Articles | Volume 7, issue 5
https://doi.org/10.5194/gmd-7-2193-2014
© Author(s) 2014. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/gmd-7-2193-2014
© Author(s) 2014. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Development and technical paper
| 
30 Sep 2014
Development and technical paper |
| 30 Sep 2014
Modeling stomatal conductance in the earth system: linking leaf water-use efficiency and water transport along the soil–plant–atmosphere continuum
G. B. Bonan
National Center for Atmospheric Research, P.O. Box 3000, Boulder, Colorado, 80307, USA
M. Williams
School of GeoSciences, University of Edinburgh, Edinburgh, UK
R. A. Fisher
National Center for Atmospheric Research, P.O. Box 3000, Boulder, Colorado, 80307, USA
K. W. Oleson
National Center for Atmospheric Research, P.O. Box 3000, Boulder, Colorado, 80307, USA
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S. Sitch, P. Friedlingstein, N. Gruber, S. D. Jones, G. Murray-Tortarolo, A. Ahlström, S. C. Doney, H. Graven, C. Heinze, C. Huntingford, S. Levis, P. E. Levy, M. Lomas, B. Poulter, N. Viovy, S. Zaehle, N. Zeng, A. Arneth, G. Bonan, L. Bopp, J. G. Canadell, F. Chevallier, P. Ciais, R. Ellis, M. Gloor, P. Peylin, S. L. Piao, C. Le Quéré, B. Smith, Z. Zhu, and R. Myneni
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Biogeosciences, 11, 3899–3917, https://doi.org/10.5194/bg-11-3899-2014, https://doi.org/10.5194/bg-11-3899-2014, 2014
S. Levis, M. D. Hartman, and G. B. Bonan
Geosci. Model Dev., 7, 613–620, https://doi.org/10.5194/gmd-7-613-2014, https://doi.org/10.5194/gmd-7-613-2014, 2014
C. D. Koven, W. J. Riley, Z. M. Subin, J. Y. Tang, M. S. Torn, W. D. Collins, G. B. Bonan, D. M. Lawrence, and S. C. Swenson
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Preprint under review for ESSD
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Yan Yang, A. Anthony Bloom, Shuang Ma, Paul Levine, Alexander Norton, Nicholas C. Parazoo, John T. Reager, John Worden, Gregory R. Quetin, T. Luke Smallman, Mathew Williams, Liang Xu, and Sassan Saatchi
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Stephanie G. Stettz, Nicholas C. Parazoo, A. Anthony Bloom, Peter D. Blanken, David R. Bowling, Sean P. Burns, Cédric Bacour, Fabienne Maignan, Brett Raczka, Alexander J. Norton, Ian Baker, Mathew Williams, Mingjie Shi, Yongguang Zhang, and Bo Qiu
Biogeosciences, 19, 541–558, https://doi.org/10.5194/bg-19-541-2022, https://doi.org/10.5194/bg-19-541-2022, 2022
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Caroline A. Famiglietti, T. Luke Smallman, Paul A. Levine, Sophie Flack-Prain, Gregory R. Quetin, Victoria Meyer, Nicholas C. Parazoo, Stephanie G. Stettz, Yan Yang, Damien Bonal, A. Anthony Bloom, Mathew Williams, and Alexandra G. Konings
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Model uncertainty dominates the spread in terrestrial carbon cycle predictions. Efforts to reduce it typically involve adding processes, thereby increasing model complexity. However, if and how model performance scales with complexity is unclear. Using a suite of 16 structurally distinct carbon cycle models, we find that increased complexity only improves skill if parameters are adequately informed. Otherwise, it can degrade skill, and an intermediate-complexity model is optimal.
A. Anthony Bloom, Kevin W. Bowman, Junjie Liu, Alexandra G. Konings, John R. Worden, Nicholas C. Parazoo, Victoria Meyer, John T. Reager, Helen M. Worden, Zhe Jiang, Gregory R. Quetin, T. Luke Smallman, Jean-François Exbrayat, Yi Yin, Sassan S. Saatchi, Mathew Williams, and David S. Schimel
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We use a model of the 2001–2015 tropical land carbon cycle, with satellite measurements of land and atmospheric carbon, to disentangle lagged and concurrent effects (due to past and concurrent meteorological events, respectively) on annual land–atmosphere carbon exchanges. The variability of lagged effects explains most 2001–2015 inter-annual carbon flux variations. We conclude that concurrent and lagged effects need to be accurately resolved to better predict the world's land carbon sink.
Sophie Flack-Prain, Patrick Meir, Yadvinder Malhi, Thomas Luke Smallman, and Mathew Williams
Biogeosciences, 16, 4463–4484, https://doi.org/10.5194/bg-16-4463-2019, https://doi.org/10.5194/bg-16-4463-2019, 2019
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Across the Amazon rainforest, trees take in carbon through photosynthesis. However, photosynthesis across the basin is threatened by predicted shifts in rainfall patterns. To unpick how changes in rainfall affect photosynthesis, we use a model which combines climate data with our knowledge of photosynthesis and other plant processes. We find that stomatal constraints are less important, and instead shifts in leaf surface area and leaf properties drive changes in photosynthesis with rainfall.
Thomas Luke Smallman and Mathew Williams
Geosci. Model Dev., 12, 2227–2253, https://doi.org/10.5194/gmd-12-2227-2019, https://doi.org/10.5194/gmd-12-2227-2019, 2019
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Photosynthesis and evapotranspiration are processes with global significance for climate, carbon and water cycling. Process-orientated simulation of these processes and their interactions have till now come at high computational cost. Here we present a new coupled model of intermediate complexity operating at orders of magnitude greater speed. Independent evaluation at FLUXNET sites for a single, global parameterization shows good agreement, with a typical R2 value of ~ 0.60.
Efrén López-Blanco, Jean-François Exbrayat, Magnus Lund, Torben R. Christensen, Mikkel P. Tamstorf, Darren Slevin, Gustaf Hugelius, Anthony A. Bloom, and Mathew Williams
Earth Syst. Dynam., 10, 233–255, https://doi.org/10.5194/esd-10-233-2019, https://doi.org/10.5194/esd-10-233-2019, 2019
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The terrestrial CO2 exchange in Arctic ecosystems plays an important role in the global carbon cycle and is particularly sensitive to the ongoing warming experienced in recent years. To improve our understanding of the atmosphere–biosphere interplay, we evaluated the state of the terrestrial pan-Arctic carbon cycling using a promising data assimilation system in the first 15 years of the 21st century. This is crucial when it comes to making predictions about the future state of the carbon cycle.
Vasileios Myrgiotis, Mathew Williams, Robert M. Rees, and Cairistiona F. E. Topp
Biogeosciences, 16, 1641–1655, https://doi.org/10.5194/bg-16-1641-2019, https://doi.org/10.5194/bg-16-1641-2019, 2019
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This study focuses on a northwestern European cropland region and shows that the type of crop growing on a soil has notable effects on the emission of nitrous oxide (N2O – a greenhouse gas) from that soil. It was found that N2O emissions from soils under oilseed cultivation are significantly higher than soils under cereal cultivation. This variation is mostly explained by the fact that oilseeds require more nitrogen (fertiliser) than cereals, especially at early crop growth stages.
Anne Sofie Lansø, Thomas Luke Smallman, Jesper Heile Christensen, Mathew Williams, Kim Pilegaard, Lise-Lotte Sørensen, and Camilla Geels
Biogeosciences, 16, 1505–1524, https://doi.org/10.5194/bg-16-1505-2019, https://doi.org/10.5194/bg-16-1505-2019, 2019
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Emily D. White, Matthew Rigby, Mark F. Lunt, T. Luke Smallman, Edward Comyn-Platt, Alistair J. Manning, Anita L. Ganesan, Simon O'Doherty, Ann R. Stavert, Kieran Stanley, Mathew Williams, Peter Levy, Michel Ramonet, Grant L. Forster, Andrew C. Manning, and Paul I. Palmer
Atmos. Chem. Phys., 19, 4345–4365, https://doi.org/10.5194/acp-19-4345-2019, https://doi.org/10.5194/acp-19-4345-2019, 2019
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Understanding carbon dioxide (CO2) fluxes from the terrestrial biosphere on a national scale is important for evaluating land use strategies to mitigate climate change. We estimate emissions of CO2 from the UK biosphere using atmospheric data in a top-down approach. Our findings show that bottom-up estimates from models of biospheric fluxes overestimate the amount of CO2 uptake in summer. This suggests these models wrongly estimate or omit key processes, e.g. land disturbance due to harvest.
Gordon B. Bonan, Edward G. Patton, Ian N. Harman, Keith W. Oleson, John J. Finnigan, Yaqiong Lu, and Elizabeth A. Burakowski
Geosci. Model Dev., 11, 1467–1496, https://doi.org/10.5194/gmd-11-1467-2018, https://doi.org/10.5194/gmd-11-1467-2018, 2018
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Land surface models neglect the roughness sublayer and parameterize within-canopy turbulence in an ad hoc manner. We implemented a roughness sublayer parameterization in a multilayer canopy model to test if this theory provides a tractable parameterization extending from the ground through the canopy and the roughness sublayer. The multilayer canopy improves simulations compared with the Community Land Model (CLM4.5) while also advancing the theoretical basis for surface flux parameterizations.
Jean-François Exbrayat, A. Anthony Bloom, Pete Falloon, Akihiko Ito, T. Luke Smallman, and Mathew Williams
Earth Syst. Dynam., 9, 153–165, https://doi.org/10.5194/esd-9-153-2018, https://doi.org/10.5194/esd-9-153-2018, 2018
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We use global observations of current terrestrial net primary productivity (NPP) to constrain the uncertainty in large ensemble 21st century projections of NPP under a "business as usual" scenario using a skill-based multi-model averaging technique. Our results show that this procedure helps greatly reduce the uncertainty in global projections of NPP. We also identify regions where uncertainties in models and observations remain too large to confidently conclude a sign of the change of NPP.
Rhys Whitley, Jason Beringer, Lindsay B. Hutley, Gabriel Abramowitz, Martin G. De Kauwe, Bradley Evans, Vanessa Haverd, Longhui Li, Caitlin Moore, Youngryel Ryu, Simon Scheiter, Stanislaus J. Schymanski, Benjamin Smith, Ying-Ping Wang, Mathew Williams, and Qiang Yu
Biogeosciences, 14, 4711–4732, https://doi.org/10.5194/bg-14-4711-2017, https://doi.org/10.5194/bg-14-4711-2017, 2017
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This paper attempts to review some of the current challenges faced by the modelling community in simulating the behaviour of savanna ecosystems. We provide a particular focus on three dynamic processes (phenology, root-water access, and fire) that are characteristic of savannas, which we believe are not adequately represented in current-generation terrestrial biosphere models. We highlight reasons for these misrepresentations, possible solutions and a future direction for research in this area.
