Articles | Volume 15, issue 17
https://doi.org/10.5194/gmd-15-6567-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-15-6567-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Development and technical paper
| 
01 Sep 2022
Development and technical paper |
| 01 Sep 2022
NeverWorld2: an idealized model hierarchy to investigate ocean mesoscale eddies across resolutions
Climate and Global Dynamics Laboratory, National Center for Atmospheric Research, Boulder, CO, USA
Nora Loose
Department of Applied Mathematics, University of Colorado, Boulder, CO, USA
Elizabeth Yankovsky
Courant Institute, New York University, New York, NY, USA
Jacob M. Steinberg
Woods Hole Oceanographic Institution, Woods Hole, MA, USA
Chiung-Yin Chang
Atmospheric and Oceanic Sciences, Princeton University, Princeton, NJ, USA
Neeraja Bhamidipati
Atmospheric and Oceanic Sciences, Princeton University, Princeton, NJ, USA
Alistair Adcroft
Atmospheric and Oceanic Sciences, Princeton University, Princeton, NJ, USA
Baylor Fox-Kemper
Department of Earth, Environmental, and Planetary Sciences, Brown University, Providence, RI, USA
Stephen M. Griffies
Atmospheric and Oceanic Sciences, Princeton University, Princeton, NJ, USA
NOAA Geophysical Fluid Dynamics Laboratory, Princeton, NJ, USA
Robert W. Hallberg
Atmospheric and Oceanic Sciences, Princeton University, Princeton, NJ, USA
NOAA Geophysical Fluid Dynamics Laboratory, Princeton, NJ, USA
Malte F. Jansen
Department of the Geophysical Sciences, The University of Chicago, Chicago, IL, USA
Hemant Khatri
Department of Earth, Ocean and Ecological Sciences, University of Liverpool, Liverpool, UK
Laure Zanna
Courant Institute, New York University, New York, NY, USA
Related authors
No articles found.
Neil Swart, Torge Martin, Rebecca Beadling, Jia-Jia Chen, Mathew H. England, Riccardo Farneti, Stephen M. Griffies, Tore Hatterman, F. Alexander Haumann, Qian Li, John Marshall, Morven Muilwijk, Andrew G. Pauling, Ariaan Purich, Inga J. Smith, and Max Thomas
EGUsphere, https://doi.org/10.5194/egusphere-2023-198, https://doi.org/10.5194/egusphere-2023-198, 2023
Short summary
Short summary
Current climate models typically do not include full representations icesheets. As the climate warms and the icesheets melt, they add freshwater to the ocean. This freshwater can influence climate change, for example by causing more sea-ice to form. In this paper we propose a set of experiments to test the influence of this missing meltwater from Antarctica, using multiple different climate models.
Anne Marie Treguier, Clement de Boyer Montégut, Alexandra Bozec, Eric P. Chassignet, Baylor Fox-Kemper, Andy McC. Hogg, Doroteacino Iovino, Andrew E. Kiss, Julien Le Sommer, Yiwen Li, Pengfei Lin, Camille Lique, Hailong Liu, Guillaume Serazin, Dmitry Sidorenko, Qiang Wang, Xiaobio Xu, and Steve Yeager
EGUsphere, https://doi.org/10.5194/egusphere-2023-310, https://doi.org/10.5194/egusphere-2023-310, 2023
Short summary
Short summary
The ocean mixed layer is the interface between the ocean interior and the atmosphere, and plays a key role in climate variability. We evaluate the performance of the new generation of ocean models for climate studies, designed to resolve "ocean eddies", which are the largest source of ocean variability and modulate the mixed layer properties. We find that the mixed layer depth is better represented in eddy-rich models, but unfortunately, not uniformly across the globe and not in all models.
Takaya Uchida, Julien Le Sommer, Charles Stern, Ryan P. Abernathey, Chris Holdgraf, Aurélie Albert, Laurent Brodeau, Eric P. Chassignet, Xiaobiao Xu, Jonathan Gula, Guillaume Roullet, Nikolay Koldunov, Sergey Danilov, Qiang Wang, Dimitris Menemenlis, Clément Bricaud, Brian K. Arbic, Jay F. Shriver, Fangli Qiao, Bin Xiao, Arne Biastoch, René Schubert, Baylor Fox-Kemper, William K. Dewar, and Alan Wallcraft
Geosci. Model Dev., 15, 5829–5856, https://doi.org/10.5194/gmd-15-5829-2022, https://doi.org/10.5194/gmd-15-5829-2022, 2022
Short summary
Short summary
Ocean and climate scientists have used numerical simulations as a tool to examine the ocean and climate system since the 1970s. Since then, owing to the continuous increase in computational power and advances in numerical methods, we have been able to simulate increasing complex phenomena. However, the fidelity of the simulations in representing the phenomena remains a core issue in the ocean science community. Here we propose a cloud-based framework to inter-compare and assess such simulations.
Trevor J. McDougall, Paul M. Barker, Ryan M. Holmes, Rich Pawlowicz, Stephen M. Griffies, and Paul J. Durack
Geosci. Model Dev., 14, 6445–6466, https://doi.org/10.5194/gmd-14-6445-2021, https://doi.org/10.5194/gmd-14-6445-2021, 2021
Short summary
Short summary
We show that the way that the air–sea heat flux is treated in ocean models means that the model's temperature variable should be interpreted as being Conservative Temperature, irrespective of whether the equation of state used in an ocean model is EOS-80 or TEOS-10.
Chia-Wei Hsu, Jianjun Yin, Stephen M. Griffies, and Raphael Dussin
Geosci. Model Dev., 14, 2471–2502, https://doi.org/10.5194/gmd-14-2471-2021, https://doi.org/10.5194/gmd-14-2471-2021, 2021
Short summary
Short summary
The new surface forcing from JRA55-do (OMIP II) significantly improved the underestimated sea level trend across the entire Pacific Ocean along 10° N in the simulation forced by CORE (OMIP I). We summarize and list out the reasons for the existing sea level biases across all studied timescales as a reference for improving the sea level simulation in the future. This study on the evaluation and improvement of ocean climate models should be of broad interest to a large modeling community.
Eric P. Chassignet, Stephen G. Yeager, Baylor Fox-Kemper, Alexandra Bozec, Frederic Castruccio, Gokhan Danabasoglu, Christopher Horvat, Who M. Kim, Nikolay Koldunov, Yiwen Li, Pengfei Lin, Hailong Liu, Dmitry V. Sein, Dmitry Sidorenko, Qiang Wang, and Xiaobiao Xu
Geosci. Model Dev., 13, 4595–4637, https://doi.org/10.5194/gmd-13-4595-2020, https://doi.org/10.5194/gmd-13-4595-2020, 2020
Short summary
Short summary
This paper presents global comparisons of fundamental global climate variables from a suite of four pairs of matched low- and high-resolution ocean and sea ice simulations to assess the robustness of climate-relevant improvements in ocean simulations associated with moving from coarse (∼1°) to eddy-resolving (∼0.1°) horizontal resolutions. Despite significant improvements, greatly enhanced horizontal resolution does not deliver unambiguous bias reduction in all regions for all models.
Hiroyuki Tsujino, L. Shogo Urakawa, Stephen M. Griffies, Gokhan Danabasoglu, Alistair J. Adcroft, Arthur E. Amaral, Thomas Arsouze, Mats Bentsen, Raffaele Bernardello, Claus W. Böning, Alexandra Bozec, Eric P. Chassignet, Sergey Danilov, Raphael Dussin, Eleftheria Exarchou, Pier Giuseppe Fogli, Baylor Fox-Kemper, Chuncheng Guo, Mehmet Ilicak, Doroteaciro Iovino, Who M. Kim, Nikolay Koldunov, Vladimir Lapin, Yiwen Li, Pengfei Lin, Keith Lindsay, Hailong Liu, Matthew C. Long, Yoshiki Komuro, Simon J. Marsland, Simona Masina, Aleksi Nummelin, Jan Klaus Rieck, Yohan Ruprich-Robert, Markus Scheinert, Valentina Sicardi, Dmitry Sidorenko, Tatsuo Suzuki, Hiroaki Tatebe, Qiang Wang, Stephen G. Yeager, and Zipeng Yu
Geosci. Model Dev., 13, 3643–3708, https://doi.org/10.5194/gmd-13-3643-2020, https://doi.org/10.5194/gmd-13-3643-2020, 2020
Short summary
Short summary
The OMIP-2 framework for global ocean–sea-ice model simulations is assessed by comparing multi-model means from 11 CMIP6-class global ocean–sea-ice models calculated separately for the OMIP-1 and OMIP-2 simulations. Many features are very similar between OMIP-1 and OMIP-2 simulations, and yet key improvements in transitioning from OMIP-1 to OMIP-2 are also identified. Thus, the present assessment justifies that future ocean–sea-ice model development and analysis studies use the OMIP-2 framework.
