Articles | Volume 8, issue 11
https://doi.org/10.5194/gmd-8-3593-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/gmd-8-3593-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Development and technical paper
| 
06 Nov 2015
Development and technical paper |
| 06 Nov 2015
Taking off the training wheels: the properties of a dynamic vegetation model without climate envelopes, CLM4.5(ED)
R. A. Fisher
CORRESPONDING AUTHOR
National Center for Atmospheric Research, Boulder, Colorado 80305, USA
S. Muszala
National Center for Atmospheric Research, Boulder, Colorado 80305, USA
M. Verteinstein
National Center for Atmospheric Research, Boulder, Colorado 80305, USA
P. Lawrence
National Center for Atmospheric Research, Boulder, Colorado 80305, USA
C. Xu
Los Alamos National Laboratory, Los Alamos, New Mexico 87454, USA
N. G. McDowell
Los Alamos National Laboratory, Los Alamos, New Mexico 87454, USA
R. G. Knox
Lawrence Berkeley National Laboratory, Berkeley, California, USA
Lawrence Berkeley National Laboratory, Berkeley, California, USA
Lawrence Berkeley National Laboratory, Berkeley, California, USA
B. M. Rogers
Woods Hole Research Center, Falmouth, Massachusetts, USA
A. Spessa
Department Environment, Earth and Ecosystems, Open University, Milton Keynes, UK
Department Atmospheric Chemistry, Max Planck Institute for Chemistry, Mainz, Germany
D. Lawrence
National Center for Atmospheric Research, Boulder, Colorado 80305, USA
National Center for Atmospheric Research, Boulder, Colorado 80305, USA
Related authors
Maoyi Huang, Yi Xu, Marcos Longo, Michael Keller, Ryan G. Knox, Charles D. Koven, and Rosie A. Fisher
Biogeosciences, 17, 4999–5023, https://doi.org/10.5194/bg-17-4999-2020, https://doi.org/10.5194/bg-17-4999-2020, 2020
Short summary
Short summary
The Functionally Assembled Terrestrial Ecosystem Simulator (FATES) is enhanced to mimic the ecological, biophysical, and biogeochemical processes following a logging event. The model can specify the timing and aerial extent of logging events; determine the survivorship of cohorts in the disturbed forest; and modifying the biomass, coarse woody debris, and litter pools. This study lays the foundation to simulate land use change and forest degradation in FATES as part of an Earth system model.
Ashehad A. Ali, Yuanchao Fan, Marife D. Corre, Martyna M. Kotowska, Evelyn Hassler, Fernando E. Moyano, Christian Stiegler, Alexander Röll, Ana Meijide, Andre Ringeler, Christoph Leuschner, Tania June, Suria Tarigan, Holger Kreft, Dirk Hölscher, Chonggang Xu, Charles D. Koven, Rosie Fisher, Edzo Veldkamp, and Alexander Knohl
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2018-236, https://doi.org/10.5194/gmd-2018-236, 2018
Revised manuscript not accepted
Short summary
Short summary
We used carbon-use and water-use related datasets of small-holder rubber plantations from Jambi province, Indonesia to develop and calibrate a rubber plant functional type for the Community Land Model (CLM-rubber). Increased sensitivity of stomata to soil water stress and enhanced respiration costs enabled the model to capture the magnitude of transpiration and leaf area index. Including temporal variations in leaf life span enabled the model to better capture the seasonality of leaf litterfall.
Danica L. Lombardozzi, Melanie J. B. Zeppel, Rosie A. Fisher, and Ahmed Tawfik
Geosci. Model Dev., 10, 321–331, https://doi.org/10.5194/gmd-10-321-2017, https://doi.org/10.5194/gmd-10-321-2017, 2017
Short summary
Short summary
Earth's terrestrial surface influences climate by exchanging carbon and water with the atmosphere through stomatal pores. However, most land-surface models, used to predict global carbon and water fluxes, estimate that water lost through stomata is less than what observations show. In this study, we integrate plant water loss data from 204 species into a global land surface model, finding that global estimates of plant water loss increase, soil moisture decreases, and carbon gain also decreases.
K. M. Dahlin, R. A. Fisher, and P. J. Lawrence
Biogeosciences, 12, 5061–5074, https://doi.org/10.5194/bg-12-5061-2015, https://doi.org/10.5194/bg-12-5061-2015, 2015
Short summary
Short summary
We compared monthly leaf area index (LAI) estimates from the Community Land Model (CLM) in stress/drought deciduous regions of the world to a satellite-derived estimate of LAI. This comparison revealed an issue in the CLM in which leaves begin to grow during the dry season due to unrealistic soil water movement. We introduced a rainfall trigger to the stress deciduous algorithm to address this issue, then showed the impacts of this change on the fire cycle and stored carbon.
E. Joetzjer, C. Delire, H. Douville, P. Ciais, B. Decharme, R. Fisher, B. Christoffersen, J. C. Calvet, A. C. L. da Costa, L. V. Ferreira, and P. Meir
Geosci. Model Dev., 7, 2933–2950, https://doi.org/10.5194/gmd-7-2933-2014, https://doi.org/10.5194/gmd-7-2933-2014, 2014
Danny M. Leung, Jasper F. Kok, Longlei Li, David M. Lawrence, Natalie M. Mahowald, Simone Tilmes, and Erik Kluzek
Atmos. Chem. Phys., 25, 2311–2331, https://doi.org/10.5194/acp-25-2311-2025, https://doi.org/10.5194/acp-25-2311-2025, 2025
Short summary
Short summary
This study derives a gridded dust emission dataset for 1841–2000 by employing a combination of observed dust from core records and reanalyzed global dust cycle constraints. We evaluate the ability of global models to replicate the observed historical dust variability by using the emission dataset to force a historical simulation in an Earth system model. We show that prescribing our emissions forces the model to better match observations than other mechanistic models.
Detlef van Vuuren, Brian O'Neill, Claudia Tebaldi, Louise Chini, Pierre Friedlingstein, Tomoko Hasegawa, Keywan Riahi, Benjamin Sanderson, Bala Govindasamy, Nico Bauer, Veronika Eyring, Cheikh Fall, Katja Frieler, Matthew Gidden, Laila Gohar, Andrew Jones, Andrew King, Reto Knutti, Elmar Kriegler, Peter Lawrence, Chris Lennard, Jason Lowe, Camila Mathison, Shahbaz Mehmood, Luciana Prado, Qiang Zhang, Steven Rose, Alexander Ruane, Carl-Friederich Schleussner, Roland Seferian, Jana Sillmann, Chris Smith, Anna Sörensson, Swapna Panickal, Kaoru Tachiiri, Naomi Vaughan, Saritha Vishwanathan, Tokuta Yokohata, and Tilo Ziehn
EGUsphere, https://doi.org/10.5194/egusphere-2024-3765, https://doi.org/10.5194/egusphere-2024-3765, 2025
Short summary
Short summary
We propose a set of six plausible 21st century emission scenarios, and their multi-century extensions, that will be used by the international community of climate modeling centers to produce the next generation of climate projections. These projections will support climate, impact and mitigation researchers, provide information to practitioners to address future risks from climate change, and contribute to policymakers’ considerations of the trade-offs among various levels of mitigation.
Gab Abramowitz, Anna Ukkola, Sanaa Hobeichi, Jon Cranko Page, Mathew Lipson, Martin G. De Kauwe, Samuel Green, Claire Brenner, Jonathan Frame, Grey Nearing, Martyn Clark, Martin Best, Peter Anthoni, Gabriele Arduini, Souhail Boussetta, Silvia Caldararu, Kyeungwoo Cho, Matthias Cuntz, David Fairbairn, Craig R. Ferguson, Hyungjun Kim, Yeonjoo Kim, Jürgen Knauer, David Lawrence, Xiangzhong Luo, Sergey Malyshev, Tomoko Nitta, Jerome Ogee, Keith Oleson, Catherine Ottlé, Phillipe Peylin, Patricia de Rosnay, Heather Rumbold, Bob Su, Nicolas Vuichard, Anthony P. Walker, Xiaoni Wang-Faivre, Yunfei Wang, and Yijian Zeng
Biogeosciences, 21, 5517–5538, https://doi.org/10.5194/bg-21-5517-2024, https://doi.org/10.5194/bg-21-5517-2024, 2024
Short summary
Short summary
This paper evaluates land models – computer-based models that simulate ecosystem dynamics; land carbon, water, and energy cycles; and the role of land in the climate system. It uses machine learning and AI approaches to show that, despite the complexity of land models, they do not perform nearly as well as they could given the amount of information they are provided with about the prediction problem.
Anna Talucci, Michael M. Loranty, Jean E. Holloway, Brendan M. Rogers, Heather D. Alexander, Natalie Baillargeon, Jennifer L. Baltzer, Logan T. Berner, Amy Breen, Leya Brodt, Brian Buma, Jacqueline Dean, Clement J. F. Delcourt, Lucas R. Diaz, Catherine M. Dieleman, Thomas A. Douglas, Gerald V. Frost, Benjamin V. Gaglioti, Rebecca E. Hewitt, Teresa Hollingsworth, M. Torre Jorgenson, Mark J. Lara, Rachel A. Loehman, Michelle C. Mack, Kristen L. Manies, Christina Minions, Susan M. Natali, Jonathan A. O'Donnell, David Olefeldt, Alison K. Paulson, Adrian V. Rocha, Lisa B. Saperstein, Tatiana A. Shestakova, Seeta Sistla, Oleg Sizov, Andrey Soromotin, Merritt R. Turetsky, Sander Veraverbeke, and Michelle A. Walvoord
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-526, https://doi.org/10.5194/essd-2024-526, 2024
Revised manuscript accepted for ESSD
Short summary
Short summary
Wildfires have the potential to accelerate permafrost thaw and the associated feedbacks to climate change. We assembled a data set of permafrost thaw depth measurements from burned and unburned sites contributed by researchers from across the northern high latitude region. We estimated maximum thaw depth for each measurement, which addresses a key challenge: the ability to assess impacts of wildfire on maximum thaw depth when measurement timing varies.
Lucas R. Diaz, Clement J. F. Delcourt, Moritz Langer, Michael M. Loranty, Brendan M. Rogers, Rebecca C. Scholten, Tatiana A. Shestakova, Anna C. Talucci, Jorien E. Vonk, Sonam Wangchuk, and Sander Veraverbeke
Earth Syst. Dynam., 15, 1459–1482, https://doi.org/10.5194/esd-15-1459-2024, https://doi.org/10.5194/esd-15-1459-2024, 2024
Short summary
Short summary
Our study in eastern Siberia investigated how fires affect permafrost thaw depth in larch forests. We found that fire induces deeper thaw, yet this process was mediated by topography and vegetation. By combining field and satellite data, we estimated summer thaw depth across an entire fire scar. This research provides insights into post-fire permafrost dynamics and the use of satellite data for mapping fire-induced permafrost thaw.
Benjamin M. Sanderson, Ben B. B. Booth, John Dunne, Veronika Eyring, Rosie A. Fisher, Pierre Friedlingstein, Matthew J. Gidden, Tomohiro Hajima, Chris D. Jones, Colin G. Jones, Andrew King, Charles D. Koven, David M. Lawrence, Jason Lowe, Nadine Mengis, Glen P. Peters, Joeri Rogelj, Chris Smith, Abigail C. Snyder, Isla R. Simpson, Abigail L. S. Swann, Claudia Tebaldi, Tatiana Ilyina, Carl-Friedrich Schleussner, Roland Séférian, Bjørn H. Samset, Detlef van Vuuren, and Sönke Zaehle
Geosci. Model Dev., 17, 8141–8172, https://doi.org/10.5194/gmd-17-8141-2024, https://doi.org/10.5194/gmd-17-8141-2024, 2024
Short summary
Short summary
We discuss how, in order to provide more relevant guidance for climate policy, coordinated climate experiments should adopt a greater focus on simulations where Earth system models are provided with carbon emissions from fossil fuels together with land use change instructions, rather than past approaches that have largely focused on experiments with prescribed atmospheric carbon dioxide concentrations. We discuss how these goals might be achieved in coordinated climate modeling experiments.
Benjamin Mark Sanderson, Victor Brovkin, Rosie Fisher, David Hohn, Tatiana Ilyina, Chris Jones, Torben Koenigk, Charles Koven, Hongmei Li, David Lawrence, Peter Lawrence, Spencer Liddicoat, Andrew Macdougall, Nadine Mengis, Zebedee Nicholls, Eleanor O'Rourke, Anastasia Romanou, Marit Sandstad, Jörg Schwinger, Roland Seferian, Lori Sentman, Isla Simpson, Chris Smith, Norman Steinert, Abigail Swann, Jerry Tjiputra, and Tilo Ziehn
EGUsphere, https://doi.org/10.5194/egusphere-2024-3356, https://doi.org/10.5194/egusphere-2024-3356, 2024
Short summary
Short summary
This study investigates how climate models warm in response to simplified carbon emissions trajectories, refining understanding of climate reversibility and commitment. Metrics are defined for warming response to cumulative emissions and for the cessation or ramp-down to net-zero and net-negative levels. Results indicate that previous concentration-driven experiments may have overstated zero emissions commitment due to emissions rates exceeding historical levels.
Sabin I. Taranu, David M. Lawrence, Yoshihide Wada, Ting Tang, Erik Kluzek, Sam Rabin, Yi Yao, Steven J. De Hertog, Inne Vanderkelen, and Wim Thiery
Geosci. Model Dev., 17, 7365–7399, https://doi.org/10.5194/gmd-17-7365-2024, https://doi.org/10.5194/gmd-17-7365-2024, 2024
Short summary
Short summary
In this study, we improved a climate model by adding the representation of water use sectors such as domestic, industry, and agriculture. This new feature helps us understand how water is used and supplied in various areas. We tested our model from 1971 to 2010 and found that it accurately identifies areas with water scarcity. By modelling the competition between sectors when water availability is limited, the model helps estimate the intensity and extent of individual sectors' water shortages.
Cecile B. Menard, Sirpa Rasmus, Ioanna Merkouriadi, Gianpaolo Balsamo, Annett Bartsch, Chris Derksen, Florent Domine, Marie Dumont, Dorothee Ehrich, Richard Essery, Bruce C. Forbes, Gerhard Krinner, David Lawrence, Glen Liston, Heidrun Matthes, Nick Rutter, Melody Sandells, Martin Schneebeli, and Sari Stark
The Cryosphere, 18, 4671–4686, https://doi.org/10.5194/tc-18-4671-2024, https://doi.org/10.5194/tc-18-4671-2024, 2024
Short summary
Short summary
Computer models, like those used in climate change studies, are written by modellers who have to decide how best to construct the models in order to satisfy the purpose they serve. Using snow modelling as an example, we examine the process behind the decisions to understand what motivates or limits modellers in their decision-making. We find that the context in which research is undertaken is often more crucial than scientific limitations. We argue for more transparency in our research practice.
Elchin E. Jafarov, Helene Genet, Velimir V. Vesselinov, Valeria Briones, Aiza Kabeer, Andrew L. Mullen, Benjamin Maglio, Tobey Carman, Ruth Rutter, Joy Clein, Chu-Chun Chang, Dogukan Teber, Trevor Smith, Joshua M. Rady, Christina Schädel, Jennifer D. Watts, Brendan M. Rogers, and Susan M. Natali
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-158, https://doi.org/10.5194/gmd-2024-158, 2024
Revised manuscript under review for GMD
Short summary
Short summary
Thawing permafrost could greatly impact global climate. Our study improves modeling of carbon cycling in Arctic ecosystems. We developed an automated method to fine-tune a model that simulates carbon and nitrogen flows, using computer-generated data. Using computer-generated data, we tested our method and found it enhances accuracy and reduces the time needed for calibration. This work helps make climate predictions more reliable in sensitive permafrost regions.
James A. King, James Weber, Peter Lawrence, Stephanie Roe, Abigail L. S. Swann, and Maria Val Martin
Biogeosciences, 21, 3883–3902, https://doi.org/10.5194/bg-21-3883-2024, https://doi.org/10.5194/bg-21-3883-2024, 2024
Short summary
Short summary
Tackling climate change by adding, restoring, or enhancing forests is gaining global support. However, it is important to investigate the broader implications of this. We used a computer model of the Earth to investigate a future where tree cover expanded as much as possible. We found that some tropical areas were cooler because of trees pumping water into the atmosphere, but this also led to soil and rivers drying. This is important because it might be harder to maintain forests as a result.
Amali A. Amali, Clemens Schwingshackl, Akihiko Ito, Alina Barbu, Christine Delire, Daniele Peano, David M. Lawrence, David Wårlind, Eddy Robertson, Edouard L. Davin, Elena Shevliakova, Ian N. Harman, Nicolas Vuichard, Paul A. Miller, Peter J. Lawrence, Tilo Ziehn, Tomohiro Hajima, Victor Brovkin, Yanwu Zhang, Vivek K. Arora, and Julia Pongratz
EGUsphere, https://doi.org/10.5194/egusphere-2024-2460, https://doi.org/10.5194/egusphere-2024-2460, 2024
Short summary
Short summary
Our study explored the impact of anthropogenic land-use change (LUC) on climate dynamics, focusing on biogeophysical (BGP) and biogeochemical (BGC) effects using data from the CMIP6-LUMIP project. We found that LUC-induced carbon emissions contribute to a BGC warming of 0.20 °C, with BGC effects dominating globally over BGP effects, which show regional variability. Our findings highlight discrepancies in model simulations and emphasise the need for improved representations of LUC processes.
Jacquelyn K. Shuman, Rosie A. Fisher, Charles Koven, Ryan Knox, Lara Kueppers, and Chonggang Xu
Geosci. Model Dev., 17, 4643–4671, https://doi.org/10.5194/gmd-17-4643-2024, https://doi.org/10.5194/gmd-17-4643-2024, 2024
Short summary
Short summary
We adapt a fire behavior and effects module for use in a size-structured vegetation demographic model to test how climate, fire regime, and fire-tolerance plant traits interact to determine the distribution of tropical forests and grasslands. Our model captures the connection between fire disturbance and plant fire-tolerance strategies in determining plant distribution and provides a useful tool for understanding the vulnerability of these areas under changing conditions across the tropics.
Surendra Shrestha, Christopher A. Williams, Brendan M. Rogers, John Rogan, and Dominik Kulakowski
Biogeosciences, 21, 2207–2226, https://doi.org/10.5194/bg-21-2207-2024, https://doi.org/10.5194/bg-21-2207-2024, 2024
Short summary
Short summary
Here, we generated chronosequences of leaf area index (LAI) and surface albedo as a function of time since fire to demonstrate the differences in the characteristic trajectories of post-fire biophysical changes among seven forest types and 21 level III ecoregions of the western United States (US) using satellite data from different sources. We also demonstrated how climate played the dominant role in the recovery of LAI and albedo 10 and 20 years after wildfire events in the western US.
Qing Ying, Benjamin Poulter, Jennifer D. Watts, Kyle A. Arndt, Anna-Maria Virkkala, Lori Bruhwiler, Youmi Oh, Brendan M. Rogers, Susan M. Natali, Hilary Sullivan, Luke D. Schiferl, Clayton Elder, Olli Peltola, Annett Bartsch, Amanda Armstrong, Ankur R. Desai, Eugénie Euskirchen, Mathias Göckede, Bernhard Lehner, Mats B. Nilsson, Matthias Peichl, Oliver Sonnentag, Eeva-Stiina Tuittila, Torsten Sachs, Aram Kalhori, Masahito Ueyama, and Zhen Zhang
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-84, https://doi.org/10.5194/essd-2024-84, 2024
Revised manuscript accepted for ESSD
Short summary
Short summary
We present daily methane fluxes of northern wetlands at 10-km resolution during 2016–2022 (WetCH4) derived from a novel machine-learning framework with improved accuracy. We estimated an average annual CH4 emissions of 20.8 ±2.1 Tg CH4 yr-1. Emissions were intensified in 2016, 2020, and 2022, with the largest interannual variations coming from West Siberia. Continued, all-season tower observations and improved soil moisture products are needed for future improvement of CH4 upscaling.
Kirsten L. Findell, Zun Yin, Eunkyo Seo, Paul A. Dirmeyer, Nathan P. Arnold, Nathaniel Chaney, Megan D. Fowler, Meng Huang, David M. Lawrence, Po-Lun Ma, and Joseph A. Santanello Jr.
Geosci. Model Dev., 17, 1869–1883, https://doi.org/10.5194/gmd-17-1869-2024, https://doi.org/10.5194/gmd-17-1869-2024, 2024
Short summary
Short summary
We outline a request for sub-daily data to accurately capture the process-level connections between land states, surface fluxes, and the boundary layer response. This high-frequency model output will allow for more direct comparison with observational field campaigns on process-relevant timescales, enable demonstration of inter-model spread in land–atmosphere coupling processes, and aid in targeted identification of sources of deficiencies and opportunities for improvement of the models.
Danny M. Leung, Jasper F. Kok, Longlei Li, Natalie M. Mahowald, David M. Lawrence, Simone Tilmes, Erik Kluzek, Martina Klose, and Carlos Pérez García-Pando
Atmos. Chem. Phys., 24, 2287–2318, https://doi.org/10.5194/acp-24-2287-2024, https://doi.org/10.5194/acp-24-2287-2024, 2024
Short summary
Short summary
This study uses a premier Earth system model to evaluate a new desert dust emission scheme proposed in our companion paper. We show that our scheme accounts for more dust emission physics, hence matching better against observations than other existing dust emission schemes do. Our scheme's dust emissions also couple tightly with meteorology, hence likely improving the modeled dust sensitivity to climate change. We believe this work is vital for improving dust representation in climate models.
Marika M. Holland, Cecile Hannay, John Fasullo, Alexandra Jahn, Jennifer E. Kay, Michael Mills, Isla R. Simpson, William Wieder, Peter Lawrence, Erik Kluzek, and David Bailey
Geosci. Model Dev., 17, 1585–1602, https://doi.org/10.5194/gmd-17-1585-2024, https://doi.org/10.5194/gmd-17-1585-2024, 2024
Short summary
Short summary
Climate evolves in response to changing forcings, as prescribed in simulations. Models and forcings are updated over time to reflect new understanding. This makes it difficult to attribute simulation differences to either model or forcing changes. Here we present new simulations which enable the separation of model structure and forcing influence between two widely used simulation sets. Results indicate a strong influence of aerosol emission uncertainty on historical climate.
Thomas D. Hessilt, Brendan M. Rogers, Rebecca C. Scholten, Stefano Potter, Thomas A. J. Janssen, and Sander Veraverbeke
Biogeosciences, 21, 109–129, https://doi.org/10.5194/bg-21-109-2024, https://doi.org/10.5194/bg-21-109-2024, 2024
Short summary
Short summary
In boreal North America, snow and frozen ground prevail in winter, while fires occur in summer. Over the last 20 years, the northwestern parts have experienced earlier snow disappearance and more ignitions. This is opposite to the southeastern parts. However, earlier ignitions following earlier snow disappearance timing led to larger fires across the region. Snow disappearance timing may be a good proxy for ignition timing and may also influence important atmospheric conditions related to fires.
Junyan Ding, Polly Buotte, Roger Bales, Bradley Christoffersen, Rosie A. Fisher, Michael Goulden, Ryan Knox, Lara Kueppers, Jacquelyn Shuman, Chonggang Xu, and Charles D. Koven
Biogeosciences, 20, 4491–4510, https://doi.org/10.5194/bg-20-4491-2023, https://doi.org/10.5194/bg-20-4491-2023, 2023
Short summary
Short summary
We used a vegetation model to investigate how the different combinations of plant rooting depths and the sensitivity of leaves and stems to drying lead to differential responses of a pine forest to drought conditions in California, USA. We found that rooting depths are the strongest control in that ecosystem. Deep roots allow trees to fully utilize the soil water during a normal year but result in prolonged depletion of soil moisture during a severe drought and hence a high tree mortality risk.