Efrén López-Blanco, Magnus Lund, Mathew Williams, Mikkel P. Tamstorf, Andreas Westergaard-Nielsen, Jean-François Exbrayat, Birger U. Hansen, and Torben R. Christensen
Biogeosciences, 14, 4467–4483, https://doi.org/10.5194/bg-14-4467-2017, https://doi.org/10.5194/bg-14-4467-2017, 2017
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An improvement in our process-based understanding of CO2 exchanges in the Arctic and their climate sensitivity is critical. With continued warming temperatures and longer growing seasons, tundra systems will likely increase rates of C cycling, although shifts in sink strength could take place, challenging the forecast of upcoming C states. In this context, we investigated the functional responses of C exchange to environmental characteristics across 8 consecutive years in West Greenland.
Darren Slevin, Simon F. B. Tett, Jean-François Exbrayat, A. Anthony Bloom, and Mathew Williams
Geosci. Model Dev., 10, 2651–2670, https://doi.org/10.5194/gmd-10-2651-2017, https://doi.org/10.5194/gmd-10-2651-2017, 2017
Bradley O. Christoffersen, Manuel Gloor, Sophie Fauset, Nikolaos M. Fyllas, David R. Galbraith, Timothy R. Baker, Bart Kruijt, Lucy Rowland, Rosie A. Fisher, Oliver J. Binks, Sanna Sevanto, Chonggang Xu, Steven Jansen, Brendan Choat, Maurizio Mencuccini, Nate G. McDowell, and Patrick Meir
Geosci. Model Dev., 9, 4227–4255, https://doi.org/10.5194/gmd-9-4227-2016, https://doi.org/10.5194/gmd-9-4227-2016, 2016
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We developed a plant hydraulics model for tropical forests based on established plant physiological theory, and parameterized it by conducting a pantropical hydraulic trait survey. We show that a substantial amount of trait diversity can be represented in the model by a reduced set of trait dimensions. The fully parameterized model is able capture tree-level variation in water status and improves simulations of total ecosystem transpiration, showing how to incorporate hydraulic traits in models.
Rhys Whitley, Jason Beringer, Lindsay B. Hutley, Gab Abramowitz, Martin G. De Kauwe, Remko Duursma, Bradley Evans, Vanessa Haverd, Longhui Li, Youngryel Ryu, Benjamin Smith, Ying-Ping Wang, Mathew Williams, and Qiang Yu
Biogeosciences, 13, 3245–3265, https://doi.org/10.5194/bg-13-3245-2016, https://doi.org/10.5194/bg-13-3245-2016, 2016
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In this study we assess how well terrestrial biosphere models perform at predicting water and carbon cycling for savanna ecosystems. We apply our models to five savanna sites in Northern Australia and highlight key causes for model failure. Our assessment of model performance uses a novel benchmarking system that scores a model’s predictive ability based on how well it is utilizing its driving information. On average, we found the models as a group display only moderate levels of performance.
A. A. Ali, C. Xu, A. Rogers, R. A. Fisher, S. D. Wullschleger, E. C. Massoud, J. A. Vrugt, J. D. Muss, N. G. McDowell, J. B. Fisher, P. B. Reich, and C. J. Wilson
Geosci. Model Dev., 9, 587–606, https://doi.org/10.5194/gmd-9-587-2016, https://doi.org/10.5194/gmd-9-587-2016, 2016
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We have developed a mechanistic model of leaf utilization of nitrogen for assimilation (LUNA V1.0) to predict the photosynthetic capacities at the global scale based on the optimization of key leaf-level metabolic processes. LUNA model predicts that future climatic changes would mostly affect plant photosynthetic capabilities in high-latitude regions and that Earth system models using fixed photosynthetic capabilities are likely to substantially overestimate future global photosynthesis.
R. A. Fisher, S. Muszala, M. Verteinstein, P. Lawrence, C. Xu, N. G. McDowell, R. G. Knox, C. Koven, J. Holm, B. M. Rogers, A. Spessa, D. Lawrence, and G. Bonan
Geosci. Model Dev., 8, 3593–3619, https://doi.org/10.5194/gmd-8-3593-2015, https://doi.org/10.5194/gmd-8-3593-2015, 2015
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Predicting the distribution of vegetation under novel climates is important, both to understand how climate change will impact ecosystem services, but also to understand how vegetation changes might affect the carbon, energy and water cycles. Historically, predictions have been heavily dependent upon observations of existing vegetation boundaries. In this paper, we attempt to predict ecosystem boundaries from the ``bottom up'', and illustrate the complexities and promise of this approach.
C. Safta, D. M. Ricciuto, K. Sargsyan, B. Debusschere, H. N. Najm, M. Williams, and P. E. Thornton
Geosci. Model Dev., 8, 1899–1918, https://doi.org/10.5194/gmd-8-1899-2015, https://doi.org/10.5194/gmd-8-1899-2015, 2015
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In this paper we propose a probabilistic framework for an uncertainty quantification study of a carbon cycle model and focus on the comparison between steady-state and transient
simulation setups. We study model parameters via global sensitivity analysis and employ a Bayesian approach to calibrate these parameters using NEE observations at the Harvard Forest site. The calibration results are then used to assess the predictive skill of the model via posterior predictive checks.
W. R. Wieder, A. S. Grandy, C. M. Kallenbach, P. G. Taylor, and G. B. Bonan
Geosci. Model Dev., 8, 1789–1808, https://doi.org/10.5194/gmd-8-1789-2015, https://doi.org/10.5194/gmd-8-1789-2015, 2015
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Projecting biogeochemical responses to environmental change requires multi-scaled perspectives. However, microbes, the drivers of soil organic matter decomposition and stabilization, remain notably absent from models used to project carbon cycle–climate feedbacks. Here, we apply and evaluate representations of microbial functional diversity across scales and find that such representations may be critical to accurately project soil carbon dynamics in a changing world.
L. Rowland, A. Harper, B. O. Christoffersen, D. R. Galbraith, H. M. A. Imbuzeiro, T. L. Powell, C. Doughty, N. M. Levine, Y. Malhi, S. R. Saleska, P. R. Moorcroft, P. Meir, and M. Williams
Geosci. Model Dev., 8, 1097–1110, https://doi.org/10.5194/gmd-8-1097-2015, https://doi.org/10.5194/gmd-8-1097-2015, 2015
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This study evaluates the capability of five vegetation models to simulate the response of forest productivity to changes in temperature and drought, using data collected from an Amazonian forest. This study concludes that model consistencies in the responses of net canopy carbon production to temperature and precipitation change were the result of inconsistently modelled leaf-scale process responses and substantial variation in modelled leaf area responses.
A. A. Bloom and M. Williams
Biogeosciences, 12, 1299–1315, https://doi.org/10.5194/bg-12-1299-2015, https://doi.org/10.5194/bg-12-1299-2015, 2015
D. Slevin, S. F. B. Tett, and M. Williams
Geosci. Model Dev., 8, 295–316, https://doi.org/10.5194/gmd-8-295-2015, https://doi.org/10.5194/gmd-8-295-2015, 2015
J. R. Buzan, K. Oleson, and M. Huber
Geosci. Model Dev., 8, 151–170, https://doi.org/10.5194/gmd-8-151-2015, https://doi.org/10.5194/gmd-8-151-2015, 2015
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We implemented the HumanIndexMod, which calculates 13 diagnostic heat stress metrics, into the Community Land Model (CLM4.5). The goal of this module is to have a common predictive framework for measuring heat stress globally. These metrics are in operational use by weather forecasters, industry, and agriculture. We show metric-dependent results of regional partitioning of extreme moisture and temperature levels in a 1901-2010 simulation.
S. Sitch, P. Friedlingstein, N. Gruber, S. D. Jones, G. Murray-Tortarolo, A. Ahlström, S. C. Doney, H. Graven, C. Heinze, C. Huntingford, S. Levis, P. E. Levy, M. Lomas, B. Poulter, N. Viovy, S. Zaehle, N. Zeng, A. Arneth, G. Bonan, L. Bopp, J. G. Canadell, F. Chevallier, P. Ciais, R. Ellis, M. Gloor, P. Peylin, S. L. Piao, C. Le Quéré, B. Smith, Z. Zhu, and R. Myneni
Biogeosciences, 12, 653–679, https://doi.org/10.5194/bg-12-653-2015, https://doi.org/10.5194/bg-12-653-2015, 2015
R. Q. Thomas and M. Williams
Geosci. Model Dev., 7, 2015–2037, https://doi.org/10.5194/gmd-7-2015-2014, https://doi.org/10.5194/gmd-7-2015-2014, 2014
G. Xenakis and M. Williams
Geosci. Model Dev., 7, 1519–1533, https://doi.org/10.5194/gmd-7-1519-2014, https://doi.org/10.5194/gmd-7-1519-2014, 2014
W. R. Wieder, A. S. Grandy, C. M. Kallenbach, and G. B. Bonan
Biogeosciences, 11, 3899–3917, https://doi.org/10.5194/bg-11-3899-2014, https://doi.org/10.5194/bg-11-3899-2014, 2014
S. Levis, M. D. Hartman, and G. B. Bonan
Geosci. Model Dev., 7, 613–620, https://doi.org/10.5194/gmd-7-613-2014, https://doi.org/10.5194/gmd-7-613-2014, 2014
T. L. Smallman, M. Williams, and J. B. Moncrieff
Biogeosciences, 11, 735–747, https://doi.org/10.5194/bg-11-735-2014, https://doi.org/10.5194/bg-11-735-2014, 2014
C. D. Koven, W. J. Riley, Z. M. Subin, J. Y. Tang, M. S. Torn, W. D. Collins, G. B. Bonan, D. M. Lawrence, and S. C. Swenson
Biogeosciences, 10, 7109–7131, https://doi.org/10.5194/bg-10-7109-2013, https://doi.org/10.5194/bg-10-7109-2013, 2013
D. Lombardozzi, J. P. Sparks, and G. Bonan
Biogeosciences, 10, 6815–6831, https://doi.org/10.5194/bg-10-6815-2013, https://doi.org/10.5194/bg-10-6815-2013, 2013
R. Q. Thomas, G. B. Bonan, and C. L. Goodale
Biogeosciences, 10, 3869–3887, https://doi.org/10.5194/bg-10-3869-2013, https://doi.org/10.5194/bg-10-3869-2013, 2013
B. M. Rogers, J. T. Randerson, and G. B. Bonan
Biogeosciences, 10, 699–718, https://doi.org/10.5194/bg-10-699-2013, https://doi.org/10.5194/bg-10-699-2013, 2013
Related subject area
Climate and Earth system modeling
Introducing a new floodplain scheme in ORCHIDEE (version 7885): validation and evaluation over the Pantanal wetlands
URock 2023a: an open-source GIS-based wind model for complex urban settings
DASH: a MATLAB toolbox for paleoclimate data assimilation
Comparing the Performance of Julia on CPUs versus GPUs and Julia-MPI versus Fortran-MPI: a case study with MPAS-Ocean (Version 7.1)
All aboard! Earth system investigations with the CH2O-CHOO TRAIN v1.0
The Canadian Atmospheric Model version 5 (CanAM5.0.3)
The Teddy tool v1.1: temporal disaggregation of daily climate model data for climate impact analysis
Assimilation of the AMSU-A radiances using the CESM (v2.1.0) and the DART (v9.11.13)–RTTOV (v12.3)
Modernizing the open-source community Noah with multi-parameterization options (Noah-MP) land surface model (version 5.0) with enhanced modularity, interoperability, and applicability
Simulated stable water isotopes during the mid-Holocene and pre-industrial periods using AWI-ESM-2.1-wiso
Rainbows and climate change: a tutorial on climate model diagnostics and parameterization
ModE-Sim – a medium-sized atmospheric general circulation model (AGCM) ensemble to study climate variability during the modern era (1420 to 2009)
MESMAR v1: a new regional coupled climate model for downscaling, predictability, and data assimilation studies in the Mediterranean region
Climate model Selection by Independence, Performance, and Spread (ClimSIPS v1.0.1) for regional applications
IceTFT v1.0.0: interpretable long-term prediction of Arctic sea ice extent with deep learning
The KNMI Large Ensemble Time Slice (KNMI–LENTIS)
ENSO statistics, teleconnections, and atmosphere–ocean coupling in the Taiwan Earth System Model version 1
Using probabilistic machine learning to better model temporal patterns in parameterizations: a case study with the Lorenz 96 model
The Regional Aerosol Model Intercomparison Project (RAMIP)
DSCIM-Coastal v1.1: an open-source modeling platform for global impacts of sea level rise
TIMBER v0.1: a conceptual framework for emulating temperature responses to tree cover change
Recalibration of a three-dimensional water quality model with a newly developed autocalibration toolkit (EFDC-ACT v1.0.0): how much improvement will be achieved with a wider hydrological variability?
