Articles | Volume 17, issue 7
https://doi.org/10.5194/gmd-17-2929-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-17-2929-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Modeling boreal forest soil dynamics with the microbially explicit soil model MIMICS+ (v1.0)
Elin Ristorp Aas
CORRESPONDING AUTHOR
Department of Geosciences, University of Oslo, Oslo, Norway
Centre for Biogeochemistry in the Anthropocene, Department of Geosciences, University of Oslo, Oslo, Norway
Heleen A. de Wit
Norwegian Institute for Water Research, Økernveien 94, 0579 Oslo, Norway
Centre for Biogeochemistry in the Anthropocene, Department of Geosciences, University of Oslo, Oslo, Norway
Terje K. Berntsen
CORRESPONDING AUTHOR
Department of Geosciences, University of Oslo, Oslo, Norway
Centre for Biogeochemistry in the Anthropocene, Department of Geosciences, University of Oslo, Oslo, Norway
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Elin Ristorp Aas, Inge Althuizen, Hui Tang, Sonya Geange, Eva Lieungh, Vigdis Vandvik, and Terje Koren Berntsen
Biogeosciences, 21, 3789–3817, https://doi.org/10.5194/bg-21-3789-2024, https://doi.org/10.5194/bg-21-3789-2024, 2024
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We used a soil model to replicate two litterbag decomposition experiments to examine the implications of climate, litter quality, and soil microclimate representation. We found that macroclimate was more important than litter quality for modeled mass loss. By comparing different representations of soil temperature and moisture we found that using observed data did not improve model results. We discuss causes for this and suggest possible improvements to both the model and experimental design.
Jacqueline K. Knutson, François Clayer, Peter Dörsch, Sebastian Westermann, and Heleen A. de Wit
Biogeosciences, 22, 3899–3914, https://doi.org/10.5194/bg-22-3899-2025, https://doi.org/10.5194/bg-22-3899-2025, 2025
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Thawing permafrost at Iškoras in northern Norway is transforming peat plateaus into thermokarst ponds and wetlands. These small ponds show striking oversaturation of dissolved greenhouse gases, such as carbon dioxide (CO2) and methane (CH4), partly owing to organic matter processing. Streams nearby emit CO2, driven by turbulence. As permafrost disappears, carbon dynamics will change, potentially increasing emissions of CH4. This study highlights the need to integrate these changes into climate models.
Ragnhild Bieltvedt Skeie, Magne Aldrin, Terje K. Berntsen, Marit Holden, Ragnar Bang Huseby, Gunnar Myhre, and Trude Storelvmo
Earth Syst. Dynam., 15, 1435–1458, https://doi.org/10.5194/esd-15-1435-2024, https://doi.org/10.5194/esd-15-1435-2024, 2024
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Climate sensitivity and aerosol forcing are central quantities in climate science that are uncertain and contribute to the spread in climate projections. To constrain them, we use observations of temperature and ocean heat content as well as prior knowledge of radiative forcings over the industrialized period. The estimates are sensitive to how aerosol cooling evolved over the latter part of the 20th century, and a strong aerosol forcing trend in the 1960s–1970s is not supported by our analysis.
Elin Ristorp Aas, Inge Althuizen, Hui Tang, Sonya Geange, Eva Lieungh, Vigdis Vandvik, and Terje Koren Berntsen
Biogeosciences, 21, 3789–3817, https://doi.org/10.5194/bg-21-3789-2024, https://doi.org/10.5194/bg-21-3789-2024, 2024
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We used a soil model to replicate two litterbag decomposition experiments to examine the implications of climate, litter quality, and soil microclimate representation. We found that macroclimate was more important than litter quality for modeled mass loss. By comparing different representations of soil temperature and moisture we found that using observed data did not improve model results. We discuss causes for this and suggest possible improvements to both the model and experimental design.
Norbert Pirk, Kristoffer Aalstad, Yeliz A. Yilmaz, Astrid Vatne, Andrea L. Popp, Peter Horvath, Anders Bryn, Ane Victoria Vollsnes, Sebastian Westermann, Terje Koren Berntsen, Frode Stordal, and Lena Merete Tallaksen
Biogeosciences, 20, 2031–2047, https://doi.org/10.5194/bg-20-2031-2023, https://doi.org/10.5194/bg-20-2031-2023, 2023
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We measured the land–atmosphere exchange of CO2 and water vapor in alpine Norway over 3 years. The extremely snow-rich conditions in 2020 reduced the total annual evapotranspiration to 50 % and reduced the growing-season carbon assimilation to turn the ecosystem from a moderate annual carbon sink to an even stronger source. Our analysis suggests that snow cover anomalies are driving the most consequential short-term responses in this ecosystem’s functioning.