Chonggang Xu, Bradley Christoffersen, Zachary Robbins, Ryan Knox, Rosie A. Fisher, Rutuja Chitra-Tarak, Martijn Slot, Kurt Solander, Lara Kueppers, Charles Koven, and Nate McDowell
Geosci. Model Dev., 16, 6267–6283, https://doi.org/10.5194/gmd-16-6267-2023, https://doi.org/10.5194/gmd-16-6267-2023, 2023
Short summary
Short summary
We introduce a plant hydrodynamic model for the U.S. Department of Energy (DOE)-sponsored model, the Functionally Assembled Terrestrial Ecosystem Simulator (FATES). To better understand this new model system and its functionality in tropical forest ecosystems, we conducted a global parameter sensitivity analysis at Barro Colorado Island, Panama. We identified the key parameters that affect the simulated plant hydrodynamics to guide both modeling and field campaign studies.
Danica L. Lombardozzi, William R. Wieder, Negin Sobhani, Gordon B. Bonan, David Durden, Dawn Lenz, Michael SanClements, Samantha Weintraub-Leff, Edward Ayres, Christopher R. Florian, Kyla Dahlin, Sanjiv Kumar, Abigail L. S. Swann, Claire M. Zarakas, Charles Vardeman, and Valerio Pascucci
Geosci. Model Dev., 16, 5979–6000, https://doi.org/10.5194/gmd-16-5979-2023, https://doi.org/10.5194/gmd-16-5979-2023, 2023
Short summary
Short summary
We present a novel cyberinfrastructure system that uses National Ecological Observatory Network measurements to run Community Terrestrial System Model point simulations in a containerized system. The simple interface and tutorials expand access to data and models used in Earth system research by removing technical barriers and facilitating research, educational opportunities, and community engagement. The NCAR–NEON system enables convergence of climate and ecological sciences.
Lingcheng Li, Yilin Fang, Zhonghua Zheng, Mingjie Shi, Marcos Longo, Charles D. Koven, Jennifer A. Holm, Rosie A. Fisher, Nate G. McDowell, Jeffrey Chambers, and L. Ruby Leung
Geosci. Model Dev., 16, 4017–4040, https://doi.org/10.5194/gmd-16-4017-2023, https://doi.org/10.5194/gmd-16-4017-2023, 2023
Short summary
Short summary
Accurately modeling plant coexistence in vegetation demographic models like ELM-FATES is challenging. This study proposes a repeatable method that uses machine-learning-based surrogate models to optimize plant trait parameters in ELM-FATES. Our approach significantly improves plant coexistence modeling, thus reducing errors. It has important implications for modeling ecosystem dynamics in response to climate change.
Stefano Potter, Sol Cooperdock, Sander Veraverbeke, Xanthe Walker, Michelle C. Mack, Scott J. Goetz, Jennifer Baltzer, Laura Bourgeau-Chavez, Arden Burrell, Catherine Dieleman, Nancy French, Stijn Hantson, Elizabeth E. Hoy, Liza Jenkins, Jill F. Johnstone, Evan S. Kane, Susan M. Natali, James T. Randerson, Merritt R. Turetsky, Ellen Whitman, Elizabeth Wiggins, and Brendan M. Rogers
Biogeosciences, 20, 2785–2804, https://doi.org/10.5194/bg-20-2785-2023, https://doi.org/10.5194/bg-20-2785-2023, 2023
Short summary
Short summary
Here we developed a new burned-area detection algorithm between 2001–2019 across Alaska and Canada at 500 m resolution. We estimate 2.37 Mha burned annually between 2001–2019 over the domain, emitting 79.3 Tg C per year, with a mean combustion rate of 3.13 kg C m−2. We found larger-fire years were generally associated with greater mean combustion. The burned-area and combustion datasets described here can be used for local- to continental-scale applications of boreal fire science.
Jennifer A. Holm, David M. Medvigy, Benjamin Smith, Jeffrey S. Dukes, Claus Beier, Mikhail Mishurov, Xiangtao Xu, Jeremy W. Lichstein, Craig D. Allen, Klaus S. Larsen, Yiqi Luo, Cari Ficken, William T. Pockman, William R. L. Anderegg, and Anja Rammig
Biogeosciences, 20, 2117–2142, https://doi.org/10.5194/bg-20-2117-2023, https://doi.org/10.5194/bg-20-2117-2023, 2023
Short summary
Short summary
Unprecedented climate extremes (UCEs) are expected to have dramatic impacts on ecosystems. We present a road map of how dynamic vegetation models can explore extreme drought and climate change and assess ecological processes to measure and reduce model uncertainties. The models predict strong nonlinear responses to UCEs. Due to different model representations, the models differ in magnitude and trajectory of forest loss. Therefore, we explore specific plant responses that reflect knowledge gaps.
Danny M. Leung, Jasper F. Kok, Longlei Li, Gregory S. Okin, Catherine Prigent, Martina Klose, Carlos Pérez García-Pando, Laurent Menut, Natalie M. Mahowald, David M. Lawrence, and Marcelo Chamecki
Atmos. Chem. Phys., 23, 6487–6523, https://doi.org/10.5194/acp-23-6487-2023, https://doi.org/10.5194/acp-23-6487-2023, 2023
Short summary
Short summary
Desert dust modeling is important for understanding climate change, as dust regulates the atmosphere's greenhouse effect and radiation. This study formulates and proposes a more physical and realistic desert dust emission scheme for global and regional climate models. By considering more aeolian processes in our emission scheme, our simulations match better against dust observations than existing schemes. We believe this work is vital in improving dust representation in climate models.
Wenfu Tang, Simone Tilmes, David M. Lawrence, Fang Li, Cenlin He, Louisa K. Emmons, Rebecca R. Buchholz, and Lili Xia
Atmos. Chem. Phys., 23, 5467–5486, https://doi.org/10.5194/acp-23-5467-2023, https://doi.org/10.5194/acp-23-5467-2023, 2023
Short summary
Short summary
Globally, total wildfire burned area is projected to increase over the 21st century under scenarios without geoengineering and decrease under the two geoengineering scenarios. Geoengineering reduces fire by decreasing surface temperature and wind speed and increasing relative humidity and soil water. However, geoengineering also yields reductions in precipitation, which offset some of the fire reduction.
Michael Moubarak, Seeta Sistla, Stefano Potter, Susan M. Natali, and Brendan M. Rogers
Biogeosciences, 20, 1537–1557, https://doi.org/10.5194/bg-20-1537-2023, https://doi.org/10.5194/bg-20-1537-2023, 2023
Short summary
Short summary
Tundra wildfires are increasing in frequency and severity with climate change. We show using a combination of field measurements and computational modeling that tundra wildfires result in a positive feedback to climate change by emitting significant amounts of long-lived greenhouse gasses. With these effects, attention to tundra fires is necessary for mitigating climate change.
Dave van Wees, Guido R. van der Werf, James T. Randerson, Brendan M. Rogers, Yang Chen, Sander Veraverbeke, Louis Giglio, and Douglas C. Morton
Geosci. Model Dev., 15, 8411–8437, https://doi.org/10.5194/gmd-15-8411-2022, https://doi.org/10.5194/gmd-15-8411-2022, 2022
Short summary
Short summary
We present a global fire emission model based on the GFED model framework with a spatial resolution of 500 m. The higher resolution allowed for a more detailed representation of spatial heterogeneity in fuels and emissions. Specific modules were developed to model, for example, emissions from fire-related forest loss and belowground burning. Results from the 500 m model were compared to GFED4s, showing that global emissions were relatively similar but that spatial differences were substantial.
Yilin Fang, L. Ruby Leung, Charles D. Koven, Gautam Bisht, Matteo Detto, Yanyan Cheng, Nate McDowell, Helene Muller-Landau, S. Joseph Wright, and Jeffrey Q. Chambers
Geosci. Model Dev., 15, 7879–7901, https://doi.org/10.5194/gmd-15-7879-2022, https://doi.org/10.5194/gmd-15-7879-2022, 2022
Short summary
Short summary
We develop a model that integrates an Earth system model with a three-dimensional hydrology model to explicitly resolve hillslope topography and water flow underneath the land surface to understand how local-scale hydrologic processes modulate vegetation along water availability gradients. Our coupled model can be used to improve the understanding of the diverse impact of local heterogeneity and water flux on nutrient availability and plant communities.
Yilin Fang, L. Ruby Leung, Ryan Knox, Charlie Koven, and Ben Bond-Lamberty
Geosci. Model Dev., 15, 6385–6398, https://doi.org/10.5194/gmd-15-6385-2022, https://doi.org/10.5194/gmd-15-6385-2022, 2022
Short summary
Short summary
Accounting for water movement in the soil and water transport within the plant is important for plant growth in Earth system modeling. We implemented different numerical approaches for a plant hydrodynamic model and compared their impacts on the simulated aboveground biomass (AGB) at single points and globally. We found care should be taken when discretizing the number of soil layers for numerical simulations as it can significantly affect AGB if accuracy and computational costs are of concern.
Inne Vanderkelen, Shervan Gharari, Naoki Mizukami, Martyn P. Clark, David M. Lawrence, Sean Swenson, Yadu Pokhrel, Naota Hanasaki, Ann van Griensven, and Wim Thiery
Geosci. Model Dev., 15, 4163–4192, https://doi.org/10.5194/gmd-15-4163-2022, https://doi.org/10.5194/gmd-15-4163-2022, 2022
Short summary
Short summary
Human-controlled reservoirs have a large influence on the global water cycle. However, dam operations are rarely represented in Earth system models. We implement and evaluate a widely used reservoir parametrization in a global river-routing model. Using observations of individual reservoirs, the reservoir scheme outperforms the natural lake scheme. However, both schemes show a similar performance due to biases in runoff timing and magnitude when using simulated runoff.
Charles D. Koven, Vivek K. Arora, Patricia Cadule, Rosie A. Fisher, Chris D. Jones, David M. Lawrence, Jared Lewis, Keith Lindsay, Sabine Mathesius, Malte Meinshausen, Michael Mills, Zebedee Nicholls, Benjamin M. Sanderson, Roland Séférian, Neil C. Swart, William R. Wieder, and Kirsten Zickfeld
Earth Syst. Dynam., 13, 885–909, https://doi.org/10.5194/esd-13-885-2022, https://doi.org/10.5194/esd-13-885-2022, 2022
Short summary
Short summary
We explore the long-term dynamics of Earth's climate and carbon cycles under a pair of contrasting scenarios to the year 2300 using six models that include both climate and carbon cycle dynamics. One scenario assumes very high emissions, while the second assumes a peak in emissions, followed by rapid declines to net negative emissions. We show that the models generally agree that warming is roughly proportional to carbon emissions but that many other aspects of the model projections differ.
Ronny Meier, Edouard L. Davin, Gordon B. Bonan, David M. Lawrence, Xiaolong Hu, Gregory Duveiller, Catherine Prigent, and Sonia I. Seneviratne
Geosci. Model Dev., 15, 2365–2393, https://doi.org/10.5194/gmd-15-2365-2022, https://doi.org/10.5194/gmd-15-2365-2022, 2022
Short summary
Short summary
We revise the roughness of the land surface in the CESM climate model. Guided by observational data, we increase the surface roughness of forests and decrease that of bare soil, snow, ice, and crops. These modifications alter simulated temperatures and wind speeds at and above the land surface considerably, in particular over desert regions. The revised model represents the diurnal variability of the land surface temperature better compared to satellite observations over most regions.
Tadas Nikonovas, Allan Spessa, Stefan H. Doerr, Gareth D. Clay, and Symon Mezbahuddin
Nat. Hazards Earth Syst. Sci., 22, 303–322, https://doi.org/10.5194/nhess-22-303-2022, https://doi.org/10.5194/nhess-22-303-2022, 2022
Short summary
Short summary
Extreme fire episodes in Indonesia emit large amounts of greenhouse gasses and have negative effects on human health in the region. In this study we show that such burning events can be predicted several months in advance in large parts of Indonesia using existing seasonal climate forecasts and forest cover change datasets. A reliable early fire warning system would enable local agencies to prepare and mitigate the worst of the effects.
Anna-Maria Virkkala, Susan M. Natali, Brendan M. Rogers, Jennifer D. Watts, Kathleen Savage, Sara June Connon, Marguerite Mauritz, Edward A. G. Schuur, Darcy Peter, Christina Minions, Julia Nojeim, Roisin Commane, Craig A. Emmerton, Mathias Goeckede, Manuel Helbig, David Holl, Hiroki Iwata, Hideki Kobayashi, Pasi Kolari, Efrén López-Blanco, Maija E. Marushchak, Mikhail Mastepanov, Lutz Merbold, Frans-Jan W. Parmentier, Matthias Peichl, Torsten Sachs, Oliver Sonnentag, Masahito Ueyama, Carolina Voigt, Mika Aurela, Julia Boike, Gerardo Celis, Namyi Chae, Torben R. Christensen, M. Syndonia Bret-Harte, Sigrid Dengel, Han Dolman, Colin W. Edgar, Bo Elberling, Eugenie Euskirchen, Achim Grelle, Juha Hatakka, Elyn Humphreys, Järvi Järveoja, Ayumi Kotani, Lars Kutzbach, Tuomas Laurila, Annalea Lohila, Ivan Mammarella, Yojiro Matsuura, Gesa Meyer, Mats B. Nilsson, Steven F. Oberbauer, Sang-Jong Park, Roman Petrov, Anatoly S. Prokushkin, Christopher Schulze, Vincent L. St. Louis, Eeva-Stiina Tuittila, Juha-Pekka Tuovinen, William Quinton, Andrej Varlagin, Donatella Zona, and Viacheslav I. Zyryanov
Earth Syst. Sci. Data, 14, 179–208, https://doi.org/10.5194/essd-14-179-2022, https://doi.org/10.5194/essd-14-179-2022, 2022
Short summary
Short summary
The effects of climate warming on carbon cycling across the Arctic–boreal zone (ABZ) remain poorly understood due to the relatively limited distribution of ABZ flux sites. Fortunately, this flux network is constantly increasing, but new measurements are published in various platforms, making it challenging to understand the ABZ carbon cycle as a whole. Here, we compiled a new database of Arctic–boreal CO2 fluxes to help facilitate large-scale assessments of the ABZ carbon cycle.
Benjamin M. Sanderson, Angeline G. Pendergrass, Charles D. Koven, Florent Brient, Ben B. B. Booth, Rosie A. Fisher, and Reto Knutti
Earth Syst. Dynam., 12, 899–918, https://doi.org/10.5194/esd-12-899-2021, https://doi.org/10.5194/esd-12-899-2021, 2021
Short summary
Short summary
Emergent constraints promise a pathway to the reduction in climate projection uncertainties by exploiting ensemble relationships between observable quantities and unknown climate response parameters. This study considers the robustness of these relationships in light of biases and common simplifications that may be present in the original ensemble of climate simulations. We propose a classification scheme for constraints and a number of practical case studies.
Polly C. Buotte, Charles D. Koven, Chonggang Xu, Jacquelyn K. Shuman, Michael L. Goulden, Samuel Levis, Jessica Katz, Junyan Ding, Wu Ma, Zachary Robbins, and Lara M. Kueppers
Biogeosciences, 18, 4473–4490, https://doi.org/10.5194/bg-18-4473-2021, https://doi.org/10.5194/bg-18-4473-2021, 2021
Short summary
Short summary
We present an approach for ensuring the definitions of plant types in dynamic vegetation models are connected to the underlying ecological processes controlling community composition. Our approach can be applied regionally or globally. Robust resolution of community composition will allow us to use these models to address important questions related to future climate and management effects on plant community composition, structure, carbon storage, and feedbacks within the Earth system.
Wu Ma, Lu Zhai, Alexandria Pivovaroff, Jacquelyn Shuman, Polly Buotte, Junyan Ding, Bradley Christoffersen, Ryan Knox, Max Moritz, Rosie A. Fisher, Charles D. Koven, Lara Kueppers, and Chonggang Xu
Biogeosciences, 18, 4005–4020, https://doi.org/10.5194/bg-18-4005-2021, https://doi.org/10.5194/bg-18-4005-2021, 2021
Short summary
Short summary
We use a hydrodynamic demographic vegetation model to estimate live fuel moisture dynamics of chaparral shrubs, a dominant vegetation type in fire-prone southern California. Our results suggest that multivariate climate change could cause a significant net reduction in live fuel moisture and thus exacerbate future wildfire danger in chaparral shrub systems.
Leah Birch, Christopher R. Schwalm, Sue Natali, Danica Lombardozzi, Gretchen Keppel-Aleks, Jennifer Watts, Xin Lin, Donatella Zona, Walter Oechel, Torsten Sachs, Thomas Andrew Black, and Brendan M. Rogers
Geosci. Model Dev., 14, 3361–3382, https://doi.org/10.5194/gmd-14-3361-2021, https://doi.org/10.5194/gmd-14-3361-2021, 2021
Short summary
Short summary
The high-latitude landscape or Arctic–boreal zone has been warming rapidly, impacting the carbon balance both regionally and globally. Given the possible global effects of climate change, it is important to have accurate climate model simulations. We assess the simulation of the Arctic–boreal carbon cycle in the Community Land Model (CLM 5.0). We find biases in both the timing and magnitude photosynthesis. We then use observational data to improve the simulation of the carbon cycle.
Katherine Dagon, Benjamin M. Sanderson, Rosie A. Fisher, and David M. Lawrence
Adv. Stat. Clim. Meteorol. Oceanogr., 6, 223–244, https://doi.org/10.5194/ascmo-6-223-2020, https://doi.org/10.5194/ascmo-6-223-2020, 2020
Short summary
Short summary
Uncertainties in land model projections are important to understand in order to build confidence in Earth system modeling. In this paper, we introduce a framework for estimating uncertain land model parameters with machine learning. This method increases the computational efficiency of this process relative to traditional hand tuning approaches and provides objective methods to assess the results. We further identify key processes and parameters that are important for accurate land modeling.
Robinson I. Negrón-Juárez, Jennifer A. Holm, Boris Faybishenko, Daniel Magnabosco-Marra, Rosie A. Fisher, Jacquelyn K. Shuman, Alessandro C. de Araujo, William J. Riley, and Jeffrey Q. Chambers
Biogeosciences, 17, 6185–6205, https://doi.org/10.5194/bg-17-6185-2020, https://doi.org/10.5194/bg-17-6185-2020, 2020
Short summary
Short summary
The temporal variability in the Landsat satellite near-infrared (NIR) band captured the dynamics of forest regrowth after disturbances in Central Amazon. This variability was represented by the dynamics of forest regrowth after disturbances were properly represented by the ELM-FATES model (Functionally Assembled Terrestrial Ecosystem Simulator (FATES) in the Energy Exascale Earth System Model (E3SM) Land Model (ELM)).
Lena R. Boysen, Victor Brovkin, Julia Pongratz, David M. Lawrence, Peter Lawrence, Nicolas Vuichard, Philippe Peylin, Spencer Liddicoat, Tomohiro Hajima, Yanwu Zhang, Matthias Rocher, Christine Delire, Roland Séférian, Vivek K. Arora, Lars Nieradzik, Peter Anthoni, Wim Thiery, Marysa M. Laguë, Deborah Lawrence, and Min-Hui Lo
Biogeosciences, 17, 5615–5638, https://doi.org/10.5194/bg-17-5615-2020, https://doi.org/10.5194/bg-17-5615-2020, 2020
Short summary
Short summary
We find a biogeophysically induced global cooling with strong carbon losses in a 20 million square kilometre idealized deforestation experiment performed by nine CMIP6 Earth system models. It takes many decades for the temperature signal to emerge, with non-local effects playing an important role. Despite a consistent experimental setup, models diverge substantially in their climate responses. This study offers unprecedented insights for understanding land use change effects in CMIP6 models.
Sheri Mickelson, Alice Bertini, Gary Strand, Kevin Paul, Eric Nienhouse, John Dennis, and Mariana Vertenstein
Geosci. Model Dev., 13, 5567–5581, https://doi.org/10.5194/gmd-13-5567-2020, https://doi.org/10.5194/gmd-13-5567-2020, 2020
Short summary
Short summary
Every generation of MIP exercises introduces new layers of complexity and an exponential growth in the amount of data requested. CMIP6 required us to develop a new tool chain and forced us to change our methodologies. The new methods discussed in this paper provided us with an 18 times faster speedup over our existing methods. This allowed us to meet our deadlines and we were able to publish more than half a million data sets on the Earth System Grid Federation (ESGF) for the CMIP6 project.
George C. Hurtt, Louise Chini, Ritvik Sahajpal, Steve Frolking, Benjamin L. Bodirsky, Katherine Calvin, Jonathan C. Doelman, Justin Fisk, Shinichiro Fujimori, Kees Klein Goldewijk, Tomoko Hasegawa, Peter Havlik, Andreas Heinimann, Florian Humpenöder, Johan Jungclaus, Jed O. Kaplan, Jennifer Kennedy, Tamás Krisztin, David Lawrence, Peter Lawrence, Lei Ma, Ole Mertz, Julia Pongratz, Alexander Popp, Benjamin Poulter, Keywan Riahi, Elena Shevliakova, Elke Stehfest, Peter Thornton, Francesco N. Tubiello, Detlef P. van Vuuren, and Xin Zhang
Geosci. Model Dev., 13, 5425–5464, https://doi.org/10.5194/gmd-13-5425-2020, https://doi.org/10.5194/gmd-13-5425-2020, 2020
Short summary
Short summary
To estimate the effects of human land use activities on the carbon–climate system, a new set of global gridded land use forcing datasets was developed to link historical land use data to eight future scenarios in a standard format required by climate models. This new generation of land use harmonization (LUH2) includes updated inputs, higher spatial resolution, more detailed land use transitions, and the addition of important agricultural management layers; it will be used for CMIP6 simulations.
Maoyi Huang, Yi Xu, Marcos Longo, Michael Keller, Ryan G. Knox, Charles D. Koven, and Rosie A. Fisher
Biogeosciences, 17, 4999–5023, https://doi.org/10.5194/bg-17-4999-2020, https://doi.org/10.5194/bg-17-4999-2020, 2020
Short summary
Short summary
The Functionally Assembled Terrestrial Ecosystem Simulator (FATES) is enhanced to mimic the ecological, biophysical, and biogeochemical processes following a logging event. The model can specify the timing and aerial extent of logging events; determine the survivorship of cohorts in the disturbed forest; and modifying the biomass, coarse woody debris, and litter pools. This study lays the foundation to simulate land use change and forest degradation in FATES as part of an Earth system model.
Vivek K. Arora, Anna Katavouta, Richard G. Williams, Chris D. Jones, Victor Brovkin, Pierre Friedlingstein, Jörg Schwinger, Laurent Bopp, Olivier Boucher, Patricia Cadule, Matthew A. Chamberlain, James R. Christian, Christine Delire, Rosie A. Fisher, Tomohiro Hajima, Tatiana Ilyina, Emilie Joetzjer, Michio Kawamiya, Charles D. Koven, John P. Krasting, Rachel M. Law, David M. Lawrence, Andrew Lenton, Keith Lindsay, Julia Pongratz, Thomas Raddatz, Roland Séférian, Kaoru Tachiiri, Jerry F. Tjiputra, Andy Wiltshire, Tongwen Wu, and Tilo Ziehn
Biogeosciences, 17, 4173–4222, https://doi.org/10.5194/bg-17-4173-2020, https://doi.org/10.5194/bg-17-4173-2020, 2020
Short summary
Short summary
Since the preindustrial period, land and ocean have taken up about half of the carbon emitted into the atmosphere by humans. Comparison of different earth system models with the carbon cycle allows us to assess how carbon uptake by land and ocean differs among models. This yields an estimate of uncertainty in our understanding of how land and ocean respond to increasing atmospheric CO2. This paper summarizes results from two such model intercomparison projects that use an idealized scenario.