Description and evaluation of the JULES-ES set-up for ISIMIP2b
Simplified Kalman smoother and ensemble Kalman smoother for improving reanalyses
Modelling the terrestrial nitrogen and phosphorus cycle in the UVic ESCM
Modeling river water temperature with limiting forcing data: Air2stream v1.0.0, machine learning and multiple regression
A machine learning approach targeting parameter estimation for plant functional type coexistence modeling using ELM-FATES (v2.0)
Modeling and evaluating the effects of irrigation on land-atmosphere interaction in South-West Europe with the regional climate model REMO2020-iMOVE using a newly developed parameterization
The fully coupled regionally refined model of E3SM version 2: overview of the atmosphere, land, and river results
The mixed-layer depth in the Ocean Model Intercomparison Project (OMIP): impact of resolving mesoscale eddies
A new simplified parameterization of secondary organic aerosol in the Community Earth System Model Version 2 (CESM2; CAM6.3)
Deep learning for stochastic precipitation generation – deep SPG v1.0
Developing spring wheat in the Noah-MP land surface model (v4.4) for growing season dynamics and responses to temperature stress
Robust 4D climate-optimal flight planning in structured airspace using parallelized simulation on GPUs: ROOST V1.0
The Earth system model CLIMBER-X v1.0 – Part 2: The global carbon cycle
SMLFire1.0: a stochastic machine learning (SML) model for wildfire activity in the western United States
LandInG 1.0: a toolbox to derive input datasets for terrestrial ecosystem modelling at variable resolutions from heterogeneous sources
Conservation of heat and mass in P-SKRIPS version 1: the coupled atmosphere–ice–ocean model of the Ross Sea
Predicting the climate impact of aviation for en-route emissions: the algorithmic climate change function submodel ACCF 1.0 of EMAC 2.53
Implementation of a machine-learned gas optics parameterization in the ECMWF Integrated Forecasting System: RRTMGP-NN 2.0
Differentiable programming for Earth system modeling
Evaluation of CMIP6 model performances in simulating fire weather spatiotemporal variability on global and regional scales
Data-driven aeolian dust emission scheme for climate modelling evaluated with EMAC 2.55.2
Testing the reconstruction of modelled particulate organic carbon from surface ecosystem components using PlankTOM12 and machine learning
An improved method of the Globally Resolved Energy Balance model by the Bayesian networks
Assessing predicted cirrus ice properties between two deterministic ice formation parameterizations
Various ways of using empirical orthogonal functions for climate model evaluation
C-Coupler3.0: an integrated coupler infrastructure for Earth system modelling
FEOTS v0.0.0: a new offline code for the fast equilibration of tracers in the ocean
Pace v0.2: a Python-based performance-portable atmospheric model
Anthony Schrapffer, Jan Polcher, Anna Sörensson, and Lluís Fita
Geosci. Model Dev., 16, 5755–5782, https://doi.org/10.5194/gmd-16-5755-2023, https://doi.org/10.5194/gmd-16-5755-2023, 2023
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The present paper introduces a floodplain scheme for a high-resolution land surface model river routing. It was developed and evaluated over one of the world’s largest floodplains: the Pantanal in South America. This shows the impact of tropical floodplains on land surface conditions (soil moisture, temperature) and on land–atmosphere fluxes and highlights the potential impact of floodplains on land–atmosphere interactions and the importance of integrating this module in coupled simulations.
Jérémy Bernard, Fredrik Lindberg, and Sandro Oswald
Geosci. Model Dev., 16, 5703–5727, https://doi.org/10.5194/gmd-16-5703-2023, https://doi.org/10.5194/gmd-16-5703-2023, 2023
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The UMEP plug-in integrated in the free QGIS software can now calculate the spatial variation of the wind speed within urban settings. This paper shows that the new wind model, URock, generally fits observations well and highlights the main needed improvements. According to this work, pedestrian wind fields and outdoor thermal comfort can now simply be estimated by any QGIS user (researchers, students, and practitioners).
Jonathan King, Jessica Tierney, Matthew Osman, Emily J. Judd, and Kevin J. Anchukaitis
Geosci. Model Dev., 16, 5653–5683, https://doi.org/10.5194/gmd-16-5653-2023, https://doi.org/10.5194/gmd-16-5653-2023, 2023
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Paleoclimate data assimilation is a useful method that allows researchers to combine climate models with natural archives of past climates. However, it can be difficult to implement in practice. To facilitate this method, we present DASH, a MATLAB toolbox. The toolbox provides routines that implement common steps of paleoclimate data assimilation, and it can be used to implement assimilations for a wide variety of time periods, spatial regions, data networks, and analytical algorithms.
Siddhartha Bishnu, Robert R. Strauss, and Mark R. Petersen
Geosci. Model Dev., 16, 5539–5559, https://doi.org/10.5194/gmd-16-5539-2023, https://doi.org/10.5194/gmd-16-5539-2023, 2023
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Here we test Julia, a relatively new programming language, which is designed to be simple to write, but also fast on advanced computer architectures. We found that Julia is both convenient and fast, but there is no free lunch. Our first attempt to develop an ocean model in Julia was relatively easy, but the code was slow. After several months of further development, we created a Julia code that is as fast on supercomputers as a Fortran ocean model.
Tyler Kukla, Daniel E. Ibarra, Kimberly V. Lau, and Jeremy K. C. Rugenstein
Geosci. Model Dev., 16, 5515–5538, https://doi.org/10.5194/gmd-16-5515-2023, https://doi.org/10.5194/gmd-16-5515-2023, 2023
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The CH2O-CHOO TRAIN model can simulate how climate and the long-term carbon cycle interact across millions of years on a standard PC. While efficient, the model accounts for many factors including the location of land masses, the spatial pattern of the water cycle, and fundamental climate feedbacks. The model is a powerful tool for investigating how short-term climate processes can affect long-term changes in the Earth system.
Jason Neil Steven Cole, Knut von Salzen, Jiangnan Li, John Scinocca, David Plummer, Vivek Arora, Norman McFarlane, Michael Lazare, Murray MacKay, and Diana Verseghy
Geosci. Model Dev., 16, 5427–5448, https://doi.org/10.5194/gmd-16-5427-2023, https://doi.org/10.5194/gmd-16-5427-2023, 2023
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The Canadian Atmospheric Model version 5 (CanAM5) is used to simulate on a global scale the climate of Earth's atmosphere, land, and lakes. We document changes to the physics in CanAM5 since the last major version of the model (CanAM4) and evaluate the climate simulated relative to observations and CanAM4. The climate simulated by CanAM5 is similar to CanAM4, but there are improvements, including better simulation of temperature and precipitation over the Amazon and better simulation of cloud.
Florian Zabel and Benjamin Poschlod
Geosci. Model Dev., 16, 5383–5399, https://doi.org/10.5194/gmd-16-5383-2023, https://doi.org/10.5194/gmd-16-5383-2023, 2023
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Today, most climate model data are provided at daily time steps. However, more and more models from different sectors, such as energy, water, agriculture, and health, require climate information at a sub-daily temporal resolution for a more robust and reliable climate impact assessment. Here we describe and validate the Teddy tool, a new model for the temporal disaggregation of daily climate model data for climate impact analysis.
Young-Chan Noh, Yonghan Choi, Hyo-Jong Song, Kevin Raeder, Joo-Hong Kim, and Youngchae Kwon
Geosci. Model Dev., 16, 5365–5382, https://doi.org/10.5194/gmd-16-5365-2023, https://doi.org/10.5194/gmd-16-5365-2023, 2023
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This is the first attempt to assimilate the observations of microwave temperature sounders into the global climate forecast model in which the satellite observations have not been assimilated in the past. To do this, preprocessing schemes are developed to make the satellite observations suitable to be assimilated. In the assimilation experiments, the model analysis is significantly improved by assimilating the observations of microwave temperature sounders.
Cenlin He, Prasanth Valayamkunnath, Michael Barlage, Fei Chen, David Gochis, Ryan Cabell, Tim Schneider, Roy Rasmussen, Guo-Yue Niu, Zong-Liang Yang, Dev Niyogi, and Michael Ek
Geosci. Model Dev., 16, 5131–5151, https://doi.org/10.5194/gmd-16-5131-2023, https://doi.org/10.5194/gmd-16-5131-2023, 2023
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Noah-MP is one of the most widely used open-source community land surface models in the world, designed for applications ranging from uncoupled land surface and ecohydrological process studies to coupled numerical weather prediction and decadal climate simulations. To facilitate model developments and applications, we modernize Noah-MP by adopting modern Fortran code and data structures and standards, which substantially enhance model modularity, interoperability, and applicability.
Xiaoxu Shi, Alexandre Cauquoin, Gerrit Lohmann, Lukas Jonkers, Qiang Wang, Hu Yang, Yuchen Sun, and Martin Werner
Geosci. Model Dev., 16, 5153–5178, https://doi.org/10.5194/gmd-16-5153-2023, https://doi.org/10.5194/gmd-16-5153-2023, 2023
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We developed a new climate model with isotopic capabilities and simulated the pre-industrial and mid-Holocene periods. Despite certain regional model biases, the modeled isotope composition is in good agreement with observations and reconstructions. Based on our analyses, the observed isotope–temperature relationship in polar regions may have a summertime bias. Using daily model outputs, we developed a novel isotope-based approach to determine the onset date of the West African summer monsoon.
Andrew Gettelman
Geosci. Model Dev., 16, 4937–4956, https://doi.org/10.5194/gmd-16-4937-2023, https://doi.org/10.5194/gmd-16-4937-2023, 2023
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A representation of rainbows is developed for a climate model. The diagnostic raises many common issues. Simulated rainbows are evaluated against limited observations. The pattern of rainbows in the model matches observations and theory about when and where rainbows are most common. The diagnostic is used to assess the past and future state of rainbows. Changes to clouds from climate change are expected to increase rainbows as cloud cover decreases in a warmer world.