Valentin Resseguier, Wei Pan, and Baylor Fox-Kemper
Nonlin. Processes Geophys., 27, 209–234, https://doi.org/10.5194/npg-27-209-2020, https://doi.org/10.5194/npg-27-209-2020, 2020
Short summary
Short summary
Geophysical flows span a broader range of temporal and spatial scales than can be resolved numerically. One way to alleviate the ensuing numerical errors is to combine simulations with measurements, taking account of the accuracies of these two sources of information. Here we quantify the distribution of numerical simulation errors without relying on high-resolution numerical simulations. Specifically, small-scale random vortices are added to simulations while conserving energy or circulation.
Andrew E. Kiss, Andrew McC. Hogg, Nicholas Hannah, Fabio Boeira Dias, Gary B. Brassington, Matthew A. Chamberlain, Christopher Chapman, Peter Dobrohotoff, Catia M. Domingues, Earl R. Duran, Matthew H. England, Russell Fiedler, Stephen M. Griffies, Aidan Heerdegen, Petra Heil, Ryan M. Holmes, Andreas Klocker, Simon J. Marsland, Adele K. Morrison, James Munroe, Maxim Nikurashin, Peter R. Oke, Gabriela S. Pilo, Océane Richet, Abhishek Savita, Paul Spence, Kial D. Stewart, Marshall L. Ward, Fanghua Wu, and Xihan Zhang
Geosci. Model Dev., 13, 401–442, https://doi.org/10.5194/gmd-13-401-2020, https://doi.org/10.5194/gmd-13-401-2020, 2020
Short summary
Short summary
We describe new computer model configurations which simulate the global ocean and sea ice at three resolutions. The coarsest resolution is suitable for multi-century climate projection experiments, whereas the finest resolution is designed for more detailed studies over time spans of decades. The paper provides technical details of the model configurations and an assessment of their performance relative to observations.
Anson Cheung, Baylor Fox-Kemper, and Timothy Herbert
Clim. Past, 15, 1985–1998, https://doi.org/10.5194/cp-15-1985-2019, https://doi.org/10.5194/cp-15-1985-2019, 2019
Short summary
Short summary
We test two assumptions that are often made in paleoclimate studies by using observations and ask whether temperature and productivity proxy records in the Southern California Current can be used to reconstruct Ekman upwelling. By examining the covariation between alongshore wind stress, temperature, and productivity, we found that the dominant covarying pattern does not reflect Ekman upwelling. Other upwelling patterns found are timescale dependent. Multiple proxies can improve reconstruction.
Christopher Horvat, Lettie A. Roach, Rachel Tilling, Cecilia M. Bitz, Baylor Fox-Kemper, Colin Guider, Kaitlin Hill, Andy Ridout, and Andrew Shepherd
The Cryosphere, 13, 2869–2885, https://doi.org/10.5194/tc-13-2869-2019, https://doi.org/10.5194/tc-13-2869-2019, 2019
Short summary
Short summary
Changes in the floe size distribution (FSD) are important for sea ice evolution but to date largely unobserved and unknown. Climate models, forecast centres, ship captains, and logistic specialists cannot currently obtain statistical information about sea ice floe size on demand. We develop a new method to observe the FSD at global scales and high temporal and spatial resolution. With refinement, this method can provide crucial information for polar ship routing and real-time forecasting.
Seonmin Ahn, Baylor Fox-Kemper, Timothy Herbert, and Charles Lawrence
Clim. Past Discuss., https://doi.org/10.5194/cp-2018-1, https://doi.org/10.5194/cp-2018-1, 2018
Revised manuscript not accepted
James C. Orr, Raymond G. Najjar, Olivier Aumont, Laurent Bopp, John L. Bullister, Gokhan Danabasoglu, Scott C. Doney, John P. Dunne, Jean-Claude Dutay, Heather Graven, Stephen M. Griffies, Jasmin G. John, Fortunat Joos, Ingeborg Levin, Keith Lindsay, Richard J. Matear, Galen A. McKinley, Anne Mouchet, Andreas Oschlies, Anastasia Romanou, Reiner Schlitzer, Alessandro Tagliabue, Toste Tanhua, and Andrew Yool
Geosci. Model Dev., 10, 2169–2199, https://doi.org/10.5194/gmd-10-2169-2017, https://doi.org/10.5194/gmd-10-2169-2017, 2017
Short summary
Short summary
The Ocean Model Intercomparison Project (OMIP) is a model comparison effort under Phase 6 of the Coupled Model Intercomparison Project (CMIP6). Its physical component is described elsewhere in this special issue. Here we describe its ocean biogeochemical component (OMIP-BGC), detailing simulation protocols and analysis diagnostics. Simulations focus on ocean carbon, other biogeochemical tracers, air-sea exchange of CO2 and related gases, and chemical tracers used to evaluate modeled circulation.
Arin D. Nelson, Jeffrey B. Weiss, Baylor Fox-Kemper, Royce K. P. Zia, and Fabienne Gaillard
Ocean Sci. Discuss., https://doi.org/10.5194/os-2016-105, https://doi.org/10.5194/os-2016-105, 2017
Revised manuscript has not been submitted
Short summary
Short summary
We quantify the skill in observing the variability of global upper ocean heat content (OHC) by applying the ISAS13 observing strategy to a CCSM simulation. We find that variability is unreliably observed before 2005, while observed annual running means for 2005–2013 correlate well with model "truth" to a median of 95 %. When scaled to the real ocean, we find signal-to-noise ratios of 1.9 for pre-Argo times (1990–2005) and 14.7 after Argo is introduced (2005–2013). The global warming is robust.
Jonathan M. Gregory, Nathaelle Bouttes, Stephen M. Griffies, Helmuth Haak, William J. Hurlin, Johann Jungclaus, Maxwell Kelley, Warren G. Lee, John Marshall, Anastasia Romanou, Oleg A. Saenko, Detlef Stammer, and Michael Winton
Geosci. Model Dev., 9, 3993–4017, https://doi.org/10.5194/gmd-9-3993-2016, https://doi.org/10.5194/gmd-9-3993-2016, 2016
Short summary
Short summary
As a consequence of greenhouse gas emissions, changes in ocean temperature, salinity, circulation and sea level are expected in coming decades. Among the models used for climate projections for the 21st century, there is a large spread in projections of these effects. The Flux-Anomaly-Forced Model Intercomparison Project (FAFMIP) aims to investigate and explain this spread by prescribing a common set of changes in the input of heat, water and wind stress to the ocean in the participating models.
Stephen M. Griffies, Gokhan Danabasoglu, Paul J. Durack, Alistair J. Adcroft, V. Balaji, Claus W. Böning, Eric P. Chassignet, Enrique Curchitser, Julie Deshayes, Helge Drange, Baylor Fox-Kemper, Peter J. Gleckler, Jonathan M. Gregory, Helmuth Haak, Robert W. Hallberg, Patrick Heimbach, Helene T. Hewitt, David M. Holland, Tatiana Ilyina, Johann H. Jungclaus, Yoshiki Komuro, John P. Krasting, William G. Large, Simon J. Marsland, Simona Masina, Trevor J. McDougall, A. J. George Nurser, James C. Orr, Anna Pirani, Fangli Qiao, Ronald J. Stouffer, Karl E. Taylor, Anne Marie Treguier, Hiroyuki Tsujino, Petteri Uotila, Maria Valdivieso, Qiang Wang, Michael Winton, and Stephen G. Yeager
Geosci. Model Dev., 9, 3231–3296, https://doi.org/10.5194/gmd-9-3231-2016, https://doi.org/10.5194/gmd-9-3231-2016, 2016
Short summary
Short summary
The Ocean Model Intercomparison Project (OMIP) aims to provide a framework for evaluating, understanding, and improving the ocean and sea-ice components of global climate and earth system models contributing to the Coupled Model Intercomparison Project Phase 6 (CMIP6). This document defines OMIP and details a protocol both for simulating global ocean/sea-ice models and for analysing their output.
