Articles | Volume 14, issue 10
https://doi.org/10.5194/gmd-14-6177-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-14-6177-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Model description paper
| 
15 Oct 2021
Model description paper |
| 15 Oct 2021
| 15 Oct 2021
S2P3-R v2.0: computationally efficient modelling of shelf seas on regional to global scales
College of Life and Environmental Sciences, University of Exeter,
Exeter, UK
Jennifer K. McWhorter
College of Life and Environmental Sciences, University of Exeter,
Exeter, UK
School of Biological Sciences, the University of Queensland, Brisbane,
Queensland, Australia
Beatriz Arellano Nava
College of Life and Environmental Sciences, University of Exeter,
Exeter, UK
Robert Marsh
University of Southampton, National Oceanography Centre, Southampton,
UK
William Skirving
Coral Reef Watch, National Oceanic and Atmospheric Administration,
College Park, MD, USA
ReefSense Pty Ltd, Cranbrook, Queensland, Australia
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Jim M. Haywood, Andy Jones, Anthony C. Jones, Paul Halloran, and Philip J. Rasch
Atmos. Chem. Phys., 23, 15305–15324, https://doi.org/10.5194/acp-23-15305-2023, https://doi.org/10.5194/acp-23-15305-2023, 2023
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The difficulties in ameliorating global warming and the associated climate change via conventional mitigation are well documented, with all climate model scenarios exceeding 1.5 °C above the preindustrial level in the near future. There is therefore a growing interest in geoengineering to reflect a greater proportion of sunlight back to space and offset some of the global warming. We use a state-of-the-art Earth-system model to investigate two of the most prominent geoengineering strategies.
George Manville, Thomas G. Bell, Jane P. Mulcahy, Rafel Simó, Martí Galí, Anoop S. Mahajan, Shrivardhan Hulswar, and Paul R. Halloran
Biogeosciences, 20, 1813–1828, https://doi.org/10.5194/bg-20-1813-2023, https://doi.org/10.5194/bg-20-1813-2023, 2023
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We present the first global investigation of controls on seawater dimethylsulfide (DMS) spatial variability over scales of up to 100 km. Sea surface height anomalies, density, and chlorophyll a help explain almost 80 % of DMS variability. The results suggest that physical and biogeochemical processes play an equally important role in controlling DMS variability. These data provide independent confirmation that existing parameterisations of seawater DMS concentration use appropriate variables.
Shrivardhan Hulswar, Rafel Simó, Martí Galí, Thomas G. Bell, Arancha Lana, Swaleha Inamdar, Paul R. Halloran, George Manville, and Anoop Sharad Mahajan
Earth Syst. Sci. Data, 14, 2963–2987, https://doi.org/10.5194/essd-14-2963-2022, https://doi.org/10.5194/essd-14-2963-2022, 2022
Short summary
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The third climatological estimation of sea surface dimethyl sulfide (DMS) concentrations based on in situ measurements was created (DMS-Rev3). The update includes a much larger input dataset and includes improvements in the data unification, filtering, and smoothing algorithm. The DMS-Rev3 climatology provides more realistic monthly estimates of DMS, and shows significant regional differences compared to past climatologies.
Matthew P. Couldrey, Kevin I. C. Oliver, Andrew Yool, Paul R. Halloran, and Eric P. Achterberg
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-16, https://doi.org/10.5194/bg-2019-16, 2019
Revised manuscript not accepted
Short summary
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Determining how much carbon dioxide (CO2) the oceans absorb is key to predicting human-caused climate change. A computer model of the ocean shows how the North Atlantic will change up to the end of the century. Year-to-year variations are mostly caused by changes in ocean temperature and seawater chemistry, altering CO2 solubility. By 2100, human emissions cause the biggest changes. The near term changes are physically driven, which may be more predictable than biological changes.
Roland Séférian, Marion Gehlen, Laurent Bopp, Laure Resplandy, James C. Orr, Olivier Marti, John P. Dunne, James R. Christian, Scott C. Doney, Tatiana Ilyina, Keith Lindsay, Paul R. Halloran, Christoph Heinze, Joachim Segschneider, Jerry Tjiputra, Olivier Aumont, and Anastasia Romanou
Geosci. Model Dev., 9, 1827–1851, https://doi.org/10.5194/gmd-9-1827-2016, https://doi.org/10.5194/gmd-9-1827-2016, 2016
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This paper explores how the large diversity in spin-up protocols used for ocean biogeochemistry in CMIP5 models contributed to inter-model differences in modeled fields. We show that a link between spin-up duration and skill-score metrics emerges from both individual IPSL-CM5A-LR's results and an ensemble of CMIP5 models. Our study suggests that differences in spin-up protocols constitute a source of inter-model uncertainty which would require more attention in future intercomparison exercises.
P. R. Halloran, B. B. B. Booth, C. D. Jones, F. H. Lambert, D. J. McNeall, I. J. Totterdell, and C. Völker
Biogeosciences, 12, 4497–4508, https://doi.org/10.5194/bg-12-4497-2015, https://doi.org/10.5194/bg-12-4497-2015, 2015
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The oceans currently take up around a quarter of the carbon dioxide (CO2) emitted by human activity. While stored in the ocean, this CO2 is not causing global warming. Here we explore high latitude North Atlantic CO2 uptake across a set of climate model simulations, and find that the models show a peak in ocean CO2 uptake around the middle of the century after which time CO2 uptake begins to decline. We identify the causes of this long-term change and interannual variability in the models.
L. Kwiatkowski, A. Yool, J. I. Allen, T. R. Anderson, R. Barciela, E. T. Buitenhuis, M. Butenschön, C. Enright, P. R. Halloran, C. Le Quéré, L. de Mora, M.-F. Racault, B. Sinha, I. J. Totterdell, and P. M. Cox
Biogeosciences, 11, 7291–7304, https://doi.org/10.5194/bg-11-7291-2014, https://doi.org/10.5194/bg-11-7291-2014, 2014
J. H. T. Williams, I. J. Totterdell, P. R. Halloran, and P. J. Valdes
Geosci. Model Dev., 7, 1419–1431, https://doi.org/10.5194/gmd-7-1419-2014, https://doi.org/10.5194/gmd-7-1419-2014, 2014
L. Bopp, L. Resplandy, J. C. Orr, S. C. Doney, J. P. Dunne, M. Gehlen, P. Halloran, C. Heinze, T. Ilyina, R. Séférian, J. Tjiputra, and M. Vichi
Biogeosciences, 10, 6225–6245, https://doi.org/10.5194/bg-10-6225-2013, https://doi.org/10.5194/bg-10-6225-2013, 2013
O. D. Andrews, N. L. Bindoff, P. R. Halloran, T. Ilyina, and C. Le Quéré
Biogeosciences, 10, 1799–1813, https://doi.org/10.5194/bg-10-1799-2013, https://doi.org/10.5194/bg-10-1799-2013, 2013
F. Joos, R. Roth, J. S. Fuglestvedt, G. P. Peters, I. G. Enting, W. von Bloh, V. Brovkin, E. J. Burke, M. Eby, N. R. Edwards, T. Friedrich, T. L. Frölicher, P. R. Halloran, P. B. Holden, C. Jones, T. Kleinen, F. T. Mackenzie, K. Matsumoto, M. Meinshausen, G.-K. Plattner, A. Reisinger, J. Segschneider, G. Shaffer, M. Steinacher, K. Strassmann, K. Tanaka, A. Timmermann, and A. J. Weaver
Atmos. Chem. Phys., 13, 2793–2825, https://doi.org/10.5194/acp-13-2793-2013, https://doi.org/10.5194/acp-13-2793-2013, 2013
Paul Dees, Friederike Fröb, Beatriz Arellano-Nava, David G. Johns, and Christoph Heinze
EGUsphere, https://doi.org/10.5194/egusphere-2025-470, https://doi.org/10.5194/egusphere-2025-470, 2025
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In this paper we describe a novel methodology to automate the estimation of ecological regime shift probability in a single time series. We have applied this new methodology to the continuous plankton recorder dataset in the North Sea, and shown how the model is able to estimate the likelihood of a regime shift using abundance data of multiple phytoplankton and zooplankton species.
Melissa Wood, Ivan D. Haigh, Quan Quan Le, Hung Nghia Nguyen, Hoang Ba Tran, Stephen E. Darby, Robert Marsh, Nikolaos Skliris, and Joël J.-M. Hirschi
Nat. Hazards Earth Syst. Sci., 24, 3627–3649, https://doi.org/10.5194/nhess-24-3627-2024, https://doi.org/10.5194/nhess-24-3627-2024, 2024
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We look at how compound flooding from the combination of river flooding and storm tides (storm surge and astronomical tide) may be changing over time due to climate change, with a case study of the Mekong River delta. We found that future compound flooding has the potential to flood the region more extensively and be longer lasting than compound floods today. This is useful to know because it means managers of deltas such as the Mekong can assess options for improving existing flood defences.
Vasilis Dakos, Chris A. Boulton, Joshua E. Buxton, Jesse F. Abrams, Beatriz Arellano-Nava, David I. Armstrong McKay, Sebastian Bathiany, Lana Blaschke, Niklas Boers, Daniel Dylewsky, Carlos López-Martínez, Isobel Parry, Paul Ritchie, Bregje van der Bolt, Larissa van der Laan, Els Weinans, and Sonia Kéfi
Earth Syst. Dynam., 15, 1117–1135, https://doi.org/10.5194/esd-15-1117-2024, https://doi.org/10.5194/esd-15-1117-2024, 2024
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Tipping points are abrupt, rapid, and sometimes irreversible changes, and numerous approaches have been proposed to detect them in advance. Such approaches have been termed early warning signals and represent a set of methods for identifying changes in the underlying behaviour of a system across time or space that might indicate an approaching tipping point. Here, we review the literature to explore where, how, and which early warnings have been used in real-world case studies so far.