Ralf Hand, Eric Samakinwa, Laura Lipfert, and Stefan Brönnimann
Geosci. Model Dev., 16, 4853–4866, https://doi.org/10.5194/gmd-16-4853-2023, https://doi.org/10.5194/gmd-16-4853-2023, 2023
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ModE-Sim is an ensemble of simulations with an atmosphere model. It uses observed sea surface temperatures, sea ice conditions, and volcanic aerosols for 1420 to 2009 as model input while accounting for uncertainties in these conditions. This generates several representations of the possible climate given these preconditions. Such a setup can be useful to understand the mechanisms that contribute to climate variability. This paper describes the setup of ModE-Sim and evaluates its performance.
Andrea Storto, Yassmin Hesham Essa, Vincenzo de Toma, Alessandro Anav, Gianmaria Sannino, Rosalia Santoleri, and Chunxue Yang
Geosci. Model Dev., 16, 4811–4833, https://doi.org/10.5194/gmd-16-4811-2023, https://doi.org/10.5194/gmd-16-4811-2023, 2023
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Regional climate models are a fundamental tool for a very large number of applications and are being increasingly used within climate services, together with other complementary approaches. Here, we introduce a new regional coupled model, intended to be later extended to a full Earth system model, for climate investigations within the Mediterranean region, coupled data assimilation experiments, and several downscaling exercises (reanalyses and long-range predictions).
Anna L. Merrifield, Lukas Brunner, Ruth Lorenz, Vincent Humphrey, and Reto Knutti
Geosci. Model Dev., 16, 4715–4747, https://doi.org/10.5194/gmd-16-4715-2023, https://doi.org/10.5194/gmd-16-4715-2023, 2023
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Using all Coupled Model Intercomparison Project (CMIP) models is unfeasible for many applications. We provide a subselection protocol that balances user needs for model independence, performance, and spread capturing CMIP’s projection uncertainty simultaneously. We show how sets of three to five models selected for European applications map to user priorities. An audit of model independence and its influence on equilibrium climate sensitivity uncertainty in CMIP is also presented.
Bin Mu, Xiaodan Luo, Shijin Yuan, and Xi Liang
Geosci. Model Dev., 16, 4677–4697, https://doi.org/10.5194/gmd-16-4677-2023, https://doi.org/10.5194/gmd-16-4677-2023, 2023
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To improve the long-term forecast skill for sea ice extent (SIE), we introduce IceTFT, which directly predicts 12 months of averaged Arctic SIE. The results show that IceTFT has higher forecasting skill. We conducted a sensitivity analysis of the variables in the IceTFT model. These sensitivities can help researchers study the mechanisms of sea ice development, and they also provide useful references for the selection of variables in data assimilation or the input of deep learning models.
Laura Muntjewerf, Richard Bintanja, Thomas Reerink, and Karin van der Wiel
Geosci. Model Dev., 16, 4581–4597, https://doi.org/10.5194/gmd-16-4581-2023, https://doi.org/10.5194/gmd-16-4581-2023, 2023
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The KNMI Large Ensemble Time Slice (KNMI–LENTIS) is a large ensemble of global climate model simulations with EC-Earth3. It covers two climate scenarios by focusing on two time slices: the present day (2000–2009) and a future +2 K climate (2075–2084 in the SSP2-4.5 scenario). We have 1600 simulated years for the two climates with (sub-)daily output frequency. The sampled climate variability allows for robust and in-depth research into (compound) extreme events such as heat waves and droughts.
Yi-Chi Wang, Wan-Ling Tseng, Yu-Luen Chen, Shih-Yu Lee, Huang-Hsiung Hsu, and Hsin-Chien Liang
Geosci. Model Dev., 16, 4599–4616, https://doi.org/10.5194/gmd-16-4599-2023, https://doi.org/10.5194/gmd-16-4599-2023, 2023
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This study focuses on evaluating the performance of the Taiwan Earth System Model version 1 (TaiESM1) in simulating the El Niño–Southern Oscillation (ENSO), a significant tropical climate pattern with global impacts. Our findings reveal that TaiESM1 effectively captures several characteristics of ENSO, such as its seasonal variation and remote teleconnections. Its pronounced ENSO strength bias is also thoroughly investigated, aiming to gain insights to improve climate model performance.
Raghul Parthipan, Hannah M. Christensen, J. Scott Hosking, and Damon J. Wischik
Geosci. Model Dev., 16, 4501–4519, https://doi.org/10.5194/gmd-16-4501-2023, https://doi.org/10.5194/gmd-16-4501-2023, 2023
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How can we create better climate models? We tackle this by proposing a data-driven successor to the existing approach for capturing key temporal trends in climate models. We combine probability, allowing us to represent uncertainty, with machine learning, a technique to learn relationships from data which are undiscoverable to humans. Our model is often superior to existing baselines when tested in a simple atmospheric simulation.
Laura J. Wilcox, Robert J. Allen, Bjørn H. Samset, Massimo A. Bollasina, Paul T. Griffiths, James Keeble, Marianne T. Lund, Risto Makkonen, Joonas Merikanto, Declan O'Donnell, David J. Paynter, Geeta G. Persad, Steven T. Rumbold, Toshihiko Takemura, Kostas Tsigaridis, Sabine Undorf, and Daniel M. Westervelt
Geosci. Model Dev., 16, 4451–4479, https://doi.org/10.5194/gmd-16-4451-2023, https://doi.org/10.5194/gmd-16-4451-2023, 2023
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Changes in anthropogenic aerosol emissions have strongly contributed to global and regional climate change. However, the size of these regional impacts and the way they arise are still uncertain. With large changes in aerosol emissions a possibility over the next few decades, it is important to better quantify the potential role of aerosol in future regional climate change. The Regional Aerosol Model Intercomparison Project will deliver experiments designed to facilitate this.
Nicholas Depsky, Ian Bolliger, Daniel Allen, Jun Ho Choi, Michael Delgado, Michael Greenstone, Ali Hamidi, Trevor Houser, Robert E. Kopp, and Solomon Hsiang
Geosci. Model Dev., 16, 4331–4366, https://doi.org/10.5194/gmd-16-4331-2023, https://doi.org/10.5194/gmd-16-4331-2023, 2023
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This work presents a novel open-source modeling platform for evaluating future sea level rise (SLR) impacts. Using nearly 10 000 discrete coastline segments around the world, we estimate 21st-century costs for 230 SLR and socioeconomic scenarios. We find that annual end-of-century costs range from USD 100 billion under a 2 °C warming scenario with proactive adaptation to 7 trillion under a 4 °C warming scenario with minimal adaptation, illustrating the cost-effectiveness of coastal adaptation.
Shruti Nath, Lukas Gudmundsson, Jonas Schwaab, Gregory Duveiller, Steven J. De Hertog, Suqi Guo, Felix Havermann, Fei Luo, Iris Manola, Julia Pongratz, Sonia I. Seneviratne, Carl F. Schleussner, Wim Thiery, and Quentin Lejeune
Geosci. Model Dev., 16, 4283–4313, https://doi.org/10.5194/gmd-16-4283-2023, https://doi.org/10.5194/gmd-16-4283-2023, 2023
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Tree cover changes play a significant role in climate mitigation and adaptation. Their regional impacts are key in informing national-level decisions and prioritising areas for conservation efforts. We present a first step towards exploring these regional impacts using a simple statistical device, i.e. emulator. The emulator only needs to train on climate model outputs representing the maximal impacts of aff-, re-, and deforestation, from which it explores plausible in-between outcomes itself.
Chen Zhang and Tianyu Fu
Geosci. Model Dev., 16, 4315–4329, https://doi.org/10.5194/gmd-16-4315-2023, https://doi.org/10.5194/gmd-16-4315-2023, 2023
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A new automatic calibration toolkit was developed and implemented into the recalibration of a 3-D water quality model, with observations in a wider range of hydrological variability. Compared to the model calibrated with the original strategy, the recalibrated model performed significantly better in modeled total phosphorus, chlorophyll a, and dissolved oxygen. Our work indicates that hydrological variability in the calibration periods has a non-negligible impact on the water quality models.
Camilla Mathison, Eleanor Burke, Andrew J. Hartley, Douglas I. Kelley, Chantelle Burton, Eddy Robertson, Nicola Gedney, Karina Williams, Andy Wiltshire, Richard J. Ellis, Alistair A. Sellar, and Chris D. Jones
Geosci. Model Dev., 16, 4249–4264, https://doi.org/10.5194/gmd-16-4249-2023, https://doi.org/10.5194/gmd-16-4249-2023, 2023
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This paper describes and evaluates a new modelling methodology to quantify the impacts of climate change on water, biomes and the carbon cycle. We have created a new configuration and set-up for the JULES-ES land surface model, driven by bias-corrected historical and future climate model output provided by the Inter-Sectoral Impacts Model Intercomparison Project (ISIMIP). This allows us to compare projections of the impacts of climate change across multiple impact models and multiple sectors.
Bo Dong, Ross Bannister, Yumeng Chen, Alison Fowler, and Keith Haines
Geosci. Model Dev., 16, 4233–4247, https://doi.org/10.5194/gmd-16-4233-2023, https://doi.org/10.5194/gmd-16-4233-2023, 2023
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Traditional Kalman smoothers are expensive to apply in large global ocean operational forecast and reanalysis systems. We develop a cost-efficient method to overcome the technical constraints and to improve the performance of existing reanalysis products.
Makcim L. De Sisto, Andrew H. MacDougall, Nadine Mengis, and Sophia Antoniello
Geosci. Model Dev., 16, 4113–4136, https://doi.org/10.5194/gmd-16-4113-2023, https://doi.org/10.5194/gmd-16-4113-2023, 2023
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In this study, we developed a nitrogen and phosphorus cycle in an intermediate-complexity Earth system climate model. We found that the implementation of nutrient limitation in simulations has reduced the capacity of land to take up atmospheric carbon and has decreased the vegetation biomass, hence, improving the fidelity of the response of land to simulated atmospheric CO2 rise.
Manuel C. Almeida and Pedro S. Coelho
Geosci. Model Dev., 16, 4083–4112, https://doi.org/10.5194/gmd-16-4083-2023, https://doi.org/10.5194/gmd-16-4083-2023, 2023
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Water temperature (WT) datasets of low-order rivers are scarce. In this study, five different models are used to predict the WT of 83 rivers. Generally, the results show that the models' hyperparameter optimization is essential and that to minimize the prediction error it is relevant to apply all the models considered in this study. Results also show that there is a logarithmic correlation among the error of the predicted river WT and the watershed time of concentration.