Sara Marie Blichner, Moa Kristina Sporre, and Terje Koren Berntsen
Atmos. Chem. Phys., 21, 17243–17265, https://doi.org/10.5194/acp-21-17243-2021, https://doi.org/10.5194/acp-21-17243-2021, 2021
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In this study we quantify how a new way of modeling the formation of new particles in the atmosphere affects the estimated cooling from aerosol–cloud interactions since pre-industrial times. Our improved scheme merges two common approaches to aerosol modeling: a sectional scheme for treating early growth and the pre-existing modal scheme in NorESM. We find that the cooling from aerosol–cloud interactions since pre-industrial times is reduced by 10 % when the new scheme is used.
Stefanie Falk, Ane V. Vollsnes, Aud B. Eriksen, Lisa Emberson, Connie O'Neill, Frode Stordal, and Terje Koren Berntsen
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-260, https://doi.org/10.5194/bg-2021-260, 2021
Revised manuscript not accepted
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Subarctic vegetation is threatened by climate change and ozone. We assess essential climate variables in 2018/19. 2018 was warmer and brighter than usual in Spring with forest fires and elevated ozone in summer. Visible damage was observed on plant species in 2018. We find that generic parameterizations used in modeling ozone dose do not suffice. We propose a method to acclimate these parameterizations and find an ozone-induced biomass loss of 2.5 to 17.4 % (up to 6 % larger than default).
Stefanie Falk, Ane V. Vollsnes, Aud B. Eriksen, Frode Stordal, and Terje Koren Berntsen
Atmos. Chem. Phys., 21, 15647–15661, https://doi.org/10.5194/acp-21-15647-2021, https://doi.org/10.5194/acp-21-15647-2021, 2021
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We evaluate regional and global models for ozone modeling and damage risk mapping of vegetation over subarctic Europe. Our analysis suggests that low-resolution global models do not reproduce the observed ozone seasonal cycle at ground level, underestimating ozone by 30–50 %. High-resolution regional models capture the seasonal cycle well, still underestimating ozone by up to 20 %. Our proposed gap-filling method for site observations shows a 76 % accuracy compared to the regional model (80 %).
Sara M. Blichner, Moa K. Sporre, Risto Makkonen, and Terje K. Berntsen
Geosci. Model Dev., 14, 3335–3359, https://doi.org/10.5194/gmd-14-3335-2021, https://doi.org/10.5194/gmd-14-3335-2021, 2021
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Aerosol–cloud interactions are the largest contributor to climate forcing uncertainty. In this study we combine two common approaches to aerosol representation in global models: a sectional scheme, which is closer to first principals, for the smallest particles forming in the atmosphere and a log-modal scheme, which is faster, for the larger particles. With this approach, we improve the aerosol representation compared to observations, while only increasing the computational cost by 15 %.
Peter Horvath, Hui Tang, Rune Halvorsen, Frode Stordal, Lena Merete Tallaksen, Terje Koren Berntsen, and Anders Bryn
Biogeosciences, 18, 95–112, https://doi.org/10.5194/bg-18-95-2021, https://doi.org/10.5194/bg-18-95-2021, 2021
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We evaluated the performance of three methods for representing vegetation cover. Remote sensing provided the best match to a reference dataset, closely followed by distribution modelling (DM), whereas the dynamic global vegetation model (DGVM) in CLM4.5BGCDV deviated strongly from the reference. Sensitivity tests show that use of threshold values for predictors identified by DM may improve DGVM performance. The results highlight the potential of using DM in the development of DGVMs.
Marianne T. Lund, Borgar Aamaas, Camilla W. Stjern, Zbigniew Klimont, Terje K. Berntsen, and Bjørn H. Samset
Earth Syst. Dynam., 11, 977–993, https://doi.org/10.5194/esd-11-977-2020, https://doi.org/10.5194/esd-11-977-2020, 2020
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Achieving the Paris Agreement temperature goals requires both near-zero levels of long-lived greenhouse gases and deep cuts in emissions of short-lived climate forcers (SLCFs). Here we quantify the near- and long-term global temperature impacts of emissions of individual SLCFs and CO2 from 7 economic sectors in 13 regions in order to provide the detailed knowledge needed to design efficient mitigation strategies at the sectoral and regional levels.