Jim M. Haywood, Andy Jones, Anthony C. Jones, Paul Halloran, and Philip J. Rasch
Atmos. Chem. Phys., 23, 15305–15324, https://doi.org/10.5194/acp-23-15305-2023, https://doi.org/10.5194/acp-23-15305-2023, 2023
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The difficulties in ameliorating global warming and the associated climate change via conventional mitigation are well documented, with all climate model scenarios exceeding 1.5 °C above the preindustrial level in the near future. There is therefore a growing interest in geoengineering to reflect a greater proportion of sunlight back to space and offset some of the global warming. We use a state-of-the-art Earth-system model to investigate two of the most prominent geoengineering strategies.
George Manville, Thomas G. Bell, Jane P. Mulcahy, Rafel Simó, Martí Galí, Anoop S. Mahajan, Shrivardhan Hulswar, and Paul R. Halloran
Biogeosciences, 20, 1813–1828, https://doi.org/10.5194/bg-20-1813-2023, https://doi.org/10.5194/bg-20-1813-2023, 2023
Short summary
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We present the first global investigation of controls on seawater dimethylsulfide (DMS) spatial variability over scales of up to 100 km. Sea surface height anomalies, density, and chlorophyll a help explain almost 80 % of DMS variability. The results suggest that physical and biogeochemical processes play an equally important role in controlling DMS variability. These data provide independent confirmation that existing parameterisations of seawater DMS concentration use appropriate variables.
Shrivardhan Hulswar, Rafel Simó, Martí Galí, Thomas G. Bell, Arancha Lana, Swaleha Inamdar, Paul R. Halloran, George Manville, and Anoop Sharad Mahajan
Earth Syst. Sci. Data, 14, 2963–2987, https://doi.org/10.5194/essd-14-2963-2022, https://doi.org/10.5194/essd-14-2963-2022, 2022
Short summary
Short summary
The third climatological estimation of sea surface dimethyl sulfide (DMS) concentrations based on in situ measurements was created (DMS-Rev3). The update includes a much larger input dataset and includes improvements in the data unification, filtering, and smoothing algorithm. The DMS-Rev3 climatology provides more realistic monthly estimates of DMS, and shows significant regional differences compared to past climatologies.
Matthew Clark, Robert Marsh, and James Harle
Ocean Sci., 18, 549–564, https://doi.org/10.5194/os-18-549-2022, https://doi.org/10.5194/os-18-549-2022, 2022
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The European Slope Current (SC) is a northward-flowing current running parallel to the UK coastline. It is forced by changes in the density gradient of the wider North Atlantic Ocean. As the North Atlantic has warmed since the late 1990s, these gradients have changed strength and moved, reducing the volume and speed of water feeding into the SC. The SC flows into the North Sea, where changes in the species distribution of some plankton and fish have been seen due to the warming inputs.
Gandy Maria Rosales Quintana, Robert Marsh, and Luis Alfredo Icochea Salas
Ocean Sci., 17, 1385–1402, https://doi.org/10.5194/os-17-1385-2021, https://doi.org/10.5194/os-17-1385-2021, 2021
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The Equatorial Undercurrent (EUC) is a key influence on upwelling of nutrient-rich waters associated ecosystems off Peru. To quantify this influence, we backtrack upwelling waters in a computer model of ocean currents, annually, over 1989–2007. The EUC influence varies from year to year, dominating in warm El Niño years, when the EUC extends much closer to the Peruvian coast. In other years, more
localupwelling is associated with coastal winds, coincident with major key population shifts.
Emma L. Worthington, Ben I. Moat, David A. Smeed, Jennifer V. Mecking, Robert Marsh, and Gerard D. McCarthy
Ocean Sci., 17, 285–299, https://doi.org/10.5194/os-17-285-2021, https://doi.org/10.5194/os-17-285-2021, 2021
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The RAPID array has observed the Atlantic meridional overturning circulation (AMOC) since 2004, but the AMOC was directly calculated only five times from 1957–2004. Here we create a statistical regression model from RAPID data, relating AMOC changes to density changes within the different water masses at 26° N, and apply it to historical hydrographic data. The resulting 1981–2016 record shows that the AMOC from 2008–2012 was its weakest since the mid-1980s, but it shows no overall decline.
Matthew P. Couldrey, Kevin I. C. Oliver, Andrew Yool, Paul R. Halloran, and Eric P. Achterberg
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-16, https://doi.org/10.5194/bg-2019-16, 2019
Revised manuscript not accepted
Short summary
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Determining how much carbon dioxide (CO2) the oceans absorb is key to predicting human-caused climate change. A computer model of the ocean shows how the North Atlantic will change up to the end of the century. Year-to-year variations are mostly caused by changes in ocean temperature and seawater chemistry, altering CO2 solubility. By 2100, human emissions cause the biggest changes. The near term changes are physically driven, which may be more predictable than biological changes.
Robert Marsh, Ivan D. Haigh, Stuart A. Cunningham, Mark E. Inall, Marie Porter, and Ben I. Moat
Ocean Sci., 13, 315–335, https://doi.org/10.5194/os-13-315-2017, https://doi.org/10.5194/os-13-315-2017, 2017
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To the west of Britain and Ireland, a strong ocean current follows the steep slope that separates the deep Atlantic and the continental shelf. This “Slope Current” exerts an Atlantic influence on the North Sea and its ecosystems. Using a combination of computer modelling and archived data, we find that the Slope Current weakened over 1988–2007, reducing Atlantic influence on the North Sea, due to a combination of warming of the subpolar North Atlantic and weakening winds to the west of Scotland.
Roland Séférian, Marion Gehlen, Laurent Bopp, Laure Resplandy, James C. Orr, Olivier Marti, John P. Dunne, James R. Christian, Scott C. Doney, Tatiana Ilyina, Keith Lindsay, Paul R. Halloran, Christoph Heinze, Joachim Segschneider, Jerry Tjiputra, Olivier Aumont, and Anastasia Romanou
Geosci. Model Dev., 9, 1827–1851, https://doi.org/10.5194/gmd-9-1827-2016, https://doi.org/10.5194/gmd-9-1827-2016, 2016
Short summary
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This paper explores how the large diversity in spin-up protocols used for ocean biogeochemistry in CMIP5 models contributed to inter-model differences in modeled fields. We show that a link between spin-up duration and skill-score metrics emerges from both individual IPSL-CM5A-LR's results and an ensemble of CMIP5 models. Our study suggests that differences in spin-up protocols constitute a source of inter-model uncertainty which would require more attention in future intercomparison exercises.
R. Marsh, A. E. Hickman, and J. Sharples
Geosci. Model Dev., 8, 3163–3178, https://doi.org/10.5194/gmd-8-3163-2015, https://doi.org/10.5194/gmd-8-3163-2015, 2015
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Our relatively shallow shelf seas are warmed at the surface in spring and summer, while strong tidal currents act to mix away the surface warmth. These competing effects strongly influence the conditions for seasonal growth of the phytoplankton that support marine food webs. We have developed a versatile framework for fast computer modelling of shelf seas, to explore seasonal and year-to-year variations of warming and plankton productivity, tested against observations in different regions.
P. R. Halloran, B. B. B. Booth, C. D. Jones, F. H. Lambert, D. J. McNeall, I. J. Totterdell, and C. Völker
Biogeosciences, 12, 4497–4508, https://doi.org/10.5194/bg-12-4497-2015, https://doi.org/10.5194/bg-12-4497-2015, 2015
Short summary
Short summary
The oceans currently take up around a quarter of the carbon dioxide (CO2) emitted by human activity. While stored in the ocean, this CO2 is not causing global warming. Here we explore high latitude North Atlantic CO2 uptake across a set of climate model simulations, and find that the models show a peak in ocean CO2 uptake around the middle of the century after which time CO2 uptake begins to decline. We identify the causes of this long-term change and interannual variability in the models.
R. Marsh, V. O. Ivchenko, N. Skliris, S. Alderson, G. R. Bigg, G. Madec, A. T. Blaker, Y. Aksenov, B. Sinha, A. C. Coward, J. Le Sommer, N. Merino, and V. B. Zalesny
Geosci. Model Dev., 8, 1547–1562, https://doi.org/10.5194/gmd-8-1547-2015, https://doi.org/10.5194/gmd-8-1547-2015, 2015
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Calved icebergs account for around 50% of total freshwater input to the ocean from the Greenland and Antarctic ice sheets. As they melt, icebergs interact with the ocean. We have developed and tested interactive icebergs in a state-of-the-art global ocean model, showing how sea ice, temperatures, and currents are disturbed by iceberg melting. With this new model capability, we are better prepared to predict how future increases in iceberg numbers might influence the oceans and climate.