Lingcheng Li, Yilin Fang, Zhonghua Zheng, Mingjie Shi, Marcos Longo, Charles D. Koven, Jennifer A. Holm, Rosie A. Fisher, Nate G. McDowell, Jeffrey Chambers, and L. Ruby Leung
Geosci. Model Dev., 16, 4017–4040, https://doi.org/10.5194/gmd-16-4017-2023, https://doi.org/10.5194/gmd-16-4017-2023, 2023
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Accurately modeling plant coexistence in vegetation demographic models like ELM-FATES is challenging. This study proposes a repeatable method that uses machine-learning-based surrogate models to optimize plant trait parameters in ELM-FATES. Our approach significantly improves plant coexistence modeling, thus reducing errors. It has important implications for modeling ecosystem dynamics in response to climate change.
Christina Asmus, Peter Hoffmann, Joni-Pekka Pietikäinen, Jürgen Böhner, and Diana Rechid
EGUsphere, https://doi.org/10.5194/egusphere-2023-890, https://doi.org/10.5194/egusphere-2023-890, 2023
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Irrigation modifies the land surface and soil conditions. The caused effects can be quantified using numerical climate models. Our study introduces a new irrigation parameterization, which is simulating the effects of irrigation on land, atmosphere, and vegetation. We applied the parameterization and evaluated the results in their physical consistency. We found an improvement in the model results in the 2 m temperature representation in comparison with observational data for our study.
Qi Tang, Jean-Christophe Golaz, Luke P. Van Roekel, Mark A. Taylor, Wuyin Lin, Benjamin R. Hillman, Paul A. Ullrich, Andrew M. Bradley, Oksana Guba, Jonathan D. Wolfe, Tian Zhou, Kai Zhang, Xue Zheng, Yunyan Zhang, Meng Zhang, Mingxuan Wu, Hailong Wang, Cheng Tao, Balwinder Singh, Alan M. Rhoades, Yi Qin, Hong-Yi Li, Yan Feng, Yuying Zhang, Chengzhu Zhang, Charles S. Zender, Shaocheng Xie, Erika L. Roesler, Andrew F. Roberts, Azamat Mametjanov, Mathew E. Maltrud, Noel D. Keen, Robert L. Jacob, Christiane Jablonowski, Owen K. Hughes, Ryan M. Forsyth, Alan V. Di Vittorio, Peter M. Caldwell, Gautam Bisht, Renata B. McCoy, L. Ruby Leung, and David C. Bader
Geosci. Model Dev., 16, 3953–3995, https://doi.org/10.5194/gmd-16-3953-2023, https://doi.org/10.5194/gmd-16-3953-2023, 2023
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High-resolution simulations are superior to low-resolution ones in capturing regional climate changes and climate extremes. However, uniformly reducing the grid size of a global Earth system model is too computationally expensive. We provide an overview of the fully coupled regionally refined model (RRM) of E3SMv2 and document a first-of-its-kind set of climate production simulations using RRM at an economic cost. The key to this success is our innovative hybrid time step method.
Anne Marie Treguier, Clement de Boyer Montégut, Alexandra Bozec, Eric P. Chassignet, Baylor Fox-Kemper, Andy McC. Hogg, Doroteaciro Iovino, Andrew E. Kiss, Julien Le Sommer, Yiwen Li, Pengfei Lin, Camille Lique, Hailong Liu, Guillaume Serazin, Dmitry Sidorenko, Qiang Wang, Xiaobio Xu, and Steve Yeager
Geosci. Model Dev., 16, 3849–3872, https://doi.org/10.5194/gmd-16-3849-2023, https://doi.org/10.5194/gmd-16-3849-2023, 2023
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The ocean mixed layer is the interface between the ocean interior and the atmosphere and plays a key role in climate variability. We evaluate the performance of the new generation of ocean models for climate studies, designed to resolve
ocean eddies, which are the largest source of ocean variability and modulate the mixed-layer properties. We find that the mixed-layer depth is better represented in eddy-rich models but, unfortunately, not uniformly across the globe and not in all models.
Duseong S. Jo, Simone Tilmes, Louisa K. Emmons, Siyuan Wang, and Francis Vitt
Geosci. Model Dev., 16, 3893–3906, https://doi.org/10.5194/gmd-16-3893-2023, https://doi.org/10.5194/gmd-16-3893-2023, 2023
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A new simple secondary organic aerosol (SOA) scheme has been developed for the Community Atmosphere Model (CAM) based on the complex SOA scheme in CAM with detailed chemistry (CAM-chem). The CAM with the new SOA scheme shows better agreements with CAM-chem in terms of aerosol concentrations and radiative fluxes, which ensures more consistent results between different compsets in the Community Earth System Model. The new SOA scheme also has technical advantages for future developments.
Leroy J. Bird, Matthew G. W. Walker, Greg E. Bodeker, Isaac H. Campbell, Guangzhong Liu, Swapna Josmi Sam, Jared Lewis, and Suzanne M. Rosier
Geosci. Model Dev., 16, 3785–3808, https://doi.org/10.5194/gmd-16-3785-2023, https://doi.org/10.5194/gmd-16-3785-2023, 2023
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Deriving the statistics of expected future changes in extreme precipitation is challenging due to these events being rare. Regional climate models (RCMs) are computationally prohibitive for generating ensembles capable of capturing large numbers of extreme precipitation events with statistical robustness. Stochastic precipitation generators (SPGs) provide an alternative to RCMs. We describe a novel single-site SPG that learns the statistics of precipitation using a machine-learning approach.
Zhe Zhang, Yanping Li, Fei Chen, Phillip Harder, Warren Helgason, James Famiglietti, Prasanth Valayamkunnath, Cenlin He, and Zhenhua Li
Geosci. Model Dev., 16, 3809–3825, https://doi.org/10.5194/gmd-16-3809-2023, https://doi.org/10.5194/gmd-16-3809-2023, 2023
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Crop models incorporated in Earth system models are essential to accurately simulate crop growth processes on Earth's surface and agricultural production. In this study, we aim to model the spring wheat in the Northern Great Plains, focusing on three aspects: (1) develop the wheat model at a point scale, (2) apply dynamic planting and harvest schedules, and (3) adopt a revised heat stress function. The results show substantial improvements and have great importance for agricultural production.
Abolfazl Simorgh, Manuel Soler, Daniel González-Arribas, Florian Linke, Benjamin Lührs, Maximilian M. Meuser, Simone Dietmüller, Sigrun Matthes, Hiroshi Yamashita, Feijia Yin, Federica Castino, Volker Grewe, and Sabine Baumann
Geosci. Model Dev., 16, 3723–3748, https://doi.org/10.5194/gmd-16-3723-2023, https://doi.org/10.5194/gmd-16-3723-2023, 2023
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This paper addresses the robust climate optimal trajectory planning problem under uncertain meteorological conditions within the structured airspace. Based on the optimization methodology, a Python library has been developed, which can be accessed using the following DOI: https://doi.org/10.5281/zenodo.7121862. The developed tool is capable of providing robust trajectories taking into account all probable realizations of meteorological conditions provided by an EPS computationally very fast.
Matteo Willeit, Tatiana Ilyina, Bo Liu, Christoph Heinze, Mahé Perrette, Malte Heinemann, Daniela Dalmonech, Victor Brovkin, Guy Munhoven, Janine Börker, Jens Hartmann, Gibran Romero-Mujalli, and Andrey Ganopolski
Geosci. Model Dev., 16, 3501–3534, https://doi.org/10.5194/gmd-16-3501-2023, https://doi.org/10.5194/gmd-16-3501-2023, 2023
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In this paper we present the carbon cycle component of the newly developed fast Earth system model CLIMBER-X. The model can be run with interactive atmospheric CO2 to investigate the feedbacks between climate and the carbon cycle on temporal scales ranging from decades to > 100 000 years. CLIMBER-X is expected to be a useful tool for studying past climate–carbon cycle changes and for the investigation of the long-term future evolution of the Earth system.
Jatan Buch, A. Park Williams, Caroline S. Juang, Winslow D. Hansen, and Pierre Gentine
Geosci. Model Dev., 16, 3407–3433, https://doi.org/10.5194/gmd-16-3407-2023, https://doi.org/10.5194/gmd-16-3407-2023, 2023
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We leverage machine learning techniques to construct a statistical model of grid-scale fire frequencies and sizes using climate, vegetation, and human predictors. Our model reproduces the observed trends in fire activity across multiple regions and timescales. We provide uncertainty estimates to inform resource allocation plans for fuel treatment and fire management. Altogether the accuracy and efficiency of our model make it ideal for coupled use with large-scale dynamical vegetation models.
Sebastian Ostberg, Christoph Müller, Jens Heinke, and Sibyll Schaphoff
Geosci. Model Dev., 16, 3375–3406, https://doi.org/10.5194/gmd-16-3375-2023, https://doi.org/10.5194/gmd-16-3375-2023, 2023
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We present a new toolbox for generating input datasets for terrestrial ecosystem models from diverse and partially conflicting data sources. The toolbox documents the sources and processing of data and is designed to make inconsistencies between source datasets transparent so that users can make their own decisions on how to resolve these should they not be content with our default assumptions. As an example, we use the toolbox to create input datasets at two different spatial resolutions.
Alena Malyarenko, Alexandra Gossart, Rui Sun, and Mario Krapp
Geosci. Model Dev., 16, 3355–3373, https://doi.org/10.5194/gmd-16-3355-2023, https://doi.org/10.5194/gmd-16-3355-2023, 2023
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Simultaneous modelling of ocean, sea ice, and atmosphere in coupled models is critical for understanding all of the processes that happen in the Antarctic. Here we have developed a coupled model for the Ross Sea, P-SKRIPS, that conserves heat and mass between the ocean and sea ice model (MITgcm) and the atmosphere model (PWRF). We have shown that our developments reduce the model drift, which is important for long-term simulations. P-SKRIPS shows good results in modelling coastal polynyas.
Feijia Yin, Volker Grewe, Federica Castino, Pratik Rao, Sigrun Matthes, Katrin Dahlmann, Simone Dietmüller, Christine Frömming, Hiroshi Yamashita, Patrick Peter, Emma Klingaman, Keith P. Shine, Benjamin Lührs, and Florian Linke
Geosci. Model Dev., 16, 3313–3334, https://doi.org/10.5194/gmd-16-3313-2023, https://doi.org/10.5194/gmd-16-3313-2023, 2023
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This paper describes a newly developed submodel ACCF V1.0 based on the MESSy 2.53.0 infrastructure. The ACCF V1.0 is based on the prototype algorithmic climate change functions (aCCFs) v1.0 to enable climate-optimized flight trajectories. One highlight of this paper is that we describe a consistent full set of aCCFs formulas with respect to fuel scenario and metrics. We demonstrate the usage of the ACCF submodel using AirTraf V2.0 to optimize trajectories for cost and climate impact.
Peter Ukkonen and Robin J. Hogan
Geosci. Model Dev., 16, 3241–3261, https://doi.org/10.5194/gmd-16-3241-2023, https://doi.org/10.5194/gmd-16-3241-2023, 2023
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Climate and weather models suffer from uncertainties resulting from approximated processes. Solar and thermal radiation is one example, as it is computationally too costly to simulate precisely. This has led to attempts to replace radiation codes based on physical equations with neural networks (NNs) that are faster but uncertain. In this paper we use global weather simulations to demonstrate that a middle-ground approach of using NNs only to predict optical properties is accurate and reliable.