Moa K. Sporre, Sara M. Blichner, Roland Schrödner, Inger H. H. Karset, Terje K. Berntsen, Twan van Noije, Tommi Bergman, Declan O'Donnell, and Risto Makkonen
Atmos. Chem. Phys., 20, 8953–8973, https://doi.org/10.5194/acp-20-8953-2020, https://doi.org/10.5194/acp-20-8953-2020, 2020
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We investigate how emissions and parameters in current
SOA parameterisations in three ESMs affect both the resulting SOA in the models and the impact this has on climate through the direct and indirect aerosol effects. The SOA changes induce very different responses in the models, especially in terms of the indirect aerosol effect. This introduces uncertainties in ESM estimates of SOA climate impact through feedbacks in a warming climate and through anthropogenic land use change.
Maria Sand, Terje K. Berntsen, Annica M. L. Ekman, Hans-Christen Hansson, and Anna Lewinschal
Atmos. Chem. Phys., 20, 3079–3089, https://doi.org/10.5194/acp-20-3079-2020, https://doi.org/10.5194/acp-20-3079-2020, 2020
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There has been a growing interest in reducing emissions of soot particles to slow global warming and improve air quality. However, estimating the effect of reduced emissions is complex, as soot particles absorb solar radiation and influence heating rates, clouds, and humidity and can influence climate far outside their emission region. Here we investigate the impact of soot emitted in four major emissions areas, using different emissions rates, to see whether location and magnitude matter.
Borgar Aamaas, Terje Koren Berntsen, and Bjørn Hallvard Samset
Atmos. Chem. Phys., 19, 15235–15245, https://doi.org/10.5194/acp-19-15235-2019, https://doi.org/10.5194/acp-19-15235-2019, 2019
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Cutting short-lived pollutants can help keep cool the climate – but only if we are clever. We investigate how regional temperatures may change in response to different packages of air quality measures. One package consists of mitigation measures that mainly target emissions that are known to result in a cooler climate, while in the other, emissions are cut as much as technically possible in response to air quality concerns. We estimate the different contributions from various sectors and region.
Moa K. Sporre, Sara M. Blichner, Inger H. H. Karset, Risto Makkonen, and Terje K. Berntsen
Atmos. Chem. Phys., 19, 4763–4782, https://doi.org/10.5194/acp-19-4763-2019, https://doi.org/10.5194/acp-19-4763-2019, 2019
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In this study, an Earth system model has been used to investigate climate feedbacks associated with increasing BVOC emissions due to higher CO2 concentrations and temperatures. Higher BVOC emissions associated with a changed climate are found to induce an important negative climate feedback through increased aerosol formation and resulting changes in cloud properties. This feedback is found to have the potential to offset about 13 % of the radiative forcing associated with a doubling of CO2.
Anna Lewinschal, Annica M. L. Ekman, Hans-Christen Hansson, Maria Sand, Terje K. Berntsen, and Joakim Langner
Atmos. Chem. Phys., 19, 2385–2403, https://doi.org/10.5194/acp-19-2385-2019, https://doi.org/10.5194/acp-19-2385-2019, 2019
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We use a global climate model to study how anthropogenic emissions of short-lived atmospheric particles in different parts of the world influence the global temperature distribution. We find that the global mean temperature change per unit emission is similar for all emission regions, and the largest temperature response is found in the Arctic no matter where the emissions occur. However, for European emissions, the temperature change per unit emission is found to depend on emission strength.
Kjetil S. Aas, Léo Martin, Jan Nitzbon, Moritz Langer, Julia Boike, Hanna Lee, Terje K. Berntsen, and Sebastian Westermann
The Cryosphere, 13, 591–609, https://doi.org/10.5194/tc-13-591-2019, https://doi.org/10.5194/tc-13-591-2019, 2019
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Many permafrost landscapes contain large amounts of excess ground ice, which gives rise to small-scale elevation differences. This results in lateral fluxes of snow, water, and heat, which we investigate and show how it can be accounted for in large-scale models. Using a novel model technique which can account for these differences, we are able to model both the current state of permafrost and how these landscapes change as permafrost thaws, in a way that could not previously be achieved.
Ragnhild Bieltvedt Skeie, Terje Berntsen, Magne Aldrin, Marit Holden, and Gunnar Myhre
Earth Syst. Dynam., 9, 879–894, https://doi.org/10.5194/esd-9-879-2018, https://doi.org/10.5194/esd-9-879-2018, 2018
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A key question in climate science is how the global mean surface temperature responds to changes in greenhouse gases. This dependency is quantified by the climate sensitivity, which is determined by the complex feedbacks in the climate system. In this study observations of past climate change are used to estimate this sensitivity. Our estimate is consistent with values for the equilibrium climate sensitivity estimated by complex climate models but sensitive to the use of uncertain input data.