L. Kwiatkowski, A. Yool, J. I. Allen, T. R. Anderson, R. Barciela, E. T. Buitenhuis, M. Butenschön, C. Enright, P. R. Halloran, C. Le Quéré, L. de Mora, M.-F. Racault, B. Sinha, I. J. Totterdell, and P. M. Cox
Biogeosciences, 11, 7291–7304, https://doi.org/10.5194/bg-11-7291-2014, https://doi.org/10.5194/bg-11-7291-2014, 2014
J. H. T. Williams, I. J. Totterdell, P. R. Halloran, and P. J. Valdes
Geosci. Model Dev., 7, 1419–1431, https://doi.org/10.5194/gmd-7-1419-2014, https://doi.org/10.5194/gmd-7-1419-2014, 2014
L. Bopp, L. Resplandy, J. C. Orr, S. C. Doney, J. P. Dunne, M. Gehlen, P. Halloran, C. Heinze, T. Ilyina, R. Séférian, J. Tjiputra, and M. Vichi
Biogeosciences, 10, 6225–6245, https://doi.org/10.5194/bg-10-6225-2013, https://doi.org/10.5194/bg-10-6225-2013, 2013
O. D. Andrews, N. L. Bindoff, P. R. Halloran, T. Ilyina, and C. Le Quéré
Biogeosciences, 10, 1799–1813, https://doi.org/10.5194/bg-10-1799-2013, https://doi.org/10.5194/bg-10-1799-2013, 2013
F. Joos, R. Roth, J. S. Fuglestvedt, G. P. Peters, I. G. Enting, W. von Bloh, V. Brovkin, E. J. Burke, M. Eby, N. R. Edwards, T. Friedrich, T. L. Frölicher, P. R. Halloran, P. B. Holden, C. Jones, T. Kleinen, F. T. Mackenzie, K. Matsumoto, M. Meinshausen, G.-K. Plattner, A. Reisinger, J. Segschneider, G. Shaffer, M. Steinacher, K. Strassmann, K. Tanaka, A. Timmermann, and A. J. Weaver
Atmos. Chem. Phys., 13, 2793–2825, https://doi.org/10.5194/acp-13-2793-2013, https://doi.org/10.5194/acp-13-2793-2013, 2013
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The Ross Sea and Amundsen Sea Ice–Sea Model (RAISE v1.0): a high-resolution ocean–sea ice–ice shelf coupling model for simulating the Dense Shelf Water and Antarctic Bottom Water in the Ross Sea, Antarctica
Sensitivity of the tropical Atlantic to vertical mixing in two ocean models (ICON-O v2.6.6 and FESOM v2.5)
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HOTSSea v1: a NEMO-based physical Hindcast of the Salish Sea (1980–2018) supporting ecosystem model development
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ISWFM-NSCS v2.0: advancing the internal solitary wave forecasting model with background currents and horizontally inhomogeneous stratifications
Impacts of CICE sea ice model and ERA atmosphere on an Antarctic MetROMS ocean model, MetROMS-UHel-v1.0
DalROMS-NWA12 v1.0, a coupled circulation–ice–biogeochemistry modelling system for the northwest Atlantic Ocean: development and validation
A revised ocean mixed layer model for better simulating the diurnal variation in ocean skin temperature
Evaluating an accelerated forcing approach for improving computational efficiency in coupled ice sheet–ocean modelling
An optimal transformation method for inferring ocean tracer sources and sinks
Data-driven rolling model for global wave height
PPCon 1.0: Biogeochemical-Argo profile prediction with 1D convolutional networks
Wave forecast investigations on downscaling, source terms, and tides for Aotearoa New Zealand
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Spurious numerical mixing under strong tidal forcing: a case study in the south-east Asian seas using the Symphonie model (v3.1.2)
Modelling the water isotope distribution in the Mediterranean Sea using a high-resolution oceanic model (NEMO-MED12-watiso v1.0): evaluation of model results against in situ observations
LIGHT-bgcArgo-1.0: using synthetic float capabilities in E3SMv2 to assess spatiotemporal variability in ocean physics and biogeochemistry
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Towards a real-time modeling of global ocean waves by the fully GPU-accelerated spectral wave model WAM6-GPU v1.0
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Implementation and assessment of a model including mixotrophs and the carbonate cycle (Eco3M_MIX-CarbOx v1.0) in a highly dynamic Mediterranean coastal environment (Bay of Marseille, France) – Part 2: Towards a better representation of total alkalinity when modeling the carbonate system and air–sea CO2 fluxes
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Geosci. Model Dev., 18, 3487–3507, https://doi.org/10.5194/gmd-18-3487-2025, https://doi.org/10.5194/gmd-18-3487-2025, 2025
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The GREAT v1.0 software introduces a novel tsunami warning technology for global real-time analysis. It leverages acoustic signals generated by tsunamis, which propagate faster than the tsunami itself, enabling real-time detection and assessment. Integrating various models, the software provides reliable and rapid assessment, maps risk areas, and estimates tsunami amplitude. This advancement reduces false alarms and enhances global tsunami warning systems' accuracy and efficiency.
Marina Amadori, Abolfazl Irani Rahaghi, Damien Bouffard, and Marco Toffolon
Geosci. Model Dev., 18, 3473–3486, https://doi.org/10.5194/gmd-18-3473-2025, https://doi.org/10.5194/gmd-18-3473-2025, 2025
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Models simplify reality using assumptions, which can sometimes introduce flaws and affect their accuracy. Properly calibrating model parameters is essential, and although automated tools can speed up this process, they may occasionally produce incorrect values due to inconsistencies in the model. We demonstrate that by carefully applying automated tools, we were able to identify and correct a flaw in a widely used model for lake environments.
Davi Mignac, Jennifer Waters, Daniel J. Lea, Matthew J. Martin, James While, Anthony T. Weaver, Arthur Vidard, Catherine Guiavarc'h, Dave Storkey, David Ford, Edward W. Blockley, Jonathan Baker, Keith Haines, Martin R. Price, Michael J. Bell, and Richard Renshaw
Geosci. Model Dev., 18, 3405–3425, https://doi.org/10.5194/gmd-18-3405-2025, https://doi.org/10.5194/gmd-18-3405-2025, 2025
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We describe major improvements of the Met Office's global ocean–sea ice forecasting system. The models and the way observations are used to improve the forecasts were changed, which led to a significant error reduction of 1 d forecasts. The new system performance in past conditions, where subsurface observations are scarce, was improved with more consistent ocean heat content estimates. The new system will be of better use for climate studies and will provide improved forecasts for end users.
David Storkey, Pierre Mathiot, Michael J. Bell, Dan Copsey, Catherine Guiavarc'h, Helene T. Hewitt, Jeff Ridley, and Malcolm J. Roberts
Geosci. Model Dev., 18, 2725–2745, https://doi.org/10.5194/gmd-18-2725-2025, https://doi.org/10.5194/gmd-18-2725-2025, 2025
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The Southern Ocean is a key region of the world ocean in the context of climate change studies. We show that the Met Office Hadley Centre coupled model with intermediate ocean resolution struggles to accurately simulate the Southern Ocean. Increasing the frictional drag that the seafloor exerts on ocean currents and introducing a representation of unresolved ocean eddies both appear to reduce the large-scale biases in this model.
Axelle Gaffet, Xavier Bertin, Damien Sous, Héloïse Michaud, Aron Roland, and Emmanuel Cordier
Geosci. Model Dev., 18, 1929–1946, https://doi.org/10.5194/gmd-18-1929-2025, https://doi.org/10.5194/gmd-18-1929-2025, 2025
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This study presents a new global wave model that improves predictions of sea states in tropical areas by using a high-resolution grid and corrected wind fields. The model is validated globally with satellite data and nearshore using in situ data. The model allows for the first time direct comparisons with in situ data collected at 10–30 m water depth, which is very close to shore due to the steep slope usually surrounding volcanic islands.
Antoine Mathieu, Yeulwoo Kim, Tian-Jian Hsu, Cyrille Bonamy, and Julien Chauchat
Geosci. Model Dev., 18, 1561–1573, https://doi.org/10.5194/gmd-18-1561-2025, https://doi.org/10.5194/gmd-18-1561-2025, 2025
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Most of the tools available to model sediment transport do not account for complex physical mechanisms such as surface-wave-driven processes. In this study, a new model, sedInterFoam, allows us to reproduce numerically complex configurations in order to investigate coastal sediment transport applications dominated by surface waves and to gain insight into the complex physical processes associated with breaking waves and morphodynamics.
Júlia Crespin, Jordi Solé, and Miquel Canals
EGUsphere, https://doi.org/10.5194/egusphere-2025-865, https://doi.org/10.5194/egusphere-2025-865, 2025
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This study presents the Offline Fennel model, a tool designed to simulate ocean biogeochemical processes efficiently. By using existing hydrodynamic data, the model significantly reduces computation time from 6 hours to just 30 minutes. We tested its accuracy in the Northern Gulf of Mexico and found it closely matches physical-biogeochemical coupled simulations. This model allows researchers to conduct more tests and simulations without the need for extensive computational resources.
Zhaoru Zhang, Chuan Xie, Chuning Wang, Yuanjie Chen, Heng Hu, and Xiaoqiao Wang
Geosci. Model Dev., 18, 1375–1393, https://doi.org/10.5194/gmd-18-1375-2025, https://doi.org/10.5194/gmd-18-1375-2025, 2025
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A coupled fine-resolution ocean–ice model is developed for the Ross Sea and adjacent regions in Antarctica, a key area for the formation of global ocean bottom water, the Antarctic Bottom Water (AABW), which affects global ocean circulation. The model has a high skill level in simulating sea ice production driving the AABW source water formation and AABW properties when assessed against observations. A model experiment shows a significant impact of ice shelf melting on the AABW characteristics.
Swantje Bastin, Aleksei Koldunov, Florian Schütte, Oliver Gutjahr, Marta Agnieszka Mrozowska, Tim Fischer, Radomyra Shevchenko, Arjun Kumar, Nikolay Koldunov, Helmuth Haak, Nils Brüggemann, Rebecca Hummels, Mia Sophie Specht, Johann Jungclaus, Sergey Danilov, Marcus Dengler, and Markus Jochum
Geosci. Model Dev., 18, 1189–1220, https://doi.org/10.5194/gmd-18-1189-2025, https://doi.org/10.5194/gmd-18-1189-2025, 2025
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Vertical mixing is an important process, for example, for tropical sea surface temperature, but cannot be resolved by ocean models. Comparisons of mixing schemes and settings have usually been done with a single model, sometimes yielding conflicting results. We systematically compare two widely used schemes with different parameter settings in two different ocean models and show that most effects from mixing scheme parameter changes are model-dependent.
