Articles | Volume 13, issue 9
https://doi.org/10.5194/gmd-13-4503-2020
https://doi.org/10.5194/gmd-13-4503-2020
Model description paper
 | 
25 Sep 2020
Model description paper |  | 25 Sep 2020

CSIRO Environmental Modelling Suite (EMS): scientific description of the optical and biogeochemical models (vB3p0)

Mark E. Baird, Karen A. Wild-Allen, John Parslow, Mathieu Mongin, Barbara Robson, Jennifer Skerratt, Farhan Rizwi, Monika Soja-Woźniak, Emlyn Jones, Mike Herzfeld, Nugzar Margvelashvili, John Andrewartha, Clothilde Langlais, Matthew P. Adams, Nagur Cherukuru, Malin Gustafsson, Scott Hadley, Peter J. Ralph, Uwe Rosebrock, Thomas Schroeder, Leonardo Laiolo, Daniel Harrison, and Andrew D. L. Steven

Related authors

The Historical Representation and Near Future (2050) Projections of the Coral Sea Current System in CMIP6 HighResMIP
Jodie Anne Schlaefer, Clothilde Langlais, Severine Marie Choukroun, Mathieu Mongin, and Mark E. Baird
EGUsphere, https://doi.org/10.22541/essoar.173282297.70109457/v1,https://doi.org/10.22541/essoar.173282297.70109457/v1, 2025
Short summary
Use of remote-sensing reflectance to constrain a data assimilating marine biogeochemical model of the Great Barrier Reef
Emlyn M. Jones, Mark E. Baird, Mathieu Mongin, John Parslow, Jenny Skerratt, Jenny Lovell, Nugzar Margvelashvili, Richard J. Matear, Karen Wild-Allen, Barbara Robson, Farhan Rizwi, Peter Oke, Edward King, Thomas Schroeder, Andy Steven, and John Taylor
Biogeosciences, 13, 6441–6469, https://doi.org/10.5194/bg-13-6441-2016,https://doi.org/10.5194/bg-13-6441-2016, 2016
Short summary

Related subject area

Oceanography
GREAT v1.0: Global Real-time Early Assessment of Tsunamis
Usama Kadri, Ali Abdolali, and Maxim Filimonov
Geosci. Model Dev., 18, 3487–3507, https://doi.org/10.5194/gmd-18-3487-2025,https://doi.org/10.5194/gmd-18-3487-2025, 2025
Short summary
Using automatic calibration to improve the physics behind complex numerical models: an example from a 3D lake model using Delft3D (v6.02.10) and DYNO-PODS (v1.0)
Marina Amadori, Abolfazl Irani Rahaghi, Damien Bouffard, and Marco Toffolon
Geosci. Model Dev., 18, 3473–3486, https://doi.org/10.5194/gmd-18-3473-2025,https://doi.org/10.5194/gmd-18-3473-2025, 2025
Short summary
Improvements to the Met Office's global ocean–sea ice forecasting system including model and data assimilation changes
Davi Mignac, Jennifer Waters, Daniel J. Lea, Matthew J. Martin, James While, Anthony T. Weaver, Arthur Vidard, Catherine Guiavarc'h, Dave Storkey, David Ford, Edward W. Blockley, Jonathan Baker, Keith Haines, Martin R. Price, Michael J. Bell, and Richard Renshaw
Geosci. Model Dev., 18, 3405–3425, https://doi.org/10.5194/gmd-18-3405-2025,https://doi.org/10.5194/gmd-18-3405-2025, 2025
Short summary
Resolution dependence of interlinked Southern Ocean biases in global coupled HadGEM3 models
David Storkey, Pierre Mathiot, Michael J. Bell, Dan Copsey, Catherine Guiavarc'h, Helene T. Hewitt, Jeff Ridley, and Malcolm J. Roberts
Geosci. Model Dev., 18, 2725–2745, https://doi.org/10.5194/gmd-18-2725-2025,https://doi.org/10.5194/gmd-18-2725-2025, 2025
Short summary
A new global high-resolution wave model for the tropical ocean using WAVEWATCH III version 7.14
Axelle Gaffet, Xavier Bertin, Damien Sous, Héloïse Michaud, Aron Roland, and Emmanuel Cordier
Geosci. Model Dev., 18, 1929–1946, https://doi.org/10.5194/gmd-18-1929-2025,https://doi.org/10.5194/gmd-18-1929-2025, 2025
Short summary

Cited articles

Anthony, K. R. N., Kleypas, J. A., and Gattuso, J.-P.: Coral reefs modify their seawater carbon chemistry - implications for impacts of ocean acidification, Glob. Change Biol., 17, 3655–3666, 2011. a
Atkins, P. W.: Physical Chemistry, Oxford University Press, Oxford, 5th Edn., 1994. a
Atkinson, M. J.: Productivity of Eniwetak Atoll reef predicted from mass-transfer relationships, Cont. Shelf Res., 12, 799–807, 1992. a
Atkinson, M. J. and Bilger, B. W.: Effects of water velocity on phosphate uptake in coral reef-flat communities, Limnol. Oceanogr., 37, 273–279, 1992. a
Atkinson, M. J. and Smith, S. V.: C:N:P ratios of benthic marine plants, Limnol. Oceanogr., 28, 568–574, 1983. a
Download
Short summary
For 20+ years, the Commonwealth Science Industry and Research Organisation (CSIRO) has been developing a biogeochemical (BGC) model for coupling with a hydrodynamic and sediment model for application in estuaries, coastal waters and shelf seas. This paper provides a full mathematical description (equations, parameters), model evaluation and access to the numerical code. The model is particularly suited to applications in shallow waters where benthic processes are critical to ecosystem function.
Share