Inger Helene Hafsahl Karset, Terje Koren Berntsen, Trude Storelvmo, Kari Alterskjær, Alf Grini, Dirk Olivié, Alf Kirkevåg, Øyvind Seland, Trond Iversen, and Michael Schulz
Atmos. Chem. Phys., 18, 7669–7690, https://doi.org/10.5194/acp-18-7669-2018, https://doi.org/10.5194/acp-18-7669-2018, 2018
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This study highlights the role of oxidants in modeling of the preindustrial-to-present-day aerosol indirect effects. We argue that the aerosol precursor gases should be exposed to oxidants of its era to get a more correct representation of secondary aerosol formation. Our global model simulations show that the total aerosol indirect effect changes from −1.32 to −1.07 W m−2 when the precursor gases in the preindustrial simulation are exposed to preindustrial instead of present-day oxidants.
Maria Sand, Bjørn H. Samset, Yves Balkanski, Susanne Bauer, Nicolas Bellouin, Terje K. Berntsen, Huisheng Bian, Mian Chin, Thomas Diehl, Richard Easter, Steven J. Ghan, Trond Iversen, Alf Kirkevåg, Jean-François Lamarque, Guangxing Lin, Xiaohong Liu, Gan Luo, Gunnar Myhre, Twan van Noije, Joyce E. Penner, Michael Schulz, Øyvind Seland, Ragnhild B. Skeie, Philip Stier, Toshihiko Takemura, Kostas Tsigaridis, Fangqun Yu, Kai Zhang, and Hua Zhang
Atmos. Chem. Phys., 17, 12197–12218, https://doi.org/10.5194/acp-17-12197-2017, https://doi.org/10.5194/acp-17-12197-2017, 2017
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The role of aerosols in the changing polar climate is not well understood and the aerosols are poorly constrained in the models. In this study we have compared output from 16 different aerosol models with available observations at both poles. We show that the model median is representative of the observations, but the model spread is large. The Arctic direct aerosol radiative effect over the industrial area is positive during spring due to black carbon and negative during summer due to sulfate.
Borgar Aamaas, Terje K. Berntsen, Jan S. Fuglestvedt, Keith P. Shine, and William J. Collins
Atmos. Chem. Phys., 17, 10795–10809, https://doi.org/10.5194/acp-17-10795-2017, https://doi.org/10.5194/acp-17-10795-2017, 2017
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The climate impacts for emissions of different pollutants can be made comparable with weighting factors. This article estimates these weights based on temperature change for short-lived pollutants, such as methane and black carbon. Emissions from different seasons and regions are compared, for instance Europe and East Asia. The responses are calculated for four regions, where we see that the responses can be much higher in the Arctic than globally in some cases.
Marianne T. Lund, Borgar Aamaas, Terje Berntsen, Lisa Bock, Ulrike Burkhardt, Jan S. Fuglestvedt, and Keith P. Shine
Earth Syst. Dynam., 8, 547–563, https://doi.org/10.5194/esd-8-547-2017, https://doi.org/10.5194/esd-8-547-2017, 2017
Marianne T. Lund, Terje K. Berntsen, and Bjørn H. Samset
Atmos. Chem. Phys., 17, 6003–6022, https://doi.org/10.5194/acp-17-6003-2017, https://doi.org/10.5194/acp-17-6003-2017, 2017
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This study investigates possibilities for improving the representation of black carbon (BC) distribution in a global atmospheric chemistry-transport model by exploring uncertainties in key processes controlling the removal of aerosols from the atmosphere. Our results provide an increased understanding of the processes contributing to uncertainties in the BC abundance and climate impact and underline the importance of more observations and experimental data further constrain models.
Borgar Aamaas, Terje K. Berntsen, Jan S. Fuglestvedt, and Glen P. Peters
Earth Syst. Dynam. Discuss., https://doi.org/10.5194/esd-2017-25, https://doi.org/10.5194/esd-2017-25, 2017
Manuscript not accepted for further review
Borgar Aamaas, Terje K. Berntsen, Jan S. Fuglestvedt, Keith P. Shine, and Nicolas Bellouin
Atmos. Chem. Phys., 16, 7451–7468, https://doi.org/10.5194/acp-16-7451-2016, https://doi.org/10.5194/acp-16-7451-2016, 2016
Kjetil S. Aas, Thorben Dunse, Emily Collier, Thomas V. Schuler, Terje K. Berntsen, Jack Kohler, and Bartłomiej Luks
The Cryosphere, 10, 1089–1104, https://doi.org/10.5194/tc-10-1089-2016, https://doi.org/10.5194/tc-10-1089-2016, 2016
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A high-resolution, coupled atmosphere--climatic mass balance (CMB) model is applied to Svalbard for the period 2003 to 2013. The mean CMB during this period is negative but displays large spatial and temporal variations. Comparison with observations on different scales shows a good overall model performance except for one particular glacier, where wind strongly affects the spatial patterns of CMB. The model also shows considerable sensitivity to model resolution, especially on local scales.