Charles D. Koven, Ryan G. Knox, Rosie A. Fisher, Jeffrey Q. Chambers, Bradley O. Christoffersen, Stuart J. Davies, Matteo Detto, Michael C. Dietze, Boris Faybishenko, Jennifer Holm, Maoyi Huang, Marlies Kovenock, Lara M. Kueppers, Gregory Lemieux, Elias Massoud, Nathan G. McDowell, Helene C. Muller-Landau, Jessica F. Needham, Richard J. Norby, Thomas Powell, Alistair Rogers, Shawn P. Serbin, Jacquelyn K. Shuman, Abigail L. S. Swann, Charuleka Varadharajan, Anthony P. Walker, S. Joseph Wright, and Chonggang Xu
Biogeosciences, 17, 3017–3044, https://doi.org/10.5194/bg-17-3017-2020, https://doi.org/10.5194/bg-17-3017-2020, 2020
Short summary
Short summary
Tropical forests play a crucial role in governing climate feedbacks, and are incredibly diverse ecosystems, yet most Earth system models do not take into account the diversity of plant traits in these forests and how this diversity may govern feedbacks. We present an approach to represent diverse competing plant types within Earth system models, test this approach at a tropical forest site, and explore how the representation of disturbance and competition governs traits of the forest community.
Andrew H. MacDougall, Thomas L. Frölicher, Chris D. Jones, Joeri Rogelj, H. Damon Matthews, Kirsten Zickfeld, Vivek K. Arora, Noah J. Barrett, Victor Brovkin, Friedrich A. Burger, Micheal Eby, Alexey V. Eliseev, Tomohiro Hajima, Philip B. Holden, Aurich Jeltsch-Thömmes, Charles Koven, Nadine Mengis, Laurie Menviel, Martine Michou, Igor I. Mokhov, Akira Oka, Jörg Schwinger, Roland Séférian, Gary Shaffer, Andrei Sokolov, Kaoru Tachiiri, Jerry Tjiputra, Andrew Wiltshire, and Tilo Ziehn
Biogeosciences, 17, 2987–3016, https://doi.org/10.5194/bg-17-2987-2020, https://doi.org/10.5194/bg-17-2987-2020, 2020
Short summary
Short summary
The Zero Emissions Commitment (ZEC) is the change in global temperature expected to occur following the complete cessation of CO2 emissions. Here we use 18 climate models to assess the value of ZEC. For our experiment we find that ZEC 50 years after emissions cease is between −0.36 to +0.29 °C. The most likely value of ZEC is assessed to be close to zero. However, substantial continued warming for decades or centuries following cessation of CO2 emission cannot be ruled out.
Tzu-Shun Lin, Yang Song, Atul K. Jain, Peter Lawrence, and Haroon S. Kheshgi
Biogeosciences Discuss., https://doi.org/10.5194/bg-2020-68, https://doi.org/10.5194/bg-2020-68, 2020
Preprint withdrawn
Short summary
Short summary
ISAM model was used to estimate soybean and maize crop yields over 1901–2100 driven by changes in environmental factors and management factors. Over the 20th century, each of these factors contributes to the increase in global crop yield with increasing nitrogen fertilizer application the strongest of these drivers for maize and increasing [CO2] the strongest for soybean. Over the 21st century, changing climate drives yield lower, while rising [CO2] drives yield higher for both crops.
Christian G. Andresen, David M. Lawrence, Cathy J. Wilson, A. David McGuire, Charles Koven, Kevin Schaefer, Elchin Jafarov, Shushi Peng, Xiaodong Chen, Isabelle Gouttevin, Eleanor Burke, Sarah Chadburn, Duoying Ji, Guangsheng Chen, Daniel Hayes, and Wenxin Zhang
The Cryosphere, 14, 445–459, https://doi.org/10.5194/tc-14-445-2020, https://doi.org/10.5194/tc-14-445-2020, 2020
Short summary
Short summary
Widely-used land models project near-surface drying of the terrestrial Arctic despite increases in the net water balance driven by climate change. Drying was generally associated with increases of active-layer depth and permafrost thaw in a warming climate. However, models lack important mechanisms such as thermokarst and soil subsidence that will change the hydrological regime and add to the large uncertainty in the future Arctic hydrological state and the associated permafrost carbon feedback.
Altug Ekici, Hanna Lee, David M. Lawrence, Sean C. Swenson, and Catherine Prigent
Geosci. Model Dev., 12, 5291–5300, https://doi.org/10.5194/gmd-12-5291-2019, https://doi.org/10.5194/gmd-12-5291-2019, 2019
Short summary
Short summary
Ice-rich permafrost thaw can create expanding thermokarst lakes as well as shrinking large wetlands. Such processes can have major biogeochemical implications and feedbacks to climate systems by altering the pathways and rates of permafrost carbon release. We developed a new model parameterization that allows a direct representation of surface water dynamics with subsidence. Our results show increased surface water fractions around western Siberian plains and northeastern territories of Canada.
Chris D. Jones, Thomas L. Frölicher, Charles Koven, Andrew H. MacDougall, H. Damon Matthews, Kirsten Zickfeld, Joeri Rogelj, Katarzyna B. Tokarska, Nathan P. Gillett, Tatiana Ilyina, Malte Meinshausen, Nadine Mengis, Roland Séférian, Michael Eby, and Friedrich A. Burger
Geosci. Model Dev., 12, 4375–4385, https://doi.org/10.5194/gmd-12-4375-2019, https://doi.org/10.5194/gmd-12-4375-2019, 2019
Short summary
Short summary
Global warming is simply related to the total emission of CO2 allowing us to define a carbon budget. However, information on the Zero Emissions Commitment is a key missing link to assess remaining carbon budgets to achieve the climate targets of the Paris Agreement. It was therefore decided that a small targeted MIP activity to fill this knowledge gap would be extremely valuable. This article formalises the experimental design alongside the other CMIP6 documentation papers.
Marcos Longo, Ryan G. Knox, David M. Medvigy, Naomi M. Levine, Michael C. Dietze, Yeonjoo Kim, Abigail L. S. Swann, Ke Zhang, Christine R. Rollinson, Rafael L. Bras, Steven C. Wofsy, and Paul R. Moorcroft
Geosci. Model Dev., 12, 4309–4346, https://doi.org/10.5194/gmd-12-4309-2019, https://doi.org/10.5194/gmd-12-4309-2019, 2019
Short summary
Short summary
Our paper describes the Ecosystem Demography model. This computer program calculates how plants and ground exchange heat, water, and carbon with the air, and how plants grow, reproduce and die in different climates. Most models simplify forests to an average big tree. We consider that tall, deep-rooted trees get more light and water than small plants, and that some plants can with shade and drought. This diversity helps us to better explain how plants live and interact with the atmosphere.
Marcos Longo, Ryan G. Knox, Naomi M. Levine, Abigail L. S. Swann, David M. Medvigy, Michael C. Dietze, Yeonjoo Kim, Ke Zhang, Damien Bonal, Benoit Burban, Plínio B. Camargo, Matthew N. Hayek, Scott R. Saleska, Rodrigo da Silva, Rafael L. Bras, Steven C. Wofsy, and Paul R. Moorcroft
Geosci. Model Dev., 12, 4347–4374, https://doi.org/10.5194/gmd-12-4347-2019, https://doi.org/10.5194/gmd-12-4347-2019, 2019
Short summary
Short summary
The Ecosystem Demography model calculates the fluxes of heat, water, and carbon between plants and ground and the air, and the life cycle of plants in different climates. To test if our calculations were reasonable, we compared our results with field and satellite measurements. Our model predicts well the extent of the Amazon forest, how much light forests absorb, and how much water forests release to the air. However, it must improve the tree growth rates and how fast dead plants decompose.
Elias C. Massoud, Chonggang Xu, Rosie A. Fisher, Ryan G. Knox, Anthony P. Walker, Shawn P. Serbin, Bradley O. Christoffersen, Jennifer A. Holm, Lara M. Kueppers, Daniel M. Ricciuto, Liang Wei, Daniel J. Johnson, Jeffrey Q. Chambers, Charlie D. Koven, Nate G. McDowell, and Jasper A. Vrugt
Geosci. Model Dev., 12, 4133–4164, https://doi.org/10.5194/gmd-12-4133-2019, https://doi.org/10.5194/gmd-12-4133-2019, 2019
Short summary
Short summary
We conducted a comprehensive sensitivity analysis to understand behaviors of a demographic vegetation model within a land surface model. By running the model 5000 times with changing input parameter values, we found that (1) the photosynthetic capacity controls carbon fluxes, (2) the allometry is important for tree growth, and (3) the targeted carbon storage is important for tree survival. These results can provide guidance on improved model parameterization for a better fit to observations.
Jennifer W. Harden, Jonathan A. O'Donnell, Katherine A. Heckman, Benjamin N. Sulman, Charles D. Koven, Chien-Lu Ping, and Gary J. Michaelson
SOIL Discuss., https://doi.org/10.5194/soil-2018-41, https://doi.org/10.5194/soil-2018-41, 2019
Revised manuscript not accepted
Short summary
Short summary
We examined changes in soil carbon (C) associated with permafrost thaw, warming, and ecosystem shifts using a space-for-time study. Soil C turnover was estimated for soil C fractions using soil C and radiocarbon data. Observations informed a simple model to track soil C change over time. Both losses and gains of soil C occur in the profile due to shifts in C among density-separated fractions. Thawing initially resulted in C gains to mineral soil and eventually C losses as warming persists.
Gerhard Krinner, Chris Derksen, Richard Essery, Mark Flanner, Stefan Hagemann, Martyn Clark, Alex Hall, Helmut Rott, Claire Brutel-Vuilmet, Hyungjun Kim, Cécile B. Ménard, Lawrence Mudryk, Chad Thackeray, Libo Wang, Gabriele Arduini, Gianpaolo Balsamo, Paul Bartlett, Julia Boike, Aaron Boone, Frédérique Chéruy, Jeanne Colin, Matthias Cuntz, Yongjiu Dai, Bertrand Decharme, Jeff Derry, Agnès Ducharne, Emanuel Dutra, Xing Fang, Charles Fierz, Josephine Ghattas, Yeugeniy Gusev, Vanessa Haverd, Anna Kontu, Matthieu Lafaysse, Rachel Law, Dave Lawrence, Weiping Li, Thomas Marke, Danny Marks, Martin Ménégoz, Olga Nasonova, Tomoko Nitta, Masashi Niwano, John Pomeroy, Mark S. Raleigh, Gerd Schaedler, Vladimir Semenov, Tanya G. Smirnova, Tobias Stacke, Ulrich Strasser, Sean Svenson, Dmitry Turkov, Tao Wang, Nander Wever, Hua Yuan, Wenyan Zhou, and Dan Zhu
Geosci. Model Dev., 11, 5027–5049, https://doi.org/10.5194/gmd-11-5027-2018, https://doi.org/10.5194/gmd-11-5027-2018, 2018
Short summary
Short summary
This paper provides an overview of a coordinated international experiment to determine the strengths and weaknesses in how climate models treat snow. The models will be assessed at point locations using high-quality reference measurements and globally using satellite-derived datasets. How well climate models simulate snow-related processes is important because changing snow cover is an important part of the global climate system and provides an important freshwater resource for human use.
Ashehad A. Ali, Yuanchao Fan, Marife D. Corre, Martyna M. Kotowska, Evelyn Hassler, Fernando E. Moyano, Christian Stiegler, Alexander Röll, Ana Meijide, Andre Ringeler, Christoph Leuschner, Tania June, Suria Tarigan, Holger Kreft, Dirk Hölscher, Chonggang Xu, Charles D. Koven, Rosie Fisher, Edzo Veldkamp, and Alexander Knohl
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2018-236, https://doi.org/10.5194/gmd-2018-236, 2018
Revised manuscript not accepted
Short summary
Short summary
We used carbon-use and water-use related datasets of small-holder rubber plantations from Jambi province, Indonesia to develop and calibrate a rubber plant functional type for the Community Land Model (CLM-rubber). Increased sensitivity of stomata to soil water stress and enhanced respiration costs enabled the model to capture the magnitude of transpiration and leaf area index. Including temporal variations in leaf life span enabled the model to better capture the seasonality of leaf litterfall.
Gregory Duveiller, Giovanni Forzieri, Eddy Robertson, Wei Li, Goran Georgievski, Peter Lawrence, Andy Wiltshire, Philippe Ciais, Julia Pongratz, Stephen Sitch, Almut Arneth, and Alessandro Cescatti
Earth Syst. Sci. Data, 10, 1265–1279, https://doi.org/10.5194/essd-10-1265-2018, https://doi.org/10.5194/essd-10-1265-2018, 2018
Short summary
Short summary
Changing the vegetation cover of the Earth's surface can alter the local energy balance, which can result in a local warming or cooling depending on the specific vegetation transition, its timing and location, as well as on the background climate. While models can theoretically simulate these effects, their skill is not well documented across space and time. Here we provide a dedicated framework to evaluate such models against measurements derived from satellite observations.
Xiyan Xu, William J. Riley, Charles D. Koven, and Gensuo Jia
Biogeosciences Discuss., https://doi.org/10.5194/bg-2018-257, https://doi.org/10.5194/bg-2018-257, 2018
Preprint withdrawn
Gordon B. Bonan, Edward G. Patton, Ian N. Harman, Keith W. Oleson, John J. Finnigan, Yaqiong Lu, and Elizabeth A. Burakowski
Geosci. Model Dev., 11, 1467–1496, https://doi.org/10.5194/gmd-11-1467-2018, https://doi.org/10.5194/gmd-11-1467-2018, 2018
Short summary
Short summary
Land surface models neglect the roughness sublayer and parameterize within-canopy turbulence in an ad hoc manner. We implemented a roughness sublayer parameterization in a multilayer canopy model to test if this theory provides a tractable parameterization extending from the ground through the canopy and the roughness sublayer. The multilayer canopy improves simulations compared with the Community Land Model (CLM4.5) while also advancing the theoretical basis for surface flux parameterizations.
Katrina E. Bennett, Theodore J. Bohn, Kurt Solander, Nathan G. McDowell, Chonggang Xu, Enrique Vivoni, and Richard S. Middleton
Hydrol. Earth Syst. Sci., 22, 709–725, https://doi.org/10.5194/hess-22-709-2018, https://doi.org/10.5194/hess-22-709-2018, 2018
Short summary
Short summary
We applied the Variable Infiltration Capacity hydrologic model to examine scenarios of change under climate and landscape disturbances in the San Juan River basin, a major sub-watershed of the Colorado River basin. Climate change coupled with landscape disturbance leads to reduced streamflow in the San Juan River basin. Disturbances are expected to be widespread in this region. Therefore, accounting for these changes within the context of climate change is imperative for water resource planning.
Nicholas C. Parazoo, Charles D. Koven, David M. Lawrence, Vladimir Romanovsky, and Charles E. Miller
The Cryosphere, 12, 123–144, https://doi.org/10.5194/tc-12-123-2018, https://doi.org/10.5194/tc-12-123-2018, 2018
Short summary
Short summary
Carbon models suggest the permafrost carbon feedback (soil carbon emissions from permafrost thaw) acts as a slow, unobservable leak. We investigate if permafrost temperature provides an observable signal to detect feedbacks. We find a slow carbon feedback in warm sub-Arctic permafrost soils, but potentially rapid feedback in cold Arctic permafrost. This is surprising since the cold permafrost region is dominated by tundra and underlain by deep, cold permafrost thought impervious to such changes.
Wei Li, Philippe Ciais, Shushi Peng, Chao Yue, Yilong Wang, Martin Thurner, Sassan S. Saatchi, Almut Arneth, Valerio Avitabile, Nuno Carvalhais, Anna B. Harper, Etsushi Kato, Charles Koven, Yi Y. Liu, Julia E.M.S. Nabel, Yude Pan, Julia Pongratz, Benjamin Poulter, Thomas A. M. Pugh, Maurizio Santoro, Stephen Sitch, Benjamin D. Stocker, Nicolas Viovy, Andy Wiltshire, Rasoul Yousefpour, and Sönke Zaehle
Biogeosciences, 14, 5053–5067, https://doi.org/10.5194/bg-14-5053-2017, https://doi.org/10.5194/bg-14-5053-2017, 2017
Short summary
Short summary
We used several observation-based biomass datasets to constrain the historical land-use change carbon emissions simulated by models. Compared to the range of the original modeled emissions (from 94 to 273 Pg C), the observationally constrained global cumulative emission estimate is 155 ± 50 Pg C (1σ Gaussian error) from 1901 to 2012. Our approach can also be applied to evaluate the LULCC impact of land-based climate mitigation policies.
Henrique F. Duarte, Brett M. Raczka, Daniel M. Ricciuto, John C. Lin, Charles D. Koven, Peter E. Thornton, David R. Bowling, Chun-Ta Lai, Kenneth J. Bible, and James R. Ehleringer
Biogeosciences, 14, 4315–4340, https://doi.org/10.5194/bg-14-4315-2017, https://doi.org/10.5194/bg-14-4315-2017, 2017
Short summary
Short summary
We evaluate the Community Land Model (CLM4.5) against observations at an old-growth coniferous forest site that is subjected to water stress each summer. We found that, after calibration, CLM was able to reasonably simulate the observed fluxes of energy and carbon, carbon stocks, carbon isotope ratios, and ecosystem response to water stress. This study demonstrates that carbon isotopes can expose structural weaknesses in CLM and provide a key constraint that may guide future model development.
Guido R. van der Werf, James T. Randerson, Louis Giglio, Thijs T. van Leeuwen, Yang Chen, Brendan M. Rogers, Mingquan Mu, Margreet J. E. van Marle, Douglas C. Morton, G. James Collatz, Robert J. Yokelson, and Prasad S. Kasibhatla
Earth Syst. Sci. Data, 9, 697–720, https://doi.org/10.5194/essd-9-697-2017, https://doi.org/10.5194/essd-9-697-2017, 2017
Short summary
Short summary
Fires occur in many vegetation types and are sometimes natural but often ignited by humans for various purposes. We have estimated how much area they burn globally and what their emissions are. Total burned area is roughly equivalent to the size of the EU with most fires burning in tropical savannas. Their emissions vary substantially from year to year and contribute to the atmospheric burdens of many trace gases and aerosols. The 20-year dataset is mostly suited for large-scale assessments.
Sina Muster, Kurt Roth, Moritz Langer, Stephan Lange, Fabio Cresto Aleina, Annett Bartsch, Anne Morgenstern, Guido Grosse, Benjamin Jones, A. Britta K. Sannel, Ylva Sjöberg, Frank Günther, Christian Andresen, Alexandra Veremeeva, Prajna R. Lindgren, Frédéric Bouchard, Mark J. Lara, Daniel Fortier, Simon Charbonneau, Tarmo A. Virtanen, Gustaf Hugelius, Juri Palmtag, Matthias B. Siewert, William J. Riley, Charles D. Koven, and Julia Boike
Earth Syst. Sci. Data, 9, 317–348, https://doi.org/10.5194/essd-9-317-2017, https://doi.org/10.5194/essd-9-317-2017, 2017
Short summary
Short summary
Waterbodies are abundant in Arctic permafrost lowlands. Most waterbodies are ponds with a surface area smaller than 100 x 100 m. The Permafrost Region Pond and Lake Database (PeRL) for the first time maps ponds as small as 10 x 10 m. PeRL maps can be used to document changes both by comparing them to historical and future imagery. The distribution of waterbodies in the Arctic is important to know in order to manage resources in the Arctic and to improve climate predictions in the Arctic.
Kathrin M. Keller, Sebastian Lienert, Anil Bozbiyik, Thomas F. Stocker, Olga V. Churakova (Sidorova), David C. Frank, Stefan Klesse, Charles D. Koven, Markus Leuenberger, William J. Riley, Matthias Saurer, Rolf Siegwolf, Rosemarie B. Weigt, and Fortunat Joos
Biogeosciences, 14, 2641–2673, https://doi.org/10.5194/bg-14-2641-2017, https://doi.org/10.5194/bg-14-2641-2017, 2017
Andrew G. Slater, David M. Lawrence, and Charles D. Koven
The Cryosphere, 11, 989–996, https://doi.org/10.5194/tc-11-989-2017, https://doi.org/10.5194/tc-11-989-2017, 2017
Short summary
Short summary
This work defines a metric for evaluation of a specific model snow process, namely, heat transfer through snow into soil. Heat transfer through snow regulates the difference in air temperature versus soil temperature. Accurate representation of the snow heat transfer process is critically important for accurate representation of the current and future state of permafrost. Utilizing this metric, we can clearly identify models that can and cannot reasonably represent snow heat transfer.
Christoph Müller, Joshua Elliott, James Chryssanthacopoulos, Almut Arneth, Juraj Balkovic, Philippe Ciais, Delphine Deryng, Christian Folberth, Michael Glotter, Steven Hoek, Toshichika Iizumi, Roberto C. Izaurralde, Curtis Jones, Nikolay Khabarov, Peter Lawrence, Wenfeng Liu, Stefan Olin, Thomas A. M. Pugh, Deepak K. Ray, Ashwan Reddy, Cynthia Rosenzweig, Alex C. Ruane, Gen Sakurai, Erwin Schmid, Rastislav Skalsky, Carol X. Song, Xuhui Wang, Allard de Wit, and Hong Yang
Geosci. Model Dev., 10, 1403–1422, https://doi.org/10.5194/gmd-10-1403-2017, https://doi.org/10.5194/gmd-10-1403-2017, 2017
Short summary
Short summary
Crop models are increasingly used in climate change impact research and integrated assessments. For the Agricultural Model Intercomparison and Improvement Project (AgMIP), 14 global gridded crop models (GGCMs) have supplied crop yield simulations (1980–2010) for maize, wheat, rice and soybean. We evaluate the performance of these models against observational data at global, national and grid cell level. We propose an open-access benchmark system against which future model versions can be tested.
Sam S. Rabin, Joe R. Melton, Gitta Lasslop, Dominique Bachelet, Matthew Forrest, Stijn Hantson, Jed O. Kaplan, Fang Li, Stéphane Mangeon, Daniel S. Ward, Chao Yue, Vivek K. Arora, Thomas Hickler, Silvia Kloster, Wolfgang Knorr, Lars Nieradzik, Allan Spessa, Gerd A. Folberth, Tim Sheehan, Apostolos Voulgarakis, Douglas I. Kelley, I. Colin Prentice, Stephen Sitch, Sandy Harrison, and Almut Arneth
Geosci. Model Dev., 10, 1175–1197, https://doi.org/10.5194/gmd-10-1175-2017, https://doi.org/10.5194/gmd-10-1175-2017, 2017
Short summary
Short summary
Global vegetation models are important tools for understanding how the Earth system will change in the future, and fire is a critical process to include. A number of different methods have been developed to represent vegetation burning. This paper describes the protocol for the first systematic comparison of global fire models, which will allow the community to explore various drivers and evaluate what mechanisms are important for improving performance. It also includes equations for all models.
Danica L. Lombardozzi, Melanie J. B. Zeppel, Rosie A. Fisher, and Ahmed Tawfik
Geosci. Model Dev., 10, 321–331, https://doi.org/10.5194/gmd-10-321-2017, https://doi.org/10.5194/gmd-10-321-2017, 2017
Short summary
Short summary
Earth's terrestrial surface influences climate by exchanging carbon and water with the atmosphere through stomatal pores. However, most land-surface models, used to predict global carbon and water fluxes, estimate that water lost through stomata is less than what observations show. In this study, we integrate plant water loss data from 204 species into a global land surface model, finding that global estimates of plant water loss increase, soil moisture decreases, and carbon gain also decreases.
Christian Folberth, Joshua Elliott, Christoph Müller, Juraj Balkovic, James Chryssanthacopoulos, Roberto C. Izaurralde, Curtis D. Jones, Nikolay Khabarov, Wenfeng Liu, Ashwan Reddy, Erwin Schmid, Rastislav Skalský, Hong Yang, Almut Arneth, Philippe Ciais, Delphine Deryng, Peter J. Lawrence, Stefan Olin, Thomas A. M. Pugh, Alex C. Ruane, and Xuhui Wang
Biogeosciences Discuss., https://doi.org/10.5194/bg-2016-527, https://doi.org/10.5194/bg-2016-527, 2016
Manuscript not accepted for further review
Short summary
Short summary
Global crop models differ in numerous aspects such as algorithms, parameterization, input data, and management assumptions. This study compares five global crop model frameworks, all based on the same field-scale model, to identify differences induced by the latter three. Results indicate that foremost nutrient supply, soil handling, and crop management induce substantial differences in crop yield estimates whereas crop cultivars primarily result in scaling of yield levels.