Related subject area
Oceanography
Reproducible and relocatable regional ocean modelling: fundamentals and practices
Barotropic tides in MPAS-Ocean (E3SM V2): impact of ice shelf cavities
Using the two-way nesting technique AGRIF with MARS3D V11.2 to improve hydrodynamics and estimate environmental indicators
Multidecadal and climatological surface current simulations for the southwestern Indian Ocean at 1∕50° resolution
The tidal effects in the Finite-volumE Sea ice–Ocean Model (FESOM2.1): a comparison between parameterised tidal mixing and explicit tidal forcing
HIDRA2: deep-learning ensemble sea level and storm tide forecasting in the presence of seiches – the case of the northern Adriatic
Moana Ocean Hindcast – a > 25-year simulation for New Zealand waters using the Regional Ocean Modeling System (ROMS) v3.9 model
A nonhydrostatic oceanic regional model, ORCTM v1, for internal solitary wave simulation
How does 4DVar data assimilation affect the vertical representation of mesoscale eddies? A case study with observing system simulation experiments (OSSEs) using ROMS v3.9
An ensemble Kalman filter-based ocean data assimilation system improved by adaptive observation error inflation (AOEI)
GULF18, a high-resolution NEMO-based tidal ocean model of the Arabian/Persian Gulf
The Baltic Sea Model Intercomparison Project (BMIP) – a platform for model development, evaluation, and uncertainty assessment
An ensemble Kalman filter system with the Stony Brook Parallel Ocean Model v1.0
4DVarNet-SSH: end-to-end learning of variational interpolation schemes for nadir and wide-swath satellite altimetry
Wind work at the air-sea interface: a modeling study in anticipation of future space missions
Development and validation of a global 1/32° surface wave-tide-circulation coupled ocean model: FIO-COM32
The 3D biogeochemical marine mercury cycling model MERCY v2.0 – linking atmospheric Hg to methyl mercury in fish
Improved upper-ocean thermodynamical structure modeling with combined effects of surface waves and M2 internal tides on vertical mixing: a case study for the Indian Ocean
The bulk parameterizations of turbulent air–sea fluxes in NEMO4: the origin of sea surface temperature differences in a global model study
Observing system simulation experiments reveal that subsurface temperature observations improve estimates of circulation and heat content in a dynamic western boundary current
Parallel implementation of the SHYFEM (System of HydrodYnamic Finite Element Modules) model
Block-structured, equal-workload, multi-grid-nesting interface for the Boussinesq wave model FUNWAVE-TVD (Total Variation Diminishing)
Evaluation of an emergent feature of sub-shelf melt oscillations from an idealized coupled ice sheet–ocean model using FISOC (v1.1) – ROMSIceShelf (v1.0) – Elmer/Ice (v9.0)
GNOM v1.0: an optimized steady-state model of the modern marine neodymium cycle
Implementation and evaluation of open boundary conditions for sea ice in a regional coupled ocean (ROMS) and sea ice (CICE) modeling system
ROMSPath v1.0: offline particle tracking for the Regional Ocean Modeling System (ROMS)
DINCAE 2.0: multivariate convolutional neural network with error estimates to reconstruct sea surface temperature satellite and altimetry observations
RADIv1: a non-steady-state early diagenetic model for ocean sediments in Julia and MATLAB/GNU Octave
IBI-CCS: a regional high-resolution model to simulate sea level in western Europe
Empirical Lagrangian parametrization for wind-driven mixing of buoyant particles at the ocean surface
Improving ocean modeling software NEMO 4.0 benchmarking and communication efficiency
Improvements in the regional South China Sea Operational Oceanography Forecasting System (SCSOFSv2)
Reconsideration of wind stress, wind waves, and turbulence in simulating wind-driven currents of shallow lakes in the Wave and Current Coupled Model (WCCM) version 1.0
ISWFoam: a numerical model for internal solitary wave simulation in continuously stratified fluids
PyCO2SYS v1.8: marine carbonate system calculations in Python
Plume spreading test case for coastal ocean models
The interpretation of temperature and salinity variables in numerical ocean model output and the calculation of heat fluxes and heat content
S2P3-R v2.0: computationally efficient modelling of shelf seas on regional to global scales
The Lagrangian-based Floating Macroalgal Growth and Drift Model (FMGDM v1.0): application to the Yellow Sea green tide
Nemo-Nordic 2.0: operational marine forecast model for the Baltic Sea
Australian tidal currents – assessment of a barotropic model (COMPAS v1.3.0 rev6631) with an unstructured grid
Sedapp v2021: a nonlinear diffusion-based forward stratigraphic model for shallow marine environments
A discrete interaction numerical model for coagulation and fragmentation of marine detritic particulate matter (Coagfrag v.1)
Parallel computing efficiency of SWAN 40.91
Integrating CVMix into GOTM (v6.0): a consistent framework for testing, comparing, and applying ocean mixing schemes
A NEMO-based model of Sargassum distribution in the tropical Atlantic: description of the model and sensitivity analysis (NEMO-Sarg1.0)
Evaluating the physical and biogeochemical state of the global ocean component of UKESM1 in CMIP6 historical simulations
Iron and sulfur cycling in the cGENIE.muffin Earth system model (v0.9.21)
BFM17 v1.0: a reduced biogeochemical flux model for upper-ocean biophysical simulations
A mechanistic analysis of tropical Pacific dynamic sea level in GFDL-OM4 under OMIP-I and OMIP-II forcings
Jeff Polton, James Harle, Jason Holt, Anna Katavouta, Dale Partridge, Jenny Jardine, Sarah Wakelin, Julia Rulent, Anthony Wise, Katherine Hutchinson, David Byrne, Diego Bruciaferri, Enda O'Dea, Michela De Dominicis, Pierre Mathiot, Andrew Coward, Andrew Yool, Julien Palmiéri, Gennadi Lessin, Claudia Gabriela Mayorga-Adame, Valérie Le Guennec, Alex Arnold, and Clément Rousset
Geosci. Model Dev., 16, 1481–1510, https://doi.org/10.5194/gmd-16-1481-2023, https://doi.org/10.5194/gmd-16-1481-2023, 2023
Short summary
Short summary
The aim is to increase the capacity of the modelling community to respond to societally important questions that require ocean modelling. The concept of reproducibility for regional ocean modelling is developed: advocating methods for reproducible workflows and standardised methods of assessment. Then, targeting the NEMO framework, we give practical advice and worked examples, highlighting key considerations that will the expedite development cycle and upskill the user community.
Nairita Pal, Kristin N. Barton, Mark R. Petersen, Steven R. Brus, Darren Engwirda, Brian K. Arbic, Andrew F. Roberts, Joannes J. Westerink, and Damrongsak Wirasaet
Geosci. Model Dev., 16, 1297–1314, https://doi.org/10.5194/gmd-16-1297-2023, https://doi.org/10.5194/gmd-16-1297-2023, 2023
Short summary
Short summary
Understanding tides is essential to accurately predict ocean currents. Over the next several decades coastal processes such as flooding and erosion will be severely impacted due to climate change. Tides affect currents along the coastal regions the most. In this paper we show the results of implementing tides in a global ocean model known as MPAS–Ocean. We also show how Antarctic ice shelf cavities affect global tides. Our work points towards future research with tide–ice interactions.
Sébastien Petton, Valérie Garnier, Matthieu Caillaud, Laurent Debreu, and Franck Dumas
Geosci. Model Dev., 16, 1191–1211, https://doi.org/10.5194/gmd-16-1191-2023, https://doi.org/10.5194/gmd-16-1191-2023, 2023
Short summary
Short summary
The nesting AGRIF library is implemented in the MARS3D hydrodynamic model, a semi-implicit, free-surface numerical model which uses a time scheme as an alternating-direction implicit (ADI) algorithm. Two applications at the regional and coastal scale are introduced. We compare the two-nesting approach to the classic offline one-way approach, based on an in situ dataset. This method is an efficient means to significantly improve the physical hydrodynamics and unravel ecological challenges.
Noam S. Vogt-Vincent and Helen L. Johnson
Geosci. Model Dev., 16, 1163–1178, https://doi.org/10.5194/gmd-16-1163-2023, https://doi.org/10.5194/gmd-16-1163-2023, 2023
Short summary
Short summary
Ocean currents transport things over large distances across the ocean surface. Predicting this transport is key for tackling many environmental problems, such as marine plastic pollution and coral reef resilience. However, doing this requires a good understanding ocean currents, which is currently lacking. Here, we present and validate state-of-the-art simulations for surface currents in the southwestern Indian Ocean, which will support future marine dispersal studies across this region.
Pengyang Song, Dmitry Sidorenko, Patrick Scholz, Maik Thomas, and Gerrit Lohmann
Geosci. Model Dev., 16, 383–405, https://doi.org/10.5194/gmd-16-383-2023, https://doi.org/10.5194/gmd-16-383-2023, 2023
Short summary
Short summary
Tides have essential effects on the ocean and climate. Most previous research applies parameterised tidal mixing to discuss their effects in models. By comparing the effect of a tidal mixing parameterisation and tidal forcing on the ocean state, we assess the advantages and disadvantages of the two methods. Our results show that tidal mixing in the North Pacific Ocean strongly affects the global thermohaline circulation. We also list some effects that are not considered in the parameterisation.
Marko Rus, Anja Fettich, Matej Kristan, and Matjaž Ličer
Geosci. Model Dev., 16, 271–288, https://doi.org/10.5194/gmd-16-271-2023, https://doi.org/10.5194/gmd-16-271-2023, 2023
Short summary
Short summary
We propose a new fast and reliable deep-learning architecture HIDRA2 for sea level and storm surge modeling. HIDRA2 features new feature encoders and a fusion-regression block. We test HIDRA2 on Adriatic storm surges, which depend on an interaction between tides and seiches. We demonstrate that HIDRA2 learns to effectively mimic the timing and amplitude of Adriatic seiches. This is essential for reliable HIDRA2 predictions of total storm surge sea levels.
Joao Marcos Azevedo Correia de Souza, Sutara H. Suanda, Phellipe P. Couto, Robert O. Smith, Colette Kerry, and Moninya Roughan
Geosci. Model Dev., 16, 211–231, https://doi.org/10.5194/gmd-16-211-2023, https://doi.org/10.5194/gmd-16-211-2023, 2023
Short summary
Short summary
The current paper describes the configuration and evaluation of the Moana Ocean Hindcast, a > 25-year simulation of the ocean state around New Zealand using the Regional Ocean Modeling System v3.9. This is the first open-access, long-term, continuous, realistic ocean simulation for this region and provides information for improving the understanding of the ocean processes that affect the New Zealand exclusive economic zone.