A. Stohl, B. Aamaas, M. Amann, L. H. Baker, N. Bellouin, T. K. Berntsen, O. Boucher, R. Cherian, W. Collins, N. Daskalakis, M. Dusinska, S. Eckhardt, J. S. Fuglestvedt, M. Harju, C. Heyes, Ø. Hodnebrog, J. Hao, U. Im, M. Kanakidou, Z. Klimont, K. Kupiainen, K. S. Law, M. T. Lund, R. Maas, C. R. MacIntosh, G. Myhre, S. Myriokefalitakis, D. Olivié, J. Quaas, B. Quennehen, J.-C. Raut, S. T. Rumbold, B. H. Samset, M. Schulz, Ø. Seland, K. P. Shine, R. B. Skeie, S. Wang, K. E. Yttri, and T. Zhu
Atmos. Chem. Phys., 15, 10529–10566, https://doi.org/10.5194/acp-15-10529-2015, https://doi.org/10.5194/acp-15-10529-2015, 2015
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This paper presents a summary of the findings of the ECLIPSE EU project. The project has investigated the climate and air quality impacts of short-lived climate pollutants (especially methane, ozone, aerosols) and has designed a global mitigation strategy that maximizes co-benefits between air quality and climate policy. Transient climate model simulations allowed quantifying the impacts on temperature (e.g., reduction in global warming by 0.22K for the decade 2041-2050) and precipitation.
S. Eckhardt, B. Quennehen, D. J. L. Olivié, T. K. Berntsen, R. Cherian, J. H. Christensen, W. Collins, S. Crepinsek, N. Daskalakis, M. Flanner, A. Herber, C. Heyes, Ø. Hodnebrog, L. Huang, M. Kanakidou, Z. Klimont, J. Langner, K. S. Law, M. T. Lund, R. Mahmood, A. Massling, S. Myriokefalitakis, I. E. Nielsen, J. K. Nøjgaard, J. Quaas, P. K. Quinn, J.-C. Raut, S. T. Rumbold, M. Schulz, S. Sharma, R. B. Skeie, H. Skov, T. Uttal, K. von Salzen, and A. Stohl
Atmos. Chem. Phys., 15, 9413–9433, https://doi.org/10.5194/acp-15-9413-2015, https://doi.org/10.5194/acp-15-9413-2015, 2015
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The concentrations of sulfate, black carbon and other aerosols in the Arctic are characterized by high values in late winter and spring (so-called Arctic Haze) and low values in summer. Models have long been struggling to capture this seasonality. In this study, we evaluate sulfate and BC concentrations from different updated models and emissions against a comprehensive pan-Arctic measurement data set. We find that the models improved but still struggle to get the maximum concentrations.
B. H. Samset, G. Myhre, A. Herber, Y. Kondo, S.-M. Li, N. Moteki, M. Koike, N. Oshima, J. P. Schwarz, Y. Balkanski, S. E. Bauer, N. Bellouin, T. K. Berntsen, H. Bian, M. Chin, T. Diehl, R. C. Easter, S. J. Ghan, T. Iversen, A. Kirkevåg, J.-F. Lamarque, G. Lin, X. Liu, J. E. Penner, M. Schulz, Ø. Seland, R. B. Skeie, P. Stier, T. Takemura, K. Tsigaridis, and K. Zhang
Atmos. Chem. Phys., 14, 12465–12477, https://doi.org/10.5194/acp-14-12465-2014, https://doi.org/10.5194/acp-14-12465-2014, 2014
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Far from black carbon (BC) emission sources, present climate models are unable to reproduce flight measurements. By comparing recent models with data, we find that the atmospheric lifetime of BC may be overestimated in models. By adjusting modeled BC concentrations to measurements in remote regions - over oceans and at high altitudes - we arrive at a reduced estimate for BC radiative forcing over the industrial era.