Bradley O. Christoffersen, Manuel Gloor, Sophie Fauset, Nikolaos M. Fyllas, David R. Galbraith, Timothy R. Baker, Bart Kruijt, Lucy Rowland, Rosie A. Fisher, Oliver J. Binks, Sanna Sevanto, Chonggang Xu, Steven Jansen, Brendan Choat, Maurizio Mencuccini, Nate G. McDowell, and Patrick Meir
Geosci. Model Dev., 9, 4227–4255, https://doi.org/10.5194/gmd-9-4227-2016, https://doi.org/10.5194/gmd-9-4227-2016, 2016
Short summary
Short summary
We developed a plant hydraulics model for tropical forests based on established plant physiological theory, and parameterized it by conducting a pantropical hydraulic trait survey. We show that a substantial amount of trait diversity can be represented in the model by a reduced set of trait dimensions. The fully parameterized model is able capture tree-level variation in water status and improves simulations of total ecosystem transpiration, showing how to incorporate hydraulic traits in models.
Brett Raczka, Henrique F. Duarte, Charles D. Koven, Daniel Ricciuto, Peter E. Thornton, John C. Lin, and David R. Bowling
Biogeosciences, 13, 5183–5204, https://doi.org/10.5194/bg-13-5183-2016, https://doi.org/10.5194/bg-13-5183-2016, 2016
Short summary
Short summary
We use carbon isotopes of CO2 to improve the performance of a land surface model, a component with earth system climate models. We found that isotope observations can provide important information related to the exchange of carbon and water from vegetation driven by environmental stress from low atmospheric moisture and nitrogen limitation. It follows that isotopes have a unique potential to improve model performance and provide insight into land surface model development.
Fang Zhao, Ning Zeng, Ghassem Asrar, Pierre Friedlingstein, Akihiko Ito, Atul Jain, Eugenia Kalnay, Etsushi Kato, Charles D. Koven, Ben Poulter, Rashid Rafique, Stephen Sitch, Shijie Shu, Beni Stocker, Nicolas Viovy, Andy Wiltshire, and Sonke Zaehle
Biogeosciences, 13, 5121–5137, https://doi.org/10.5194/bg-13-5121-2016, https://doi.org/10.5194/bg-13-5121-2016, 2016
Short summary
Short summary
The increasing seasonality of atmospheric CO2 is strongly linked with enhanced land vegetation activities in the last 5 decades, for which the importance of increasing CO2, climate and land use/cover change was evaluated in single model studies (Zeng et al., 2014; Forkel et al., 2016). Here we examine the relative importance of these factors in multiple models. Our results highlight models can show similar results in some benchmarks with different underlying regional dynamics.
Xiyan Xu, William J. Riley, Charles D. Koven, Dave P. Billesbach, Rachel Y.-W. Chang, Róisín Commane, Eugénie S. Euskirchen, Sean Hartery, Yoshinobu Harazono, Hiroki Iwata, Kyle C. McDonald, Charles E. Miller, Walter C. Oechel, Benjamin Poulter, Naama Raz-Yaseef, Colm Sweeney, Margaret Torn, Steven C. Wofsy, Zhen Zhang, and Donatella Zona
Biogeosciences, 13, 5043–5056, https://doi.org/10.5194/bg-13-5043-2016, https://doi.org/10.5194/bg-13-5043-2016, 2016
Short summary
Short summary
Wetlands are the largest global natural methane source. Peat-rich bogs and fens lying between 50°N and 70°N contribute 10–30% to this source. The predictive capability of the seasonal methane cycle can directly affect the estimation of global methane budget. We present multiscale methane seasonal emission by observations and modeling and find that the uncertainties in predicting the seasonal methane emissions are from the wetland extent, cold-season CH4 production and CH4 transport processes.
David M. Lawrence, George C. Hurtt, Almut Arneth, Victor Brovkin, Kate V. Calvin, Andrew D. Jones, Chris D. Jones, Peter J. Lawrence, Nathalie de Noblet-Ducoudré, Julia Pongratz, Sonia I. Seneviratne, and Elena Shevliakova
Geosci. Model Dev., 9, 2973–2998, https://doi.org/10.5194/gmd-9-2973-2016, https://doi.org/10.5194/gmd-9-2973-2016, 2016
Short summary
Short summary
Human land-use activities have resulted in large changes to the Earth's surface, with resulting implications for climate. In the future, land-use activities are likely to expand and intensify further to meet growing demands for food, fiber, and energy. The goal of LUMIP is to take the next steps in land-use change science, and enable, coordinate, and ultimately address the most important land-use science questions in more depth and sophistication than possible in a multi-model context to date.
Chris D. Jones, Vivek Arora, Pierre Friedlingstein, Laurent Bopp, Victor Brovkin, John Dunne, Heather Graven, Forrest Hoffman, Tatiana Ilyina, Jasmin G. John, Martin Jung, Michio Kawamiya, Charlie Koven, Julia Pongratz, Thomas Raddatz, James T. Randerson, and Sönke Zaehle
Geosci. Model Dev., 9, 2853–2880, https://doi.org/10.5194/gmd-9-2853-2016, https://doi.org/10.5194/gmd-9-2853-2016, 2016
Short summary
Short summary
How the carbon cycle interacts with climate will affect future climate change and how society plans emissions reductions to achieve climate targets. The Coupled Climate Carbon Cycle Model Intercomparison Project (C4MIP) is an endorsed activity of CMIP6 and aims to quantify these interactions and feedbacks in state-of-the-art climate models. This paper lays out the experimental protocol for modelling groups to follow to contribute to C4MIP. It is a contribution to the CMIP6 GMD Special Issue.
Bart van den Hurk, Hyungjun Kim, Gerhard Krinner, Sonia I. Seneviratne, Chris Derksen, Taikan Oki, Hervé Douville, Jeanne Colin, Agnès Ducharne, Frederique Cheruy, Nicholas Viovy, Michael J. Puma, Yoshihide Wada, Weiping Li, Binghao Jia, Andrea Alessandri, Dave M. Lawrence, Graham P. Weedon, Richard Ellis, Stefan Hagemann, Jiafu Mao, Mark G. Flanner, Matteo Zampieri, Stefano Materia, Rachel M. Law, and Justin Sheffield
Geosci. Model Dev., 9, 2809–2832, https://doi.org/10.5194/gmd-9-2809-2016, https://doi.org/10.5194/gmd-9-2809-2016, 2016
Short summary
Short summary
This manuscript describes the setup of the CMIP6 project Land Surface, Snow and Soil Moisture Model Intercomparison Project (LS3MIP).
Wenli Wang, Annette Rinke, John C. Moore, Duoying Ji, Xuefeng Cui, Shushi Peng, David M. Lawrence, A. David McGuire, Eleanor J. Burke, Xiaodong Chen, Bertrand Decharme, Charles Koven, Andrew MacDougall, Kazuyuki Saito, Wenxin Zhang, Ramdane Alkama, Theodore J. Bohn, Philippe Ciais, Christine Delire, Isabelle Gouttevin, Tomohiro Hajima, Gerhard Krinner, Dennis P. Lettenmaier, Paul A. Miller, Benjamin Smith, Tetsuo Sueyoshi, and Artem B. Sherstiukov
The Cryosphere, 10, 1721–1737, https://doi.org/10.5194/tc-10-1721-2016, https://doi.org/10.5194/tc-10-1721-2016, 2016
Short summary
Short summary
The winter snow insulation is a key process for air–soil temperature coupling and is relevant for permafrost simulations. Differences in simulated air–soil temperature relationships and their modulation by climate conditions are found to be related to the snow model physics. Generally, models with better performance apply multilayer snow schemes.
Stijn Hantson, Almut Arneth, Sandy P. Harrison, Douglas I. Kelley, I. Colin Prentice, Sam S. Rabin, Sally Archibald, Florent Mouillot, Steve R. Arnold, Paulo Artaxo, Dominique Bachelet, Philippe Ciais, Matthew Forrest, Pierre Friedlingstein, Thomas Hickler, Jed O. Kaplan, Silvia Kloster, Wolfgang Knorr, Gitta Lasslop, Fang Li, Stephane Mangeon, Joe R. Melton, Andrea Meyn, Stephen Sitch, Allan Spessa, Guido R. van der Werf, Apostolos Voulgarakis, and Chao Yue
Biogeosciences, 13, 3359–3375, https://doi.org/10.5194/bg-13-3359-2016, https://doi.org/10.5194/bg-13-3359-2016, 2016
Short summary
Short summary
Our ability to predict the magnitude and geographic pattern of past and future fire impacts rests on our ability to model fire regimes. A large variety of models exist, and it is unclear which type of model or degree of complexity is required to model fire adequately at regional to global scales. In this paper we summarize the current state of the art in fire-regime modelling and model evaluation, and outline what lessons may be learned from the Fire Model Intercomparison Project – FireMIP.
A. A. Ali, C. Xu, A. Rogers, R. A. Fisher, S. D. Wullschleger, E. C. Massoud, J. A. Vrugt, J. D. Muss, N. G. McDowell, J. B. Fisher, P. B. Reich, and C. J. Wilson
Geosci. Model Dev., 9, 587–606, https://doi.org/10.5194/gmd-9-587-2016, https://doi.org/10.5194/gmd-9-587-2016, 2016
Short summary
Short summary
We have developed a mechanistic model of leaf utilization of nitrogen for assimilation (LUNA V1.0) to predict the photosynthetic capacities at the global scale based on the optimization of key leaf-level metabolic processes. LUNA model predicts that future climatic changes would mostly affect plant photosynthetic capabilities in high-latitude regions and that Earth system models using fixed photosynthetic capabilities are likely to substantially overestimate future global photosynthesis.
W. Wang, A. Rinke, J. C. Moore, X. Cui, D. Ji, Q. Li, N. Zhang, C. Wang, S. Zhang, D. M. Lawrence, A. D. McGuire, W. Zhang, C. Delire, C. Koven, K. Saito, A. MacDougall, E. Burke, and B. Decharme
The Cryosphere, 10, 287–306, https://doi.org/10.5194/tc-10-287-2016, https://doi.org/10.5194/tc-10-287-2016, 2016
Short summary
Short summary
We use a model-ensemble approach for simulating permafrost on the Tibetan Plateau. We identify the uncertainties across models (state-of-the-art land surface models) and across methods (most commonly used methods to define permafrost).
We differentiate between uncertainties stemming from climatic driving data or from physical process parameterization, and show how these uncertainties vary seasonally and inter-annually, and how estimates are subject to the definition of permafrost used.
We differentiate between uncertainties stemming from climatic driving data or from physical process parameterization, and show how these uncertainties vary seasonally and inter-annually, and how estimates are subject to the definition of permafrost used.
S. Peng, P. Ciais, G. Krinner, T. Wang, I. Gouttevin, A. D. McGuire, D. Lawrence, E. Burke, X. Chen, B. Decharme, C. Koven, A. MacDougall, A. Rinke, K. Saito, W. Zhang, R. Alkama, T. J. Bohn, C. Delire, T. Hajima, D. Ji, D. P. Lettenmaier, P. A. Miller, J. C. Moore, B. Smith, and T. Sueyoshi
The Cryosphere, 10, 179–192, https://doi.org/10.5194/tc-10-179-2016, https://doi.org/10.5194/tc-10-179-2016, 2016
Short summary
Short summary
Soil temperature change is a key indicator of the dynamics of permafrost. Using nine process-based ecosystem models with permafrost processes, a large spread of soil temperature trends across the models. Air temperature and longwave downward radiation are the main drivers of soil temperature trends. Based on an emerging observation constraint method, the total boreal near-surface permafrost area decrease comprised between 39 ± 14 × 103 and 75 ± 14 × 103 km2 yr−1 from 1960 to 2000.
Q. Zhu, W. J. Riley, J. Tang, and C. D. Koven
Biogeosciences, 13, 341–363, https://doi.org/10.5194/bg-13-341-2016, https://doi.org/10.5194/bg-13-341-2016, 2016
Short summary
Short summary
Here we develop, calibrate, and test a nutrient competition model that accounts for multiple soil nutrients interacting with multiple biotic and abiotic consumers based on enzyme kinetics theory. Our model provides an ecologically consistent representation of nutrient competition appropriate for land biogeochemical models integrated in Earth system models.
G. Murray-Tortarolo, P. Friedlingstein, S. Sitch, V. J. Jaramillo, F. Murguía-Flores, A. Anav, Y. Liu, A. Arneth, A. Arvanitis, A. Harper, A. Jain, E. Kato, C. Koven, B. Poulter, B. D. Stocker, A. Wiltshire, S. Zaehle, and N. Zeng
Biogeosciences, 13, 223–238, https://doi.org/10.5194/bg-13-223-2016, https://doi.org/10.5194/bg-13-223-2016, 2016
Short summary
Short summary
We modelled the carbon (C) cycle in Mexico for three different time periods: past (20th century), present (2000-2005) and future (2006-2100). We used different available products to estimate C stocks and fluxes in the country. Contrary to other current estimates, our results showed that Mexico was a C sink and this is likely to continue in the next century (unless the most extreme climate-change scenarios are reached).
C. Le Quéré, R. Moriarty, R. M. Andrew, J. G. Canadell, S. Sitch, J. I. Korsbakken, P. Friedlingstein, G. P. Peters, R. J. Andres, T. A. Boden, R. A. Houghton, J. I. House, R. F. Keeling, P. Tans, A. Arneth, D. C. E. Bakker, L. Barbero, L. Bopp, J. Chang, F. Chevallier, L. P. Chini, P. Ciais, M. Fader, R. A. Feely, T. Gkritzalis, I. Harris, J. Hauck, T. Ilyina, A. K. Jain, E. Kato, V. Kitidis, K. Klein Goldewijk, C. Koven, P. Landschützer, S. K. Lauvset, N. Lefèvre, A. Lenton, I. D. Lima, N. Metzl, F. Millero, D. R. Munro, A. Murata, J. E. M. S. Nabel, S. Nakaoka, Y. Nojiri, K. O'Brien, A. Olsen, T. Ono, F. F. Pérez, B. Pfeil, D. Pierrot, B. Poulter, G. Rehder, C. Rödenbeck, S. Saito, U. Schuster, J. Schwinger, R. Séférian, T. Steinhoff, B. D. Stocker, A. J. Sutton, T. Takahashi, B. Tilbrook, I. T. van der Laan-Luijkx, G. R. van der Werf, S. van Heuven, D. Vandemark, N. Viovy, A. Wiltshire, S. Zaehle, and N. Zeng
Earth Syst. Sci. Data, 7, 349–396, https://doi.org/10.5194/essd-7-349-2015, https://doi.org/10.5194/essd-7-349-2015, 2015
Short summary
Short summary
Accurate assessment of anthropogenic carbon dioxide emissions and their redistribution among the atmosphere, ocean, and terrestrial biosphere is important to understand the global carbon cycle, support the development of climate policies, and project future climate change. We describe data sets and a methodology to quantify all major components of the global carbon budget, including their uncertainties, based on a range of data and models and their interpretation by a broad scientific community.
A. H. Baker, D. M. Hammerling, M. N. Levy, H. Xu, J. M. Dennis, B. E. Eaton, J. Edwards, C. Hannay, S. A. Mickelson, R. B. Neale, D. Nychka, J. Shollenberger, J. Tribbia, M. Vertenstein, and D. Williamson
Geosci. Model Dev., 8, 2829–2840, https://doi.org/10.5194/gmd-8-2829-2015, https://doi.org/10.5194/gmd-8-2829-2015, 2015
Short summary
Short summary
Climate simulation codes are especially complex, and their ongoing state of development requires frequent software quality assurance to both
preserve code quality and instil model confidence. To formalize and simplify this previously subjective and expensive process, we
have developed a new tool for evaluating climate consistency.
The tool has proven its utility in detecting errors in software and hardware
environments and providing rapid feedback to model developers.
C. D. Koven, J. Q. Chambers, K. Georgiou, R. Knox, R. Negron-Juarez, W. J. Riley, V. K. Arora, V. Brovkin, P. Friedlingstein, and C. D. Jones
Biogeosciences, 12, 5211–5228, https://doi.org/10.5194/bg-12-5211-2015, https://doi.org/10.5194/bg-12-5211-2015, 2015
Short summary
Short summary
Terrestrial carbon feedbacks are a large uncertainty in climate change. We separate modeled feedback responses into those governed by changed carbon inputs (productivity) and changed outputs (turnover). The disaggregated responses show that both are important in controlling inter-model uncertainty. Interactions between productivity and turnover are also important, and research must focus on these interactions for more accurate projections of carbon cycle feedbacks.
K. M. Dahlin, R. A. Fisher, and P. J. Lawrence
Biogeosciences, 12, 5061–5074, https://doi.org/10.5194/bg-12-5061-2015, https://doi.org/10.5194/bg-12-5061-2015, 2015
Short summary
Short summary
We compared monthly leaf area index (LAI) estimates from the Community Land Model (CLM) in stress/drought deciduous regions of the world to a satellite-derived estimate of LAI. This comparison revealed an issue in the CLM in which leaves begin to grow during the dry season due to unrealistic soil water movement. We introduced a rainfall trigger to the stress deciduous algorithm to address this issue, then showed the impacts of this change on the fire cycle and stored carbon.
M. A. Rawlins, A. D. McGuire, J. S. Kimball, P. Dass, D. Lawrence, E. Burke, X. Chen, C. Delire, C. Koven, A. MacDougall, S. Peng, A. Rinke, K. Saito, W. Zhang, R. Alkama, T. J. Bohn, P. Ciais, B. Decharme, I. Gouttevin, T. Hajima, D. Ji, G. Krinner, D. P. Lettenmaier, P. Miller, J. C. Moore, B. Smith, and T. Sueyoshi
Biogeosciences, 12, 4385–4405, https://doi.org/10.5194/bg-12-4385-2015, https://doi.org/10.5194/bg-12-4385-2015, 2015
Short summary
Short summary
We used outputs from nine models to better understand land-atmosphere CO2 exchanges across Northern Eurasia over the period 1960-1990. Model estimates were assessed against independent ground and satellite measurements. We find that the models show a weakening of the CO2 sink over time; the models tend to overestimate respiration, causing an underestimate in NEP; the model range in regional NEP is twice the multimodel mean. Residence time for soil carbon decreased, amid a gain in carbon storage.
W. R. Wieder, A. S. Grandy, C. M. Kallenbach, P. G. Taylor, and G. B. Bonan
Geosci. Model Dev., 8, 1789–1808, https://doi.org/10.5194/gmd-8-1789-2015, https://doi.org/10.5194/gmd-8-1789-2015, 2015
Short summary
Short summary
Projecting biogeochemical responses to environmental change requires multi-scaled perspectives. However, microbes, the drivers of soil organic matter decomposition and stabilization, remain notably absent from models used to project carbon cycle–climate feedbacks. Here, we apply and evaluate representations of microbial functional diversity across scales and find that such representations may be critical to accurately project soil carbon dynamics in a changing world.
S. Veraverbeke, B. M. Rogers, and J. T. Randerson
Biogeosciences, 12, 3579–3601, https://doi.org/10.5194/bg-12-3579-2015, https://doi.org/10.5194/bg-12-3579-2015, 2015
Short summary
Short summary
We developed a statistical model of daily carbon consumption by fire for Alaska at 450m resolution between 2001 and 2012. We used field measurements from black spruce forests in Alaska to build nonlinear multiplicative models predicting carbon consumption by fire in response to environmental variables. Our analysis highlights the importance of accounting for the spatial heterogeneity within fuels and consumption when extrapolating emissions in space and time.
C. Le Quéré, R. Moriarty, R. M. Andrew, G. P. Peters, P. Ciais, P. Friedlingstein, S. D. Jones, S. Sitch, P. Tans, A. Arneth, T. A. Boden, L. Bopp, Y. Bozec, J. G. Canadell, L. P. Chini, F. Chevallier, C. E. Cosca, I. Harris, M. Hoppema, R. A. Houghton, J. I. House, A. K. Jain, T. Johannessen, E. Kato, R. F. Keeling, V. Kitidis, K. Klein Goldewijk, C. Koven, C. S. Landa, P. Landschützer, A. Lenton, I. D. Lima, G. Marland, J. T. Mathis, N. Metzl, Y. Nojiri, A. Olsen, T. Ono, S. Peng, W. Peters, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. E. Salisbury, U. Schuster, J. Schwinger, R. Séférian, J. Segschneider, T. Steinhoff, B. D. Stocker, A. J. Sutton, T. Takahashi, B. Tilbrook, G. R. van der Werf, N. Viovy, Y.-P. Wang, R. Wanninkhof, A. Wiltshire, and N. Zeng
Earth Syst. Sci. Data, 7, 47–85, https://doi.org/10.5194/essd-7-47-2015, https://doi.org/10.5194/essd-7-47-2015, 2015
Short summary
Short summary
Carbon dioxide (CO2) emissions from human activities (burning fossil fuels and cement production, deforestation and other land-use change) are set to rise again in 2014.
This study (updated yearly) makes an accurate assessment of anthropogenic CO2 emissions and their redistribution between the atmosphere, ocean, and terrestrial biosphere in order to better understand the global carbon cycle, support the development of climate policies, and project future climate change.
A. C. Spessa, R. D. Field, F. Pappenberger, A. Langner, S. Englhart, U. Weber, T. Stockdale, F. Siegert, J. W. Kaiser, and J. Moore
Nat. Hazards Earth Syst. Sci., 15, 429–442, https://doi.org/10.5194/nhess-15-429-2015, https://doi.org/10.5194/nhess-15-429-2015, 2015
S. Sitch, P. Friedlingstein, N. Gruber, S. D. Jones, G. Murray-Tortarolo, A. Ahlström, S. C. Doney, H. Graven, C. Heinze, C. Huntingford, S. Levis, P. E. Levy, M. Lomas, B. Poulter, N. Viovy, S. Zaehle, N. Zeng, A. Arneth, G. Bonan, L. Bopp, J. G. Canadell, F. Chevallier, P. Ciais, R. Ellis, M. Gloor, P. Peylin, S. L. Piao, C. Le Quéré, B. Smith, Z. Zhu, and R. Myneni
Biogeosciences, 12, 653–679, https://doi.org/10.5194/bg-12-653-2015, https://doi.org/10.5194/bg-12-653-2015, 2015
B. Bond-Lamberty, J. P. Fisk, J. A. Holm, V. Bailey, G. Bohrer, and C. M. Gough
Biogeosciences, 12, 513–526, https://doi.org/10.5194/bg-12-513-2015, https://doi.org/10.5194/bg-12-513-2015, 2015
Short summary
Short summary
How will aging forests behave as they undergo ecological transitions? Can our models, which support scientific, policy, and management analyses, accurately simulate these transitions? We tested whether three forest ecosystem models could reproduce dynamics observed in an experimentally manipulated forest in northern Michigan, USA. None of the models fully captured the post-disturbance C fluxes observed, raising doubts about their ability to simulate tree death after moderate disturbances.
R. G. Knox, M. Longo, A. L. S. Swann, K. Zhang, N. M. Levine, P. R. Moorcroft, and R. L. Bras
Hydrol. Earth Syst. Sci., 19, 241–273, https://doi.org/10.5194/hess-19-241-2015, https://doi.org/10.5194/hess-19-241-2015, 2015
E. Joetzjer, C. Delire, H. Douville, P. Ciais, B. Decharme, R. Fisher, B. Christoffersen, J. C. Calvet, A. C. L. da Costa, L. V. Ferreira, and P. Meir
Geosci. Model Dev., 7, 2933–2950, https://doi.org/10.5194/gmd-7-2933-2014, https://doi.org/10.5194/gmd-7-2933-2014, 2014
G. Hugelius, J. Strauss, S. Zubrzycki, J. W. Harden, E. A. G. Schuur, C.-L. Ping, L. Schirrmeister, G. Grosse, G. J. Michaelson, C. D. Koven, J. A. O'Donnell, B. Elberling, U. Mishra, P. Camill, Z. Yu, J. Palmtag, and P. Kuhry
Biogeosciences, 11, 6573–6593, https://doi.org/10.5194/bg-11-6573-2014, https://doi.org/10.5194/bg-11-6573-2014, 2014
Short summary
Short summary
This study provides an updated estimate of organic carbon stored in the northern permafrost region. The study includes estimates for carbon in soils (0 to 3 m depth) and deeper sediments in river deltas and the Yedoma region. We find that field data is still scarce from many regions. Total estimated carbon storage is ~1300 Pg with an uncertainty range of between 1100 and 1500 Pg. Around 800 Pg carbon is perennially frozen, equivalent to all carbon dioxide currently in the Earth's atmosphere.