Maximilian Gelbrecht, Alistair White, Sebastian Bathiany, and Niklas Boers
Geosci. Model Dev., 16, 3123–3135, https://doi.org/10.5194/gmd-16-3123-2023, https://doi.org/10.5194/gmd-16-3123-2023, 2023
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Differential programming is a technique that enables the automatic computation of derivatives of the output of models with respect to model parameters. Applying these techniques to Earth system modeling leverages the increasing availability of high-quality data to improve the models themselves. This can be done by either using calibration techniques that use gradient-based optimization or incorporating machine learning methods that can learn previously unresolved influences directly from data.
Carolina Gallo, Jonathan M. Eden, Bastien Dieppois, Igor Drobyshev, Peter Z. Fulé, Jesús San-Miguel-Ayanz, and Matthew Blackett
Geosci. Model Dev., 16, 3103–3122, https://doi.org/10.5194/gmd-16-3103-2023, https://doi.org/10.5194/gmd-16-3103-2023, 2023
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This study conducts the first global evaluation of the latest generation of global climate models to simulate a set of fire weather indicators from the Canadian Fire Weather Index System. Models are shown to perform relatively strongly at the global scale, but they show substantial regional and seasonal differences. The results demonstrate the value of model evaluation and selection in producing reliable fire danger projections, ultimately to support decision-making and forest management.
Klaus Klingmüller and Jos Lelieveld
Geosci. Model Dev., 16, 3013–3028, https://doi.org/10.5194/gmd-16-3013-2023, https://doi.org/10.5194/gmd-16-3013-2023, 2023
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Desert dust has significant impacts on climate, public health, infrastructure and ecosystems. An impact assessment requires numerical predictions, which are challenging because the dust emissions are not well known. We present a novel approach using satellite observations and machine learning to more accurately estimate the emissions and to improve the model simulations.
Anna Denvil-Sommer, Erik T. Buitenhuis, Rainer Kiko, Fabien Lombard, Lionel Guidi, and Corinne Le Quéré
Geosci. Model Dev., 16, 2995–3012, https://doi.org/10.5194/gmd-16-2995-2023, https://doi.org/10.5194/gmd-16-2995-2023, 2023
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Using outputs of global biogeochemical ocean model and machine learning methods, we demonstrate that it will be possible to identify linkages between surface environmental and ecosystem structure and the export of carbon to depth by sinking organic particles using real observations. It will be possible to use this knowledge to improve both our understanding of ecosystem dynamics and of their functional representation within models.
Zhenxia Liu, Zengjie Wang, Jian Wang, Zhengfang Zhang, Dongshuang Li, Zhaoyuan Yu, Linwang Yuan, and Wen Luo
Geosci. Model Dev., 16, 2939–2955, https://doi.org/10.5194/gmd-16-2939-2023, https://doi.org/10.5194/gmd-16-2939-2023, 2023
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This study introduces an improved method of the Globally Resolved Energy Balance (GREB) model by the Bayesian network. The improved method constructs a coarse–fine structure that combines a dynamical model with a statistical model based on employing the GREB model as the global framework and utilizing Bayesian networks as the local optimization. The results show that the improved model has better applicability and stability on a global scale and maintains good robustness on the timescale.
Colin Tully, David Neubauer, and Ulrike Lohmann
Geosci. Model Dev., 16, 2957–2973, https://doi.org/10.5194/gmd-16-2957-2023, https://doi.org/10.5194/gmd-16-2957-2023, 2023
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A new method to simulate deterministic ice nucleation processes based on the differential activated fraction was evaluated against a cumulative approach. Box model simulations of heterogeneous-only ice nucleation within cirrus suggest that the latter approach likely underpredicts the ice crystal number concentration. Longer simulations with a GCM show that choosing between these two approaches impacts ice nucleation competition within cirrus but leads to small and insignificant climate effects.
Rasmus E. Benestad, Abdelkader Mezghani, Julia Lutz, Andreas Dobler, Kajsa M. Parding, and Oskar A. Landgren
Geosci. Model Dev., 16, 2899–2913, https://doi.org/10.5194/gmd-16-2899-2023, https://doi.org/10.5194/gmd-16-2899-2023, 2023
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A mathematical method known as common EOFs is not widely used within the climate research community, but it offers innovative ways of evaluating climate models. We show how common EOFs can be used to evaluate large ensembles of global climate model simulations and distill information about their ability to reproduce salient features of the regional climate. We can say that they represent a kind of machine learning (ML) for dealing with big data.
Li Liu, Chao Sun, Xinzhu Yu, Hao Yu, Qingu Jiang, Xingliang Li, Ruizhe Li, Bin Wang, Xueshun Shen, and Guangwen Yang
Geosci. Model Dev., 16, 2833–2850, https://doi.org/10.5194/gmd-16-2833-2023, https://doi.org/10.5194/gmd-16-2833-2023, 2023
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C-Coupler3.0 is an integrated coupler infrastructure with new features, i.e. a series of parallel-optimization technologies, a common halo-exchange library, a common module-integration framework, a common framework for conveniently developing a weakly coupled ensemble data assimilation system, and a common framework for flexibly inputting and outputting fields in parallel. It is able to handle coupling under much finer resolutions (e.g. more than 100 million horizontal grid cells).
Joseph Schoonover, Wilbert Weijer, and Jiaxu Zhang
Geosci. Model Dev., 16, 2795–2809, https://doi.org/10.5194/gmd-16-2795-2023, https://doi.org/10.5194/gmd-16-2795-2023, 2023
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FEOTS aims to enhance the value of data produced by state-of-the-art climate models by providing a framework to diagnose and use ocean transport operators for offline passive tracer simulations. We show that we can capture ocean transport operators from a validated climate model and employ these operators to estimate water mass budgets in an offline regional simulation, using a small fraction of the compute resources required to run a full climate simulation.
Johann Dahm, Eddie Davis, Florian Deconinck, Oliver Elbert, Rhea George, Jeremy McGibbon, Tobias Wicky, Elynn Wu, Christopher Kung, Tal Ben-Nun, Lucas Harris, Linus Groner, and Oliver Fuhrer
Geosci. Model Dev., 16, 2719–2736, https://doi.org/10.5194/gmd-16-2719-2023, https://doi.org/10.5194/gmd-16-2719-2023, 2023
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It is hard for scientists to write code which is efficient on different kinds of supercomputers. Python is popular for its user-friendliness. We converted a Fortran code, simulating Earth's atmosphere, into Python. This new code auto-converts to a faster language for processors or graphic cards. Our code runs 3.5–4 times faster on graphic cards than the original on processors in a specific supercomputer system.
Cited articles
Baldocchi, D. and Meyers, T.: On using eco-physiological, micrometeorological and biogeochemical theory to evaluate carbon dioxide, water vapor and trace gas fluxes over vegetation: a perspective, Agr. Forest Meteorol., 90, 1–25, 1998.
Baldocchi, D. D. and Wilson, K. B.: Modeling CO2 and water vapor exchange of a temperate broadleaved forest across hourly to decadal time scales, Ecol. Model., 142, 155–184, 2001.
Baldocchi, D. D., Wilson, K. B., and Gu, L.: How the environment, canopy structure and canopy physiological functioning influence carbon, water and energy fluxes of a temperate broad-leaved deciduous forest – an assessment with the biophysical model CANOAK, Tree Physiol., 22, 1065–1077, 2002.
Ball, J. T., Woodrow, I. E., and Berry, J. A.: A model predicting stomatal conductance and its contribution to the control of photosynthesis under different environmental conditions, in: Progress in Photosynthesis Research, Vol. 4, edited by: Biggins, J., Martinus Nijhoff, the Netherlands, 221–224, 1987.
Bonan, G. B.: Land–atmosphere CO2 exchange simulated by a land surface process model coupled to an atmospheric general circulation model, J. Geophys. Res., 100D, 2817–2831, 1995.
Bonan, G. B., Lawrence, P. J., Oleson, K. W., Levis, S., Jung, M., Reichstein, M., Lawrence, D. M., and Swenson, S. C.: Improving canopy processes in the Community Land Model version 4 (CLM4) using global flux fields empirically inferred from FLUXNET data, J. Geophys. Res., 116, G02014, https://doi.org/10.1029/2010JG001593, 2011.
Bonan, G. B., Oleson, K. W., Fisher, R. A., Lasslop, G., and Reichstein, M.: Reconciling leaf physiological traits and canopy flux data: use of the TRY and FLUXNET databases in the Community Land Model version 4, J. Geophys. Res., 117, G02026, https://doi.org/10.1029/2011JG001913, 2012.
Choat, B., Jansen, S., Brodribb, T. J., Cochard, H., Delzon, S., Bhaskar, R., Bucci, S. J., Field, T. S., Gleason, S. M., Hacke, U. G., Jacobsen, A. L., Lens, F., Maherali, H., Martínez-Vilalta, J., Mayr, S., Mencuccini, M., Mitchell, P. J., Nardini, A., Pittermann, J., Pratt, R. B., Sperry, J. S., Westoby, M., Wright, I. J., and Zanne, A. E.: Global convergence in the vulnerability of forests to drought, Nature, 491, 752–755, 2012.
Collatz, G. J., Ball, J. T., Grivet, C., and Berry, J. A.: Physiological and environmental regulation of stomatal conductance, photosynthesis and transpiration: a model that includes a laminar boundary layer, Agr. Forest Meteorol., 54, 107–136, 1991.
Cowan, I. R.: Stomatal behavior and environment, Adv. Bot. Res., 4, 117–228, 1977.
Cowan, I. R. and Farquhar, G. D.: Stomatal function in relation to leaf metabolism and environment, in: Integration of Activity in the Higher Plant, edited by: Jennings, D. H., Cambridge University Press, Cambridge, 471–505, 1977.
Cox, P. M., Huntingford, C., and Harding, R. J.: A canopy conductance and photosynthesis model for use in a GCM land surface scheme, J. Hydrol., 212–213, 79–94, 1998.
De Kauwe, M. G., Medlyn, B. E., Zaehle, S., Walker, A. P., Dietze, M. C., Hickler, T., Jain, A. K., Luo, Y., Parton, W. J., Prentice, I. C., Smith, B., Thornton, P. E., Wang, S., Wang, Y.-P., Warlind, D., Weng, E., Crous, K. Y., Ellsworth, D. S., Hanson, P. J., Kim, H.-S., Warren, J. M., Oren, R., and Norby, R. J.: Forest water use and water use efficiency at elevated CO2: a model–data intercomparison at two contrasting temperate forest FACE sites, Global Change Biol., 19, 1759–1779, 2013.
Duursma, R. A. and Medlyn, B. E.: MAESPA: a model to study interactions between water limitation, environmental drivers and vegetation function at tree and stand levels, with an example application to [CO2] × drought interactions, Geosci. Model Dev., 5, 919–940, https://doi.org/10.5194/gmd-5-919-2012, 2012.
Egea, G., Verhoef, A., and Vidale, P. L.: Towards an improved and more flexible representation of water stress in coupled photosynthesis–stomatal conductance models, Agr. Forest Meteorol., 151, 1370–1384, 2011.