K. Tsigaridis, N. Daskalakis, M. Kanakidou, P. J. Adams, P. Artaxo, R. Bahadur, Y. Balkanski, S. E. Bauer, N. Bellouin, A. Benedetti, T. Bergman, T. K. Berntsen, J. P. Beukes, H. Bian, K. S. Carslaw, M. Chin, G. Curci, T. Diehl, R. C. Easter, S. J. Ghan, S. L. Gong, A. Hodzic, C. R. Hoyle, T. Iversen, S. Jathar, J. L. Jimenez, J. W. Kaiser, A. Kirkevåg, D. Koch, H. Kokkola, Y. H Lee, G. Lin, X. Liu, G. Luo, X. Ma, G. W. Mann, N. Mihalopoulos, J.-J. Morcrette, J.-F. Müller, G. Myhre, S. Myriokefalitakis, N. L. Ng, D. O'Donnell, J. E. Penner, L. Pozzoli, K. J. Pringle, L. M. Russell, M. Schulz, J. Sciare, Ø. Seland, D. T. Shindell, S. Sillman, R. B. Skeie, D. Spracklen, T. Stavrakou, S. D. Steenrod, T. Takemura, P. Tiitta, S. Tilmes, H. Tost, T. van Noije, P. G. van Zyl, K. von Salzen, F. Yu, Z. Wang, Z. Wang, R. A. Zaveri, H. Zhang, K. Zhang, Q. Zhang, and X. Zhang
Atmos. Chem. Phys., 14, 10845–10895, https://doi.org/10.5194/acp-14-10845-2014, https://doi.org/10.5194/acp-14-10845-2014, 2014
R. B. Skeie, T. Berntsen, M. Aldrin, M. Holden, and G. Myhre
Earth Syst. Dynam., 5, 139–175, https://doi.org/10.5194/esd-5-139-2014, https://doi.org/10.5194/esd-5-139-2014, 2014
C. Jiao, M. G. Flanner, Y. Balkanski, S. E. Bauer, N. Bellouin, T. K. Berntsen, H. Bian, K. S. Carslaw, M. Chin, N. De Luca, T. Diehl, S. J. Ghan, T. Iversen, A. Kirkevåg, D. Koch, X. Liu, G. W. Mann, J. E. Penner, G. Pitari, M. Schulz, Ø. Seland, R. B. Skeie, S. D. Steenrod, P. Stier, T. Takemura, K. Tsigaridis, T. van Noije, Y. Yun, and K. Zhang
Atmos. Chem. Phys., 14, 2399–2417, https://doi.org/10.5194/acp-14-2399-2014, https://doi.org/10.5194/acp-14-2399-2014, 2014
M. S. Eide, S. B. Dalsøren, Ø. Endresen, B. Samset, G. Myhre, J. Fuglestvedt, and T. Berntsen
Atmos. Chem. Phys., 13, 4183–4201, https://doi.org/10.5194/acp-13-4183-2013, https://doi.org/10.5194/acp-13-4183-2013, 2013
Y. H. Lee, J.-F. Lamarque, M. G. Flanner, C. Jiao, D. T. Shindell, T. Berntsen, M. M. Bisiaux, J. Cao, W. J. Collins, M. Curran, R. Edwards, G. Faluvegi, S. Ghan, L. W. Horowitz, J. R. McConnell, J. Ming, G. Myhre, T. Nagashima, V. Naik, S. T. Rumbold, R. B. Skeie, K. Sudo, T. Takemura, F. Thevenon, B. Xu, and J.-H. Yoon
Atmos. Chem. Phys., 13, 2607–2634, https://doi.org/10.5194/acp-13-2607-2013, https://doi.org/10.5194/acp-13-2607-2013, 2013
B. H. Samset, G. Myhre, M. Schulz, Y. Balkanski, S. Bauer, T. K. Berntsen, H. Bian, N. Bellouin, T. Diehl, R. C. Easter, S. J. Ghan, T. Iversen, S. Kinne, A. Kirkevåg, J.-F. Lamarque, G. Lin, X. Liu, J. E. Penner, Ø. Seland, R. B. Skeie, P. Stier, T. Takemura, K. Tsigaridis, and K. Zhang
Atmos. Chem. Phys., 13, 2423–2434, https://doi.org/10.5194/acp-13-2423-2013, https://doi.org/10.5194/acp-13-2423-2013, 2013
M. Sand, T. K. Berntsen, J. E. Kay, J. F. Lamarque, Ø. Seland, and A. Kirkevåg
Atmos. Chem. Phys., 13, 211–224, https://doi.org/10.5194/acp-13-211-2013, https://doi.org/10.5194/acp-13-211-2013, 2013
Ø. Hodnebrog, T. K. Berntsen, O. Dessens, M. Gauss, V. Grewe, I. S. A. Isaksen, B. Koffi, G. Myhre, D. Olivié, M. J. Prather, F. Stordal, S. Szopa, Q. Tang, P. van Velthoven, and J. E. Williams
Atmos. Chem. Phys., 12, 12211–12225, https://doi.org/10.5194/acp-12-12211-2012, https://doi.org/10.5194/acp-12-12211-2012, 2012
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Simulating the drought response of European tree species with the dynamic vegetation model LPJ-GUESS (v4.1, 97c552c5)
pyVPRM: a next-generation vegetation photosynthesis and respiration model for the post-MODIS era
Emulating grid-based forest carbon dynamics using machine learning: an LPJ-GUESS v4.1.1 application
ELM2.1-XGBfire1.0: improving wildfire prediction by integrating a machine learning fire model in a land surface model
Development and assessment of the physical–biogeochemical ocean regional model in the Northwest Pacific: NPRT v1.0 (ROMS v3.9–TOPAZ v2.0)
Estimation of above- and below-ground ecosystem parameters for DVM-DOS-TEM v0.7.0 using MADS v1.7.3
Alquimia v1.0: a generic interface to biogeochemical codes – a tool for interoperable development, prototyping and benchmarking for multiphysics simulators
Soil nitrous oxide emissions from global land ecosystems and their drivers within the LPJ-GUESS model (v4.1)
Parameterization toolbox for a physical–biogeochemical model compatible with FABM – a case study: the coupled 1D GOTM–ECOSMO E2E for the Sylt–Rømø Bight, North Sea