Matjaž Zupančič Muc, Vitjan Zavrtanik, Alexander Barth, Aida Alvera-Azcarate, Matjaž Ličer, and Matej Kristan
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-208, https://doi.org/10.5194/gmd-2024-208, 2025
Revised manuscript accepted for GMD
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Accurate sea surface temperature data (SST) is crucial for weather forecasting and climate modeling, but satellite observations are often incomplete. We developed a new method called CRITER, which uses machine learning to fill in the gaps in SST data. Our two-stage approach reconstructs large-scale patterns and refines details. Tested on Mediterranean, Adriatic, and Atlantic seas data, CRITER outperforms current methods, reducing errors by up to 44 %.
Marko Rus, Hrvoje Mihanović, Matjaž Ličer, and Matej Kristan
Geosci. Model Dev., 18, 605–620, https://doi.org/10.5194/gmd-18-605-2025, https://doi.org/10.5194/gmd-18-605-2025, 2025
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HIDRA3 is a deep-learning model for predicting sea levels and storm surges, offering significant improvements over previous models and numerical simulations. It utilizes data from multiple tide gauges, enhancing predictions even with limited historical data and during sensor outages. With its advanced architecture, HIDRA3 outperforms current state-of-the-art models by achieving a mean absolute error of up to 15 % lower, proving effective for coastal flood forecasting under diverse conditions.
Isabel Jalón-Rojas, Damien Sous, and Vincent Marieu
Geosci. Model Dev., 18, 319–336, https://doi.org/10.5194/gmd-18-319-2025, https://doi.org/10.5194/gmd-18-319-2025, 2025
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This study presents a novel modeling approach for understanding microplastic transport in coastal waters. The model accurately replicates experimental data and reveals key transport mechanisms. The findings enhance our knowledge of how microplastics move in nearshore environments, aiding in coastal management and efforts to combat plastic pollution globally.
Greig Oldford, Tereza Jarníková, Villy Christensen, and Michael Dunphy
Geosci. Model Dev., 18, 211–237, https://doi.org/10.5194/gmd-18-211-2025, https://doi.org/10.5194/gmd-18-211-2025, 2025
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We developed a 3D ocean model called the Hindcast of the Salish Sea (HOTSSea v1) that recreates physical conditions throughout the Salish Sea from 1980 to 2018. It was not clear that acceptable accuracy could be achieved because of computational and data limitations, but the model's predictions agreed well with observations. When we used the model to examine ocean temperature trends in areas that lack observations, it indicated that some seasons and areas are warming faster than others.
Sofia Flora, Laura Ursella, and Achim Wirth
EGUsphere, https://doi.org/10.5194/egusphere-2024-3391, https://doi.org/10.5194/egusphere-2024-3391, 2025
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We developed a hierarchy of idealized deterministic-stochastic models to simulate the sea surface currents in the Gulf of Trieste. They include tide-and-wind driven sea surface current components, resolving the slowly varying part of the flow and a stochastic signal, representing the fast-varying small-scale dynamics. The comparison with High Frequency Radar observations shows that the non-Gaussian stochastic model captures the essential dynamics and permits to mimic the observed fat-tailed PDF.
Yankun Gong, Xueen Chen, Jiexin Xu, Zhiwu Chen, Qingyou He, Ruixiang Zhao, Xiao-Hua Zhu, and Shuqun Cai
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-165, https://doi.org/10.5194/gmd-2024-165, 2024
Revised manuscript accepted for GMD
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A new internal solitary wave forecasting (ISW) model in the northern South China Sea (ISWFM-NSCS v2.0) improves ISW predictions by incorporating background currents and inhomogeneous stratifications. Additionally, viscosity and diffusivity coefficients are optimized to maintain stable stratifications, extending the forecasting period. Sensitivity experiments illustrate that ISWFM-NSCS v2.0 significantly enhances predictions of various wave properties.
Cecilia Äijälä, Yafei Nie, Lucía Gutiérrez-Loza, Chiara De Falco, Siv Kari Lauvset, Bin Cheng, David A. Bailey, and Petteri Uotila
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-213, https://doi.org/10.5194/gmd-2024-213, 2024
Revised manuscript accepted for GMD
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The sea ice around Antarctica has experienced record lows in recent years. To understand these changes, models are needed. MetROMS-UHel is a new version of an ocean–sea ice model with updated sea ice code and the atmospheric data. We investigate the effect of our updates on different variables with a focus on sea ice and show an improved sea ice representation as compared with observations.
Kyoko Ohashi, Arnaud Laurent, Christoph Renkl, Jinyu Sheng, Katja Fennel, and Eric Oliver
Geosci. Model Dev., 17, 8697–8733, https://doi.org/10.5194/gmd-17-8697-2024, https://doi.org/10.5194/gmd-17-8697-2024, 2024
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We developed a modelling system of the northwest Atlantic Ocean that simulates the currents, temperature, salinity, and parts of the biochemical cycle of the ocean, as well as sea ice. The system combines advanced, open-source models and can be used to study, for example, the ocean capture of atmospheric carbon dioxide, which is a key process in the global climate. The system produces realistic results, and we use it to investigate the roles of tides and sea ice in the northwest Atlantic Ocean.
Eui-Jong Kang, Byung-Ju Sohn, Sang-Woo Kim, Wonho Kim, Young-Cheol Kwon, Seung-Bum Kim, Hyoung-Wook Chun, and Chao Liu
Geosci. Model Dev., 17, 8553–8568, https://doi.org/10.5194/gmd-17-8553-2024, https://doi.org/10.5194/gmd-17-8553-2024, 2024
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Sea surface temperature (SST) is vital in climate, weather, and ocean sciences because it influences air–sea interactions. Errors in the ECMWF model's scheme for predicting ocean skin temperature prompted a revision of the ocean mixed layer model. Validation against infrared measurements and buoys showed a good correlation with minimal deviations. The revised model accurately simulates SST variations and aligns with solar radiation distributions, showing promise for weather and climate models.
Qin Zhou, Chen Zhao, Rupert Gladstone, Tore Hattermann, David Gwyther, and Benjamin Galton-Fenzi
Geosci. Model Dev., 17, 8243–8265, https://doi.org/10.5194/gmd-17-8243-2024, https://doi.org/10.5194/gmd-17-8243-2024, 2024
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We introduce an accelerated forcing approach to address timescale discrepancies between the ice sheets and ocean components in coupled modelling by reducing the ocean simulation duration. The approach is evaluated using idealized coupled models, and its limitations in real-world applications are discussed. Our results suggest it can be a valuable tool for process-oriented coupled ice sheet–ocean modelling and downscaling climate simulations with such models.
Jan D. Zika and Taimoor Sohail
Geosci. Model Dev., 17, 8049–8068, https://doi.org/10.5194/gmd-17-8049-2024, https://doi.org/10.5194/gmd-17-8049-2024, 2024
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We describe a method to relate fluxes of heat and freshwater at the sea surface to the resulting distribution of seawater among categories such as warm and salty or cold and salty. The method exploits the laws that govern how heat and salt change when water mixes. The method will allow the climate community to improve estimates of how much heat the ocean is absorbing and how rainfall and evaporation are changing across the globe.
Xinxin Wang, Jiuke Wang, Wenfang Lu, Changming Dong, Hao Qin, and Haoyu Jiang
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-181, https://doi.org/10.5194/gmd-2024-181, 2024
Revised manuscript accepted for GMD
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Large-scale wave modeling is essential for science and society, typically relying on resource-intensive numerical methods to simulate wave dynamics. In this study, we introduce a rolling AI-based method for modeling global significant wave height. Our model achieves accuracy comparable to traditional numerical methods while significantly improving speed, making it operable on standard laptops. This work demonstrates AI's potential to enhance the accuracy and efficiency of global wave modeling.
Gloria Pietropolli, Luca Manzoni, and Gianpiero Cossarini
Geosci. Model Dev., 17, 7347–7364, https://doi.org/10.5194/gmd-17-7347-2024, https://doi.org/10.5194/gmd-17-7347-2024, 2024
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Monitoring the ocean is essential for studying marine life and human impact. Our new software, PPCon, uses ocean data to predict key factors like nitrate and chlorophyll levels, which are hard to measure directly. By leveraging machine learning, PPCon offers more accurate and efficient predictions.
Rafael Santana, Richard Gorman, Emily Lane, Stuart Moore, Cyprien Bosserelle, Glen Reeve, and Christo Rautenbach
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-110, https://doi.org/10.5194/gmd-2024-110, 2024
Revised manuscript accepted for GMD
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This research explores improving wave forecasts in New Zealand, particularly at Banks Peninsula and Baring Head. We used detailed models, finding that forecasts at Baring Head improved significantly due to its strong tidal currents, but changes at Banks Peninsula were minimal. The study demonstrates that local conditions greatly influence the effectiveness of wave prediction models, highlighting the need for tailored approaches in coastal forecasting to enhance accuracy in the predictions.
Renbo Pang, Fujiang Yu, Yuanyong Gao, Ye Yuan, Liang Yuan, and Zhiyi Gao
EGUsphere, https://doi.org/10.5194/egusphere-2024-2515, https://doi.org/10.5194/egusphere-2024-2515, 2024
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The application of the distributed graph communication topology in earth models has been rarely studied. We tested and compared this topology with the traditional point-to-point communication method using a global wave model. We found that this topology is more efficient. Additionally, using this topology can greatly improve the performance of the wave model and could help improve the performance of other earth models.