Hao Huang, Pengyang Song, Shi Qiu, Jiaqi Guo, and Xueen Chen
Geosci. Model Dev., 16, 109–133, https://doi.org/10.5194/gmd-16-109-2023, https://doi.org/10.5194/gmd-16-109-2023, 2023
Short summary
Short summary
The Oceanic Regional Circulation and Tide Model (ORCTM) is developed to reproduce internal solitary wave dynamics. The three-dimensional nonlinear momentum equations are involved with the nonhydrostatic pressure obtained via solving the Poisson equation. The validation experimental results agree with the internal wave theories and observations, demonstrating that the ORCTM can successfully describe the life cycle of nonlinear internal solitary waves under different oceanic environments.
David E. Gwyther, Shane R. Keating, Colette Kerry, and Moninya Roughan
Geosci. Model Dev., 16, 157–178, https://doi.org/10.5194/gmd-16-157-2023, https://doi.org/10.5194/gmd-16-157-2023, 2023
Short summary
Short summary
Ocean eddies are important for weather, climate, biology, navigation, and search and rescue. Since eddies change rapidly, models that incorporate or assimilate observations are required to produce accurate eddy timings and locations, yet the model accuracy is rarely assessed below the surface. We use a unique type of ocean model experiment to assess three-dimensional eddy structure in the East Australian Current and explore two pathways in which this subsurface structure is being degraded.
Shun Ohishi, Takemasa Miyoshi, and Misako Kachi
Geosci. Model Dev., 15, 9057–9073, https://doi.org/10.5194/gmd-15-9057-2022, https://doi.org/10.5194/gmd-15-9057-2022, 2022
Short summary
Short summary
An adaptive observation error inflation (AOEI) method was proposed for atmospheric data assimilation to mitigate erroneous analysis updates caused by large observation-minus-forecast differences for satellite brightness temperature around clear- and cloudy-sky boundaries. This study implemented the AOEI with an ocean data assimilation system, leading to an improvement of analysis accuracy and dynamical balance around the frontal regions with large meridional temperature differences.
Diego Bruciaferri, Marina Tonani, Isabella Ascione, Fahad Al Senafi, Enda O'Dea, Helene T. Hewitt, and Andrew Saulter
Geosci. Model Dev., 15, 8705–8730, https://doi.org/10.5194/gmd-15-8705-2022, https://doi.org/10.5194/gmd-15-8705-2022, 2022
Short summary
Short summary
More accurate predictions of the Gulf's ocean dynamics are needed. We investigate the impact on the predictive skills of a numerical shelf sea model of the Gulf after changing a few key aspects. Increasing the lateral and vertical resolution and optimising the vertical coordinate system to best represent the leading physical processes at stake significantly improve the accuracy of the simulated dynamics. Additional work may be needed to get real benefit from using a more realistic bathymetry.
Matthias Gröger, Manja Placke, H. E. Markus Meier, Florian Börgel, Sandra-Esther Brunnabend, Cyril Dutheil, Ulf Gräwe, Magnus Hieronymus, Thomas Neumann, Hagen Radtke, Semjon Schimanke, Jian Su, and Germo Väli
Geosci. Model Dev., 15, 8613–8638, https://doi.org/10.5194/gmd-15-8613-2022, https://doi.org/10.5194/gmd-15-8613-2022, 2022
Short summary
Short summary
Comparisons of oceanographic climate data from different models often suffer from different model setups, forcing fields, and output of variables. This paper provides a protocol to harmonize these elements to set up multidecadal simulations for the Baltic Sea, a marginal sea in Europe. First results are shown from six different model simulations from four different model platforms. Topical studies for upwelling, marine heat waves, and stratification are also assessed.
Shun Ohishi, Tsutomu Hihara, Hidenori Aiki, Joji Ishizaka, Yasumasa Miyazawa, Misako Kachi, and Takemasa Miyoshi
Geosci. Model Dev., 15, 8395–8410, https://doi.org/10.5194/gmd-15-8395-2022, https://doi.org/10.5194/gmd-15-8395-2022, 2022
Short summary
Short summary
We develop an ensemble-Kalman-filter-based regional ocean data assimilation system in which satellite and in situ observations are assimilated at a daily frequency. We find the best setting for dynamical balance and accuracy based on sensitivity experiments focused on how to inflate the ensemble spread and how to apply the analysis update to the model evolution. This study has a broader impact on more general data assimilation systems in which the initial shocks are a significant issue.
Maxime Beauchamp, Quentin Febvre, Hugo Georgenthum, and Ronan Fablet
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2022-241, https://doi.org/10.5194/gmd-2022-241, 2022
Revised manuscript accepted for GMD
Short summary
Short summary
4DVarNet is a learning-based method backboned on traditional data assimilation (DA). This new class of algorithms can be used to provide efficient reconstructions of a dynamical system based on single observations. We provide a 4DVarNet application to SSH reconstructions based on nadir and future SWOT data: it turns out to outperform other state-of-the-art methods, from optimal interpolation to sophisticated DA algorithms. This research is led within the AI Chair Oceanix on-going works.
Hector S. Torres, Patrice Klein, Jinbo Wang, Alexander Wineteer, Bo Qiu, Andrew F. Thompson, Lionel Renault, Ernesto Rodriguez, Dimitris Menemenlis, Andrea Molod, Christopher N. Hill, Ehud Strobach, Hong Zhang, Mar Flexas, and Dragana Perkovic-Martin
Geosci. Model Dev., 15, 8041–8058, https://doi.org/10.5194/gmd-15-8041-2022, https://doi.org/10.5194/gmd-15-8041-2022, 2022
Short summary
Short summary
Wind work at the air-sea interface is the scalar product of winds and currents and is the transfer of kinetic energy between the ocean and the atmosphere. Using a new global coupled ocean-atmosphere simulation performed at kilometer resolution, we show that all scales of winds and currents impact the ocean dynamics at spatial and temporal scales. The consequential interplay of surface winds and currents in the numerical simulation motivates the need for a winds and currents satellite mission.
Bin Xiao, Fangli Qiao, Qi Shu, Xunqiang Yin, Guansuo Wang, and Shihong Wang
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2022-254, https://doi.org/10.5194/gmd-2022-254, 2022
Revised manuscript accepted for GMD
Short summary
Short summary
A new global surface wave-tide-circulation coupled ocean model FIO-COM32 with resolution of 1/32° × 1/32° is developed and validated. Both the promotion of the horizontal resolution and included physical processes are proved to be important contributors to the significant improvements of FIO-COM32 simulations. It should be the time to merge these separated model components (surface wave, tidal current and ocean circulation) for new generation ocean model development.
Johannes Bieser, David Amptmeijer, Ute Daewel, Joachim Kuss, Anne L. Soerensen, and Corinna Schrum
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2021-427, https://doi.org/10.5194/gmd-2021-427, 2022
Revised manuscript accepted for GMD
Short summary
Short summary
We developed a 3d model for mercury (Hg) cycling and bioaccumulation in the ocean. Hg is a major global pollutant regulated under the UN Minamata Convention. Anthropogenic Hg emission are transported globally and eventually reach the worlds Oceans. There, Hg is transformed into an even more toxic and bioaccumulative pollutant: Methylmercury (MeHg). The MERCY model is able to predict the fate of Hg in the ocean, the formation of MeHg, and its accumulation in the food web.
Zhanpeng Zhuang, Quanan Zheng, Yongzeng Yang, Zhenya Song, Yeli Yuan, Chaojie Zhou, Xinhua Zhao, Ting Zhang, and Jing Xie
Geosci. Model Dev., 15, 7221–7241, https://doi.org/10.5194/gmd-15-7221-2022, https://doi.org/10.5194/gmd-15-7221-2022, 2022
Short summary
Short summary
We evaluate the impacts of surface waves and internal tides on the upper-ocean mixing in the Indian Ocean. The surface-wave-generated turbulent mixing is dominant if depth is < 30 m, while the internal-tide-induced mixing is larger than surface waves in the ocean interior from 40
to 130 m. The simulated thermal structure, mixed layer depth and surface current are all improved when the mixing schemes are jointly incorporated into the ocean model because of the strengthened vertical mixing.
Giulia Bonino, Doroteaciro Iovino, Laurent Brodeau, and Simona Masina
Geosci. Model Dev., 15, 6873–6889, https://doi.org/10.5194/gmd-15-6873-2022, https://doi.org/10.5194/gmd-15-6873-2022, 2022
Short summary
Short summary
The sea surface temperature (SST) is highly influenced by the transfer of energy driven by turbulent air–sea fluxes (TASFs). In the NEMO ocean general circulation model, TASFs are computed by means of bulk formulas. Bulk formulas require the choice of a given bulk parameterization, which influences the magnitudes of the TASFs. Our results show that parameterization-related SST differences are primarily sensitive to the wind stress differences across parameterizations.