H2MV (v1.0): global physically constrained deep learning water cycle model with vegetation
NN-TOC v1: global prediction of total organic carbon in marine sediments using deep neural networks
China Wildfire Emission Dataset (ChinaWED v1) for the period 2012–2022
Process-based modeling of solar-induced chlorophyll fluorescence with VISIT-SIF version 1.0
Implementing a process-based representation of soil water movement in a second-generation dynamic vegetation model: application to dryland ecosystems (LPJ-GUESS-RE v1.0)
Including the phosphorus cycle into the LPJ-GUESS dynamic global vegetation model (v4.1, r10994) – global patterns and temporal trends of N and P primary production limitation
A comprehensive land-surface vegetation model for multi-stream data assimilation, D&B v1.0
Sources of uncertainty in the SPITFIRE global fire model: development of LPJmL-SPITFIRE1.9 and directions for future improvements
CROMES v1.0: A flexible CROp Model Emulator Suite for climate impact assessment
The unicellular NUM v.0.91: a trait-based plankton model evaluated in two contrasting biogeographic provinces
FESOM2.1-REcoM3-MEDUSA2: an ocean–sea ice–biogeochemistry model coupled to a sediment model
Simple Eulerian-Lagrangian approach to solve equations for sinking particulate organic matter in the ocean
Satellite-based modeling of wetland methane emissions on a global scale (SatWetCH4 1.0)
Evaluating the performance of CE-QUAL-W2 version 4.5 sediment diagenesis model
Representing high-latitude deep carbon in the pre-industrial state of the ORCHIDEE-MICT land surface model (r8704)
Systematic underestimation of type-specific ecosystem process variability in the Community Land Model v5 over Europe
Lambda-PFLOTRAN 1.0: a workflow for incorporating organic matter chemistry informed by ultra high resolution mass spectrometry into biogeochemical modeling
A trait-based model to describe plant community dynamics in managed grasslands (GrasslandTraitSim.jl v1.0.0)
An improved model for air–sea exchange of elemental mercury in MITgcm-ECCOv4-Hg: the role of surfactants and waves
BOATSv2: new ecological and economic features improve simulations of high seas catch and effort
A dynamical process-based model for quantifying global agricultural ammonia emissions – AMmonia–CLIMate v1.0 (AMCLIM v1.0) – Part 1: Land module for simulating emissions from synthetic fertilizer use
Data-Informed Inversion Model (DIIM): a framework to retrieve marine optical constituents in the BOUSSOLE site using a three-stream irradiance model
Simulating Ips typographus L. outbreak dynamics and their influence on carbon balance estimates with ORCHIDEE r8627
Biological nitrogen fixation of natural and agricultural vegetation simulated with LPJmL 5.7.9
BIOPERIANT12: a mesoscale resolving coupled physics-biogeochemical model for the Southern Ocean
Learning from conceptual models – a study of the emergence of cooperation towards resource protection in a social–ecological system
TROLL 4.0: representing water and carbon fluxes, leaf phenology and intraspecific trait variation in a mixed-species individual-based forest dynamics model – Part 1: Model description
The biogeochemical model Biome-BGCMuSo v6.2 provides plausible and accurate simulations of the carbon cycle in central European beech forests
TROLL 4.0: representing water and carbon fluxes, leaf phenology, and intraspecific trait variation in a mixed-species individual-based forest dynamics model – Part 2: Model evaluation for two Amazonian sites
Sunburned plankton: Ultraviolet radiation inhibition of phytoplankton photosynthesis in the Community Earth System Model version 2
DeepPhenoMem V1.0: deep learning modelling of canopy greenness dynamics accounting for multi-variate meteorological memory effects on vegetation phenology
Impacts of land-use change on biospheric carbon: an oriented benchmark using the ORCHIDEE land surface model
Implementing the iCORAL (version 1.0) coral reef CaCO3 production module in the iLOVECLIM climate model
Assimilation of carbonyl sulfide (COS) fluxes within the adjoint-based data assimilation system – Nanjing University Carbon Assimilation System (NUCAS v1.0)
Quantifying the role of ozone-caused damage to vegetation in the Earth system: a new parameterization scheme for photosynthetic and stomatal responses