J. A. Holm, J. Q. Chambers, W. D. Collins, and N. Higuchi
Biogeosciences, 11, 5773–5794, https://doi.org/10.5194/bg-11-5773-2014, https://doi.org/10.5194/bg-11-5773-2014, 2014
G. B. Bonan, M. Williams, R. A. Fisher, and K. W. Oleson
Geosci. Model Dev., 7, 2193–2222, https://doi.org/10.5194/gmd-7-2193-2014, https://doi.org/10.5194/gmd-7-2193-2014, 2014
J. A. Holm, K. Jardine, A. B. Guenther, J. Q. Chambers, and E. Tribuzy
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acpd-14-23995-2014, https://doi.org/10.5194/acpd-14-23995-2014, 2014
Revised manuscript not accepted
W. R. Wieder, A. S. Grandy, C. M. Kallenbach, and G. B. Bonan
Biogeosciences, 11, 3899–3917, https://doi.org/10.5194/bg-11-3899-2014, https://doi.org/10.5194/bg-11-3899-2014, 2014
C. Le Quéré, G. P. Peters, R. J. Andres, R. M. Andrew, T. A. Boden, P. Ciais, P. Friedlingstein, R. A. Houghton, G. Marland, R. Moriarty, S. Sitch, P. Tans, A. Arneth, A. Arvanitis, D. C. E. Bakker, L. Bopp, J. G. Canadell, L. P. Chini, S. C. Doney, A. Harper, I. Harris, J. I. House, A. K. Jain, S. D. Jones, E. Kato, R. F. Keeling, K. Klein Goldewijk, A. Körtzinger, C. Koven, N. Lefèvre, F. Maignan, A. Omar, T. Ono, G.-H. Park, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. Schwinger, J. Segschneider, B. D. Stocker, T. Takahashi, B. Tilbrook, S. van Heuven, N. Viovy, R. Wanninkhof, A. Wiltshire, and S. Zaehle
Earth Syst. Sci. Data, 6, 235–263, https://doi.org/10.5194/essd-6-235-2014, https://doi.org/10.5194/essd-6-235-2014, 2014
S. Levis, M. D. Hartman, and G. B. Bonan
Geosci. Model Dev., 7, 613–620, https://doi.org/10.5194/gmd-7-613-2014, https://doi.org/10.5194/gmd-7-613-2014, 2014
G. Hugelius, J. G. Bockheim, P. Camill, B. Elberling, G. Grosse, J. W. Harden, K. Johnson, T. Jorgenson, C. D. Koven, P. Kuhry, G. Michaelson, U. Mishra, J. Palmtag, C.-L. Ping, J. O'Donnell, L. Schirrmeister, E. A. G. Schuur, Y. Sheng, L. C. Smith, J. Strauss, and Z. Yu
Earth Syst. Sci. Data, 5, 393–402, https://doi.org/10.5194/essd-5-393-2013, https://doi.org/10.5194/essd-5-393-2013, 2013
R. G. Knox, M. Longo, A. L. S. Swann, K. Zhang, N. M. Levine, P. R. Moorcroft, and R. L. Bras
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hessd-10-15295-2013, https://doi.org/10.5194/hessd-10-15295-2013, 2013
Preprint withdrawn
C. D. Koven, W. J. Riley, Z. M. Subin, J. Y. Tang, M. S. Torn, W. D. Collins, G. B. Bonan, D. M. Lawrence, and S. C. Swenson
Biogeosciences, 10, 7109–7131, https://doi.org/10.5194/bg-10-7109-2013, https://doi.org/10.5194/bg-10-7109-2013, 2013
D. Lombardozzi, J. P. Sparks, and G. Bonan
Biogeosciences, 10, 6815–6831, https://doi.org/10.5194/bg-10-6815-2013, https://doi.org/10.5194/bg-10-6815-2013, 2013
Q. Zhang, A. J. Pitman, Y. P. Wang, Y. J. Dai, and P. J. Lawrence
Earth Syst. Dynam., 4, 333–345, https://doi.org/10.5194/esd-4-333-2013, https://doi.org/10.5194/esd-4-333-2013, 2013
R. Q. Thomas, G. B. Bonan, and C. L. Goodale
Biogeosciences, 10, 3869–3887, https://doi.org/10.5194/bg-10-3869-2013, https://doi.org/10.5194/bg-10-3869-2013, 2013
N. A. Rosenbloom, B. L. Otto-Bliesner, E. C. Brady, and P. J. Lawrence
Geosci. Model Dev., 6, 549–561, https://doi.org/10.5194/gmd-6-549-2013, https://doi.org/10.5194/gmd-6-549-2013, 2013
J. F. Tjiputra, C. Roelandt, M. Bentsen, D. M. Lawrence, T. Lorentzen, J. Schwinger, Ø. Seland, and C. Heinze
Geosci. Model Dev., 6, 301–325, https://doi.org/10.5194/gmd-6-301-2013, https://doi.org/10.5194/gmd-6-301-2013, 2013
B. M. Rogers, J. T. Randerson, and G. B. Bonan
Biogeosciences, 10, 699–718, https://doi.org/10.5194/bg-10-699-2013, https://doi.org/10.5194/bg-10-699-2013, 2013
J. Y. Tang, W. J. Riley, C. D. Koven, and Z. M. Subin
Geosci. Model Dev., 6, 127–140, https://doi.org/10.5194/gmd-6-127-2013, https://doi.org/10.5194/gmd-6-127-2013, 2013
S. Valcke, V. Balaji, A. Craig, C. DeLuca, R. Dunlap, R. W. Ford, R. Jacob, J. Larson, R. O'Kuinghttons, G. D. Riley, and M. Vertenstein
Geosci. Model Dev., 5, 1589–1596, https://doi.org/10.5194/gmd-5-1589-2012, https://doi.org/10.5194/gmd-5-1589-2012, 2012
Related subject area
Biogeosciences
Sources of uncertainty in the SPITFIRE global fire model: development of LPJmL-SPITFIRE1.9 and directions for future improvements
The unicellular NUM v.0.91: a trait-based plankton model evaluated in two contrasting biogeographic provinces
FESOM2.1-REcoM3-MEDUSA2: an ocean–sea ice–biogeochemistry model coupled to a sediment model
Satellite-based modeling of wetland methane emissions on a global scale (SatWetCH4 1.0)
Systematic underestimation of type-specific ecosystem process variability in the Community Land Model v5 over Europe
Soil nitrous oxide emissions from global land ecosystems and their drivers within the LPJ-GUESS model (v4.1)
Lambda-PFLOTRAN 1.0: a workflow for incorporating organic matter chemistry informed by ultra high resolution mass spectrometry into biogeochemical modeling
An improved model for air–sea exchange of elemental mercury in MITgcm-ECCOv4-Hg: the role of surfactants and waves
BOATSv2: new ecological and economic features improve simulations of high seas catch and effort
A dynamical process-based model for quantifying global agricultural ammonia emissions – AMmonia–CLIMate v1.0 (AMCLIM v1.0) – Part 1: Land module for simulating emissions from synthetic fertilizer use
Simulating Ips typographus L. outbreak dynamics and their influence on carbon balance estimates with ORCHIDEE r8627
Biological nitrogen fixation of natural and agricultural vegetation simulated with LPJmL 5.7.9
Learning from conceptual models – a study of the emergence of cooperation towards resource protection in a social–ecological system
The biogeochemical model Biome-BGCMuSo v6.2 provides plausible and accurate simulations of the carbon cycle in central European beech forests
Parameterisation toolbox for physical-biogeochemical model compatible with FABM. Case study: the coupled 1D GOTM-ECOSMO E2E for the Sylt-Romo Bight, North Sea
China Wildfire Emission (ChinaWED v1) for the period 2012–2022
H2MV (v1.0): Global Physically-Constrained Deep Learning Water Cycle Model with Vegetation
DeepPhenoMem V1.0: deep learning modelling of canopy greenness dynamics accounting for multi-variate meteorological memory effects on vegetation phenology
Impacts of land-use change on biospheric carbon: an oriented benchmark using the ORCHIDEE land surface model
Including the Phosphorus cycle into the LPJ-GUESS Dynamic Global Vegetation Model (v4.1, r10994) – Global patterns and temporal trends of N and P primary production limitation
Implementing the iCORAL (version 1.0) coral reef CaCO3 production module in the iLOVECLIM climate model
Assimilation of carbonyl sulfide (COS) fluxes within the adjoint-based data assimilation system – Nanjing University Carbon Assimilation System (NUCAS v1.0)
Alquimia v1.0: A generic interface to biogeochemical codes – A tool for interoperable development, prototyping and benchmarking for multiphysics simulators
Quantifying the role of ozone-caused damage to vegetation in the Earth system: a new parameterization scheme for photosynthetic and stomatal responses
Radiocarbon analysis reveals underestimation of soil organic carbon persistence in new-generation soil models
Exploring the potential of history matching for land surface model calibration
EAT v1.0.0: a 1D test bed for physical–biogeochemical data assimilation in natural waters
Using deep learning to integrate paleoclimate and global biogeochemistry over the Phanerozoic Eon
A comprehensive land surface vegetation model for multi-stream data assimilation, D&B v1.0
Modelling boreal forest's mineral soil and peat C dynamics with the Yasso07 model coupled with the Ricker moisture modifier
Process-based Modeling of Solar-induced Chlorophyll Fluorescence with VISIT-SIF version 1.0
Dynamic ecosystem assembly and escaping the “fire trap” in the tropics: insights from FATES_15.0.0
NN-TOC v1: global prediction of total organic carbon in marine sediments using deep neural networks
In silico calculation of soil pH by SCEPTER v1.0
Simple process-led algorithms for simulating habitats (SPLASH v.2.0): robust calculations of water and energy fluxes
A global behavioural model of human fire use and management: WHAM! v1.0
Terrestrial Ecosystem Model in R (TEMIR) version 1.0: simulating ecophysiological responses of vegetation to atmospheric chemical and meteorological changes
biospheremetrics v1.0.2: an R package to calculate two complementary terrestrial biosphere integrity indicators – human colonization of the biosphere (BioCol) and risk of ecosystem destabilization (EcoRisk)
Modeling boreal forest soil dynamics with the microbially explicit soil model MIMICS+ (v1.0)
Optimal enzyme allocation leads to the constrained enzyme hypothesis: the Soil Enzyme Steady Allocation Model (SESAM; v3.1)
Implementing a dynamic representation of fire and harvest including subgrid-scale heterogeneity in the tile-based land surface model CLASSIC v1.45
Inferring the tree regeneration niche from inventory data using a dynamic forest model
Optimising CH4 simulations from the LPJ-GUESS model v4.1 using an adaptive Markov chain Monte Carlo algorithm
The XSO framework (v0.1) and Phydra library (v0.1) for a flexible, reproducible, and integrated plankton community modeling environment in Python
AgriCarbon-EO v1.0.1: large-scale and high-resolution simulation of carbon fluxes by assimilation of Sentinel-2 and Landsat-8 reflectances using a Bayesian approach
SAMM version 1.0: a numerical model for microbial- mediated soil aggregate formation
A model of the within-population variability of budburst in forest trees
Computationally efficient parameter estimation for high-dimensional ocean biogeochemical models
The community-centered freshwater biogeochemistry model unified RIVE v1.0: a unified version for water column
Observation-based sowing dates and cultivars significantly affect yield and irrigation for some crops in the Community Land Model (CLM5)
Luke Oberhagemann, Maik Billing, Werner von Bloh, Markus Drüke, Matthew Forrest, Simon P. K. Bowring, Jessica Hetzer, Jaime Ribalaygua Batalla, and Kirsten Thonicke
Geosci. Model Dev., 18, 2021–2050, https://doi.org/10.5194/gmd-18-2021-2025, https://doi.org/10.5194/gmd-18-2021-2025, 2025
Short summary
Short summary
Under climate change, the conditions necessary for wildfires to form are occurring more frequently in many parts of the world. To help predict how wildfires will change in future, global fire models are being developed. We analyze and further develop one such model, SPITFIRE. Our work identifies and corrects sources of substantial bias in the model that are important to the global fire modelling field. With this analysis and these developments, we help to provide a basis for future improvements.
Trine Frisbæk Hansen, Donald Eugene Canfield, Ken Haste Andersen, and Christian Jannik Bjerrum
Geosci. Model Dev., 18, 1895–1916, https://doi.org/10.5194/gmd-18-1895-2025, https://doi.org/10.5194/gmd-18-1895-2025, 2025
Short summary
Short summary
We describe and test the size-based Nutrient-Unicellular-Multicellular model, which defines unicellular plankton using a single set of parameters, on a eutrophic and oligotrophic ecosystem. The results demonstrate that both sites can be modeled with similar parameters and robust performance over a wide range of parameters. The study shows that the model is useful for non-experts and applicable for modeling ecosystems with limited data. It holds promise for evolutionary and deep-time climate models.
Ying Ye, Guy Munhoven, Peter Köhler, Martin Butzin, Judith Hauck, Özgür Gürses, and Christoph Völker
Geosci. Model Dev., 18, 977–1000, https://doi.org/10.5194/gmd-18-977-2025, https://doi.org/10.5194/gmd-18-977-2025, 2025
Short summary
Short summary
Many biogeochemistry models assume all material reaching the seafloor is remineralized and returned to solution, which is sufficient for studies on short-term climate change. Under long-term climate change, the carbon storage in sediments slows down carbon cycling and influences feedbacks in the atmosphere–ocean–sediment system. This paper describes the coupling of a sediment model to an ocean biogeochemistry model and presents results under the pre-industrial climate and under CO2 perturbation.
Juliette Bernard, Elodie Salmon, Marielle Saunois, Shushi Peng, Penélope Serrano-Ortiz, Antoine Berchet, Palingamoorthy Gnanamoorthy, Joachim Jansen, and Philippe Ciais
Geosci. Model Dev., 18, 863–883, https://doi.org/10.5194/gmd-18-863-2025, https://doi.org/10.5194/gmd-18-863-2025, 2025
Short summary
Short summary
Despite their importance, uncertainties remain in the evaluation of the drivers of temporal variability of methane emissions from wetlands on a global scale. Here, a simplified global model is developed, taking advantage of advances in remote-sensing data and in situ observations. The model reproduces the large spatial and temporal patterns of emissions, albeit with limitations in the tropics due to data scarcity. This model, while simple, can provide valuable insights into sensitivity analyses.
Christian Poppe Terán, Bibi S. Naz, Harry Vereecken, Roland Baatz, Rosie A. Fisher, and Harrie-Jan Hendricks Franssen
Geosci. Model Dev., 18, 287–317, https://doi.org/10.5194/gmd-18-287-2025, https://doi.org/10.5194/gmd-18-287-2025, 2025
Short summary
Short summary
Carbon and water exchanges between the atmosphere and the land surface contribute to water resource availability and climate change mitigation. Land surface models, like the Community Land Model version 5 (CLM5), simulate these. This study finds that CLM5 and other data sets underestimate the magnitudes of and variability in carbon and water exchanges for the most abundant plant functional types compared to observations. It provides essential insights for further research into these processes.
Jianyong Ma, Almut Arneth, Benjamin Smith, Peter Anthoni, Xu-Ri, Peter Eliasson, David Wårlind, Martin Wittenbrink, and Stefan Olin
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-223, https://doi.org/10.5194/gmd-2024-223, 2024
Revised manuscript accepted for GMD
Short summary
Short summary
Nitrous oxide (N2O) is a powerful greenhouse gas mainly released from natural and agricultural soils. This study examines how global soil N2O emissions have changed from 1961 to 2020 and identifies key factors driving these changes using an ecological model. The findings highlight croplands as the largest source, with factors like fertilizer use and climate change enhancing emissions. Rising CO2 levels, however, can partially mitigate N2O emissions through increased plant nitrogen uptake.
Katherine A. Muller, Peishi Jiang, Glenn Hammond, Tasneem Ahmadullah, Hyun-Seob Song, Ravi Kukkadapu, Nicholas Ward, Madison Bowe, Rosalie K. Chu, Qian Zhao, Vanessa A. Garayburu-Caruso, Alan Roebuck, and Xingyuan Chen
Geosci. Model Dev., 17, 8955–8968, https://doi.org/10.5194/gmd-17-8955-2024, https://doi.org/10.5194/gmd-17-8955-2024, 2024
Short summary
Short summary
The new Lambda-PFLOTRAN workflow incorporates organic matter chemistry into reaction networks to simulate aerobic respiration and biogeochemistry. Lambda-PFLOTRAN is a Python-based workflow in a Jupyter notebook interface that digests raw organic matter chemistry data via Fourier transform ion cyclotron resonance mass spectrometry, develops a representative reaction network, and completes a biogeochemical simulation with the open-source, parallel-reactive-flow, and transport code PFLOTRAN.
Ling Li, Peipei Wu, Peng Zhang, Shaojian Huang, and Yanxu Zhang
Geosci. Model Dev., 17, 8683–8695, https://doi.org/10.5194/gmd-17-8683-2024, https://doi.org/10.5194/gmd-17-8683-2024, 2024
Short summary
Short summary
In this study, we incorporate sea surfactants and wave-breaking processes into MITgcm-ECCOv4-Hg. The updated model shows increased fluxes in high-wind-speed and high-wave regions and vice versa, enhancing spatial heterogeneity. It shows that elemental mercury (Hg0) transfer velocity is more sensitive to wind speed. These findings may elucidate the discrepancies in previous estimations and offer insights into global Hg cycling.
Jerome Guiet, Daniele Bianchi, Kim J. N. Scherrer, Ryan F. Heneghan, and Eric D. Galbraith
Geosci. Model Dev., 17, 8421–8454, https://doi.org/10.5194/gmd-17-8421-2024, https://doi.org/10.5194/gmd-17-8421-2024, 2024
Short summary
Short summary
The BiOeconomic mArine Trophic Size-spectrum (BOATSv2) model dynamically simulates global commercial fish populations and their coupling with fishing activity, as emerging from environmental and economic drivers. New features, including separate pelagic and demersal populations, iron limitation, and spatial variation of fishing costs and management, improve the accuracy of high seas fisheries. The updated model code is available to simulate both historical and future scenarios.
Jize Jiang, David S. Stevenson, and Mark A. Sutton
Geosci. Model Dev., 17, 8181–8222, https://doi.org/10.5194/gmd-17-8181-2024, https://doi.org/10.5194/gmd-17-8181-2024, 2024
Short summary
Short summary
A special model called AMmonia–CLIMate (AMCLIM) has been developed to understand and calculate NH3 emissions from fertilizer use and also taking into account how the environment influences these NH3 emissions. It is estimated that about 17 % of applied N in fertilizers was lost due to NH3 emissions. Hot and dry conditions and regions with high-pH soils can expect higher NH3 emissions.
Guillaume Marie, Jina Jeong, Hervé Jactel, Gunnar Petter, Maxime Cailleret, Matthew J. McGrath, Vladislav Bastrikov, Josefine Ghattas, Bertrand Guenet, Anne Sofie Lansø, Kim Naudts, Aude Valade, Chao Yue, and Sebastiaan Luyssaert
Geosci. Model Dev., 17, 8023–8047, https://doi.org/10.5194/gmd-17-8023-2024, https://doi.org/10.5194/gmd-17-8023-2024, 2024
Short summary
Short summary
This research looks at how climate change influences forests, and particularly how altered wind and insect activities could make forests emit instead of absorb carbon. We have updated a land surface model called ORCHIDEE to better examine the effect of bark beetles on forest health. Our findings suggest that sudden events, such as insect outbreaks, can dramatically affect carbon storage, offering crucial insights into tackling climate change.
Stephen Björn Wirth, Johanna Braun, Jens Heinke, Sebastian Ostberg, Susanne Rolinski, Sibyll Schaphoff, Fabian Stenzel, Werner von Bloh, Friedhelm Taube, and Christoph Müller
Geosci. Model Dev., 17, 7889–7914, https://doi.org/10.5194/gmd-17-7889-2024, https://doi.org/10.5194/gmd-17-7889-2024, 2024
Short summary
Short summary
We present a new approach to modelling biological nitrogen fixation (BNF) in the Lund–Potsdam–Jena managed Land dynamic global vegetation model. While in the original approach BNF depended on actual evapotranspiration, the new approach considers soil water content and temperature, vertical root distribution, the nitrogen (N) deficit and carbon (C) costs. The new approach improved simulated BNF compared to the scientific literature and the model ability to project future C and N cycle dynamics.
Saeed Harati-Asl, Liliana Perez, and Roberto Molowny-Horas
Geosci. Model Dev., 17, 7423–7443, https://doi.org/10.5194/gmd-17-7423-2024, https://doi.org/10.5194/gmd-17-7423-2024, 2024
Short summary
Short summary
Social–ecological systems are the subject of many sustainability problems. Because of the complexity of these systems, we must be careful when intervening in them; otherwise we may cause irreversible damage. Using computer models, we can gain insight about these complex systems without harming them. In this paper we describe how we connected an ecological model of forest insect infestation with a social model of cooperation and simulated an intervention measure to save a forest from infestation.
Katarína Merganičová, Ján Merganič, Laura Dobor, Roland Hollós, Zoltán Barcza, Dóra Hidy, Zuzana Sitková, Pavel Pavlenda, Hrvoje Marjanovic, Daniel Kurjak, Michal Bošel'a, Doroteja Bitunjac, Maša Zorana Ostrogović Sever, Jiří Novák, Peter Fleischer, and Tomáš Hlásny
Geosci. Model Dev., 17, 7317–7346, https://doi.org/10.5194/gmd-17-7317-2024, https://doi.org/10.5194/gmd-17-7317-2024, 2024
Short summary
Short summary
We developed a multi-objective calibration approach leading to robust parameter values aiming to strike a balance between their local precision and broad applicability. Using the Biome-BGCMuSo model, we tested the calibrated parameter sets for simulating European beech forest dynamics across large environmental gradients. Leveraging data from 87 plots and five European countries, the results demonstrated reasonable local accuracy and plausible large-scale productivity responses.
Hoa T. T. Nguyen, Ute Daewel, Neil Banas, and Corinna Schrum
EGUsphere, https://doi.org/10.5194/egusphere-2024-2710, https://doi.org/10.5194/egusphere-2024-2710, 2024
Short summary
Short summary
Parameterisation is key in modeling to reproduce observations well but is often done manually. This study presents a Particle Swarm Optimizer-based toolbox for marine ecosystem models, compatible with the Framework for Aquatic Biogeochemical Models, thus enhancing its reusability. Applied to the Sylt ecosystem, the toolbox effectively (1) identified multiple parameter sets that matched observations well, thus providing different insights into ecosystem dynamics, (2) optimized model complexity.
Zhengyang Lin, Ling Huang, Hanqin Tian, Anping Chen, and Xuhui Wang
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-170, https://doi.org/10.5194/gmd-2024-170, 2024
Revised manuscript accepted for GMD
Short summary
Short summary
Wildfires release large amounts of greenhouse gases, contributing to global warming. We developed a new model that provides near-real-time estimates of wildfire emissions in China. Our model improves the accuracy of burned area measurements and incorporates advanced data in fuel loads and emission factors. We found that most emissions come from agricultural fires, while emissions from forests and grasslands are decreasing. This model will help reduce the environmental impacts of wildfires.
Zavud Baghirov, Martin Jung, Markus Reichstein, Marco Körner, and Basil Kraft
EGUsphere, https://doi.org/10.5194/egusphere-2024-2044, https://doi.org/10.5194/egusphere-2024-2044, 2024
Short summary
Short summary
We use an innovative approach to study the Earth's water cycle by blending advanced computer learning techniques with a traditional water cycle model. We developed a model that learns from meteorological data, with a special focus on understanding how vegetation influences water movement. Our model closely aligns with real-world observations, yet there are areas that need improvement. This study opens up new possibilities to better understand the water cycle and its interactions with vegetation.