David E. Gwyther, Colette Kerry, Moninya Roughan, and Shane R. Keating
Geosci. Model Dev., 15, 6541–6565, https://doi.org/10.5194/gmd-15-6541-2022, https://doi.org/10.5194/gmd-15-6541-2022, 2022
Short summary
Short summary
The ocean current flowing along the southeastern coast of Australia is called the East Australian Current (EAC). Using computer simulations, we tested how surface and subsurface observations might improve models of the EAC. Subsurface observations are particularly important for improving simulations, and if made in the correct location and time, can have impact 600 km upstream. The stability of the current affects model estimates could be capitalized upon in future observing strategies.
Giorgio Micaletto, Ivano Barletta, Silvia Mocavero, Ivan Federico, Italo Epicoco, Giorgia Verri, Giovanni Coppini, Pasquale Schiano, Giovanni Aloisio, and Nadia Pinardi
Geosci. Model Dev., 15, 6025–6046, https://doi.org/10.5194/gmd-15-6025-2022, https://doi.org/10.5194/gmd-15-6025-2022, 2022
Short summary
Short summary
The full exploitation of supercomputing architectures requires a deep revision of the current climate models. This paper presents the parallelization of the three-dimensional hydrodynamic model SHYFEM (System of HydrodYnamic Finite Element Modules). Optimized numerical libraries were used to partition the model domain and solve the sparse linear system of equations in parallel. The performance assessment demonstrates a good level of scalability with a realistic configuration used as a benchmark.
Young-Kwang Choi, Fengyan Shi, Matt Malej, Jane M. Smith, James T. Kirby, and Stephan T. Grilli
Geosci. Model Dev., 15, 5441–5459, https://doi.org/10.5194/gmd-15-5441-2022, https://doi.org/10.5194/gmd-15-5441-2022, 2022
Short summary
Short summary
The multi-grid-nesting technique is an important methodology used for modeling transoceanic tsunamis and coastal effects. In this study, we developed a two-way nesting interface in a multi-grid-nesting system for the Boussinesq wave model FUNWAVE-TVD. The interface acts as a
backboneof the nesting framework, handling data input, output, time sequencing, and internal interactions between grids at different scales.
Chen Zhao, Rupert Gladstone, Benjamin Keith Galton-Fenzi, David Gwyther, and Tore Hattermann
Geosci. Model Dev., 15, 5421–5439, https://doi.org/10.5194/gmd-15-5421-2022, https://doi.org/10.5194/gmd-15-5421-2022, 2022
Short summary
Short summary
We use a coupled ice–ocean model to explore an oscillation feature found in several contributing models to MISOMIP1. The oscillation is closely related to the discretized grounding line retreat and likely strengthened by the buoyancy–melt feedback and/or melt–geometry feedback near the grounding line, and frequent ice–ocean coupling. Our model choices have a non-trivial impact on mean melt and ocean circulation strength, which might be interesting for the coupled ice–ocean community.
Benoît Pasquier, Sophia K. V. Hines, Hengdi Liang, Yingzhe Wu, Steven L. Goldstein, and Seth G. John
Geosci. Model Dev., 15, 4625–4656, https://doi.org/10.5194/gmd-15-4625-2022, https://doi.org/10.5194/gmd-15-4625-2022, 2022
Short summary
Short summary
Neodymium isotopes in seawater have the potential to provide key information about ocean circulation, both today and in the past. This can shed light on the underlying drivers of global climate, which will improve our ability to predict future climate change, but uncertainties in our understanding of neodymium cycling have limited use of this tracer. We present a new model of neodymium in the modern ocean that runs extremely fast, matches observations, and is freely available for development.
Pedro Duarte, Jostein Brændshøi, Dmitry Shcherbin, Pauline Barras, Jon Albretsen, Yvonne Gusdal, Nicholas Szapiro, Andreas Martinsen, Annette Samuelsen, Keguang Wang, and Jens Boldingh Debernard
Geosci. Model Dev., 15, 4373–4392, https://doi.org/10.5194/gmd-15-4373-2022, https://doi.org/10.5194/gmd-15-4373-2022, 2022
Short summary
Short summary
Sea ice models are often implemented for very large domains beyond the regions of sea ice formation, such as the whole Arctic or all of Antarctica. In this study, we implement changes in the Los Alamos Sea Ice Model, allowing it to be implemented for relatively small regions within the Arctic or Antarctica and yet considering the presence and influence of sea ice outside the represented areas. Such regional implementations are important when spatially detailed results are required.
Elias J. Hunter, Heidi L. Fuchs, John L. Wilkin, Gregory P. Gerbi, Robert J. Chant, and Jessica C. Garwood
Geosci. Model Dev., 15, 4297–4311, https://doi.org/10.5194/gmd-15-4297-2022, https://doi.org/10.5194/gmd-15-4297-2022, 2022
Short summary
Short summary
ROMSPath is an offline particle tracking model tailored for use with output from Regional Ocean Modeling System (ROMS) simulations. It is an update to an established system, the Lagrangian TRANSport (LTRANS) model, including a number of improvements. These include a modification of the model coordinate system which improved accuracy and numerical efficiency, and added functionality for nested grids and Stokes drift.
Alexander Barth, Aida Alvera-Azcárate, Charles Troupin, and Jean-Marie Beckers
Geosci. Model Dev., 15, 2183–2196, https://doi.org/10.5194/gmd-15-2183-2022, https://doi.org/10.5194/gmd-15-2183-2022, 2022
Short summary
Short summary
Earth-observing satellites provide routine measurement of several ocean parameters. However, these datasets have a significant amount of missing data due to the presence of clouds or other limitations of the employed sensors. This paper describes a method to infer the value of the missing satellite data based on a convolutional autoencoder (a specific type of neural network architecture). The technique also provides a reliable error estimate of the interpolated value.
Olivier Sulpis, Matthew P. Humphreys, Monica M. Wilhelmus, Dustin Carroll, William M. Berelson, Dimitris Menemenlis, Jack J. Middelburg, and Jess F. Adkins
Geosci. Model Dev., 15, 2105–2131, https://doi.org/10.5194/gmd-15-2105-2022, https://doi.org/10.5194/gmd-15-2105-2022, 2022
Short summary
Short summary
A quarter of the surface of the Earth is covered by marine sediments rich in calcium carbonates, and their dissolution acts as a giant antacid tablet protecting the ocean against human-made acidification caused by massive CO2 emissions. Here, we present a new model of sediment chemistry that incorporates the latest experimental findings on calcium carbonate dissolution kinetics. This model can be used to predict how marine sediments evolve through time in response to environmental perturbations.
Alisée A. Chaigneau, Guillaume Reffray, Aurore Voldoire, and Angélique Melet
Geosci. Model Dev., 15, 2035–2062, https://doi.org/10.5194/gmd-15-2035-2022, https://doi.org/10.5194/gmd-15-2035-2022, 2022
Short summary
Short summary
Climate-change-induced sea level rise is a major threat for coastal and low-lying regions. Projections of coastal sea level changes are thus of great interest for coastal risk assessment and have significantly developed in recent years. In this paper, the objective is to provide high-resolution (6 km) projections of sea level changes in the northeastern Atlantic region bordering western Europe. For that purpose, a regional model is used to refine existing coarse global projections.
Victor Onink, Erik van Sebille, and Charlotte Laufkötter
Geosci. Model Dev., 15, 1995–2012, https://doi.org/10.5194/gmd-15-1995-2022, https://doi.org/10.5194/gmd-15-1995-2022, 2022
Short summary
Short summary
Turbulent mixing is a vital process in 3D modeling of particle transport in the ocean. However, since turbulence occurs on very short spatial scales and timescales, large-scale ocean models generally have highly simplified turbulence representations. We have developed parametrizations for the vertical turbulent transport of buoyant particles that can be easily applied in a large-scale particle tracking model. The predicted vertical concentration profiles match microplastic observations well.
Gaston Irrmann, Sébastien Masson, Éric Maisonnave, David Guibert, and Erwan Raffin
Geosci. Model Dev., 15, 1567–1582, https://doi.org/10.5194/gmd-15-1567-2022, https://doi.org/10.5194/gmd-15-1567-2022, 2022
Short summary
Short summary
To be efficient on supercomputers, software must be high-performance at computing many concurrent tasks. Communications between tasks is often necessary but time consuming, and ocean modelling software NEMO 4.0 is no exception.
In this work we describe approaches enabling fewer communications, an optimization to share the workload more equally between tasks and a new flexible configuration to assess NEMO's performance easily.
Xueming Zhu, Ziqing Zu, Shihe Ren, Miaoyin Zhang, Yunfei Zhang, Hui Wang, and Ang Li
Geosci. Model Dev., 15, 995–1015, https://doi.org/10.5194/gmd-15-995-2022, https://doi.org/10.5194/gmd-15-995-2022, 2022
Short summary
Short summary
SCSOFS has provided daily updated marine forecasting in the South China Sea for the next 5 d since 2013. Comprehensive updates have been conducted to the configurations of SCSOFS's physical model and data assimilation scheme in order to improve its forecasting skill. The three most sensitive updates are highlighted. Scientific comparison and accuracy assessment results indicate that remarkable improvements have been achieved in SCSOFSv2 with respect to the original version SCSOFSv1.