Jan De Rydt, Nicolas C. Jourdain, Yoshihiro Nakayama, Mathias van Caspel, Ralph Timmermann, Pierre Mathiot, Xylar S. Asay-Davis, Hélène Seroussi, Pierre Dutrieux, Ben Galton-Fenzi, David Holland, and Ronja Reese
Geosci. Model Dev., 17, 7105–7139, https://doi.org/10.5194/gmd-17-7105-2024, https://doi.org/10.5194/gmd-17-7105-2024, 2024
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Global climate models do not reliably simulate sea-level change due to ice-sheet–ocean interactions. We propose a community modelling effort to conduct a series of well-defined experiments to compare models with observations and study how models respond to a range of perturbations in climate and ice-sheet geometry. The second Marine Ice Sheet–Ocean Model Intercomparison Project will continue to lay the groundwork for including ice-sheet–ocean interactions in global-scale IPCC-class models.
Qian Wang, Yang Zhang, Fei Chai, Y. Joseph Zhang, and Lorenzo Zampieri
Geosci. Model Dev., 17, 7067–7081, https://doi.org/10.5194/gmd-17-7067-2024, https://doi.org/10.5194/gmd-17-7067-2024, 2024
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We coupled an unstructured hydro-model with an advanced column sea ice model to meet the growing demand for increased resolution and complexity in unstructured sea ice models. Additionally, we present a novel tracer transport scheme for the sea ice coupled model and demonstrate that this scheme fulfills the requirements for conservation, accuracy, efficiency, and monotonicity in an idealized test. Our new coupled model also has good performance in realistic tests.
Adrien Garinet, Marine Herrmann, Patrick Marsaleix, and Juliette Pénicaud
Geosci. Model Dev., 17, 6967–6986, https://doi.org/10.5194/gmd-17-6967-2024, https://doi.org/10.5194/gmd-17-6967-2024, 2024
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Mixing is a crucial aspect of the ocean, but its accurate representation in computer simulations is made challenging by errors that result in unwanted mixing, compromising simulation realism. Here we illustrate the spurious effect that tides can have on simulations of south-east Asia. Although they play an important role in determining the state of the ocean, they can increase numerical errors and make simulation outputs less realistic. We also provide insights into how to reduce these errors.
Mohamed Ayache, Jean-Claude Dutay, Anne Mouchet, Kazuyo Tachikawa, Camille Risi, and Gilles Ramstein
Geosci. Model Dev., 17, 6627–6655, https://doi.org/10.5194/gmd-17-6627-2024, https://doi.org/10.5194/gmd-17-6627-2024, 2024
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Water isotopes (δ18O, δD) are one of the most widely used proxies in ocean climate research. Previous studies using water isotope observations and modelling have highlighted the importance of understanding spatial and temporal isotopic variability for a quantitative interpretation of these tracers. Here we present the first results of a high-resolution regional dynamical model (at 1/12° horizontal resolution) developed for the Mediterranean Sea, one of the hotspots of ongoing climate change.
Cara Nissen, Nicole S. Lovenduski, Mathew Maltrud, Alison R. Gray, Yohei Takano, Kristen Falcinelli, Jade Sauvé, and Katherine Smith
Geosci. Model Dev., 17, 6415–6435, https://doi.org/10.5194/gmd-17-6415-2024, https://doi.org/10.5194/gmd-17-6415-2024, 2024
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Autonomous profiling floats have provided unprecedented observational coverage of the global ocean, but uncertainties remain about whether their sampling frequency and density capture the true spatiotemporal variability of physical, biogeochemical, and biological properties. Here, we present the novel synthetic biogeochemical float capabilities of the Energy Exascale Earth System Model version 2 and demonstrate their utility as a test bed to address these uncertainties.
Iria Sala and Bingzhang Chen
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-130, https://doi.org/10.5194/gmd-2024-130, 2024
Revised manuscript accepted for GMD
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Phytoplankton, tiny photosynthetic organisms, produce nearly half of Earth's oxygen. To analyze their physiology, diversity, and evolution in the ocean, we developed a model that treats phytoplankton as individual particles. Moreover, our model considers phytoplankton size, temperature, and light traits, and allows for mutations in phytoplankton cells. Thus, our model provides a valuable tool for advancing the study of phytoplankton physiology, diversity, and evolution.
Ye Yuan, Fujiang Yu, Zhi Chen, Xueding Li, Fang Hou, Yuanyong Gao, Zhiyi Gao, and Renbo Pang
Geosci. Model Dev., 17, 6123–6136, https://doi.org/10.5194/gmd-17-6123-2024, https://doi.org/10.5194/gmd-17-6123-2024, 2024
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Accurate and timely forecasting of ocean waves is of great importance to the safety of marine transportation and offshore engineering. In this study, GPU-accelerated computing is introduced in WAve Modeling Cycle 6 (WAM6). With this effort, global high-resolution wave simulations can now run on GPUs up to tens of times faster than the currently available models can on a CPU node with results that are just as accurate.
Krysten Rutherford, Laura Bianucci, and William Floyd
Geosci. Model Dev., 17, 6083–6104, https://doi.org/10.5194/gmd-17-6083-2024, https://doi.org/10.5194/gmd-17-6083-2024, 2024
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Nearshore ocean models often lack complete information about freshwater fluxes due to numerous ungauged rivers and streams. We tested a simple rain-based hydrological model as inputs into an ocean model of Quatsino Sound, Canada, with the aim of improving the representation of the land–ocean connection in the nearshore model. Through multiple tests, we found that the performance of the ocean model improved when providing 60 % or more of the freshwater inputs from the simple runoff model.
Neill Mackay, Taimoor Sohail, Jan David Zika, Richard G. Williams, Oliver Andrews, and Andrew James Watson
Geosci. Model Dev., 17, 5987–6005, https://doi.org/10.5194/gmd-17-5987-2024, https://doi.org/10.5194/gmd-17-5987-2024, 2024
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The ocean absorbs carbon dioxide from the atmosphere, mitigating climate change, but estimates of the uptake do not always agree. There is a need to reconcile these differing estimates and to improve our understanding of ocean carbon uptake. We present a new method for estimating ocean carbon uptake and test it with model data. The method effectively diagnoses the ocean carbon uptake from limited data and therefore shows promise for reconciling different observational estimates.
Lucille Barré, Frédéric Diaz, Thibaut Wagener, Camille Mazoyer, Christophe Yohia, and Christel Pinazo
Geosci. Model Dev., 17, 5851–5882, https://doi.org/10.5194/gmd-17-5851-2024, https://doi.org/10.5194/gmd-17-5851-2024, 2024
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The carbonate system is typically studied using measurements, but modeling can contribute valuable insights. Using a biogeochemical model, we propose a new representation of total alkalinity, dissolved inorganic carbon, pCO2, and pH in a highly dynamic Mediterranean coastal area, the Bay of Marseille, a useful addition to measurements. Through a detailed analysis of pCO2 and air–sea CO2 fluxes, we show that variations are strongly impacted by the hydrodynamic processes that affect the bay.
Xuanxuan Gao, Shuiqing Li, Dongxue Mo, Yahao Liu, and Po Hu
Geosci. Model Dev., 17, 5497–5509, https://doi.org/10.5194/gmd-17-5497-2024, https://doi.org/10.5194/gmd-17-5497-2024, 2024
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Storm surges generate coastal inundation and expose populations and properties to danger. We developed a novel storm surge inundation model for efficient prediction. Estimates compare well with in situ measurements and results from a numerical model. The new model is a significant improvement on existing numerical models, with much higher computational efficiency and stability, which allows timely disaster prevention and mitigation.
Vincenzo de Toma, Daniele Ciani, Yassmin Hesham Essa, Chunxue Yang, Vincenzo Artale, Andrea Pisano, Davide Cavaliere, Rosalia Santoleri, and Andrea Storto
Geosci. Model Dev., 17, 5145–5165, https://doi.org/10.5194/gmd-17-5145-2024, https://doi.org/10.5194/gmd-17-5145-2024, 2024
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This study explores methods to reconstruct diurnal variations in skin sea surface temperature in a model of the Mediterranean Sea. Our new approach, considering chlorophyll concentration, enhances spatial and temporal variations in the warm layer. Comparative analysis shows context-dependent improvements. The proposed "chlorophyll-interactive" method brings the surface net total heat flux closer to zero annually, despite a net heat loss from the ocean to the atmosphere.
Peter Mlakar, Antonio Ricchi, Sandro Carniel, Davide Bonaldo, and Matjaž Ličer
Geosci. Model Dev., 17, 4705–4725, https://doi.org/10.5194/gmd-17-4705-2024, https://doi.org/10.5194/gmd-17-4705-2024, 2024
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We propose a new point-prediction model, the DEep Learning WAVe Emulating model (DELWAVE), which successfully emulates the Simulating WAves Nearshore model (SWAN) over synoptic to climate timescales. Compared to control climatology over all wind directions, the mismatch between DELWAVE and SWAN is generally small compared to the difference between scenario and control conditions, suggesting that the noise introduced by surrogate modelling is substantially weaker than the climate change signal.
Susanna Winkelbauer, Michael Mayer, and Leopold Haimberger
Geosci. Model Dev., 17, 4603–4620, https://doi.org/10.5194/gmd-17-4603-2024, https://doi.org/10.5194/gmd-17-4603-2024, 2024
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Oceanic transports shape the global climate, but the evaluation and validation of this key quantity based on reanalysis and model data are complicated by the distortion of the used modelling grids and the large number of different grid types. We present two new methods that allow the calculation of oceanic fluxes of volume, heat, salinity, and ice through almost arbitrary sections for various models and reanalyses that are independent of the used modelling grids.
