framework of PFLOTRAN (http://www.pflotran.org), an open-source, state-of-the-art massively parallel subsurface flow and transport simulation code. The paper details all the theoretical and implementation aspects of the new capabilities along with test examples.
Cited articles
Abe, K., Soga, K., and Bandara, S.: Material point method for coupled
hydromechanical problems, J. Geotechn. Geoenviron.
Eng., 140, 04013033, https://doi.org/10.1061/(ASCE)GT.1943-5606.0001011, 2014. a
Anderson Jr., C. E.: An overview of the theory of hydrocodes, Int.
J. Impact Eng., 5, 33–59, 1987. a
Bandara, S. and Soga, K.: Coupling of soil deformation and pore fluid flow
using material point method, Comput. Geotech., 63, 199–214, 2015. a
Bardenhagen, S., Brackbill, J., and Sulsky, D.: The material-point method for
granular materials, Comput. Method. Appl. M.,
187, 529–541, 2000. a
Baumgarten, A. S. and Kamrin, K.: A general fluid–sediment mixture model and
constitutive theory validated in many flow regimes, J. Fluid
Mechan., 861, 721–764, 2019. a
Beuth, L., Benz, T., Vermeer, P. A., and Więckowski, Z.: Large
deformation analysis using a quasi-static material point method, J.
Theor. Appl. Mechan., 38, 45–60, 2008. a
Coombs, W. M., Augarde, C. E., Brennan, A. J., Brown, M. J., Charlton, T. J.,
Knappett, J. A., Motlagh, Y. G., and Wang, L.: On Lagrangian mechanics and
the implicit material point method for large deformation elasto-plasticity,
Comput. Method. Appl. Mechan., 358, 112622, https://doi.org/10.1016/j.cma.2019.112622, 2020. a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p
Cortis, M., Coombs, W., Augarde, C., Brown, M., Brennan, A., and Robinson, S.:
Imposition of essential boundary conditions in the material point method,
Int. J. Num. Method., 113, 130–152,
2018. a
Davis, T. A.: Suite Sparse,
available at: https://people.engr.tamu.edu/davis/research.html (last access: 6 October 2020), 2013. a
de Koster, P., Tielen, R., Wobbes, E., and Möller, M.: Extension of
B-spline Material Point Method for unstructured triangular grids using
Powell–Sabin splines, Comput. Part. Mechan., 1–16, https://doi.org/10.1007/s40571-020-00328-3, 2020. a
de Souza Neto, E. A., Peric, D., and Owen, D. R.: Computational methods for
plasticity: theory and applications, John Wiley & Sons, John Wiley & Sons Ltd, The Atrium, Southern Gate, Chichester, West Sussex, PO19 8SQ, United Kingdom, 2011. a
de Vaucorbeil, A., Nguyen, V., and Hutchinson, C.: A Total-Lagrangian
Material Point Method for solid mechanics problems involving large
deformations, Computer Methods in Applied Mechanics and Engineering, 360, https://doi.org/10.1016/j.cma.2019.112783, 2020. a
Dunatunga, S. and Kamrin, K.: Continuum modelling and simulation of granular
flows through their many phases, J. Fluid Mechan., 779, 483–513,
2015. a
Fern, J., Rohe, A., Soga, K., and Alonso, E.: The Material Point Method for Geotechnical Engineering. Boca Raton: CRC Press, https://doi.org/10.1201/9780429028090, 2019. a
Gan, Y., Sun, Z., Chen, Z., Zhang, X., and Liu, Y.: Enhancement of the material
point method using B-spline basis functions, Int. J.
Num. Method., 113, 411–431, 2018. a
Gaume, J., van Herwijnen, A., Gast, T., Teran, J., and Jiang, C.:
Investigating the release and flow of snow avalanches at the slope-scale
using a unified model based on the material point method, Cold Reg.
Sci. Technol., 168, 102847, https://doi.org/10.1016/j.coldregions.2019.102847, 2019. a
Gracia, F., Villard, P., and Richefeu, V.: Comparison of two numerical
approaches (DEM and MPM) applied to unsteady flow, Comput. Part.