Tingfeng Wu, Boqiang Qin, Anning Huang, Yongwei Sheng, Shunxin Feng, and Céline Casenave
Geosci. Model Dev., 15, 745–769, https://doi.org/10.5194/gmd-15-745-2022, https://doi.org/10.5194/gmd-15-745-2022, 2022
Short summary
Short summary
Most hydrodynamic models were initially developed based in marine environments. They cannot be directly applied to large lakes. Based on field observations and numerical experiments of a large shallow lake, we developed a hydrodynamic model by adopting new schemes of wind stress, wind waves, and turbulence for large lakes. Our model can greatly improve the simulation of lake currents. This study will be a reminder to limnologists to prudently use ocean models to study lake hydrodynamics.
Jingyuan Li, Qinghe Zhang, and Tongqing Chen
Geosci. Model Dev., 15, 105–127, https://doi.org/10.5194/gmd-15-105-2022, https://doi.org/10.5194/gmd-15-105-2022, 2022
Short summary
Short summary
A numerical model, ISWFoam with a modified k–ω SST model, is developed to simulate internal solitary waves (ISWs) in continuously stratified, incompressible, viscous fluids based on a fully three-dimensional (3D) Navier–Stokes equation with the finite-volume method. ISWFoam can accurately simulate the generation and evolution of ISWs, the ISW breaking phenomenon, waveform inversion of ISWs, and the interaction between ISWs and complex topography.
Matthew P. Humphreys, Ernie R. Lewis, Jonathan D. Sharp, and Denis Pierrot
Geosci. Model Dev., 15, 15–43, https://doi.org/10.5194/gmd-15-15-2022, https://doi.org/10.5194/gmd-15-15-2022, 2022
Short summary
Short summary
The ocean helps to mitigate our impact on Earth's climate by absorbing about a quarter of the carbon dioxide (CO2) released by human activities each year. However, once absorbed, chemical reactions between CO2 and water reduce seawater pH (
ocean acidification), which may have adverse effects on marine ecosystems. Our Python package, PyCO2SYS, models the chemical reactions of CO2 in seawater, allowing us to quantify the corresponding changes in pH and related chemical properties.
Vera Fofonova, Tuomas Kärnä, Knut Klingbeil, Alexey Androsov, Ivan Kuznetsov, Dmitry Sidorenko, Sergey Danilov, Hans Burchard, and Karen Helen Wiltshire
Geosci. Model Dev., 14, 6945–6975, https://doi.org/10.5194/gmd-14-6945-2021, https://doi.org/10.5194/gmd-14-6945-2021, 2021
Short summary
Short summary
We present a test case of river plume spreading to evaluate coastal ocean models. Our test case reveals the level of numerical mixing (due to parameterizations used and numerical treatment of processes in the model) and the ability of models to reproduce complex dynamics. The major result of our comparative study is that accuracy in reproducing the analytical solution depends less on the type of applied model architecture or numerical grid than it does on the type of advection scheme.
Trevor J. McDougall, Paul M. Barker, Ryan M. Holmes, Rich Pawlowicz, Stephen M. Griffies, and Paul J. Durack
Geosci. Model Dev., 14, 6445–6466, https://doi.org/10.5194/gmd-14-6445-2021, https://doi.org/10.5194/gmd-14-6445-2021, 2021
Short summary
Short summary
We show that the way that the air–sea heat flux is treated in ocean models means that the model's temperature variable should be interpreted as being Conservative Temperature, irrespective of whether the equation of state used in an ocean model is EOS-80 or TEOS-10.
Paul R. Halloran, Jennifer K. McWhorter, Beatriz Arellano Nava, Robert Marsh, and William Skirving
Geosci. Model Dev., 14, 6177–6195, https://doi.org/10.5194/gmd-14-6177-2021, https://doi.org/10.5194/gmd-14-6177-2021, 2021
Short summary
Short summary
This paper describes the latest version of a simple model for simulating coastal oceanography in response to changes in weather and climate. The latest revision of this model makes scientific improvements but focuses on improvements that allow the model to be run simply at large scales and for long periods of time to explore the implications of (for example) future climate change along large areas of coastline.
Fucang Zhou, Jianzhong Ge, Dongyan Liu, Pingxing Ding, Changsheng Chen, and Xiaodao Wei
Geosci. Model Dev., 14, 6049–6070, https://doi.org/10.5194/gmd-14-6049-2021, https://doi.org/10.5194/gmd-14-6049-2021, 2021
Short summary
Short summary
In this study, a physical–ecological model, the Floating Macroalgal Growth and Drift Model (FMGDM), was developed to determine the dynamic growth and drifting pattern of floating macroalgae. Based on Lagrangian tracking, the macroalgae bloom is jointly controlled by ocean flows, sea surface wind, temperature, irradiation, and nutrients. The FMGDM was robust in successfully reproducing the spatial and temporal dynamics of the massive green tide around the Yellow Sea.
Tuomas Kärnä, Patrik Ljungemyr, Saeed Falahat, Ida Ringgaard, Lars Axell, Vasily Korabel, Jens Murawski, Ilja Maljutenko, Anja Lindenthal, Simon Jandt-Scheelke, Svetlana Verjovkina, Ina Lorkowski, Priidik Lagemaa, Jun She, Laura Tuomi, Adam Nord, and Vibeke Huess
Geosci. Model Dev., 14, 5731–5749, https://doi.org/10.5194/gmd-14-5731-2021, https://doi.org/10.5194/gmd-14-5731-2021, 2021
Short summary
Short summary
We present Nemo-Nordic 2.0, a novel operational marine model for the Baltic Sea. The model covers the Baltic Sea and the North Sea with approximately 1 nmi resolution. We validate the model's performance against sea level, water temperature, and salinity observations, as well as sea ice charts. The skill analysis demonstrates that Nemo-Nordic 2.0 can reproduce the hydrographic features of the Baltic Sea.
David A. Griffin, Mike Herzfeld, Mark Hemer, and Darren Engwirda
Geosci. Model Dev., 14, 5561–5582, https://doi.org/10.5194/gmd-14-5561-2021, https://doi.org/10.5194/gmd-14-5561-2021, 2021
Short summary
Short summary
In support of the developing ocean renewable energy sector, and indeed all mariners, we have developed a new tidal model for Australian waters and thoroughly evaluated it using a new compilation of tide gauge and current meter data. We show that while there is certainly room for improvement, the model provides useful predictions of tidal currents for about 80 % (by area) of Australian shelf waters. So we intend to commence publishing tidal current predictions for those regions soon.
Jingzhe Li, Piyang Liu, Shuyu Sun, Zhifeng Sun, Yongzhang Zhou, Liang Gong, Jinliang Zhang, and Dongxing Du
Geosci. Model Dev., 14, 4925–4937, https://doi.org/10.5194/gmd-14-4925-2021, https://doi.org/10.5194/gmd-14-4925-2021, 2021
Short summary
Short summary
This paper introduces Sedapp, a basin fill simulation tool. Sedapp is an open-source computer code written in R language. Using this program, one can simulate the formation of sedimentary strata, especially in shallow marine environments injected by rivers. With proper parameter settings, the simulation results are very similar to the real geological bodies. Sedapp can also be used in continental fault basin environments, which may serve as a tool for oil exploration.
Gwenaëlle Gremion, Louis-Philippe Nadeau, Christiane Dufresne, Irene R. Schloss, Philippe Archambault, and Dany Dumont
Geosci. Model Dev., 14, 4535–4554, https://doi.org/10.5194/gmd-14-4535-2021, https://doi.org/10.5194/gmd-14-4535-2021, 2021
Short summary
Short summary
An accurate description of detritic organic particles is key to improving estimations of carbon export into the ocean abyss in ocean general circulation models. Yet, most parametrization are numerically impractical due to the required number of tracers needed to resolve the particle size spectrum. Here, a new parametrization that aims to minimize the tracers number while accurately describing the particles dynamics is developed and tested in a series of idealized numerical experiments.
Christo Rautenbach, Julia C. Mullarney, and Karin R. Bryan
Geosci. Model Dev., 14, 4241–4247, https://doi.org/10.5194/gmd-14-4241-2021, https://doi.org/10.5194/gmd-14-4241-2021, 2021
Short summary
Short summary
The simulation of ocean waves is important for various reasons, e.g. ship route safety and coastal vulnerability assessments. SWAN is a popular tool with which ocean waves may be predicted. Simulations using this tool can be computationally expensive. The present study thus aimed to understand which typical parallel-computing SWAN model set-up will be most effective. There thus do exist configurations where these simulations are most time-saving and effective.
Qing Li, Jorn Bruggeman, Hans Burchard, Knut Klingbeil, Lars Umlauf, and Karsten Bolding
Geosci. Model Dev., 14, 4261–4282, https://doi.org/10.5194/gmd-14-4261-2021, https://doi.org/10.5194/gmd-14-4261-2021, 2021
Short summary
Short summary
Different ocean vertical mixing schemes are usually developed in different modeling framework, making the comparison across such schemes difficult. Here, we develop a consistent framework for testing, comparing, and applying different ocean mixing schemes by integrating CVMix into GOTM, which also extends the capability of GOTM towards including the effects of ocean surface waves. A suite of test cases and toolsets for developing and evaluating ocean mixing schemes is also described.