Guohua Liu, Mirco Migliavacca, Christian Reimers, Basil Kraft, Markus Reichstein, Andrew D. Richardson, Lisa Wingate, Nicolas Delpierre, Hui Yang, and Alexander J. Winkler
Geosci. Model Dev., 17, 6683–6701, https://doi.org/10.5194/gmd-17-6683-2024, https://doi.org/10.5194/gmd-17-6683-2024, 2024
Short summary
Short summary
Our study employs long short-term memory (LSTM) networks to model canopy greenness and phenology, integrating meteorological memory effects. The LSTM model outperforms traditional methods, enhancing accuracy in predicting greenness dynamics and phenological transitions across plant functional types. Highlighting the importance of multi-variate meteorological memory effects, our research pioneers unlock the secrets of vegetation phenology responses to climate change with deep learning techniques.
Thi Lan Anh Dinh, Daniel Goll, Philippe Ciais, and Ronny Lauerwald
Geosci. Model Dev., 17, 6725–6744, https://doi.org/10.5194/gmd-17-6725-2024, https://doi.org/10.5194/gmd-17-6725-2024, 2024
Short summary
Short summary
The study assesses the performance of the dynamic global vegetation model (DGVM) ORCHIDEE in capturing the impact of land-use change on carbon stocks across Europe. Comparisons with observations reveal that the model accurately represents carbon fluxes and stocks. Despite the underestimations in certain land-use conversions, the model describes general trends in soil carbon response to land-use change, aligning with the site observations.
Mateus Dantas de Paula, Matthew Forrest, David Warlind, João Paulo Darela Filho, Katrin Fleischer, Anja Rammig, and Thomas Hickler
EGUsphere, https://doi.org/10.5194/egusphere-2024-2592, https://doi.org/10.5194/egusphere-2024-2592, 2024
Short summary
Short summary
Our study maps global nitrogen (N) and phosphorus (P) availability and how they’ve changed from 1901 to 2018. We found that tropical regions are mostly P-limited, while temperate and boreal areas face N limitations. Over time, P limitation has increased, especially in the tropics, while N limitation has decreased. These shifts are key to understanding global plant growth and carbon storage, highlighting the importance of including P dynamics in ecosystem models.
Nathaelle Bouttes, Lester Kwiatkowski, Manon Berger, Victor Brovkin, and Guy Munhoven
Geosci. Model Dev., 17, 6513–6528, https://doi.org/10.5194/gmd-17-6513-2024, https://doi.org/10.5194/gmd-17-6513-2024, 2024
Short summary
Short summary
Coral reefs are crucial for biodiversity, but they also play a role in the carbon cycle on long time scales of a few thousand years. To better simulate the future and past evolution of coral reefs and their effect on the global carbon cycle, hence on atmospheric CO2 concentration, it is necessary to include coral reefs within a climate model. Here we describe the inclusion of coral reef carbonate production in a carbon–climate model and its validation in comparison to existing modern data.
Huajie Zhu, Mousong Wu, Fei Jiang, Michael Vossbeck, Thomas Kaminski, Xiuli Xing, Jun Wang, Weimin Ju, and Jing M. Chen
Geosci. Model Dev., 17, 6337–6363, https://doi.org/10.5194/gmd-17-6337-2024, https://doi.org/10.5194/gmd-17-6337-2024, 2024
Short summary
Short summary
In this work, we developed the Nanjing University Carbon Assimilation System (NUCAS v1.0). Data assimilation experiments were conducted to demonstrate the robustness and investigate the feasibility and applicability of NUCAS. The assimilation of ecosystem carbonyl sulfide (COS) fluxes improved the model performance in gross primary productivity, evapotranspiration, and sensible heat, showing that COS provides constraints on parameters relevant to carbon-, water-, and energy-related processes.
Sergi Molins, Benjamin Andre, Jeffrey Johnson, Glenn Hammond, Benjamin Sulman, Konstantin Lipnikov, Marcus Day, James Beisman, Daniil Svyatsky, Hang Deng, Peter Lichtner, Carl Steefel, and David Moulton
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-108, https://doi.org/10.5194/gmd-2024-108, 2024
Revised manuscript accepted for GMD
Short summary
Short summary
Developing scientific software and making sure it functions properly requires a significant effort. As we advance our understanding of natural systems, however, there is the need to develop yet more complex models and codes. In this work, we present a piece of software that facilitates this work, specifically with regard to reactive processes. Existing tried-and-true codes are made available via this new interface, freeing up resources to focus on the new aspects of the problems at hand.
Fang Li, Zhimin Zhou, Samuel Levis, Stephen Sitch, Felicity Hayes, Zhaozhong Feng, Peter B. Reich, Zhiyi Zhao, and Yanqing Zhou
Geosci. Model Dev., 17, 6173–6193, https://doi.org/10.5194/gmd-17-6173-2024, https://doi.org/10.5194/gmd-17-6173-2024, 2024
Short summary
Short summary
A new scheme is developed to model the surface ozone damage to vegetation in regional and global process-based models. Based on 4210 data points from ozone experiments, it accurately reproduces statistically significant linear or nonlinear photosynthetic and stomatal responses to ozone in observations for all vegetation types. It also enables models to implicitly capture the variability in plant ozone tolerance and the shift among species within a vegetation type.
Alexander S. Brunmayr, Frank Hagedorn, Margaux Moreno Duborgel, Luisa I. Minich, and Heather D. Graven
Geosci. Model Dev., 17, 5961–5985, https://doi.org/10.5194/gmd-17-5961-2024, https://doi.org/10.5194/gmd-17-5961-2024, 2024
Short summary
Short summary
A new generation of soil models promises to more accurately predict the carbon cycle in soils under climate change. However, measurements of 14C (the radioactive carbon isotope) in soils reveal that the new soil models face similar problems to the traditional models: they underestimate the residence time of carbon in soils and may therefore overestimate the net uptake of CO2 by the land ecosystem. Proposed solutions include restructuring the models and calibrating model parameters with 14C data.
Nina Raoult, Simon Beylat, James M. Salter, Frédéric Hourdin, Vladislav Bastrikov, Catherine Ottlé, and Philippe Peylin
Geosci. Model Dev., 17, 5779–5801, https://doi.org/10.5194/gmd-17-5779-2024, https://doi.org/10.5194/gmd-17-5779-2024, 2024
Short summary
Short summary
We use computer models to predict how the land surface will respond to climate change. However, these complex models do not always simulate what we observe in real life, limiting their effectiveness. To improve their accuracy, we use sophisticated statistical and computational techniques. We test a technique called history matching against more common approaches. This method adapts well to these models, helping us better understand how they work and therefore how to make them more realistic.
Jorn Bruggeman, Karsten Bolding, Lars Nerger, Anna Teruzzi, Simone Spada, Jozef Skákala, and Stefano Ciavatta
Geosci. Model Dev., 17, 5619–5639, https://doi.org/10.5194/gmd-17-5619-2024, https://doi.org/10.5194/gmd-17-5619-2024, 2024
Short summary
Short summary
To understand and predict the ocean’s capacity for carbon sequestration, its ability to supply food, and its response to climate change, we need the best possible estimate of its physical and biogeochemical properties. This is obtained through data assimilation which blends numerical models and observations. We present the Ensemble and Assimilation Tool (EAT), a flexible and efficient test bed that allows any scientist to explore and further develop the state of the art in data assimilation.
Dongyu Zheng, Andrew S. Merdith, Yves Goddéris, Yannick Donnadieu, Khushboo Gurung, and Benjamin J. W. Mills
Geosci. Model Dev., 17, 5413–5429, https://doi.org/10.5194/gmd-17-5413-2024, https://doi.org/10.5194/gmd-17-5413-2024, 2024
Short summary
Short summary
This study uses a deep learning method to upscale the time resolution of paleoclimate simulations to 1 million years. This improved resolution allows a climate-biogeochemical model to more accurately predict climate shifts. The method may be critical in developing new fully continuous methods that are able to be applied over a moving continental surface in deep time with high resolution at reasonable computational expense.
Wolfgang Knorr, Matthew Williams, Tea Thum, Thomas Kaminski, Michael Voßbeck, Marko Scholze, Tristan Quaife, Luke Smallmann, Susan Steele-Dunne, Mariette Vreugdenhil, Tim Green, Sönke Zähle, Mika Aurela, Alexandre Bouvet, Emanuel Bueechi, Wouter Dorigo, Tarek El-Madany, Mirco Migliavacca, Marika Honkanen, Yann Kerr, Anna Kontu, Juha Lemmetyinen, Hannakaisa Lindqvist, Arnaud Mialon, Tuuli Miinalainen, Gaetan Pique, Amanda Ojasalo, Shaun Quegan, Peter Rayner, Pablo Reyes-Muñoz, Nemesio Rodríguez-Fernández, Mike Schwank, Jochem Verrelst, Songyan Zhu, Dirk Schüttemeyer, and Matthias Drusch
EGUsphere, https://doi.org/10.5194/egusphere-2024-1534, https://doi.org/10.5194/egusphere-2024-1534, 2024
Short summary
Short summary
When it comes to climate change, the land surfaces are where the vast majority of impacts happen. The task of monitoring those across the globe is formidable and must necessarily rely on satellites – at a significant cost: the measurements are only indirect and require comprehensive physical understanding. We have created a comprehensive modelling system that we offer to the research community to explore how satellite data can be better exploited to help us see what changes on our lands.
Boris Ťupek, Aleksi Lehtonen, Alla Yurova, Rose Abramoff, Bertrand Guenet, Elisa Bruni, Samuli Launiainen, Mikko Peltoniemi, Shoji Hashimoto, Xianglin Tian, Juha Heikkinen, Kari Minkkinen, and Raisa Mäkipää
Geosci. Model Dev., 17, 5349–5367, https://doi.org/10.5194/gmd-17-5349-2024, https://doi.org/10.5194/gmd-17-5349-2024, 2024
Short summary
Short summary
Updating the Yasso07 soil C model's dependency on decomposition with a hump-shaped Ricker moisture function improved modelled soil organic C (SOC) stocks in a catena of mineral and organic soils in boreal forest. The Ricker function, set to peak at a rate of 1 and calibrated against SOC and CO2 data using a Bayesian approach, showed a maximum in well-drained soils. Using SOC and CO2 data together with the moisture only from the topsoil humus was crucial for accurate model estimates.
Tatsuya Miyauchi, Makoto Saito, Hibiki M. Noda, Akihiko Ito, Tomomichi Kato, and Tsuneo Matsunaga
EGUsphere, https://doi.org/10.5194/egusphere-2024-1542, https://doi.org/10.5194/egusphere-2024-1542, 2024
Short summary
Short summary
Solar-induced chlorophyll fluorescence (SIF) is an effective indicator for monitoring photosynthetic activity. This paper introduces VISIT-SIF, a biogeochemical process-based model developed to represent the global SIF observed by GOSAT. Our model simulation reproduced the global distribution and seasonal variations of GOSAT SIF. The model can be utilized to improve photosynthetic process through the combination of biogeochemical modeling and GOSAT SIF.
Jacquelyn K. Shuman, Rosie A. Fisher, Charles Koven, Ryan Knox, Lara Kueppers, and Chonggang Xu
Geosci. Model Dev., 17, 4643–4671, https://doi.org/10.5194/gmd-17-4643-2024, https://doi.org/10.5194/gmd-17-4643-2024, 2024
Short summary
Short summary
We adapt a fire behavior and effects module for use in a size-structured vegetation demographic model to test how climate, fire regime, and fire-tolerance plant traits interact to determine the distribution of tropical forests and grasslands. Our model captures the connection between fire disturbance and plant fire-tolerance strategies in determining plant distribution and provides a useful tool for understanding the vulnerability of these areas under changing conditions across the tropics.
Naveenkumar Parameswaran, Everardo González, Ewa Burwicz-Galerne, Malte Braack, and Klaus Wallmann
EGUsphere, https://doi.org/10.5194/egusphere-2024-1360, https://doi.org/10.5194/egusphere-2024-1360, 2024
Short summary
Short summary
Our research uses deep learning to predict organic carbon stocks in ocean sediments, crucial for understanding their role in the global carbon cycle. By analyzing over 22,000 samples and various seafloor characteristics, our model gives more accurate results than traditional methods. We estimate the top 10 cm of ocean sediments hold about 171 petagrams of carbon. This work enhances carbon stock estimates and helps plan future sampling strategies to better understand oceanic carbon burial.
Yoshiki Kanzaki, Isabella Chiaravalloti, Shuang Zhang, Noah J. Planavsky, and Christopher T. Reinhard
Geosci. Model Dev., 17, 4515–4532, https://doi.org/10.5194/gmd-17-4515-2024, https://doi.org/10.5194/gmd-17-4515-2024, 2024
Short summary
Short summary
Soil pH is one of the most commonly measured agronomical and biogeochemical indices, mostly reflecting exchangeable acidity. Explicit simulation of both porewater and bulk soil pH is thus crucial to the accurate evaluation of alkalinity required to counteract soil acidification and the resulting capture of anthropogenic carbon dioxide through the enhanced weathering technique. This has been enabled by the updated reactive–transport SCEPTER code and newly developed framework to simulate soil pH.
David Sandoval, Iain Colin Prentice, and Rodolfo L. B. Nóbrega
Geosci. Model Dev., 17, 4229–4309, https://doi.org/10.5194/gmd-17-4229-2024, https://doi.org/10.5194/gmd-17-4229-2024, 2024
Short summary
Short summary
Numerous estimates of water and energy balances depend on empirical equations requiring site-specific calibration, posing risks of "the right answers for the wrong reasons". We introduce novel first-principles formulations to calculate key quantities without requiring local calibration, matching predictions from complex land surface models.
Oliver Perkins, Matthew Kasoar, Apostolos Voulgarakis, Cathy Smith, Jay Mistry, and James D. A. Millington
Geosci. Model Dev., 17, 3993–4016, https://doi.org/10.5194/gmd-17-3993-2024, https://doi.org/10.5194/gmd-17-3993-2024, 2024
Short summary
Short summary
Wildfire is often presented in the media as a danger to human life. Yet globally, millions of people’s livelihoods depend on using fire as a tool. So, patterns of fire emerge from interactions between humans, land use, and climate. This complexity means scientists cannot yet reliably say how fire will be impacted by climate change. So, we developed a new model that represents globally how people use and manage fire. The model reveals the extent and diversity of how humans live with and use fire.
Amos P. K. Tai, David H. Y. Yung, and Timothy Lam
Geosci. Model Dev., 17, 3733–3764, https://doi.org/10.5194/gmd-17-3733-2024, https://doi.org/10.5194/gmd-17-3733-2024, 2024
Short summary
Short summary
We have developed the Terrestrial Ecosystem Model in R (TEMIR), which simulates plant carbon and pollutant uptake and predicts their response to varying atmospheric conditions. This model is designed to couple with an atmospheric chemistry model so that questions related to plant–atmosphere interactions, such as the effects of climate change, rising CO2, and ozone pollution on forest carbon uptake, can be addressed. The model has been well validated with both ground and satellite observations.
Fabian Stenzel, Johanna Braun, Jannes Breier, Karlheinz Erb, Dieter Gerten, Jens Heinke, Sarah Matej, Sebastian Ostberg, Sibyll Schaphoff, and Wolfgang Lucht
Geosci. Model Dev., 17, 3235–3258, https://doi.org/10.5194/gmd-17-3235-2024, https://doi.org/10.5194/gmd-17-3235-2024, 2024
Short summary
Short summary
We provide an R package to compute two biosphere integrity metrics that can be applied to simulations of vegetation growth from the dynamic global vegetation model LPJmL. The pressure metric BioCol indicates that we humans modify and extract > 20 % of the potential preindustrial natural biomass production. The ecosystems state metric EcoRisk shows a high risk of ecosystem destabilization in many regions as a result of climate change and land, water, and fertilizer use.
Elin Ristorp Aas, Heleen A. de Wit, and Terje K. Berntsen
Geosci. Model Dev., 17, 2929–2959, https://doi.org/10.5194/gmd-17-2929-2024, https://doi.org/10.5194/gmd-17-2929-2024, 2024
Short summary
Short summary
By including microbial processes in soil models, we learn how the soil system interacts with its environment and responds to climate change. We present a soil process model, MIMICS+, which is able to reproduce carbon stocks found in boreal forest soils better than a conventional land model. With the model we also find that when adding nitrogen, the relationship between soil microbes changes notably. Coupling the model to a vegetation model will allow for further study of these mechanisms.
Thomas Wutzler, Christian Reimers, Bernhard Ahrens, and Marion Schrumpf
Geosci. Model Dev., 17, 2705–2725, https://doi.org/10.5194/gmd-17-2705-2024, https://doi.org/10.5194/gmd-17-2705-2024, 2024
Short summary
Short summary
Soil microbes provide a strong link for elemental fluxes in the earth system. The SESAM model applies an optimality assumption to model those linkages and their adaptation. We found that a previous heuristic description was a special case of a newly developed more rigorous description. The finding of new behaviour at low microbial biomass led us to formulate the constrained enzyme hypothesis. We now can better describe how microbially mediated linkages of elemental fluxes adapt across decades.
Salvatore R. Curasi, Joe R. Melton, Elyn R. Humphreys, Txomin Hermosilla, and Michael A. Wulder
Geosci. Model Dev., 17, 2683–2704, https://doi.org/10.5194/gmd-17-2683-2024, https://doi.org/10.5194/gmd-17-2683-2024, 2024
Short summary
Short summary
Canadian forests are responding to fire, harvest, and climate change. Models need to quantify these processes and their carbon and energy cycling impacts. We develop a scheme that, based on satellite records, represents fire, harvest, and the sparsely vegetated areas that these processes generate. We evaluate model performance and demonstrate the impacts of disturbance on carbon and energy cycling. This work has implications for land surface modeling and assessing Canada’s terrestrial C cycle.
Yannek Käber, Florian Hartig, and Harald Bugmann
Geosci. Model Dev., 17, 2727–2753, https://doi.org/10.5194/gmd-17-2727-2024, https://doi.org/10.5194/gmd-17-2727-2024, 2024
Short summary
Short summary
Many forest models include detailed mechanisms of forest growth and mortality, but regeneration is often simplified. Testing and improving forest regeneration models is challenging. We address this issue by exploring how forest inventories from unmanaged European forests can be used to improve such models. We find that competition for light among trees is captured by the model, unknown model components can be informed by forest inventory data, and climatic effects are challenging to capture.
Jalisha T. Kallingal, Johan Lindström, Paul A. Miller, Janne Rinne, Maarit Raivonen, and Marko Scholze
Geosci. Model Dev., 17, 2299–2324, https://doi.org/10.5194/gmd-17-2299-2024, https://doi.org/10.5194/gmd-17-2299-2024, 2024
Short summary
Short summary
By unlocking the mysteries of CH4 emissions from wetlands, our work improved the accuracy of the LPJ-GUESS vegetation model using Bayesian statistics. Via assimilation of long-term real data from a wetland, we significantly enhanced CH4 emission predictions. This advancement helps us better understand wetland contributions to atmospheric CH4, which are crucial for addressing climate change. Our method offers a promising tool for refining global climate models and guiding conservation efforts
Benjamin Post, Esteban Acevedo-Trejos, Andrew D. Barton, and Agostino Merico
Geosci. Model Dev., 17, 1175–1195, https://doi.org/10.5194/gmd-17-1175-2024, https://doi.org/10.5194/gmd-17-1175-2024, 2024
Short summary
Short summary
Creating computational models of how phytoplankton grows in the ocean is a technical challenge. We developed a new tool set (Xarray-simlab-ODE) for building such models using the programming language Python. We demonstrate the tool set in a library of plankton models (Phydra). Our goal was to allow scientists to develop models quickly, while also allowing the model structures to be changed easily. This allows us to test many different structures of our models to find the most appropriate one.
Taeken Wijmer, Ahmad Al Bitar, Ludovic Arnaud, Remy Fieuzal, and Eric Ceschia
Geosci. Model Dev., 17, 997–1021, https://doi.org/10.5194/gmd-17-997-2024, https://doi.org/10.5194/gmd-17-997-2024, 2024
Short summary
Short summary
Quantification of carbon fluxes of crops is an essential building block for the construction of a monitoring, reporting, and verification approach. We developed an end-to-end platform (AgriCarbon-EO) that assimilates, through a Bayesian approach, high-resolution (10 m) optical remote sensing data into radiative transfer and crop modelling at regional scale (100 x 100 km). Large-scale estimates of carbon flux are validated against in situ flux towers and yield maps and analysed at regional scale.
Moritz Laub, Sergey Blagodatsky, Marijn Van de Broek, Samuel Schlichenmaier, Benjapon Kunlanit, Johan Six, Patma Vityakon, and Georg Cadisch
Geosci. Model Dev., 17, 931–956, https://doi.org/10.5194/gmd-17-931-2024, https://doi.org/10.5194/gmd-17-931-2024, 2024
Short summary
Short summary
To manage soil organic matter (SOM) sustainably, we need a better understanding of the role that soil microbes play in aggregate protection. Here, we propose the SAMM model, which connects soil aggregate formation to microbial growth. We tested it against data from a tropical long-term experiment and show that SAMM effectively represents the microbial growth, SOM, and aggregate dynamics and that it can be used to explore the importance of aggregate formation in SOM stabilization.
Jianhong Lin, Daniel Berveiller, Christophe François, Heikki Hänninen, Alexandre Morfin, Gaëlle Vincent, Rui Zhang, Cyrille Rathgeber, and Nicolas Delpierre
Geosci. Model Dev., 17, 865–879, https://doi.org/10.5194/gmd-17-865-2024, https://doi.org/10.5194/gmd-17-865-2024, 2024
Short summary
Short summary
Currently, the high variability of budburst between individual trees is overlooked. The consequences of this neglect when projecting the dynamics and functioning of tree communities are unknown. Here we develop the first process-oriented model to describe the difference in budburst dates between individual trees in plant populations. Beyond budburst, the model framework provides a basis for studying the dynamics of phenological traits under climate change, from the individual to the community.
Skyler Kern, Mary E. McGuinn, Katherine M. Smith, Nadia Pinardi, Kyle E. Niemeyer, Nicole S. Lovenduski, and Peter E. Hamlington
Geosci. Model Dev., 17, 621–649, https://doi.org/10.5194/gmd-17-621-2024, https://doi.org/10.5194/gmd-17-621-2024, 2024
Short summary
Short summary
Computational models are used to simulate the behavior of marine ecosystems. The models often have unknown parameters that need to be calibrated to accurately represent observational data. Here, we propose a novel approach to simultaneously determine a large set of parameters for a one-dimensional model of a marine ecosystem in the surface ocean at two contrasting sites. By utilizing global and local optimization techniques, we estimate many parameters in a computationally efficient manner.
Shuaitao Wang, Vincent Thieu, Gilles Billen, Josette Garnier, Marie Silvestre, Audrey Marescaux, Xingcheng Yan, and Nicolas Flipo
Geosci. Model Dev., 17, 449–476, https://doi.org/10.5194/gmd-17-449-2024, https://doi.org/10.5194/gmd-17-449-2024, 2024
Short summary
Short summary
This paper presents unified RIVE v1.0, a unified version of the freshwater biogeochemistry model RIVE. It harmonizes different RIVE implementations, providing the referenced formalisms for microorganism activities to describe full biogeochemical cycles in the water column (e.g., carbon, nutrients, oxygen). Implemented as open-source projects in Python 3 (pyRIVE 1.0) and ANSI C (C-RIVE 0.32), unified RIVE v1.0 promotes and enhances collaboration among research teams and public services.
Sam S. Rabin, William J. Sacks, Danica L. Lombardozzi, Lili Xia, and Alan Robock
Geosci. Model Dev., 16, 7253–7273, https://doi.org/10.5194/gmd-16-7253-2023, https://doi.org/10.5194/gmd-16-7253-2023, 2023
Short summary
Short summary
Climate models can help us simulate how the agricultural system will be affected by and respond to environmental change, but to be trustworthy they must realistically reproduce historical patterns. When farmers plant their crops and what varieties they choose will be important aspects of future adaptation. Here, we improve the crop component of a global model to better simulate observed growing seasons and examine the impacts on simulated crop yields and irrigation demand.