Xiaoyu Fan, Baylor Fox-Kemper, Nobuhiro Suzuki, Qing Li, Patrick Marchesiello, Peter P. Sullivan, and Paul S. Hall
Geosci. Model Dev., 17, 4095–4113, https://doi.org/10.5194/gmd-17-4095-2024, https://doi.org/10.5194/gmd-17-4095-2024, 2024
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Simulations of the oceanic turbulent boundary layer using the nonhydrostatic CROCO ROMS and NCAR-LES models are compared. CROCO and the NCAR-LES are accurate in a similar manner, but CROCO’s additional features (e.g., nesting and realism) and its compressible turbulence formulation carry additional costs.
Jilian Xiong and Parker MacCready
Geosci. Model Dev., 17, 3341–3356, https://doi.org/10.5194/gmd-17-3341-2024, https://doi.org/10.5194/gmd-17-3341-2024, 2024
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The new offline particle tracking package, Tracker v1.1, is introduced to the Regional Ocean Modeling System, featuring an efficient nearest-neighbor algorithm to enhance particle-tracking speed. Its performance was evaluated against four other tracking packages and passive dye. Despite unique features, all packages yield comparable results. Running multiple packages within the same circulation model allows comparison of their performance and ease of use.
Sylvain Cailleau, Laurent Bessières, Léonel Chiendje, Flavie Dubost, Guillaume Reffray, Jean-Michel Lellouche, Simon van Gennip, Charly Régnier, Marie Drevillon, Marc Tressol, Matthieu Clavier, Julien Temple-Boyer, and Léo Berline
Geosci. Model Dev., 17, 3157–3173, https://doi.org/10.5194/gmd-17-3157-2024, https://doi.org/10.5194/gmd-17-3157-2024, 2024
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In order to improve Sargassum drift forecasting in the Caribbean area, drift models can be forced by higher-resolution ocean currents. To this goal a 3 km resolution regional ocean model has been developed. Its assessment is presented with a particular focus on the reproduction of fine structures representing key features of the Caribbean region dynamics and Sargassum transport. The simulated propagation of a North Brazil Current eddy and its dissipation was found to be quite realistic.
Gaetano Porcile, Anne-Claire Bennis, Martial Boutet, Sophie Le Bot, Franck Dumas, and Swen Jullien
Geosci. Model Dev., 17, 2829–2853, https://doi.org/10.5194/gmd-17-2829-2024, https://doi.org/10.5194/gmd-17-2829-2024, 2024
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Here a new method of modelling the interaction between ocean currents and waves is presented. We developed an advanced coupling of two models, one for ocean currents and one for waves. In previous couplings, some wave-related calculations were based on simplified assumptions. Our method uses more complex calculations to better represent wave–current interactions. We tested it in a macro-tidal coastal area and found that it significantly improves the model accuracy, especially during storms.
Colette Gabrielle Kerry, Moninya Roughan, Shane Keating, David Gwyther, Gary Brassington, Adil Siripatana, and Joao Marcos A. C. Souza
Geosci. Model Dev., 17, 2359–2386, https://doi.org/10.5194/gmd-17-2359-2024, https://doi.org/10.5194/gmd-17-2359-2024, 2024
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Ocean forecasting relies on the combination of numerical models and ocean observations through data assimilation (DA). Here we assess the performance of two DA systems in a dynamic western boundary current, the East Australian Current, across a common modelling and observational framework. We show that the more advanced, time-dependent method outperforms the time-independent method for forecast horizons of 5 d. This advocates the use of advanced methods for highly variable oceanic regions.
Ivan Hernandez, Leidy M. Castro-Rosero, Manuel Espino, and Jose M. Alsina Torrent
Geosci. Model Dev., 17, 2221–2245, https://doi.org/10.5194/gmd-17-2221-2024, https://doi.org/10.5194/gmd-17-2221-2024, 2024
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The LOCATE numerical model was developed to conduct Lagrangian simulations of the transport and dispersion of marine debris at coastal scales. High-resolution hydrodynamic data and a beaching module that used particle distance to the shore for land–water boundary detection were used on a realistic debris discharge scenario comparing hydrodynamic data at various resolutions. Coastal processes and complex geometric structures were resolved when using nested grids and distance-to-shore beaching.
Ngoc B. Trinh, Marine Herrmann, Caroline Ulses, Patrick Marsaleix, Thomas Duhaut, Thai To Duy, Claude Estournel, and R. Kipp Shearman
Geosci. Model Dev., 17, 1831–1867, https://doi.org/10.5194/gmd-17-1831-2024, https://doi.org/10.5194/gmd-17-1831-2024, 2024
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A high-resolution model was built to study the South China Sea (SCS) water, heat, and salt budgets. Model performance is demonstrated by comparison with observations and simulations. Important discards are observed if calculating offline, instead of online, lateral inflows and outflows of water, heat, and salt. The SCS mainly receives water from the Luzon Strait and releases it through the Mindoro, Taiwan, and Karimata straits. SCS surface interocean water exchanges are driven by monsoon winds.
Louis Thiry, Long Li, Guillaume Roullet, and Etienne Mémin
Geosci. Model Dev., 17, 1749–1764, https://doi.org/10.5194/gmd-17-1749-2024, https://doi.org/10.5194/gmd-17-1749-2024, 2024
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We present a new way of solving the quasi-geostrophic (QG) equations, a simple set of equations describing ocean dynamics. Our method is solely based on the numerical methods used to solve the equations and requires no parameter tuning. Moreover, it can handle non-rectangular geometries, opening the way to study QG equations on realistic domains. We release a PyTorch implementation to ease future machine-learning developments on top of the presented method.
Zheqi Shen, Yihao Chen, Xiaojing Li, and Xunshu Song
Geosci. Model Dev., 17, 1651–1665, https://doi.org/10.5194/gmd-17-1651-2024, https://doi.org/10.5194/gmd-17-1651-2024, 2024
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Parameter estimation is the process that optimizes model parameters using observations, which could reduce model errors and improve forecasting. In this study, we conducted parameter estimation experiments using the CESM and the ensemble adjustment Kalman filter. The obtained initial conditions and parameters are used to perform ensemble forecast experiments for ENSO forecasting. The results revealed that parameter estimation could reduce analysis errors and improve ENSO forecast skills.
Ali Abdolali, Saeideh Banihashemi, Jose Henrique Alves, Aron Roland, Tyler J. Hesser, Mary Anderson Bryant, and Jane McKee Smith
Geosci. Model Dev., 17, 1023–1039, https://doi.org/10.5194/gmd-17-1023-2024, https://doi.org/10.5194/gmd-17-1023-2024, 2024
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This article presents an overview of the development and implementation of Great Lake Wave Unstructured (GLWUv2.0), including the core model and workflow design and development. The validation was conducted against in situ data for the re-forecasted duration for summer and wintertime (ice season). The article describes the limitations and challenges encountered in the operational environment and the path forward for the next generation of wave forecast systems in enclosed basins like the GL.
Qiang Wang, Qi Shu, Alexandra Bozec, Eric P. Chassignet, Pier Giuseppe Fogli, Baylor Fox-Kemper, Andy McC. Hogg, Doroteaciro Iovino, Andrew E. Kiss, Nikolay Koldunov, Julien Le Sommer, Yiwen Li, Pengfei Lin, Hailong Liu, Igor Polyakov, Patrick Scholz, Dmitry Sidorenko, Shizhu Wang, and Xiaobiao Xu
Geosci. Model Dev., 17, 347–379, https://doi.org/10.5194/gmd-17-347-2024, https://doi.org/10.5194/gmd-17-347-2024, 2024
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Increasing resolution improves model skills in simulating the Arctic Ocean, but other factors such as parameterizations and numerics are at least of the same importance for obtaining reliable simulations.
Andrew C. Ross, Charles A. Stock, Alistair Adcroft, Enrique Curchitser, Robert Hallberg, Matthew J. Harrison, Katherine Hedstrom, Niki Zadeh, Michael Alexander, Wenhao Chen, Elizabeth J. Drenkard, Hubert du Pontavice, Raphael Dussin, Fabian Gomez, Jasmin G. John, Dujuan Kang, Diane Lavoie, Laure Resplandy, Alizée Roobaert, Vincent Saba, Sang-Ik Shin, Samantha Siedlecki, and James Simkins
Geosci. Model Dev., 16, 6943–6985, https://doi.org/10.5194/gmd-16-6943-2023, https://doi.org/10.5194/gmd-16-6943-2023, 2023
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We evaluate a model for northwest Atlantic Ocean dynamics and biogeochemistry that balances high resolution with computational economy by building on the new regional features in the MOM6 ocean model and COBALT biogeochemical model. We test the model's ability to simulate impactful historical variability and find that the model simulates the mean state and variability of most features well, which suggests the model can provide information to inform living-marine-resource applications.
Cited articles
Amante, C. and Eakins, B. W.: ETOPO1 1 Arc-Minute Global Relief Model:
Procedures, Data Sources and Analysis, NOAA Tech. Memo., NESDIS NGDC-24,
https://doi.org/10.1594/PANGAEA.769615, 2009.
Australian Institute of Marine Science (AIMS): NRSYON: Northern Australia Automated Marine Weather and Oceanographic Stations, Sites: [Yongala], https://doi.org/10.25845/5c09bf93f315d, 2020.
Bahamondes Dominguez, A. A., Hickman, A. E., Marsh, R., and Moore, C. M.: Constraining the response of phytoplankton to zooplankton grazing and photo-acclimation in a temperate shelf sea with a 1-D model – towards S2P3 v8.0, Geosci. Model Dev., 13, 4019–4040, https://doi.org/10.5194/gmd-13-4019-2020, 2020.