Ewers, B. E., Oren, R., and Sperry, J. S.: Influence of nutrient versus water supply on hydraulic architecture and water balance in Pinus taeda, Plant Cell Environ., 23, 1055–1066, 2000.
Ewers, B. E., Gower, S. T., Bond-Lamberty, B., and Wang, C. K.: Effects of stand age and tree species on canopy transpiration and average stomatal conductance of boreal forests, Plant Cell Environ., 28, 660–678, 2005.
Farquhar, G. D., von Caemmerer, S., and Berry, J. A.: A biochemical model of photosynthetic CO2 assimilation in leaves of C3 species, Planta, 149, 78–90, 1980.
Federer, C. A., Vörösmarty, C., and Fekete, B.: Sensitivity of annual evaporation to soil and root properties in two models of contrasting complexity, J. Hydrometeorol., 4, 1276–1290, 2003.
Fisher, R. A., Williams, M., Lobo do Vale, R., Lola da Costa, A., and Meir, P.: Evidence from Amazonian forests is consistent with isohydric control of leaf water potential, Plant Cell Environ., 29, 151–165, 2006.
Fisher, R. A., Williams, M., Lola da Costa, A., Malhi, Y., da Costa, R. F., Almeida, S., and Meir, P.: The response of an Eastern Amazonian rain forest to drought stress: results and modelling analyses from a throughfall exclusion experiment, Global Change Biol., 13, 2361–2378, 2007.
Foken, T.: The energy balance closure problem: an overview, Ecol. Appl., 18, 1351–1367, 2008.
Friend, A. D.: PGEN: an integrated model of leaf photosynthesis, transpiration, and conductance, Ecol. Model., 77, 233–255, 1995.
Gardner, W. R.: Dynamic aspects of water availability to plants, Soil Sci., 89, 63–73, 1960.
Goldstein, G., Andrade, J. L., Meinzer, F. C., Holbrook, N. M., Cavelier, J., Jackson, P., and Celis, A.: Stem water storage and diurnal patterns of water use in tropical forest canopy trees, Plant Cell Environ., 21, 397–406, 1998.
Hendricks Franssen, H. J., Stöckli, R., Lehner, I., Rotenberg, E., and Seneviratne, S. I.: Energy balance closure of eddy-covariance data: a multisite analysis for European FLUXNET stations, Agr. Forest Meteorol., 150, 1553–1567, 2010.
Hetherington, A. M. and Woodward, F. I.: The role of stomata in sensing and driving environmental change, Nature, 424, 901–908, 2003.
Hill, T. C., Williams, M., Woodward, F. I., and Moncrieff, J. B.: Constraining ecosystem processes from tower fluxes and atmospheric profiles, Ecol. Appl., 21, 1474–1489, 2011.
Hollinger, D. Y., Goltz, S. M., Davidson, E. A., Lee, J. T., Tu, K., and Valentine, H. T.: Seasonal patterns and environmental control of carbon dioxide and water vapour exchange in an ecotonal boreal forest, Global Change Biol., 5, 891–902, 1999.
Jackson, R. B., Mooney, H. A., and Schulze, E.-D.: A global budget for fine root biomass, surface area, and nutrient contents, Proc. Natl. Acad. Sci. USA, 94, 7362–7366, 1997.
Kattge, J. and Knorr, W.: Temperature acclimation in a biochemical model of photosynthesis: a reanalysis of data from 36 species, Plant Cell Environ., 30, 1176–1190, 2007.
Kattge, J., Knorr, W., Raddatz, T., and Wirth, C.: Quantifying photosynthetic capacity and its relationship to leaf nitrogen content for global-scale terrestrial biosphere models, Global Change Biol., 15, 976–991, 2009.
Katul, G. G., Palmroth, S., and Oren, R.: Leaf stomatal responses to vapour pressure deficit under current and CO2-enriched atmosphere explained by the economics of gas exchange, Plant Cell Environ., 32, 968–979, 2009.
Katul, G., Manzoni, S., Palmroth, S. and Oren, R.: A stomatal optimization theory to describe the effects of atmospheric CO2 on leaf photosynthesis and transpiration, Ann. Bot., 105, 431–442, 2010.
Körner, C.: Leaf diffusive conductances in the major vegetation types of the globe, in: Ecophysiology of Photosynthesis, edited by: Schulze, E.-D. and Caldwell, M. M., Springer-Verlag, Berlin, 463–490, 1994.
Koven, C. D., Riley, W. J., Subin, Z. M., Tang, J. Y., Torn, M. S., Collins, W. D., Bonan, G. B., Lawrence, D. M., and Swenson, S. C.: The effect of vertically resolved soil biogeochemistry and alternate soil C and N models on C dynamics of CLM4, Biogeosciences, 10, 7109–7131, https://doi.org/10.5194/bg-10-7109-2013, 2013.
Leuning, R.: A critical appraisal of a combined stomatal–photosynthesis model for C3 plants, Plant Cell Environ., 18, 339–355, 1995.
Leuning, R., van Gorsel, E., Massman, W. J., and Issac, P. R.: Reflections on the surface energy imbalance problem, Agr. Forest Meteorol., 156, 65–74, 2012.
Lloyd, J., Patiño, S., Paiva, R. Q., Nardoto, G. B., Quesada, C. A., Santos, A. J. B., Baker, T. R., Brand, W. A., Hilke, I., Gielmann, H., Raessler, M., Luizão, F. J., Martinelli, L. A., and Mercado, L. M.: Optimisation of photosynthetic carbon gain and within-canopy gradients of associated foliar traits for Amazon forest trees, Biogeosciences, 7, 1833–1859, https://doi.org/10.5194/bg-7-1833-2010, 2010.
Manzoni, S., Vico, G., Porporato, A., and Katul. G .: Biological constraints on water transport in the soil–plant–atmosphere system, Adv. Water Resour., 51, 292–304, 2013.
McDowell, N. G., Fisher, R. A., Xu, C., Domec, J. C., Hölttä, T., Mackay, D. S., Sperry, J. S., Boutz, A., Dickman, L., Gehres, N., Limousin, J. M., Macalady, A., Martínez-Vilalta, J., Mencuccini, M., Plaut, J. A., Ogée, J., Pangle, R. E., Rasse, D. P., Ryan, M. G., Sevanto, S., Waring, R. H., Williams, A. P., Yepez, E. A., and Pockman, W. T.: Evaluating theories of drought-induced vegetation mortality using a multimodel–experiment framework, New Phytol., 200, 304–321, 2013.
Medlyn, B. E., Duursma, R. A., and Zeppel, M. J. B.: Forest productivity under climate change: a checklist for evaluating model studies, WIREs Climate Change, 2, 332–355, 2011a.
Medlyn, B. E., Duursma, R. A., Eamus, D., Ellsworth, D. S., Prentice, I. C., Barton, C. V. M., Crous, K. Y., de Angelis, P., Freeman, M., and Wingate, L.: Reconciling the optimal and empirical approaches to modelling stomatal conductance, Global Change Biol., 17, 2134–2144, 2011b.
Meinzer, F. C.: Co-ordination of vapour and liquid phase water transport properties in plants, Plant Cell Environ., 25, 265–274, 2002.
Meinzer, F. C., Goldstein, G., Jackson, P., Holbrook, N. M., Gutiérrez, M. V., and Cavelier, J.: Environmental and physiological regulation of transpiration in tropical forest gap species: the influence of boundary layer and hydraulic properties, Oecologia, 101, 514–522, 1995.
Mencuccini, M.: The ecological significance of long-distance water transport: short-term regulation, long-term acclimation and the hydraulic costs of stature across plant life forms, Plant Cell Environ., 26, 163–182, 2003.
Newman, E. I.: Resistance to water flow in soil and plant. I. Soil resistance in relation to amounts of root: theoretical estimates, J. Appl. Ecol., 6, 1–12, 1969.
Norman, J. M.: Modeling the complete crop canopy, in: Modification of the Aerial Environment of Plants, edited by: Barfield, B. J. and Gerber, J. F., Am. Soc. of Agric. Eng., St. Joseph, Mich, 249–277, 1979.
Oleson, K. W., Lawrence, D. M., Bonan, G. B., Drewniak, B., Huang, M., Koven, C. D., Levis, S., Li, F., Riley, W. J., Subin, Z. M., Swenson, S. C., Thornton, P. E., Bozbiyik, A., Fisher, R., Heald, C. L., Kluzek, E., Lamarque, J.-F., Lawrence, P. J., Leung, L. R., Lipscomb, W., Muszala, S., Ricciuto, D. M., Sacks, W., Sun, Y., Tang, J., and Yang, Z.-L.: Technical description of version 4.5 of the Community Land Model (CLM), NCAR Tech. Note NCAR/TN-503+STR, National Center for Atmospheric Research, Boulder, Colorado, 420 pp., 2013.
Ollinger, S. V., Richardson, A. D., Martin, M. E., Hollinger, D. Y., Frolking, S. E., Reich, P. B., Plourde, L. C., Katul, G. G., Munger, J. W., Oren, R., Smith, M.-L., Paw U, K. T., Bolstad, P. V., Cook, B. D., Day, M. C., Martin, T. A., Monson, R. K., and Schmid, H. P.: Canopy nitrogen, carbon assimilation, and albedo in temperate and boreal forests: Functional relations and potential climate feedbacks, Proc. Natl. Acad. Sci. USA, 105, 19336–19341, 2008.
Oren, R., Sperry, J. S., Katul, G. G., Pataki, D. E., Ewers, B. E., Phillips, N., and Schäfer, K. V. R.: Survey and synthesis of intra- and interspecific variation in stomatal sensitivity to vapour pressure deficit, Plant Cell Environ., 22, 1515–1526, 1999.
Peltoniemi, M. S., Duursma, R. A., and Medlyn, B. E.: Co-optimal distribution of leaf nitrogen and hydraulic conductance in plant canopies, Tree Physiol., 32, 510–519, 2012.
Richardson, A. D., Hollinger, D. Y., Burba, G. G., Davis, K. J., Flanagan, L. B., Katul, G. G., Munger, J. W., Ricciuto, D. M., Stoy, P. C., Suyker, A. E., Verma, S. B., and Wofsy, S. C.: A multi-site analysis of random error in tower-based measurements of carbon and energy fluxes, Agr. Forest Meteorol., 136, 1–18, 2006.
Richardson, A. D., Aubinet, M., Barr, A. G., Hollinger, D. Y., Ibrom, A., Lasslop, G. and Reichstein, M.: Uncertainty quantification, in: Eddy Covariance: A Practical Guide to Measurement and Data Analysis, edited by: Aubinet, M., Vesala, T. and Papale, D., Springer, Dordrecht, 173–209, 2012.
Rieger, M. and Litvin, P.: Root system hydraulic conductivity in species with contrasting root anatomy, J. Exper. Bot., 50, 201–209, 1999.
Saliendra, N. Z., Sperry, J. S., and Comstock, J. P.: Influence of leaf water status on stomatal response to humidity, hydraulic conductance, and soil drought in Betula occidentalis, Planta, 196, 357–366, 1995.