Cited articles
Abramowitz, G.: Towards a public, standardized, diagnostic benchmarking system for land surface models, Geosci. Model Dev., 5, 819–827, https://doi.org/10.5194/gmd-5-819-2012, 2012.
Abramowitz, G., Leuning, R., Clark, M., and Pitman, A.: Evaluating the performance of land surface models, J. Climate, 21, 5468–5481, 2008.
Anav, A., Friedlingstein, P., Kidston, M., Bopp, L., Ciais, P., Cox, P., Jones, C., Jung, M., Myneni, R., and Zhu, Z.: Evaluating the land and ocean components of the global carbon cycle in the CMIP5 Earth System Models, J. Climate, 26, 6801–6843, 2013.
Anten, N. P. and During, H. J.: Is analysing the nitrogen use at the plant canopy level a matter of choosing the right optimization criterion?, Oecologia, 167, 293–303, 2011.
Arora, V. K. and Boer, G. J.: Simulating competition and coexistence between plant functional types in a dynamic vegetation model, Earth Interact., 10, 1–30, 2006.
Arora, V. K., Boer, G. J., Friedlingstein, P., Eby, M., Jones, C. D., Christian, J. R., Bonan, G., Bopp, L., Brovkin, V., Cadule, P., Hajima, T., Ilyana, T., Lindsay, K., Tjiputra, J. F., and Wu, T.: Carbon–concentration and carbon–climate feedbacks in CMIP5 Earth system models, J. Climate, 26, 5289–5314, 2013.
Asner, G. P., Scurlock, J. M., and A Hicke, J.: Global synthesis of leaf area index observations: implications for ecological and remote sensing studies, Global Ecol. Biogeogr., 12, 191–205, 2003.
Atkin, O. K., Atkinson, L. J., Fisher, R. A., Campbell, C. D., Zaragoza-Castells, J., Pitchford, J. W., Woodward, F., and Hurry, V.: Using temperature-dependent changes in leaf scaling relationships to quantitatively account for thermal acclimation of respiration in a coupled global climate–vegetation model, Global Change Biol., 14, 2709–2726, 2008.
Atkin, O. K., Bloomfield, K. J., Reich, P. B., Tjoelker, M. G., Asner, G. P., Bonal, D., Bönisch, G., Bradford, M. G., Cernusak, L. A., Cosio, E. G., Creek, D., Crous, K. Y., Domingues, T. F., Dukes, J. S., Egerton, J. J. G., Evans, J. R., Farquhar, G. D., Fyllas, N. M., Gauthier, P. P. G., Gloor, E., Gimeno, T. E., Griffin, K. L., Guerrieri, R., Heskel, M. A., Huntingford, C., Ishida, F. Y., Kattge, J., Lambers, H., Liddell, M. J., Lloyd, J., Lusk, C. H., Martin, R. E., Maksimov, A. P., Maximov, T. C., Malhi, Y., Medlyn, B. E., Meir, P., Mercado, L. M., Mirotchnick, N., Ng, D., Niinemets, U., O’Sullivan, O. S., Phillips, O. L., Poorter, L., Poot, P., Prentice, I. C., Salinas, N., Rowland, L. M., Ryan, M. G., Sitch, S., Slot, M., Smith, N. G., Turnbull, M. H., VanderWel, M. C., Valladares, F., Veneklaas, E. J., Weerasinghe, L. K., Wirth, C., Wright, I. J., Wythers, K. R., Xiang, J., Xiang, S., and Zaragoza-Castells, J.: Global variability in leaf respiration in relation to climate, plant functional types and leaf traits, New Phytol., 206, 614–636, 2015.
Baudena, M., Dekker, S. C., van Bodegom, P. M., Cuesta, B., Higgins, S. I., Lehsten, V., Reick, C. H., Rietkerk, M., Scheiter, S., Yin, Z., Zavala, M. A., and Brovkin, V.: Forests, savannas, and grasslands: bridging the knowledge gap between ecology and Dynamic Global Vegetation Models, Biogeosciences, 12, 1833–1848, https://doi.org/10.5194/bg-12-1833-2015, 2015.
Beer, C., Reichstein, M., Tomelleri, E., Ciais, P., Jung, M., Carvalhais, N., Rodenbeck, C., Arain, M. A., Baldocchi, D., Bonan, G. B., Bondeau, A., Cescatti, A., Lasslop, G., Lindroth, A., Lomas, M., Luyssaert, S., Margolis, H., Oleson, K. W., Roupsard, O., Veenendaal, E., Viovy, N., Williams, C., Woodward, F. I., and Papale, D.: Terrestrial gross carbon dioxide uptake: global distribution and covariation with climate, Science, 329, 834–838, 2010.
Best, M. J., Pryor, M., Clark, D. B., Rooney, G. G., Essery, R. L. H., Ménard, C. B., Edwards, J. M., Hendry, M. A., Porson, A., Gedney, N., Mercado, L. M., Sitch, S., Blyth, E., Boucher, O., Cox, P. M., Grimmond, C. S. B., and Harding, R. J.: The Joint UK Land Environment Simulator (JULES), model description – Part 1: Energy and water fluxes, Geosci. Model Dev., 4, 677-699, https://doi.org/10.5194/gmd-4-677-2011, 2011.
Blyth, E., Gash, J., Lloyd, A., Pryor, M., Weedon, G. P., and Shuttleworth, J.: Evaluating the JULES land surface model energy fluxes using FLUXNET data, J. Hydrometeorol., 11, 509–519, 2010.
Blyth, E., Clark, D. B., Ellis, R., Huntingford, C., Los, S., Pryor, M., Best, M., and Sitch, S.: A comprehensive set of benchmark tests for a land surface model of simultaneous fluxes of water and carbon at both the global and seasonal scale, Geosci. Model Dev., 4, 255–269, https://doi.org/10.5194/gmd-4-255-2011, 2011.
Bohn, K., Dyke, J. G., Pavlick, R., Reineking, B., Reu, B., and Kleidon, A.: The relative importance of seed competition, resource competition and perturbations on community structure, Biogeosciences, 8, 1107–1120, https://doi.org/10.5194/bg-8-1107-2011, 2011.
Bonan, G. B., Oleson, K. W., Fisher, R. A., Lasslop, G., and Reichstein, M.: Reconciling leaf physiological traits and canopy flux data: Use of the TRY and FLUXNET databases in the Community Land Model version 4, J. Geophys. Res.-Biogeo., 117, G02015, https://doi.org/10.1029/2010JG001615, 2012.
Bonan, G. B., Williams, M., Fisher, R. A., and Oleson, K. W.: Modeling stomatal conductance in the earth system: linking leaf water-use efficiency and water transport along the soil–plant–atmosphere continuum, Geosci. Model Dev., 7, 2193–2222, https://doi.org/10.5194/gmd-7-2193-2014, 2014.
Booth, B. B., Jones, C. D., Collins, M., Totterdell, I. J., Cox, P. M., Sitch, S., Huntingford, C., Betts, R. A., Harris, G. R., and Lloyd, J.: High sensitivity of future global warming to land carbon cycle processes, Environ. Res. Lett., 7, 024002, https://doi.org/10.1088/1748-9326/7/2/024002, 2012.
Botta, A., Viovy, N., Ciais, P., Friedlingstein, P., and Monfray, P.: A global prognostic scheme of leaf onset using satellite data, Global Change Biol., 6, 709–725, 2000.
Boulangeat, I., Philippe, P., Abdulhak, S., Douzet, R., Garraud, L., Lavergne, S., Lavorel, S., Van Es, J., Vittoz, P., and Thuiller, W.: Improving plant functional groups for dynamic models of biodiversity: at the crossroads between functional and community ecology, Global Change Biol., 18, 3464–3475, 2012.
Brzostek, E. R., Fisher, J. B., and Phillips, R. P.: Modeling the carbon cost of plant nitrogen acquisition: Mycorrhizal trade-offs and multipath resistance uptake improve predictions of retranslocation, J. Geophys. Res.-Biogeo., 119, 1684–1697, 2014.
Burakowski, E., Chen, M., Birkel, S., Ollinger, S., Hollinger, D., Wake, C., and Dibb, J.: Winter Climate Impacts of Mid-1800's Deforestation in New England Using the Weather, Research, and Forecasting (WRF) Model, J. Climate, submitted, 2015.
Christoffersen, B. O., Restrepo-Coupe, N., Arain, M. A., Baker, I. T., Cestaro, B. P., Ciais, P., Fisher, J. B., Galbraith, D., Guan, X., Gulden, L., van den Hurk, B., Ichii, K., Imbuzeiro, H., Jain, A., Levine, N., Miguez-Macho, G., Poulter, B., Roberti, D. R., Sakaguchi, K., Sahoo, A., Schaefer, K., Shi, M., Verbeeck, H., Yang, Z.-L., Araújo, A. C., Kruijt, B., Manzi, A. O., da Rocha, H. R., von Randow, C., Muza, M. N., and Borak, J.: Mechanisms of water supply and vegetation demand govern the seasonality and magnitude of evapotranspiration in Amazonia and Cerrado, Agr. Forest Meteorol., 191, 33–50, 2014.
Cox, P., Huntingford, C., and Harding, R.: A canopy conductance and photosynthesis model for use in a GCM land surface scheme, J. Hydrol., 212, 79–94, 1998.
Cox, P. M., Betts, R. A., Jones, C. D., Spall, S. A., and Totterdell, I. J.: Acceleration of global warming due to carbon-cycle feedbacks in a coupled climate model, Nature, 408, 184–187, 2000.
Dahlin, K. M., Asner, G. P., and Field, C. B.: Environmental filtering and land-use history drive patterns in biomass accumulation in a mediterranean-type landscape, Ecol. Appl., 22, 104–118, 2012.
Dahlin, K. M., Asner, G. P., and Field, C. B.: Environmental and community controls on plant canopy chemistry in a Mediterranean-type ecosystem, P. Natl. Aca. Sci., 110, 6895–6900, 2013.
Dahlin, K. M., Fisher, R. A., and Lawrence, P. J.: Environmental drivers of drought deciduous phenology in the Community Land Model, Biogeosciences, 12, 5061–5074, https://doi.org/10.5194/bg-12-5061-2015, 2015.
DeFries, R. S., Hansen, M. C., Townshend, J. R. G., Janetos, A. C., and Loveland, T. R.: A new global 1-km dataset of percentage tree cover derived from remote sensing, Global Change Biol., 6, 247–254, 2000.
Dewar, R. C., Franklin, O., Mäkelä, A., McMurtrie, R. E., and Valentine, H. T.: Optimal function explains forest responses to global change, Bioscience, 59, 127–139, 2009.
Dybzinski, R., Farrior, C. E., and Pacala, S. W.: Increased forest carbon storage with increased atmospheric CO2 despite nitrogen limitation: a game-theoretic allocation model for trees in competition for nitrogen and light, Global Change Biol., 21, 1182–1196, 2014.
Eissenstat, D., Wells, C., Yanai, R., and Whitbeck, J.: Building roots in a changing environment: implications for root longevity, New Phytol., 147, 33–42, 2000.
Enquist, B. J., Norberg, J., Bonser, S. P., Violle, C., Webb, C. T., Henderson, A., Sloat, L. L., and Savage, V. M.: Scaling from traits to ecosystems: Developing a general Trait Driver Theory via integrating trait-based and metabolic scaling theories, arXiv preprint arXiv:1502.06629, 2015.
Falloon, P., Challinor, A., Dessai, S., Hoang, L., Johnson, J., and Koehler, A.-K.: Ensembles and uncertainty in climate change impacts, Interdisciplinary Climate Studies, 2, 33, https://doi.org/10.3389/fenvs.2014.00033, 2014.
Falster, D. S., Brännström, Å., Dieckmann, U., and Westoby, M.: Influence of four major plant traits on average height, leaf-area cover, net primary productivity, and biomass density in single-species forests: a theoretical investigation, J. Ecol., 99, 148–164, 2011.
Farrior, C. E., Tilman, D., Dybzinski, R., Reich, P. B., Levin, S. A., and Pacala, S. W.: Resource limitation in a competitive context determines complex plant responses to experimental resource additions, Ecology, 94, 2505–2517, 2013.
Fischer, E. M., Lawrence, D. M., and Sanderson, B. M.: Quantifying uncertainties in projections of extremes – a perturbed land surface parameter experiment, Clim. Dynam., 37, 1381–1398, 2011.
Fisher, J., Sitch, S., Malhi, Y., Fisher, R., Huntingford, C., and Tan, S.-Y.: Carbon cost of plant nitrogen acquisition: A mechanistic, globally applicable model of plant nitrogen uptake, retranslocation, and fixation, Global Biogeochem. Cy., 24, 666–681, 2010.
Fisher, R., Williams, M., Costa, D., Lola, A., Malhi, Y., Da Costa, R., Almeida, S., and Meir, P.: The response of an Eastern Amazonian rain forest to drought stress: results and modelling analyses from a throughfall exclusion experiment, Global Change Biol., 13, 2361–2378, 2007.
Fox, A., Williams, M., Richardson, A. D., Cameron, D., Gove, J. H., Quaife, T., Ricciuto, D., Reichstein, M., Tomelleri, E., Trudinger, C. M., and van Wijk, M. T.: The REFLEX project: comparing different algorithms and implementations for the inversion of a terrestrial ecosystem model against eddy covariance data, Agr. Forest Meteorol., 149, 1597–1615, 2009.
Franklin, O., Johansson, J., Dewar, R. C., Dieckmann, U., McMurtrie, R. E., Brännström, Å., and Dybzinski, R.: Modeling carbon allocation in trees: a search for principles, Tree Physiol., 138, 648–666, https://doi.org/10.1093/treephys/tpr138, 2012.
Friedlingstein, P., Joel, G., Field, C., and Fung, I.: Toward an allocation scheme for global terrestrial carbon models, Global Change Biol., 5, 755–770, 1999.
Friedlingstein, P., Cox, P., Betts, R., Bopp, L., Von Bloh, W., Brovkin, V., Cadule, P., Doney, S., Eby, M., Fung, I., Bala, G., John, J., Jones, C., Joos, F., Kato, T., Kawamiya, M., Knorr, W., Lindsay, K., Matthews, H. D., Raddatz, T., Rayner, P., Reick, C., Roeckner, E., Schnitzler, K. G., Schnur, R., Strassmann, K., Weaver, A. J., Yoshikawa, C., and Zeng, N.: Climate-carbon cycle feedback analysis: Results from the C4MIP model intercomparison, J. Climate, 19, 3337–3353, 2006.
Friedlingstein, P., Meinshausen, M., Arora, V. K., Jones, C. D., Anav, A., Liddicoat, S. K., and Knutti, R.: Uncertainties in CMIP5 climate projections due to carbon cycle feedbacks, J. Climate, 27, 511–526, 2014.
Fyllas, N. M., Gloor, E., Mercado, L. M., Sitch, S., Quesada, C. A., Domingues, T. F., Galbraith, D. R., Torre-Lezama, A., Vilanova, E., Ram\'irez-Angulo, H., Higuchi, N., Neill, D. A., Silveira, M., Ferreira, L., Aymard C., G. A., Malhi, Y., Phillips, O. L., and Lloyd, J.: Analysing Amazonian forest productivity using a new individual and trait-based model (TFS v.1), Geosci. Model Dev., 7, 1251–1269, https://doi.org/10.5194/gmd-7-1251-2014, 2014.
Gill, R. A. and Jackson, R. B.: Global patterns of root turnover for terrestrial ecosystems, New Phytol., 147, 13–31, 2000.
Givnish, T. J.: Adaptive significance of evergreen vs. deciduous leaves: solving the triple paradox, Silva Fennica, 36, 703–743, 2002.
Goll, D. S., Brovkin, V., Parida, B. R., Reick, C. H., Kattge, J., Reich, P. B., van Bodegom, P. M., and Niinemets, Ü.: Nutrient limitation reduces land carbon uptake in simulations with a model of combined carbon, nitrogen and phosphorus cycling, Biogeosciences, 9, 3547–3569, https://doi.org/10.5194/bg-9-3547-2012, 2012.
Guo, D., Li, H., Mitchell, R. J., Han, W., Hendricks, J. J., Fahey, T. J., and Hendrick, R. L.: Fine root heterogeneity by branch order: exploring the discrepancy in root turnover estimates between minirhizotron and carbon isotopic methods, New Phytol., 177, 443–456, 2008.
Haxeltine, A. and Prentice, I. C.: BIOME3: An equilibrium terrestrial biosphere model based on ecophysiological constraints, resource availability, and competition among plant functional types, Global Biogeochem. Cy., 10, 693–709, 1996.
Hickler, T., Smith, B., Prentice, I. C., Mjöfors, K., Miller, P., Arneth, A., and Sykes, M. T.: CO2 fertilization in temperate FACE experiments not representative of boreal and tropical forests, Global Change Biol., 14, 1531–1542, 2008.
Holdridge, L. R.: Life zone ecology, Tropical Science Center, San José, Costa Rica, 1967.
Hou, Z., Huang, M., Leung, L. R., Lin, G., and Ricciuto, D. M.: Sensitivity of surface flux simulations to hydrologic parameters based on an uncertainty quantification framework applied to the Community Land Model, J. Geophys. Res.-Atmos., 117, D15108, https://doi.org/10.1029/2012JD017521, 2012.
Huntingford, C., Zelazowski, P., Galbraith, D., Mercado, L., Sitch, S., Fisher, R., Lomas, M., Walker, P. A., Jones, C. D., Booth, B. B., Malhi, Y., Hemming, D., Kay, G., Good, P., Lewis, S. L., Phillips, L. O., Atkin, O. K., Lloyd, J., Gloor, E., Zaragoza-Castells, J., Meir, P., Betts, R., Harris, P., Nobre, C., Marengo, J., and Cox, P. M.: Simulated resilience of tropical rainforests to CO2-induced climate change, Nat. Geosci., 6, 268–273, 2013.
Hurrell, J. W., Holland, M., Gent, P., Ghan, S., Kay, J. E., Kushner, P., Lamarque, J.-F., Large, W., Lawrence, D., Lindsay, K., Lipscomb, W. H., Long, M. C., Mahowald, N., Marsh, D. R., Neale, R. B., Rasch, P., Vavrus, S., Vertenstein, M., Bader, D., Collins, W. D., Hack, J. J., Kiehl, J., and Marshall, S.: The community earth system model: a framework for collaborative research, Bull. Am. Meteorol. Soc., 94, 1339–1360, 2013.
Hurtt, G. C., Moorcroft, P., Pacala, S. W., Stephen, W., and Levin, S. A.: Terrestrial models and global change: challenges for the future, Global Change Biol., 4, 581–590, 1998.
Joetzjer, E., Delire, C., Douville, H., Ciais, P., Decharme, B., Fisher, R., Christoffersen, B., Calvet, J. C., da Costa, A. C. L., Ferreira, L. V., and Meir, P.: Predicting the response of the Amazon rainforest to persistent drought conditions under current and future climates: a major challenge for global land surface models, Geosci. Model Dev., 7, 2933–2950, https://doi.org/10.5194/gmd-7-2933-2014, 2014.
Joslin, J., Gaudinski, J., Torn, M., Riley, W., and Hanson, P.: Fine-root turnover patterns and their relationship to root diameter and soil depth in a 14C-labeled hardwood forest, New Phytol., 172, 523–535, 2006.
Jung, M., Reichstein, M., Margolis, H. A., Cescatti, A., Richardson, A. D., Arain, M. A., Arneth, A., Bernhofer, C., Bonal, D., Chen, J., Damiano, G., Gobron, N., Kiely, G., Kutsch, W., Lasslop, G., Law, B. E., Lindroth, A., Merbold, L., Montagnani, L., Moors, E. J., Papale, D., Sottocornola, M., Vaccari, F., and Williams, C.: Global patterns of land-atmosphere fluxes of carbon dioxide, latent heat, and sensible heat derived from eddy covariance, satellite, and meteorological observations, J. Geophys. Res.-Biogeo., 116, https://doi.org/10.1029/2010JG001566, 2011.
Kattge, J., Knorr, W., Raddatz, T., and Wirth, C.: Quantifying photosynthetic capacity and its relationship to leaf nitrogen content for global-scale terrestrial biosphere models, Global Change Biol., 15, 976–991, 2009.
Kauwe, M. G., Medlyn, B. E., Zaehle, S., Walker, A. P., Dietze, M. C., Hickler, T., Jain, A. K., Luo, Y., Parton, W. J., Prentice, I. C., Smith, B., Thornton, P. E., Wang, S., Wang, Y.-P., Warlind, D., Weng, E., Crous, K. Y., Ellsworth, D. S., Hanson, P. J., Seok Kim, H., Warren, J. M., Oren, R., and Norby, R. J.: Where does the carbon go? A model–data intercomparison of vegetation carbon allocation and turnover processes at two temperate forest free-air CO2 enrichment sites, New Phytol., 203, 883–899, 2014.
Kauwe, M. G., Medlyn, B. E., Zaehle, S., Walker, A. P., Dietze, M. C., Hickler, T., Jain, A. K., Luo, Y., Parton, W. J., Prentice, I. C., Smith, B., Thornton, P. E., Wang, S., Wang, Y.-P., Warlind, D., Weng, E., Crous, K. Y., Ellsworth, D. S., Hanson, P. J., Seok Kim, H., Warren, J. M., Oren, R., and Norby, R. J.: Forest water use and water use efficiency at elevated CO2: a model-data intercomparison at two contrasting temperate forest FACE sites, Global Change Biol., 19, 1759–1779, 2013.
Kay, J., Deser, C., Phillips, A., Mai, A., Hannay, C., Strand, G., Arblaster, J., Bates, S., Danabasoglu, G., Edwards, J., Holland, M., Kushner, P., Lamarque, J.-F., Lawrence, D., Lindsay, K., Middleton, A., Munoz, E., Neale, R., Oleson, K., Polvani, L., and Vertenstein, M.: The Community Earth System Model (CESM) Large Ensemble Project: A community resource for studying climate change in the presence of internal climate variability, B. Am. Meteorol. Soc., 96, 1333–1349, https://doi.org/10.1175/BAMS-D-13-00255.1, 2014.
Kelley, D. I., Prentice, I. C., Harrison, S. P., Wang, H., Simard, M., Fisher, J. B., and Willis, K. O.: A comprehensive benchmarking system for evaluating global vegetation models, Biogeosciences, 10, 3313–3340, https://doi.org/10.5194/bg-10-3313-2013, 2013.
Kikuzawa, K., Onoda, Y., Wright, I. J., and Reich, P. B.: Mechanisms underlying global temperature-related patterns in leaf longevity, Global Ecol. Biogeogr., 22, 982–993, 2013.
Krinner, G., Viovy, N., de Noblet-Ducoudré, N., Ogée, J., Polcher, J., Friedlingstein, P., Ciais, P., Sitch, S., and Prentice, I. C.: A dynamic global vegetation model for studies of the coupled atmosphere-biosphere system, Global Biogeochem. Cy., 19, GB1015, https://doi.org/10.1029/2003GB002199, 2005.
Lawrence, D. M., Oleson, K. W., Flanner, M. G., Thornton, P. E., Swenson, S. C., Lawrence, P. J., Zeng, X., Yang, Z.-L., Levis, S., Sakaguchi, K., Bonan, G., and Slater, A. S.: Parameterization improvements and functional and structural advances in version 4 of the Community Land Model, J. Adv. Model. Earth Syst., 3, M03001, https://doi.org/10.1029/2011MS00045, 2011.
Lawrence, P. J. and Chase, T. N.: Investigating the climate impacts of global land cover change in the community climate system model, International J. Climatol., 30, 2066–2087, 2010.
Levis, S., Foley, J. A., and Pollard, D.: Large-scale vegetation feedbacks on a doubled CO2 climate, J. Climate, 13, 1313–1325, 2000.
Levis, S., Bonan, G., Vertenstein, M., and Oleson, K.: The Community Land Model's dynamic global vegetation model (CLM-DGVM): Technical description and user's guide, NCAR Technical Note, TN-459+IA, 2004.