Barnes, M. K., Tilstone, G. H., Suggett, D. J., Widdicombe, C. E., Bruun,
J., Martinez-Vicente, V., and Smyth, T. J.: Temporal variability in total,
micro- and nano-phytoplankton primary production at a coastal site in the
Western English Channel, Prog. Oceanogr., 137 (Part B), 470–483,
https://doi.org/10.1016/j.pocean.2015.04.017, 2015.
Beaman, R.: Project 3DGBR: a high-resolution depth model for the Great
Barrier Reef and Coral Sea, MTSRF Final Report Project 2.5i.1a, Reef and Rainforest Research Centre MTSRF Final Report Marine and Tropical Sciences Research Facility, James Cook University, available at: https://www.deepreef.org/images/stories/publications/reports/Project3DGBRFinal_RRRC2010.pdf (last access: 1 July 2021), 2010.
Booth, B. B. B., Dunstone, N. J., Halloran, P. R., Andrews, T., and
Bellouin, N.: Erratum: Aerosols implicated as a prime driver of
twentieth-century North Atlantic climate variability, Nature, 484,
228–232, https://doi.org/10.1038/nature11138, 2012.
Bowen, B. W., Gaither, M. R., DiBattista, J. D., Iacchei, M., Andrews, K.
R., Grant, W. S., Toonen, R. J., and Briggs, J. C.: Comparative
phylogeography of the ocean planet, P. Natl. Acad. Sci. USA, 113, 7962–7969,
https://doi.org/10.1073/pnas.1602404113, 2016.
Canuto, V. M., Howard, A., Cheng, Y., and Dubovikov, M. S.: Ocean
turbulence. Part I: One-point closure model-momentum and heat vertical
diffusivities, J. Phys. Oceanogr., 31, 1413–1426,
https://doi.org/10.1175/1520-0485(2001)031<1413:OTPIOP>2.0.CO;2, 2001.
Capuzzo, E., Lynam, C. P., Barry, J., Stephens, D., Forster, R. M.,
Greenwood, N., McQuatters-Gollop, A., Silva, T., van Leeuwen, S. M., and
Engelhard, G. H.: A decline in primary production in the North Sea over 25
years, associated with reductions in zooplankton abundance and fish stock
recruitment, Glob. Chang. Biol., 24, e352–e364, https://doi.org/10.1111/gcb.13916, 2018.
Chen, T., Rossow, W. B., and Zhang, Y.: Radiative effects of cloud-type
variations, J. Climate, 13, 264–286, https://doi.org/10.1175/1520-0442(2000)013<0264:REOCTV>2.0.CO;2, 2000.
Chiswell, S. M.: Annual cycles and spring blooms in phytoplankton: Don't
abandon Sverdrup completely, Mar. Ecol. Prog. Ser., 443, 39–50,
https://doi.org/10.3354/meps09453, 2011.
Chiswell, S. M., Calil, P. H. R., and Boyd, P. W.: Spring blooms and annual
cycles of phytoplankton: A unified perspective, J. Plankton Res., 37, 500–508,
https://doi.org/10.1093/plankt/fbv021, 2015.
Darecki, M. and Stramski, D.: An evaluation of MODIS and SeaWiFS bio-optical
algorithms in the Baltic Sea, Remote Sens. Environ., 89, 326–350,
https://doi.org/10.1016/j.rse.2003.10.012, 2004.
Doney, S. C.: The Growing Human Footprint on Coastal and Open-Ocean Biogeochemistry, Science, 328, 1512–1516, https://doi.org/10.1126/science.1185198, 2010.
Donner, S. D., Skirving, W. J., Little, C. M., Oppenheimer, M., and
Hoegh-Gulberg, O.: Global assessment of coral bleaching and required rates
of adaptation under climate change, Glob. Chang. Biol., 11, 2251–2265,
https://doi.org/10.1111/j.1365-2486.2005.01073.x, 2005.
Dooley, H. D.: Hypotheses concerning the circulation of the northern North
Sea, ICES J. Mar. Sci., 36, 54–61, https://doi.org/10.1093/icesjms/36.1.54, 1974.
Egbert, G. D. and Erofeeva, S. Y.: Efficient inverse modeling of barotropic
ocean tides, J. Atmos. Ocean. Technol., 19, 183–204,
https://doi.org/10.1175/1520-0426(2002)019<0183:EIMOBO>2.0.CO;2, 2002.
Findlay, H. S., Yool, A., Nodale, M., and Pitchford, J. W.: Modelling of
autumn plankton bloom dynamics, J. Plankton Res., 28, 209–220,
https://doi.org/10.1093/plankt/fbi114, 2006.
Furnas, M. J. and Mitchell, A. W.: Phytoplankton dynamics in the central
Great Barrier Reef-I. Seasonal changes in biomass and community structure
and their relation to intrusive activity, Cont. Shelf Res., 6, 363–384,
https://doi.org/10.1016/0278-4343(86)90078-6, 1986.
Good, S. A., Martin, M. J., and Rayner, N. A.: EN4: Quality controlled ocean
temperature and salinity profiles and monthly objective analyses with
uncertainty estimates, J. Geophys. Res. Ocean., 118, 6704–6716,
https://doi.org/10.1002/2013JC009067, 2013.
Graham, J. A., O'Dea, E., Holt, J., Polton, J., Hewitt, H. T., Furner, R., Guihou, K., Brereton, A., Arnold, A., Wakelin, S., Castillo Sanchez, J. M., and Mayorga Adame, C. G.: AMM15: a new high-resolution NEMO configuration for operational simulation of the European north-west shelf, Geosci. Model Dev., 11, 681–696, https://doi.org/10.5194/gmd-11-681-2018, 2018.
Halloran, P.: PaulHalloran/S2P3Rv2.0: S2P3-R v2.0: computationally efficient modelling of shelf seas on regional to global scales SUBMISSION (v1.0.1), Zenodo [code], https://doi.org/10.5281/zenodo.4147559, 2020a.
Halloran, P.: S2P3Rv2.0 bias data, Zenodo [data set], https://doi.org/10.5281/zenodo.4018815, 2020b.
Haywood, J. and Boucher, O.: Estimates of the direct and indirect radiative
forcing due to tropospheric aerosols: A review, Rev. Geophys., 38, 513–543,
https://doi.org/10.1029/1999RG000078, 2000.
Hersbach, H., De Rosnay, P., Bell, B., Schepers, D., Simmons, A., Soci, C.,
Abdalla, S., Balmaseda, A., Balsamo, G., Bechtold, P., Berrisford, P.,
Bidlot, J., De Boisséson, E., Bonavita, M., Browne, P., Buizza, R.,
Dahlgren, P., Dee, D., Dragani, R., Diamantakis, M., Flemming, J., Forbes,
R., Geer, A., Haiden, T., Hólm, E., Haimberger, L., Hogan, R.,
Horányi, A., Janisková, M., Laloyaux, P., Lopez, P.,
Muñoz-Sabater, J., Peubey, C., Radu, R., Richardson, D., Thépaut,
J.-N., Vitart, F., Yang, X., Zsótér, E., and Zuo, H.: Operational
global reanalysis: progress, future directions and synergies with NWP
including updates on the ERA5 production status, ERA Rep. Ser., Document Number 27,
https://doi.org/10.21957/tkic6g3wm, 2018.
Hersbach, H., Bell, B., Berrisford, P., Horányi, A., Sabater, J. M.,
Nicolas, J., Radu, R., Schepers, D., Simmons, A., Soci, C., and Dee, D.:
Global reanalysis: goodbye ERA-Interim, hello ERA5, ECMWF Newsl., Newsletter number 159, pp. 17–24,
https://doi.org/10.21957/vf291hehd7, 2019.
Holt, J., Harle, J., Proctor, R., Michel, S., Ashworth, M., Batstone, C.,
Allen, I., Holmes, R., Smyth, T., Haines, K., Bretherton, D., and Smith, G.:
Modelling the global coastal ocean, Philos. Trans. R. Soc. A, 367, 939–951, https://doi.org/10.1098/rsta.2008.0210, 2009.
Holt, J., Butenschön, M., Wakelin, S. L., Artioli, Y., and Allen, J. I.: Oceanic controls on the primary production of the northwest European continental shelf: model experiments under recent past conditions and a potential future scenario, Biogeosciences, 9, 97–117, https://doi.org/10.5194/bg-9-97-2012, 2012.
Integrated Marine Observing System (IMOS): GBRHIS: Heron Island South Shelf Mooring component of the GBR Mooring Array, available at: https://apps.aims.gov.au/metadata/view/9a19eaa5-6069-4ed6-b004-5f7590664881, (last access: 21 September 2021), 2009a.
Integrated Marine Observing System (IMOS): GBRLSH: Lizard Island Shelf Mooring component of the GBR Mooring Array, available at: https://apps.aims.gov.au/metadata/view/ee39900f-141e-43a6-8261-0164267c8f95 (last access: 21 September 2021), 2009b.
Integrated Marine Observing System (IMOS): GBROTE: One Tree Island Shelf Mooring component of the GBR Mooring Array, available at: https://apps.aims.gov.au/metadata/view/05c9319d-ebde-4ba5-8c25-08ea82cbe77f (last access: 21 September 2021), 2009c.
Integrated Marine Observing System (IMOS): GBRPPS: Palm Passage Shelf Mooring component of the GBR Mooring Array, available at: https://apps.aims.gov.au/metadata/view/11c307bd-89bf-4616-b3df-52645ca56b6e (last access: 21 September 2021), 2009d.
Integrated Marine Observing System (IMOS): IMOS – ANMN National Reference Station (NRS) Ningaloo Mooring (NRSNIN), available at: https://apps.aims.gov.au/metadata/view/a581c961-8632-497f-bc5e-2002957577ec (last access: 21 September 2021), 2017.