Mechan., 6, 591–609, 2019. a
Homel, M. A., Brannon, R. M., and Guilkey, J.: Controlling the onset of
numerical fracture in parallelized implementations of the material point
method (MPM) with convective particle domain interpolation (CPDI) domain
scaling, Int. J. Num. Method., 107,
31–48, 2016. a
Iaconeta, I., Larese, A., Rossi, R., and Guo, Z.: Comparison of a material
point method and a galerkin meshfree method for the simulation of
cohesive-frictional materials, Materials, 10, 1150, 2017. a
Leavy, R., Guilkey, J., Phung, B., Spear, A., and Brannon, R.: A
convected-particle tetrahedron interpolation technique in the material-point
method for the mesoscale modeling of ceramics, Comput. Mechan., 64,
563–583, 2019. a
Moler, C.: MATLAB Incorporates LAPACK,
available at: https://ch.mathworks.com/de/company/newsletters/articles/matlab-incorporates-lapack.html?refresh=true (last access: 6 October 2020),
2000. a
Ni, R. and Zhang, X.: A precise critical time step formula for the explicit
material point method, Int. J. Num. Method., 121, 4989–5016, 2020. a
Steffen, M., Wallstedt, P., Guilkey, J., Kirby, R., and Berzins, M.:
Examination and analysis of implementation choices within the material point
method (MPM), Comput. Model. Eng. Sci., 31, 107–127,
2008b. a
Stomakhin, A., Schroeder, C., Chai, L., Teran, J., and Selle, A.: A material
point method for snow simulation, ACM Transactions on Graphics (TOG), 32,
1–10, 2013. a
Sulsky, D., Zhou, S.-J., and Schreyer, H. L.: Application of a particle-in-cell
method to solid mechanics, Comput. Phys. Commun., 87, 236–252,
1995. a
Vardon, P. J., Wang, B., and Hicks, M. A.: Slope failure simulations with MPM,
J. Hydrodynam., 29, 445–451, 2017. a
Vermeer, P. A. and De Borst, R.: Non-associated plasticity for soils, concrete
and rock, HERON, 29, 1984, 163–196, 1984. a
Wallstedt, P. C. and Guilkey, J.: An evaluation of explicit time integration
schemes for use with the generalized interpolation material point method,
J. Computat. Phys., 227, 9628–9642, 2008. a
Wang, B., Hicks, M., and Vardon, P.: Slope failure analysis using the random
material point method, Géotech. Lett. 6, 113–118,
2016a. a
Wang, B., Vardon, P., and Hicks, M.: Investigation of retrogressive and
progressive slope failure mechanisms using the material point method,
Comput. Geotech., 78, 88–98, 2016b. a
Wang, L., Coombs, W. M., Augarde, C., Cortis, E. M., Charlton, T. J., Brown, M. J., Knappett, J., Brennan, A., Davidson, C., Richards, and Blake, D. A.: On the use of
domain-based material point methods for problems involving large distortion,
Comput. Method. Appl. Mechan. Eng., 355, 1003–1025, 2019. a, b, c, d
Więckowski, Z.: The material point method in large strain engineering
problems, Comput. Method. Appl. Mechan. Eng., 193,
4417–4438, 2004. a
Wyser, E., Alkhimenkov, Y., Jayboyedoff, M., and Podladchikov, Y.:
fMPMM-solver, Zenodo, https://doi.org/10.5281/zenodo.4068585, 2020a. a
Wyser, E., Alkhimenkov, Y., Jayboyedoff, M., and Podladchikov, Y.:
fMPMM, available at: https://bitbucket.org/ewyser/fmpmm-solver/src/master/, last access: 6 October 2020. a
York, A. R., Sulsky, D., and Schreyer, H. L.: The material point method for
simulation of thin membranes, Int. J. Num. Method., 44, 1429–1456, 1999. a
Short summary
In this work, we present an efficient and fast material point method (MPM) implementation in MATLAB. We first discuss the vectorization strategies to adapt this numerical method to a MATLAB implementation. We report excellent agreement of the solver compared with classical analysis among the MPM community, such as the cantilever beam problem. The solver achieves a performance gain of 28 compared with a classical iterative implementation.
In this work, we present an efficient and fast material point method (MPM) implementation in...