Lichstein, J. W. and Pacala, S. W.: Local diversity in heterogeneous landscapes: quantitative assessment with a height-structured forest metacommunity model, Theoretical Ecol., 4, 269–281, 2011.
Lischke, H., Zimmermann, N. E., Bolliger, J., Rickebusch, S., and Löffler, T. J.: TreeMig: a forest-landscape model for simulating spatio-temporal patterns from stand to landscape scale, Ecol. Modell., 199, 409–420, 2006.
Lloyd, J. and Farquhar, G. D.: Effects of rising temperatures and [CO2] on the physiology of tropical forest trees, Philos. Trans. Roy. Soc. B, 363, 1811–1817, 2008.
Loew, A., van Bodegom, P. M., Widlowski, J.-L., Otto, J., Quaife, T., Pinty, B., and Raddatz, T.: Do we (need to) care about canopy radiation schemes in DGVMs? Caveats and potential impacts, Biogeosciences, 11, 1873–1897, https://doi.org/10.5194/bg-11-1873-2014, 2014.
Lombardozzi, D., Bonan, G. B., and Nychka, D. W.: The emerging anthropogenic signal in land-atmosphere carbon-cycle coupling, Nat. Clim. Change, 4, 796–800, https://doi.org/10.1038/nclimate2323, 2014.
Luo, Y. Q., Randerson, J. T., Abramowitz, G., Bacour, C., Blyth, E., Carvalhais, N., Ciais, P., Dalmonech, D., Fisher, J. B., Fisher, R., Friedlingstein, P., Hibbard, K., Hoffman, F., Huntzinger, D., Jones, C. D., Koven, C., Lawrence, D., Li, D. J., Mahecha, M., Niu, S. L., Norby, R., Piao, S. L., Qi, X., Peylin, P., Prentice, I. C., Riley, W., Reichstein, M., Schwalm, C., Wang, Y. P., Xia, J. Y., Zaehle, S., and Zhou, X. H.: A framework for benchmarking land models, Biogeosciences, 9, 3857–3874, https://doi.org/10.5194/bg-9-3857-2012, 2012.
MATLAB: MATLAB and Statistics Toolbox Release 2012b, version 8.0.0.783 (R2012b), The MathWorks Inc., Natick, Massachusetts, 2012.
McCormack, L., Adams, T. S., Smithwick, E. A., and Eissenstat, D. M.: Predicting fine root lifespan from plant functional traits in temperate trees, New Phytol., 195, 823–831, 2012.
McDowell, N. G., Fisher, R. A., Xu, C., Domec, J. C., Hölttä, T., Mackay, D. S., Sperry, J. S., Boutz, A., Dickman, L., Gehres, N., Limousin, J. M., Macalady, A., Mart\'inez-Vilalta, J., Mencuccini, M., Plaut, J. A., Ogée, J., Pangle, R. E., Rasse, D. P., Ryan, M. G., Sevanto, S., Waring, R. H., Williams, A. P., Yepez, E. A., and Pockman, W. T.: Evaluating theories of drought-induced vegetation mortality using a multimodel–experiment framework, New Phytol., 200, 304–321, 2013.
McGill, B. J., Enquist, B. J., Weiher, E., and Westoby, M.: Rebuilding community ecology from functional traits, Trends Ecol. Evolut., 21, 178–185, 2006.
McMurtrie, R. E. and Dewar, R. C.: New insights into carbon allocation by trees from the hypothesis that annual wood production is maximized, New Phytol., 199, 981–990, 2013.
McNickle, G. G. and Dybzinski, R.: Game theory and plant ecology, Ecol. Lett., 16, 545–555, 2013.
Medlyn, B. E., Duursma, R. A., Eamus, D., Ellsworth, D. S., Prentice, I. C., Barton, C. V., Crous, K. Y., de Angelis, P., Freeman, M., and Wingate, L.: Reconciling the optimal and empirical approaches to modelling stomatal conductance, Global Change Biol., 17, 2134–2144, 2011.
Medvigy, D., Wofsy, S., Munger, J., Hollinger, D., and Moorcroft, P.: Mechanistic scaling of ecosystem function and dynamics in space and time: Ecosystem Demography model version 2, J. Geophys. Res.-Biogeo., 114, G01002, https://doi.org/10.1029/2008JG000812, 2009.
Melton, J. and Arora, V.: Competition between plant functional types in the Canadian Terrestrial Ecosystem Model (CTEM) v. 2.0, 2015.
Moncrieff, G., Scheiter, S., Slingsby, J., and Higgins, S.: Understanding global change impacts on South African biomes using Dynamic Vegetation Models, S. Afr. J. Botany, https://doi.org/10.1016/j.sajb.2015.02.004, in press, 2015.
Moorcroft, P., Hurtt, G., and Pacala, S. W.: A method for scaling vegetation dynamics: the ecosystem demography model ED, Ecol. Monogr., 71, 557–586, 2001.
Moorcroft, P. R.: How close are we to a predictive science of the biosphere?, Trends Ecol. Evolut., 21, 400–407, 2006.
Morin, X. and Thuiller, W.: Comparing niche-and process-based models to reduce prediction uncertainty in species range shifts under climate change, Ecology, 90, 1301–1313, 2009.
Nabel, J. E., Kirchner, J. W., Zurbriggen, N., Kienast, F., and Lischke, H.: Extrapolation methods for climate time series revisited–Spatial correlations in climatic fluctuations influence simulated tree species abundance and migration, Ecol. Complex., 20, 315–324, 2014.
Niinemets, U.: A review of light interception in plant stands from leaf to canopy in different plant functional types and in species with varying shade tolerance, Ecol. Res., 25, 693–714, 2010.
Oleson, K., Lawrence, D., Bonan, G., Drewniak, E., Huang, M., Koven, C., Levis, S., Li, F., Riley, W., Subin, Z., Swenson, S., Thornton, P., Bozbiyik, A., Fisher, R., Heald, C., Kluzek, E., Lamarque, J., Lawrence, P., Leung, L., Lipscomb, W., Muszala, S., Ricciuto, D., Sacks, W., Sun, Y., Tang, J., and Yang, Z.: Technical description of version 4.5 of the Community Land Model (CLM), NCAR Technical Note NCAR/TN-503+STR, 420 pp., https://doi.org/10.5065/D6RR1W7M, 2013.
Pappas, C., Fatichi, S., Rimkus, S., Burlando, P., and Huber, M. O.: The role of local scale heterogeneities in terrestrial ecosystem modeling, J. Geophys. Res.-Biogeo., 120, 341–360, 2015.
Pavlick, R., Drewry, D. T., Bohn, K., Reu, B., and Kleidon, A.: The Jena Diversity-Dynamic Global Vegetation Model (JeDi-DGVM): a diverse approach to representing terrestrial biogeography and biogeochemistry based on plant functional trade-offs, Biogeosciences, 10, 4137–4177, https://doi.org/10.5194/bg-10-4137-2013, 2013.
Pfeifer, M., Disney, M., Quaife, T., and Marchant, R.: Terrestrial ecosystems from space: a review of earth observation products for macroecology applications, Global Ecol. Biogeogr., 21, 603–624, 2012.
Powell, T. L., Galbraith, D. R., Christoffersen, B. O., Harper, A., Imbuzeiro, H. M. A., Rowland, L., Almeida, S., Brando, P. M., da Costa, A. C. L., Costa, M. H., Levine, N. M., Malhi, Y., Saleska, S. R., Sotta, E., Williams, M., Meir, P., and Moorcroft, P. R.: Confronting model predictions of carbon fluxes with measurements of Amazon forests subjected to experimental drought, New Phytol., 200, 350–365, 2013.
Prentice, I. C., Cramer, W., Harrison, S. P., Leemans, R., Monserud, R. A., and Solomon, A. M.: Special paper: a global biome model based on plant physiology and dominance, soil properties and climate, J. Biogeogr., 19, 117–134, 1992.
Prentice, I. C., Bondeau, A., Cramer, W., Harrison, S. P., Hickler, T., Lucht, W., Sitch, S., Smith, B., and Sykes, M. T.: Dynamic global vegetation modeling: quantifying terrestrial ecosystem responses to large-scale environmental change, in: Terrestrial ecosystems in a changing world, Springer, 175–192, 2007.
Purves, D. and Pacala, S.: Predictive models of forest dynamics, Science, 320, 1452–1453, 2008.
Purves, D. W., Lichstein, J. W., Strigul, N., and Pacala, S. W.: Predicting and understanding forest dynamics using a simple tractable model, Proc. Natl. Aca. Sci., 105, 17018–17022, 2008.
Qian, T., Dai, A., Trenberth, K. E., and Oleson, K. W.: Simulation of global land surface conditions from 1948 to 2004. Part I: Forcing data and evaluations, J. Hydrometeorol., 7, 953–975, 2006.
Quaife, T., Lewis, P., Disney, M., Lomas, M., Woodward, I., and Picard, G.: Coupling a canopy reflectance model with a global vegetation model, in: Geoscience and Remote Sensing Symposium, 2004, IGARSS'04, Proceedings, 2004 IEEE International, vol. 1, IEEE, 2004.
Randerson, J. T., Hoffman, F. M., Thornton, P. E., Mahowald, N. M., Lindsay, K., Lee, Y.-H., Nevison, C. D., Doney, S. C., Bonan, G., Stöckli, R., Covey, C., S. W., R., and Fung, I. Y.: Systematic assessment of terrestrial biogeochemistry in coupled climate–carbon models, Global Change Biol., 15, 2462–2484, 2009.
Rastetter, E. B.: Modeling coupled biogeochemical cycles, Front. Ecol. Environ., 9, 68–73, 2011.
Reich, P. B.: The world-wide fast–slow plant economics spectrum: a traits manifesto, J. Ecol., 102, 275–301, 2014.
Reich, P. B., Walters, M. B., and Ellsworth, D. S.: From tropics to tundra: global convergence in plant functioning, Proc. Natl. Aca. Sci., 94, 13730–13734, 1997.
Reich, P. B., Wright, I. J., and Lusk, C. H.: Predicting leaf physiology from simple plant and climate attributes: a global GLOPNET analysis, Ecol. Appl., 17, 1982–1988, 2007.
Reich, P. B., Rich, R. L., Lu, X., Wang, Y.-P., and Oleksyn, J.: Biogeographic variation in evergreen conifer needle longevity and impacts on boreal forest carbon cycle projections, Proc. Natl. Aca. Sci., 111, 13703–13708, 2014.
Reichstein, M., Bahn, M., Mahecha, M. D., Kattge, J., and Baldocchi, D. D.: Linking plant and ecosystem functional biogeography, Proc. Natl. Aca. Sci., 111, 13697–13702, 2014.
Reu, B., Zaehle, S., Proulx, R., Bohn, K., Kleidon, A., Pavlick, R., and Schmidtlein, S.: The role of plant functional trade-offs for biodiversity changes and biome shifts under scenarios of global climatic change, Global Ecol. Biogeogr., 20, 540–581, 2010.
Rogers, B. M., Randerson, J. T., and Bonan, G. B.: High-latitude cooling associated with landscape changes from North American boreal forest fires, Biogeosciences, 10, 699–718, https://doi.org/10.5194/bg-10-699-2013, 2013.
Running, S. W. and Hunt, E. R.: Generalization of a forest ecosystem process model for other biomes, BIOME-BGC, and an application for global-scale models, Scaling physiological processes: Leaf to globe, 141–158, 1993.
Ryan, M. G.: A simple method for estimating gross carbon budgets for vegetation in forest ecosystems, Tree Physiol., 9, 255–266, 1991.
Sanderson, B. M., Piani, C., Ingram, W., Stone, D., and Allen, M.: Towards constraining climate sensitivity by linear analysis of feedback patterns in thousands of perturbed-physics GCM simulations, Clim. Dynam., 30, 175–190, 2008.
Sargsyan, K., Safta, C., Najm, H. N., Debusschere, B. J., Ricciuto, D., and Thornton, P.: Dimensionality reduction for complex models via bayesian compressive sensing, Int. J. Uncertain. Quant., 4, 63–93, 2014.
Sato, H., Itoh, A., and Kohyama, T.: SEIB–DGVM: A new Dynamic Global Vegetation Model using a spatially explicit individual-based approach, Ecol. Model., 200, 279–307, 2007.
Scheiter, S., Langan, L., and Higgins, S. I.: Next-generation dynamic global vegetation models: learning from community ecology, New Phytol., 198, 957–969, 2013.
Scherstjanoi, M., Kaplan, J. O., Thürig, E., and Lischke, H.: GAPPARD: a computationally efficient method of approximating gap-scale disturbance in vegetation models, Geosci. Model Dev., 6, 1517–1542, https://doi.org/10.5194/gmd-6-1517-2013, 2013.
Scherstjanoi, M., Kaplan, J. O., and Lischke, H.: Application of a computationally efficient method to approximate gap model results with a probabilistic approach, Geosci. Model Dev., 7, 1543–1571, https://doi.org/10.5194/gmd-7-1543-2014, 2014.
Schwalm, C. R., Huntinzger, D. N., Michalak, A. M., Fisher, J. B., Kimball, J. S., Mueller, B., Zhang, K., and Zhang, Y.: Sensitivity of inferred climate model skill to evaluation decisions: a case study using CMIP5 evapotranspiration, Environ. Res. Lett., 8, 024028, https://doi.org/10.1088/1748-9326/8/2/024028, 2013.
Serbin, S. P., Singh, A., McNeil, B. E., Kingdon, C. C., and Townsend, P. A.: Spectroscopic determination of leaf morphological and biochemical traits for northern temperate and boreal tree species, Ecol. Appl., 24, 1651–1669, 2014.
Sitch, S., Smith, B., Prentice, I. C., Arneth, A., Bondeau, A., Cramer, W., Kaplan, J., Levis, S., Lucht, W., Sykes, M. T., Thonicke, K., and Venevsky, S.: Evaluation of ecosystem dynamics, plant geography and terrestrial carbon cycling in the LPJ dynamic global vegetation model, Global Change Biol., 9, 161–185, 2003.
Sitch, S., Huntingford, C., Gedney, N., Levy, P., Lomas, M., Piao, S., Betts, R., Ciais, P., Cox, P., Friedlingstein, P., Jones, C. D., Prentice, I. C., and Woodward, F. I.: Evaluation of the terrestrial carbon cycle, future plant geography and climate-carbon cycle feedbacks using five Dynamic Global Vegetation Models (DGVMs), Global Change Biol., 14, 2015–2039, 2008.
Smith, B., Prentice, I. C., and Sykes, M. T.: Representation of vegetation dynamics in the modelling of terrestrial ecosystems: comparing two contrasting approaches within European climate space, Global Ecol. Biogeogr., 10, 621–637, 2001.
Swann, A. L., Fung, I. Y., Levis, S., Bonan, G. B., and Doney, S. C.: Changes in Arctic vegetation amplify high-latitude warming through the greenhouse effect, Proc. Natl. Aca. Sci., 107, 1295–1300, 2010.
Swart, N. C., Fyfe, J. C., Hawkins, E., Kay, J. E., and Jahn, A.: Influence of internal variability on Arctic sea-ice trends, Nat. Climate Change, 5, 86–89, 2015.
Thomas, R. Q. and Williams, M.: A model using marginal efficiency of investment to analyze carbon and nitrogen interactions in terrestrial ecosystems (ACONITE Version 1), Geosci. Model Dev., 7, 2015–2037, https://doi.org/10.5194/gmd-7-2015-2014, 2014.
Thonicke, K., Spessa, A., Prentice, I. C., Harrison, S. P., Dong, L., and Carmona-Moreno, C.: The influence of vegetation, fire spread and fire behaviour on biomass burning and trace gas emissions: results from a process-based model, Biogeosciences, 7, 1991–2011, https://doi.org/10.5194/bg-7-1991-2010, 2010.
Uriarte, M., Canham, C. D., Thompson, J., Zimmerman, J. K., Murphy, L., Sabat, A. M., Fetcher, N., and Haines, B. L.: Natural disturbance and human land use as determinants of tropical forest dynamics: results from a forest simulator, Ecol. Monogr., 79, 423–443, 2009.
van Bodegom, P., Douma, J., Witte, J., Ordoñez, J., Bartholomeus, R., and Aerts, R.: Going beyond limitations of plant functional types when predicting global ecosystem–atmosphere fluxes: exploring the merits of traits-based approaches, Global Ecol. Biogeogr., 21, 625–636, 2012.
van Bodegom, P. M., Douma, J. C., and Verheijen, L. M.: A fully traits-based approach to modeling global vegetation distribution, Proc. Natl. Aca. Sci., 111, 13733–13738, 2014.
van Wijk, M. T. and Bouten, W.: Towards understanding tree root profiles: simulating hydrologically optimal strategies for root distribution, Hydrol. Earth Syst. Sci., 5, 629–644, https://doi.org/10.5194/hess-5-629-2001, 2001.
Van Wijk, M., Williams, M., Gough, L., Hobbie, S., and Shaver, G.: Luxury consumption of soil nutrients: a possible competitive strategy in above-ground and below-ground biomass allocation and root morphology for slow-growing arctic vegetation?, J. Ecol., 91, 664–676, 2003.
Verheijen, L. M., Brovkin, V., Aerts, R., Bönisch, G., Cornelissen, J. H. C., Kattge, J., Reich, P. B., Wright, I. J., and van Bodegom, P. M.: Impacts of trait variation through observed trait–climate relationships on performance of an Earth system model: a conceptual analysis, Biogeosciences, 10, 5497–5515, https://doi.org/10.5194/bg-10-5497-2013, 2013.
Violle, C., Reich, P. B., Pacala, S. W., Enquist, B. J., and Kattge, J.: The emergence and promise of functional biogeography, Proc. Natl. Aca. Sci., 111, 13690–13696, 2014.
Walker, A. P., Hanson, P. J., De Kauwe, M. G., Medlyn, B. E., Zaehle, S., Asao, S., Dietze, M., Hickler, T., Huntingford, C., Iversen, C. M., Jain, A., Lomas, M., Luo, Y., McCarthy, H., Parton, W. J., Prentice, I. C., Thornton, P. E., Wang, S., Wang, Y.-P., Warlind, D., Weng, E., Warren, J. M., Woodward, F. I., Oren, R., and Norby, R. J.: Comprehensive ecosystem model-data synthesis using multiple data sets at two temperate forest free-air CO2 enrichment experiments: Model performance at ambient CO2 concentration, J. Geophys. Res.-Biogeo., 119, 937–964, 2014.
Wang, Y., Lu, X., Wright, I., Dai, Y., Rayner, P., and Reich, P.: Correlations among leaf traits provide a significant constraint on the estimate of global gross primary production, Geophys. Res. Lett., 39, L19405, https://doi.org/10.1029/2012GL053461, 2012.
Warren, J. M., Hanson, P. J., Iversen, C. M., Kumar, J., Walker, A. P., and Wullschleger, S. D.: Root structural and functional dynamics in terrestrial biosphere models–evaluation and recommendations, New Phytol., 205, 59–78, 2015.
Watanabe, S., Hajima, T., Sudo, K., Nagashima, T., Takemura, T., Okajima, H., Nozawa, T., Kawase, H., Abe, M., Yokohata, T., Ise, T., Sato, H., Kato, E., Takata, K., Emori, S., and Kawamiya, M.: MIROC-ESM 2010: model description and basic results of CMIP5-20c3m experiments, Geosci. Model Dev., 4, 845–872, https://doi.org/10.5194/gmd-4-845-2011, 2011.
Weng, E. S., Malyshev, S., Lichstein, J. W., Farrior, C. E., Dybzinski, R., Zhang, T., Shevliakova, E., and Pacala, S. W.: Scaling from individual trees to forests in an Earth system modeling framework using a mathematically tractable model of height-structured competition, Biogeosciences, 12, 2655–2694, https://doi.org/10.5194/bg-12-2655-2015, 2015.
Westoby, M., Falster, D. S., Moles, A. T., Vesk, P. A., and Wright, I. J.: Plant ecological strategies: some leading dimensions of variation between species, Ann. Rev. Ecol. Syst., 33, 125–159, 2002.
Wettstein, J. J. and Deser, C.: Internal Variability in Projections of Twenty-First-Century Arctic Sea Ice Loss: Role of the Large-Scale Atmospheric Circulation, J. Climate, 27, 527–550, 2014.
Williams, M., Rastetter, E., Fernandes, D., Goulden, M., Wofsy, S., Shaver, G., Melillo, J., Munger, J., Fan, S.-M., and Nadelhoffer, K.: Modelling the soil-plant-atmosphere continuum in a Quercus–Acer stand at Harvard Forest: the regulation of stomatal conductance by light, nitrogen and soil/plant hydraulic properties, Plant Cell Environ., 19, 911–927, 1996.
Williams, M., Law, B. E., Anthoni, P. M., and Unsworth, M. H.: Use of a simulation model and ecosystem flux data to examine carbon–water interactions in ponderosa pine, Tree Physiol., 21, 287–298, 2001.
Woodward, F.: Climate and plant distribution, Cambridge University Press, 1987.
Woodward, F., Lomas, M., and Kelly, C.: Global climate and the distribution of plant biomes, Philos. Trans. Roy. Soc. Ser. B, 359, 1465–1476, 2004.
Wright, I. J., Reich, P. B., Westoby, M., Ackerly, D. D., Baruch, Z., Bongers, F., Cavender-Bares, J., Chapin, T., Cornelissen, J. H. C., Diemer, M., Flexas, J., Garnier, E., Groom, P. K., Gulias, J., Hikosaka, K., Lamont, B. B., Lee, T., Lee, W., Lusk, C., Midgley, J. J., Navas, M. L., Ni-inemets, U., Oleksyn, J., Osada, N., Poorter, H., Poot, P., Prior, L., Pyankov, V. I., Roumet, C., Thomas, S. C., Tjoelker, M. G., Veneklaas, E. J., and Villar, R.: The worldwide leaf economics spectrum, Nature, 428, 821–827, 2004.
Wullschleger, S. D., Epstein, H. E., Box, E. O., Euskirchen, E. S., Goswami, S., Iversen, C. M., Kattge, J., Norby, R. J., van Bodegom, P. M., and Xu, X.: Plant functional types in Earth system models: past experiences and future directions for application of dynamic vegetation models in high-latitude ecosystems, Ann. Botany, 114, 1–16, 2014.
Xu, C., Fisher, R., Wullschleger, S. D., Wilson, C. J., Cai, M., and McDowell, N. G.: Toward a mechanistic modeling of nitrogen limitation on vegetation dynamics, PloS one, 7, e37914, https://doi.org/10.1371/journal.pone.0037914, 2012.
Zaehle, S. and Friend, A.: Carbon and nitrogen cycle dynamics in the O-CN land surface model: 1. Model description, site-scale evaluation, and sensitivity to parameter estimates, Global Biogeochem. Cy., 24, GB1005, https://doi.org/10.1029/2009GB003521, 2010.
Zaehle, S., Medlyn, B. E., De Kauwe, M. G., Walker, A. P., Dietze, M. C., Hickler, T., Luo, Y., Wang, Y.-P., El-Masri, B., Thornton, P., Jain, A., Wang, S., Warlind, D., Weng, E., Parton, W., Iversen, C. M., Gallet-Budynek, A., McCarthy, H., Finzi, A., Hanson, P. J., Prentice, I. C., Oren, R., and Norby, R. J.: Evaluation of 11 terrestrial carbon–nitrogen cycle models against observations from two temperate Free-Air CO2 Enrichment studies, New Phytol., 202, 803–822, 2014.
Zurbriggen, N., Nabel, J., Teich, M., Bebi, P., and Lischke, H.: Explicit avalanche-forest feedback simulations improve the performance of a coupled avalanche-forest model, Ecol. Complex., 17, 56–66, 2014.
Short summary
Predicting the distribution of vegetation under novel climates is important, both to understand how climate change will impact ecosystem services, but also to understand how vegetation changes might affect the carbon, energy and water cycles. Historically, predictions have been heavily dependent upon observations of existing vegetation boundaries. In this paper, we attempt to predict ecosystem boundaries from the ``bottom up'', and illustrate the complexities and promise of this approach.
Predicting the distribution of vegetation under novel climates is important, both to understand...