Julien Jouanno, Rachid Benshila, Léo Berline, Antonin Soulié, Marie-Hélène Radenac, Guillaume Morvan, Frédéric Diaz, Julio Sheinbaum, Cristele Chevalier, Thierry Thibaut, Thomas Changeux, Frédéric Menard, Sarah Berthet, Olivier Aumont, Christian Ethé, Pierre Nabat, and Marc Mallet
Geosci. Model Dev., 14, 4069–4086, https://doi.org/10.5194/gmd-14-4069-2021, https://doi.org/10.5194/gmd-14-4069-2021, 2021
Short summary
Short summary
The tropical Atlantic has been facing a massive proliferation of Sargassum since 2011, with severe environmental and socioeconomic impacts. We developed a modeling framework based on the NEMO ocean model, which integrates transport by currents and waves, and physiology of Sargassum with varying internal nutrient quota, and considers stranding at the coast. Results demonstrate the ability of the model to reproduce and forecast the seasonal cycle and large-scale distribution of Sargassum biomass.
Andrew Yool, Julien Palmiéri, Colin G. Jones, Lee de Mora, Till Kuhlbrodt, Ekatarina E. Popova, A. J. George Nurser, Joel Hirschi, Adam T. Blaker, Andrew C. Coward, Edward W. Blockley, and Alistair A. Sellar
Geosci. Model Dev., 14, 3437–3472, https://doi.org/10.5194/gmd-14-3437-2021, https://doi.org/10.5194/gmd-14-3437-2021, 2021
Short summary
Short summary
The ocean plays a key role in modulating the Earth’s climate. Understanding this role is critical when using models to project future climate change. Consequently, it is necessary to evaluate their realism against the ocean's observed state. Here we validate UKESM1, a new Earth system model, focusing on the realism of its ocean physics and circulation, as well as its biological cycles and productivity. While we identify biases, generally the model performs well over a wide range of properties.
Sebastiaan J. van de Velde, Dominik Hülse, Christopher T. Reinhard, and Andy Ridgwell
Geosci. Model Dev., 14, 2713–2745, https://doi.org/10.5194/gmd-14-2713-2021, https://doi.org/10.5194/gmd-14-2713-2021, 2021
Short summary
Short summary
Biogeochemical interactions between iron and sulfur are central to the long-term biogeochemical evolution of Earth’s oceans. Here, we introduce an iron–sulphur cycle in a model of Earth's oceans. Our analyses show that the results of the model are robust towards parameter choices and that simulated concentrations and reactions are comparable to those observed in ancient ocean analogues (anoxic lakes). Our model represents an important step forward in the study of iron–sulfur cycling.
Katherine M. Smith, Skyler Kern, Peter E. Hamlington, Marco Zavatarelli, Nadia Pinardi, Emily F. Klee, and Kyle E. Niemeyer
Geosci. Model Dev., 14, 2419–2442, https://doi.org/10.5194/gmd-14-2419-2021, https://doi.org/10.5194/gmd-14-2419-2021, 2021
Short summary
Short summary
We present a newly developed reduced-order biogeochemical flux model that is complex and flexible enough to capture open-ocean ecosystem dynamics but reduced enough to incorporate into highly resolved numerical simulations with limited additional computational cost. The model provides improved correlations between model output and field data, indicating that significant improvements in the reproduction of real-world data can be achieved with a small number of variables.
Chia-Wei Hsu, Jianjun Yin, Stephen M. Griffies, and Raphael Dussin
Geosci. Model Dev., 14, 2471–2502, https://doi.org/10.5194/gmd-14-2471-2021, https://doi.org/10.5194/gmd-14-2471-2021, 2021
Short summary
Short summary
The new surface forcing from JRA55-do (OMIP II) significantly improved the underestimated sea level trend across the entire Pacific Ocean along 10° N in the simulation forced by CORE (OMIP I). We summarize and list out the reasons for the existing sea level biases across all studied timescales as a reference for improving the sea level simulation in the future. This study on the evaluation and improvement of ocean climate models should be of broad interest to a large modeling community.
Cited articles
Adcroft, A., Anderson, W., Balaji, V., Blanton, C., Bushuk, M., Dufour, C. O.,
Dunne, J. P., Griffies, S. M., Hallberg, R. W., Harrison, M. J., Held, I.,
Jansen, M. F., John, J., Krasting, J. P., Langenhorst, A., Legg, S., Liang,
Z., McHugh, C., Radhakrishnan, A., Reichl, B. G., Rosati, T., Samuels, B. L.,
Shao, A., Stouffer, R., Winton, M., Wittenberg, A. T., Xiang, B., Zadeh, N.,
and Zhang, R.: The GFDL Global Ocean and Sea Ice Model OM4.0:
Model Description and Simulation Features, J. Adv. Model. Earth Sy., 11, 3167–3211, https://doi.org/10.1029/2019MS001726, 2019. a, b, c, d
Anstey, J. A. and Zanna, L.: A deformation-based parametrization of ocean
mesoscale eddy reynolds stresses, Ocean Model., 112, 99–111,
https://doi.org/10.1016/j.ocemod.2017.02.004, 2017. a
Arakawa, A. and Hsu, Y.-J. G.: Energy Conserving and Potential-Enstrophy
Dissipating Schemes for the Shallow Water Equations, Mon.
Weather Rev., 118, 1960–1969,
https://doi.org/10.1175/1520-0493(1990)118<1960:ECAPED>2.0.CO;2, 1990. a
Arbic, B. K. and Flierl, G. R.: Baroclinically Unstable Geostrophic
Turbulence in the Limits of Strong and Weak Bottom Ekman
Friction: Application to Midocean Eddies, J. Phys.
Oceanogr., 34, 2257–2273,
https://doi.org/10.1175/1520-0485(2004)034<2257:BUGTIT>2.0.CO;2, 2004. a, b
Arbic, B. K., Scott, R. B., Flierl, G. R., Morten, A. J., Richman, J. G., and
Shriver, J. F.: Nonlinear Cascades of Surface Oceanic Geostrophic
Kinetic Energy in the Frequency Domain, J. Phys.
Oceanogr., 42, 1577–1600, https://doi.org/10.1175/JPO-D-11-0151.1, 2012. a
Bachman, S. D.: The GM+E closure: A framework for coupling backscatter with
the Gent and McWilliams parameterization, Ocean Model.g, 136, 85–106,
https://doi.org/10.1016/j.ocemod.2019.02.006, 2019. a
Bachman, S. D., Fox-Kemper, B., and Pearson, B.: A scale-aware subgrid model
for quasi-geostrophic turbulence, J. Geophys. Res.-Oceans,
122, 1529–1554, https://doi.org/10.1002/2016JC012265, 2017. a, b, c
Barthel, A., Hogg, A. M., Waterman, S., and Keating, S.: Jet–Topography
Interactions Affect Energy Pathways to the Deep Southern Ocean,
J. Phys. Oceanogr., 47, 1799–1816,
https://doi.org/10.1175/JPO-D-16-0220.1, 2017. a
Bhamidipati, N., Adcroft, A., Marques, G., and Abernathey, R.: ocean-eddy-cpt/NeverWorld2: NeverWorld2-description-paper (v1.1), Zenodo [code], https://doi.org/10.5281/zenodo.6993951, 2022. a
Cessi, P.: An Energy-Constrained Parameterization of Eddy Buoyancy
Flux, J. Phys. Oceanogr., 38, 1807–1819,
https://doi.org/10.1175/2007JPO3812.1, 2008. a
Chaudhuri, A. H., Ponte, R. M., Forget, G., and Heimbach, P.: A Comparison of
Atmospheric Reanalysis Surface Products over the Ocean and
Implications for Uncertainties in Air–Sea Boundary Forcing,
J. Climate, 26, 153–170, https://doi.org/10.1175/JCLI-D-12-00090.1, 2013. a
Chelton, D. B., deSzoeke, R. A., Schlax, M. G., El Naggar, K., and Siwertz, N.:
Geographical Variability of the First Baroclinic Rossby Radius of
Deformation, J. Phys. Oceanogr., 28, 433–460,
https://doi.org/10.1175/1520-0485(1998)028<0433:GVOTFB>2.0.CO;2, 1998. a
Danabasoglu, G., McWilliams, J. C., and Gent, P. R.: The Role of
Mesoscale Tracer Transports in the Global Ocean Circulation,
Science, 264, 1123–1126, https://doi.org/10.1126/science.264.5162.1123, 1994. a
Eden, C. and Greatbatch, R. J.: Towards a mesoscale eddy closure, Ocean
Model., 20, 223–239, https://doi.org/10.1016/j.ocemod.2007.09.002, 2008. a
Gent, P. R. and McWilliams, J. C.: Isopycnal Mixing in Ocean Circulation
Models, J. Phys. Oceanogr., 20, 150–155,
https://doi.org/10.1175/1520-0485(1990)020<0150:IMIOCM>2.0.CO;2, 1990. a
Gent, P. R., Willebrand, J., McDougall, T. J., and McWilliams, J. C.:
Parameterizing Eddy-Induced Tracer Transports in Ocean
Circulation Models, J. Phys. Oceanogr., 25, 463–474,
https://doi.org/10.1175/1520-0485(1995)025<0463:PEITTI>2.0.CO;2, 1995. a
Griffies, S. M. and Hallberg, R. W.: Biharmonic Friction with a
Smagorinsky-Like Viscosity for Use in Large-Scale
Eddy-Permitting Ocean Models, Mon. Weather Rev., 128,
2935–2946, https://doi.org/10.1175/1520-0493(2000)128<2935:BFWASL>2.0.CO;2, 2000. a, b, c
Griffies, S. M., Adcroft, A., and Hallberg, R. W.: A Primer on the Vertical
Lagrangian-Remap Method in Ocean Models Based on Finite
Volume Generalized Vertical Coordinates, J. Adv.