Integrated Marine Observing System (IMOS): Facility for the Automated
Intelligent Monitoring of Marine Systems – FAIMMS, available at: https://apps.aims.gov.au/metadata/view/d63dc150-0d02-11dd-bbbb-00008a07204e, last access: 1 July 2021.
Kwiatkowski, L., Halloran, P. R., Mumby, P. J., and Stephenson, D. B.: What
spatial scales are believable for climate model projections of sea surface
temperature?, Clim. Dynam., 43, 1483–1496, https://doi.org/10.1007/s00382-013-1967-6,
2014.
Lenhart, H. J., Radach, G., and Ruardij, P.: The effects of river input on
the ecosystem dynamics in the continental coastal zone of the North Sea
using ERSEM, J. Sea Res., 38, 249–274, https://doi.org/10.1016/S1385-1101(97)00049-X,
1997.
Levitus, S.: Climatological Atlas of the World Ocean, EOS, 64, 962–963, https://doi.org/10.1029/EO064i049p00962-02, 1983.
Marsh, R., Hickman, A. E., and Sharples, J.: S2P3-R (v1.0): a framework for efficient regional modelling of physical and biological structures and processes in shelf seas, Geosci. Model Dev., 8, 3163–3178, https://doi.org/10.5194/gmd-8-3163-2015, 2015.
Marsh, R., Haigh, I. D., Cunningham, S. A., Inall, M. E., Porter, M., and Moat, B. I.: Large-scale forcing of the European Slope Current and associated inflows to the North Sea, Ocean Sci., 13, 315–335, https://doi.org/10.5194/os-13-315-2017, 2017.
Merchant, C. J., Embury, O., Bulgin, C. E., Block, T., Corlett, G. K.,
Fiedler, E., Good, S. A., Mittaz, J., Rayner, N. A., Berry, D., Eastwood,
S., Taylor, M., Tsushima, Y., Waterfall, A., Wilson, R., and Donlon, C.:
Satellite-based time-series of sea-surface temperature since 1981 for
climate applications, Sci. data, 6, 223, https://doi.org/10.1038/s41597-019-0236-x,
2019.
Mora, C., Wei, C.-L., Rollo, A., Amaro, T., Baco, A. R., Billett, D., Bopp,
L., Chen, Q., Collier, M., Danovaro, R., Gooday, A. J., Grupe, B. M.,
Halloran, P. R., Ingels, J., Jones, D. O. B., Levin, L. A., Nakano, H.,
Norling, K., Ramirez-Llodra, E., Rex, M., Ruhl, H. A., Smith, C. R.,
Sweetman, A. K., Thurber, A. R., Tjiputra, J. F., Usseglio, P., Watling, L.,
Wu, T., and Yasuhara, M.: Biotic and Human Vulnerability to Projected
Changes in Ocean Biogeochemistry over the 21st Century, PLoS Biol., 11, e1001682,
https://doi.org/10.1371/journal.pbio.1001682, 2013.
Sathyendranath, S., Brewin, R. J. W., Brockmann, C., Brotas, V., Calton, B.,
Chuprin, A., Cipollini, P., Couto, A. B., Dingle, J., Doerffer, R., Donlon,
C., Dowell, M., Farman, A., Grant, M., Groom, S., Horseman, A., Jackson, T.,
Krasemann, H., Lavender, S., Martinez-Vicente, V., Mazeran, C., Mélin,
F., Moore, T. S., Müller, D., Regner, P., Roy, S., Steele, C. J.,
Steinmetz, F., Swinton, J., Taberner, M., Thompson, A., Valente, A.,
Zühlke, M., Brando, V. E., Feng, H., Feldman, G., Franz, B. A., Frouin,
R., Gould, R. W., Hooker, S. B., Kahru, M., Kratzer, S., Mitchell, B. G.,
Muller-Karger, F. E., Sosik, H. M., Voss, K. J., Werdell, J., and Platt, T.:
An ocean-colour time series for use in climate studies: The experience of
the ocean-colour climate change initiative (OC-CCI), Sensors, 19, 4285,
https://doi.org/10.3390/s19194285, 2019.
Sathyendranath, S., Jackson, T., Brockmann, C., Brotas, V., Calton, B.,
Chuprin, A., Clements, O., Cipollini, P., Danne, O., Dingle, J., Donlon, C.,
Grant, M., Groom, S., Krasemann, H., Lavender, S., Mazeran, C., Mélin,
F., Moore, T. S., Müller, D., Regner, P., Steinmetz, F., Steele, C.,
Swinton, J., Valente, A., Zühlke, M., Feldman, G., Franz, B., Frouin,
R., Werdell, J., and Platt, T.: ESA Ocean Colour Climate Change Initiative
(Ocean_Colour_cci): Global chlorophyll-a data
products gridded on a sinusoidal projection, Version 4.2, Cent. Environ.
Data Anal., Centre for Environmental Data Analysis, available at:
https://catalogue.ceda.ac.uk/uuid/99348189bd33459cbd597a58c30d8d10 (last access: 1 August 2021),
2020.
Sharples, J.: Potential impacts of the spring-neap tidal cycle on shelf sea
primary production, J. Plankton Res., 12, S12–S28, https://doi.org/10.1093/plankt/fbm088,
2008.
Sharples, J., Ross, O. N., Scott, B. E., Greenstreet, S. P. R., and Fraser,
H.: Inter-annual variability in the timing of stratification and the spring
bloom in the North-western North Sea, Cont. Shelf Res., 26, 733–751,
https://doi.org/10.1016/j.csr.2006.01.011, 2006.
Sheehan, P. M. F., Berx, B., Gallego, A., Hall, R. A., Heywood, K. J., and
Queste, B. Y.: Weekly variability of hydrography and transport of
northwestern inflows into the northern North Sea, J. Mar. Syst., 204, 103288,
https://doi.org/10.1016/j.jmarsys.2019.103288, 2020.
Simpson, J. H. and Sharples, J.: Introduction to the Physical and Biological
Oceanography of Shelf Seas, Cambridge University Press, https://doi.org/10.1017/cbo9781139034098, 2012.
Sivyer: Cefas SmartBuoy Monitoring Network, Cefas [data set],
https://doi.org/10.14466/CefasDataHub.10, 2016.
Skirving, W., Heron, M., and Heron, S.: The hydrodynamics of a bleaching
event: Implications for management and monitoring, Coral Reefs and Climate Change: Science and Management, 61,
available at: https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1029/61CE09 (last access: 1 July 2021), 2011.
Smith, S. D. and Banke, E. G.: Variation of the sea surface drag coefficient
with wind speed, Q. J. Roy. Meteor. Soc., 101, 665–673,
https://doi.org/10.1002/qj.49710142920, 1975.
Smyth, T., Atkinson, A., Widdicombe, S., Frost, M., Allen, I., Fishwick, J.,
Queiros, A., Sims, D., and Barange, M.: The Western Channel Observatory, 137, 335–341,
https://doi.org/10.1016/j.pocean.2015.05.020, 2015.
Song, H., Ji, R., Stock, C., Kearney, K., and Wang, Z.: Interannual
variability in phytoplankton blooms and plankton productivity over the Nova
Scotian Shelf and in the Gulf of Maine, Mar. Ecol. Prog. Ser., 426, 105–118,
https://doi.org/10.3354/meps09002, 2011.
Steven, A. D. L., Baird, M. E., Brinkman, R., Car, N. J., Cox, S. J.,
Herzfeld, M., Hodge, J., Jones, E., King, E., Margvelashvili, N., Robillot,
C., Robson, B., Schroeder, T., Skerratt, J., Tickell, S., Tuteja, N.,
Wild-Allen, K., and Yu, J.: eReefs: An operational information system for
managing the Great Barrier Reef, J. Oper. Oceanogr., 12, S12–S28,
https://doi.org/10.1080/1755876X.2019.1650589, 2019.
Sverdrup, H. U.: On conditions for the vernal blooming of phytoplankton,
ICES J. Mar. Sci., 18, 287–295, https://doi.org/10.1093/icesjms/18.3.287, 1953.
Tinker, J. P. and Howes, E. L.: The impacts of climate change on temperature (air and sea), relevant to the coastal and marine environment around the UK, MCCIP Science Review 2020, available at: http://marine.gov.scot/sma/content/impacts-climate-change-temperature-air-and-sea-relevant-coastal-and-marine-environment (last access: 1 July 2021), 2020.
van der Molen, J., Ruardij, P., and Greenwood, N.: A 3D SPM model for
biogeochemical modelling, with application to the northwest European
continental shelf, J. Sea Res., 127, 63–81,
https://doi.org/10.1016/j.seares.2016.12.003, 2017.
Van Hooidonk, R., Maynard, J., Tamelander, J., Gove, J., Ahmadia, G.,
Raymundo, L., Williams, G., Heron, S. F., and Planes, S.: Local-scale
projections of coral reef futures and implications of the Paris Agreement,
Sci. Rep., 6, 39666, https://doi.org/10.1038/srep39666, 2016.
Wafar, M. V. M., Le Corre, P., and Birrien, J. L.: Nutrients and primary
production in permanently well-mixed temperate coastal waters, Estuar.
Coast. Shelf Sci., 17, 431–446, https://doi.org/10.1016/0272-7714(83)90128-2, 1983.
Short summary
This paper describes the latest version of a simple model for simulating coastal oceanography in response to changes in weather and climate. The latest revision of this model makes scientific improvements but focuses on improvements that allow the model to be run simply at large scales and for long periods of time to explore the implications of (for example) future climate change along large areas of coastline.
This paper describes the latest version of a simple model for simulating coastal oceanography in...