Schaefer, K., Schwalm, C. R., Williams, C., Arain, M. A., Barr, A., Chen, J. M., Davis, K. J., Dimitrov, D., Hilton, T. W., Hollinger, D. Y., Humphreys, E., Poulter, B., Raczka, B. M., Richardson, A. D., Sahoo, A., Thornton, P., Vargas, R., Verbeeck, H., Anderson, R., Baker, I., Black, T. A., Bolstad, P., Chen, J., Curtis, P. S., Desai, A. R., Dietze, M., Dragoni, D., Gough, C., Grant, R. F., Gu, L., Jain, A., Kucharik, C., Law, B., Liu, S., Lokipitiya, E., Margolis, H. A., Matamala, R., McCaughey, J. H., Monson, R., Munger, J. W., Oechel, W., Peng, C., Price, D. T., Ricciuto, D., Riley, W. J., Roulet, N., Tian, H., Tonitto, C., Torn, M., Weng, E., and Zhou, X.: A model–data comparison of gross primary productivity: results from the North American Carbon Program site synthesis, J. Geophys. Res., 117, G03010, https://doi.org/10.1029/2012JG001960, 2012.
Schmid, H. P., Grimmond, C. S. B., Cropley, F., Offerle, B., and Su, H.-B.: Measurements of CO2 and energy fluxes over a mixed hardwood forest in the mid-western United States, Agr. Forest Meteorol., 103, 357–374, 2000.
Schmid, H. P., Su, H.-B., Vogel, C. S., and Curtis, P. S.: Ecosystem–atmosphere exchange of carbon dioxide over a mixed hardwood forest in northern lower Michigan, J. Geophys. Res., 108, 4417, https://doi.org/10.1029/2002JD003011, 2003.
Schwalm, C. R., Williams, C. A., Schaefer, K., Anderson, R., Arain, M. A., Baker, I., Barr, A., Black, T. A., Chen,G., Chen, J. M., Ciais, P., Davis, K. J., Desai, A., Dietze, M., Dragoni, D., Fischer, M. L., Flanagan, L. B., Grant, R., Gu, L., Hollinger, D., Izaurralde, R. C., Kucharik, C., Lafleur, P., Law, B. E., Li, L., Li, Z., Liu, S., Lokupitiya, E., Luo, Y., Ma, S., Margolis, H., Matamala, R., McCaughey, H., Monson, R. K., Oechel, W. C., Peng, C., Poulter, B., Price, D. T., Riciutto, D. M., Riley, W., Sahoo, A. K., Sprintsin, M., Sun, J., Tian, H., Tonitto, C., Verbeeck, H., and Verma, S. B.: A model-data intercomparison of CO2 exchange across North America: results from the North American Carbon Program site synthesis, J. Geophys. Res., 115, G00H05, https://doi.org/10.1029/2009JG001229, 2010.
Schwarz, P. A., Law, B. E., Williams, M., Irvine, J., Kurpius, M., and Moore, D.: Climatic versus biotic constraints on carbon and water fluxes in seasonally drought-affected ponderosa pine ecosystems, Global Biogeochem. Cy., 18, GB4007, https://doi.org/10.1029/2004GB002234, 2004.
Sellers, P. J., Randall, D. A., Collatz, G. J., Berry, J. A., Field, C. B., Dazlich, D. A., Zhang, C., Collelo, G. D., and Bounoua, L.: A revised land surface parameterization (SiB2) for atmospheric GCMs, Part I: Model formulation, J. Climate, 9, 676–705, 1996.
Shimizu, M., Ishida, A., and Hogetsu, T.: Root hydraulic conductivity and whole-plant water balance in tropical saplings following a shade-to-sun transfer, Oecologia, 143, 189–197, 2005.
Siqueira, M. B., Katul, G. G., Sampson, D. A., Stoy, P. C., Juang, J.-Y., McCarthy, H. R., and Oren, R: Multiscale model intercomparisons of CO2 and H2O exchange rates in a maturing southeastern US pine forest, Global Change Biol., 12, 1189–1207, 2006.
Sperry, J. S., Adler, F. R., Campbell, G. S., and Comstock, J. P.: Limitation of plant water use by rhizosphere and xylem conductance: results from a model, Plant Cell Environ., 21, 347–359, 1998.
Sperry, J. S., Hacke, U. G., Oren, R., and Comstock, J. P.: Water deficits and hydraulic limits to leaf water supply, Plant Cell Environ., 25, 251–263, 2002.
Stöckli, R., Lawrence, D. M., Niu, G.-Y., Oleson, K. W., Thornton, P. E., Yang, Z.-L., Bonan, G. B., Denning, A. S., and Running, S. W.: Use of FLUXNET in the Community Land Model development, J. Geophys. Res., 113, G01025, https://doi.org/10.1029/2007JG000562, 2008.
Stoy, P. C., Katul, G. G., Siqueira, M. B. S., Juang, J.-Y., Novick, K. A., McCarthy, H. R., Oishi, A. C., Uebelherr, J. M., Kim, H.-S., and Oren, R.: Separating the effects of climate and vegetation on evapotranspiration along a successional chronosequence in the southeastern US, Global Change Biol., 12, 2115–2135, 2006.
Stoy, P. C., Mauder, M., Foken, T., Marcolla, B., Boegh, E., Ibrom, A., Arain, M. A., Arneth, A., Aurela, M., Bernhofer, C., Cescatti, A., Dellwik, E., Duce, P., Gianelle, D., van Gorsel, E., Kiely, G., Knohl, A., Margolis, H., McCaughey, H., Merbold, L., Montagnani, L., Papale, D., Reichstein, R., Saunders, M., Serrano-Ortiz, P., Sottocornola, M., Spano, D., Vaccari, F., and Varlagin, A.: A data-driven analysis of energy balance closure across FLUXNET research sites: the role of landscape scale heterogeneity, Agr. Forest Meteorol., 171/172, 137–152, 2013.
Taylor, K. E.: Summarizing multiple aspects of model performance in a single diagram, J. Geophys. Res., 106D, 7183–7192, 2001.
Tuzet, A., Perrier, A., and Leuning, R.: A coupled model of stomatal conductance, photosynthesis and transpiration, Plant Cell Environ., 26, 1097–1116, 2003.
Thomas, C. K., Law, B. E., Irvine, J., Martin, J. G., Pettijohn, J. C., and Davis, K. J.: Seasonal hydrology explains interannual and seasonal variation in carbon and water exchange in a semiarid mature ponderosa pine forest in central Oregon, J. Geophys. Res., 114, G04006, https://doi.org/10.1029/2009JG001010, 2009.
Tyree, M. T., Cochard, H., Cruiziat, P., Sinclair, B., and Ameglio, T.: Drought-induced leaf shedding in walnut: evidence for vulnerability segmentation, Plant Cell Environ., 16, 879–882, 1993.
Tyree, M. T., Yang, S., Cruiziat, P., and Sinclair, B.: Novel methods of measuring hydraulic conductivity of tree root systems and interpretation using AMAIZED: a maize-root dynamic model for water and solute transport, Plant Physiol., 104, 189–199, 1994.
Tyree, M. T., Velez, V., and Dalling, J. W.: Growth dynamics of root and shoot hydraulic conductance in seedlings of five neotropical tree species: scaling to show possible adaptation to differing light regimes, Oecologia, 114, 293–298, 1998.
Urbanski, S., Barford, C., Wofsy, S., Kucharik, C., Pyle, E., Budney, J., McKain, K., Fitzjarrald, D., Czikowsky, M., and Munger, J. W.: Factors controlling CO2 exchange on timescales from hourly to decadal at Harvard Forest, J. Geophys. Res., 112, G02020, https://doi.org/10.1029/2006JG000293, 2007.
Verhoef, A. and Egea, G.: Modeling plant transpiration under limited soil water: Comparison of different plant and soil hydraulic parameterizations and preliminary implications for their use in land surface models, Agr. Forest Meteorol., 191, 22–32, 2014.
Vico, G., Manzoni, S., Palmroth, S., Weih, M., and Katul, G.: A perspective on optimal leaf stomatal conductance under CO2 and light co-limitations, Agr. Forest Meteorol., 182/183, 191–199, 2013.
Williams, M., Rastetter, E. B., Fernandes, D. N., Goulden, M. L., Wofsy, S. C., Shaver, G. R., Melillo, J. M., Munger, J. W., Fan, S.-M., and Nadelhoffer, K. J.: Modelling the soil–plant–atmosphere continuum in a Quercus–Acer stand at Harvard Forest: the regulation of stomatal conductance by light, nitrogen and soil/plant hydraulic properties, Plant Cell Environ., 19, 911–927, 1996.
Williams, M., Malhi, Y., Nobre, A. D., Rastetter, E. B., Grace, J., and Pereira, M. G. P.: Seasonal variation in net carbon exchange and evapotranspiration in a Brazilian rain forest: a modelling analysis, Plant Cell Environ., 21, 953–968, 1998.
Williams, M., Eugster, W., Rastetter, E. B., McFadden, J. P., and Chapin III, F. S.: The controls on net ecosystem productivity along an Arctic transect: a model comparison with flux measurements, Global Change Biol., 6, 116–126, 2000.
Williams, M., Law, B. E., Anthoni, P. M., and Unsworth, M. H.: Use of a simulation model and ecosystem flux data to examine carbon–water interactions in ponderosa pine, Tree Physiol., 21, 287–298, 2001a.
Williams, M., Bond, B. J., and Ryan, M. G.: Evaluating different soil and plant hydraulic constraints on tree function using a model and sap flow data from ponderosa pine, Plant Cell Environ., 24, 679–690, 2001b.
Wright, I. J., Reich, P. B., Westoby, M., Ackerly, D. D., Baruch, Z., Bongers, F., Cavender-Bares, J., Chapin, T., Cornelissen, J. H. C., Diemer, M., Flexas, J., Garnier, E., Groom, P. K., Gulias, J., Hikosaka, K., Lamont, B. B., Lee, T., Lee, W., Lusk, C., Midgley, J. J., Navas, M.-L., Niinemets, Ü., Oleksyn, J., Osada, N., Poorter, H., Poot, P., Prior, L., Pyankov, V. I., Roumet, C., Thomas, S. C., Tjoelker, M. G., Veneklaas, E. J., and Villar, R: The worldwide leaf economics spectrum, Nature, 428, 821–827, 2004.
Yang, S. and Tyree, M. T.: Hydraulic architecture of Acer saccharum and A. rubrum: comparison of branches to whole trees and the contribution of leaves to hydraulic resistance, J. Exper. Bot., 45, 179–186, 1994.
Zeppel, M., Macinnis-Ng, C., Palmer, A., Taylor, D., Whitley, R., Fuentes, S., Yunusa, I., Williams, M., and Eamus, D: An analysis of the sensitivity of sap flux to soil and plant variables assessed for an Australian woodland using a soil–plant–atmosphere model, Functional Plant Biol., 35, 509–520, 2008.
Zhou, S., Duursma, R. A., Medlyn, B. E., Kelly, J. W. G., and Prentice, I. C.: How should we model plant responses to drought? An analysis of stomatal and non-stomatal responses to water stress, Agr. Forest Meteorol., 182/183, 204–214, 2013.