Model. Earth Sy., 12, e2019MS001954, https://doi.org/10.1029/2019MS001954,
2020. a
Hallberg, R.: Using a resolution function to regulate parameterizations of
oceanic mesoscale eddy effects, Ocean Model., 72, 92–103,
https://doi.org/10.1016/j.ocemod.2013.08.007, 2013. a, b, c
Hewitt, H. T., Roberts, M., Mathiot, P., Biastoch, A., Blockley, E.,
Chassignet, E. P., Fox-Kemper, B., Hyder, P., Marshall, D. P., Popova, E.,
Treguier, A.-M., Zanna, L., Yool, A., Yu, Y., Beadling, R., Bell, M.,
Kuhlbrodt, T., Arsouze, T., Bellucci, A., Castruccio, F., Gan, B.,
Putrasahan, D., Roberts, C. D., Van Roekel, L., and Zhang, Q.: Resolving and
Parameterising the Ocean Mesoscale in Earth System Models,
Current Climate Change Reports, 6, 137–152,
https://doi.org/10.1007/s40641-020-00164-w, 2020. a
Jansen, M. F. and Held, I. M.: Parameterizing subgrid-scale eddy effects using
energetically consistent backscatter, Ocean Model., 80, 36–48,
https://doi.org/10.1016/j.ocemod.2014.06.002, 2014. a
Jansen, M. F., Adcroft, A., Khani, S., and Kong, H.: Toward an Energetically
Consistent, Resolution Aware Parameterization of Ocean Mesoscale
Eddies, J. Adv. Model. Earth Sy., 11, 2844–2860,
https://doi.org/10.1029/2019MS001750, 2019. a, b
Khani, S., Jansen, M. F., and Adcroft, A.: Diagnosing subgrid mesoscale eddy
fluxes with and without topography, J. Adv. Model. Earth
Sy., 11, 3995–4015, https://doi.org/10.1029/2019MS001721, 2019. a
Kjellsson, J. and Zanna, L.: The Impact of Horizontal Resolution on Energy
Transfers in Global Ocean Models, Fluids, 2, 45, https://doi.org/10.3390/fluids2030045,
2017. a
Kong, H. and Jansen, M. F.: The impact of topography and eddy parameterization
on the simulated Southern Ocean circulation response to changes in
surface wind stress, J. Phys. Oceanogr., 1, 825–843,
https://doi.org/10.1175/JPO-D-20-0142.1, 2020. a
Loose, N., Abernathey, R., Grooms, I., Busecke, J., Guillaumin, A., Yankovsky,
E., Marques, G., Steinberg, J., Ross, A. S., Khatri, H., Bachman, S., Zanna,
L., and Martin, P.: GCM-Filters: A Python Package for
Diffusion-based Spatial Filtering of Gridded Data, J. Open
Source Softw., 7, 3947, https://doi.org/10.21105/joss.03947, 2022a. a
Loose, N., Bachman, S., GROOMS, I., and Jansen, M.: Diagnosing scale-dependent
energy cycles in a high-resolution isopycnal ocean model, Earth and
Space Science Open Archive [data set],
https://doi.org/10.1002/essoar.10511055.1, 2022b. a
Marques, G., Loose, N., Yankovsky, E., Steinberg, J., Chang, C.-Y., Bhamidipati, N., Adcroft, A., Fox-Kemper, B., Griffies, S., Hallberg, R., Jansen, M., Khatri, H., and Zanna, L.:
NeverWorld2 Dataset, NeverWorld2 [data set], https://doi.org/10.26024/f130-ev71, 2022. a
Marshall, D. P. and Adcroft, A. J.: Parameterization of ocean eddies:
Potential vorticity mixing, energetics and Arnold's first stability
theorem, Ocean Model., 32, 188–204, https://doi.org/10.1016/j.ocemod.2010.02.001,
2010. a
Marshall, D. P., Maddison, J. R., and Berloff, P. S.: A Framework for
Parameterizing Eddy Potential Vorticity Fluxes, J. Phys.
Oceanogr., 42, 539–557, https://doi.org/10.1175/JPO-D-11-048.1, 2012.
a
Marshall, J. and Radko, T.: Residual-Mean Solutions for the Antarctic
Circumpolar Current and Its Associated Overturning Circulation,
J. Phys. Oceanogr., 33, 2341–2354,
https://doi.org/10.1175/1520-0485(2003)033<2341:RSFTAC>2.0.CO;2, 2003. a
McClean, J. L., Bader, D. C., Bryan, F. O., Maltrud, M. E., Dennis, J. M.,
Mirin, A. A., Jones, P. W., Kim, Y. Y., Ivanova, D. P., Vertenstein, M.,
Boyle, J. S., Jacob, R. L., Norton, N., Craig, A., and Worley, P. H.: A
prototype two-decade fully-coupled fine-resolution CCSM simulation, Ocean
Model., 39, 10–30, https://doi.org/10.1016/j.ocemod.2011.02.011, 2011. a
Pearson, B., Fox-Kemper, B., Bachman, S., and Bryan, F.: Evaluation of
scale-aware subgrid mesoscale eddy models in a global eddy-rich model, Ocean
Model., 115, 42–58, https://doi.org/10.1016/j.ocemod.2017.05.007, 2017. a
Pietarila Graham, J. and Ringler, T.: A framework for the evaluation of
turbulence closures used in mesoscale ocean large-eddy simulations, Ocean
Model., 65, 25–39, https://doi.org/10.1016/j.ocemod.2013.01.004, 2013. a
Smith, K. S. and Vallis, G. K.: The Scales and Equilibration of Midocean
Eddies: Forced–Dissipative Flow, J. Phys. Oceanogr.,
32, 1699–1720, https://doi.org/10.1175/1520-0485(2002)032<1699:TSAEOM>2.0.CO;2, 2002. a, b, c
Soufflet, Y., Marchesiello, P., Lemarié, F., Jouanno, J., Capet, X., Debreu,
L., and Benshila, R.: On effective resolution in ocean models, Ocean
Model., 98, 36–50, https://doi.org/10.1016/j.ocemod.2015.12.004, 2016. a
Thompson, A. F. and Young, W. R.: Two-Layer Baroclinic Eddy Heat
Fluxes: Zonal Flows and Energy Balance, J. Atmos.
Sci., 64, 3214–3231, https://doi.org/10.1175/JAS4000.1, 2007. a, b
Treguier, A. M., Held, I. M., and Larichev, V. D.: Parameterization of
Quasigeostrophic Eddies in Primitive Equation Ocean Models,
J. Phys. Oceanogr., 27, 567–580,
https://doi.org/10.1175/1520-0485(1997)027<0567:POQEIP>2.0.CO;2, 1997. a
Uchida, T., Rokem, A., Nicholas, T., Abernathey, R., Nouguier, F., Vanderplas,
J., Martin, P., Mayer, A., Halchenko, Y., Wilson, G., Constantinou, N. C.,
Ponte, A., Squire, D., Busecke, J., Spring, A., Pak, K., and Hoyer, S.:
xgcm/xrft: v0.3.1-rc0, https://doi.org/10.5281/zenodo.5503856, 2021. a
Wolfe, C. L. and Cessi, P.: Overturning Circulation in an Eddy-Resolving
Model: The Effect of the Pole-to-Pole Temperature Gradient,
J. Phys. Oceanogr., 39, 125–142, https://doi.org/10.1175/2008JPO3991.1,
2009. a, b
Yankovsky, E., Zanna, L., and Smith, K. S.: Influences of Mesoscale Ocean
Eddies on Flow Vertical Structure in a Resolution-Based Model
Hierarchy, Earth and Space Science Open Archive, https://doi.org/10.1002/essoar.10511501.1, 2022. a
Short summary
We present an idealized ocean model configuration and a set of simulations performed using varying horizontal grid spacing. While the model domain is idealized, it resembles important geometric features of the Atlantic and Southern oceans. The simulations described here serve as a framework to effectively study mesoscale eddy dynamics, to investigate the effect of mesoscale eddies on the large-scale dynamics, and to test and evaluate eddy parameterizations.
We present an idealized ocean model configuration and a set of simulations performed using...