Radiocarbon analysis reveals underestimation of soil organic carbon persistence in new-generation soil models
Exploring the potential of history matching for land surface model calibration
EAT v1.0.0: a 1D test bed for physical–biogeochemical data assimilation in natural waters
Using deep learning to integrate paleoclimate and global biogeochemistry over the Phanerozoic Eon
Modelling boreal forest's mineral soil and peat C dynamics with the Yasso07 model coupled with the Ricker moisture modifier
Lei Zhu, Philippe Ciais, Yitong Yao, Daniel Goll, Sebastiaan Luyssaert, Isabel Martínez Cano, Arthur Fendrich, Laurent Li, Hui Yang, Sassan Saatchi, and Wei Li
Geosci. Model Dev., 18, 4915–4933, https://doi.org/10.5194/gmd-18-4915-2025, https://doi.org/10.5194/gmd-18-4915-2025, 2025
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This study enhances the accuracy of modeling the carbon dynamics of the Amazon rainforest by optimizing key model parameters based on satellite data. Using spatially varying parameters for tree mortality and photosynthesis, we improved predictions of biomass, productivity, and tree mortality. Our findings highlight the critical role of wood density and water availability in forest processes, offering insights to use in refining global carbon cycle models.
Benjamin F. Meyer, João P. Darela-Filho, Konstantin Gregor, Allan Buras, Qiao-Lin Gu, Andreas Krause, Daijun Liu, Phillip Papastefanou, Sijeh Asuk, Thorsten E. E. Grams, Christian S. Zang, and Anja Rammig
Geosci. Model Dev., 18, 4643–4666, https://doi.org/10.5194/gmd-18-4643-2025, https://doi.org/10.5194/gmd-18-4643-2025, 2025
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Climate change has increased the likelihood of drought events across Europe, potentially threatening the European forest carbon sink. Dynamic vegetation models with mechanistic plant hydraulic architecture are needed to model these developments. We evaluate the plant hydraulic architecture version of LPJ-GUESS and show its ability to capture species-specific evapotranspiration responses to drought and to reproduce flux observations of both gross primary production and evapotranspiration.
Theo Glauch, Julia Marshall, Christoph Gerbig, Santiago Botía, Michał Gałkowski, Sanam N. Vardag, and André Butz
Geosci. Model Dev., 18, 4713–4742, https://doi.org/10.5194/gmd-18-4713-2025, https://doi.org/10.5194/gmd-18-4713-2025, 2025
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The Vegetation Photosynthesis and Respiration Model (VPRM) estimates carbon exchange between the atmosphere and biosphere by modeling gross primary production and respiration using satellite data and weather variables. Our new version, pyVPRM, supports diverse satellite products like Sentinel-2, MODIS, VIIRS, and new land cover maps, enabling high spatial and temporal resolution. This improves flux estimates, especially in complex landscapes, and ensures continuity as MODIS nears decommissioning.
Carolina Natel, David Martín Belda, Peter Anthoni, Neele Haß, Sam Rabin, and Almut Arneth
Geosci. Model Dev., 18, 4317–4333, https://doi.org/10.5194/gmd-18-4317-2025, https://doi.org/10.5194/gmd-18-4317-2025, 2025
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We developed fast machine learning models to predict forest regrowth and carbon dynamics under climate change. These models mimic the outputs of a complex vegetation model but run 95 % faster, enabling global analyses and supporting climate solutions in large modeling frameworks such as LandSyMM.
Ye Liu, Huilin Huang, Sing-Chun Wang, Tao Zhang, Donghui Xu, and Yang Chen
Geosci. Model Dev., 18, 4103–4117, https://doi.org/10.5194/gmd-18-4103-2025, https://doi.org/10.5194/gmd-18-4103-2025, 2025
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This study integrates machine learning with a land surface model to improve wildfire predictions in North America. Traditional models struggle with accurately simulating burned areas due to simplified processes. By combining the predictive power of machine learning with a land model, our hybrid framework better captures fire dynamics. This approach enhances our understanding of wildfire behavior and aids in developing more effective climate and fire management strategies.
Daehyuk Kim, Hyun-Chae Jung, Jae-Hong Moon, and Na-Hyeon Lee
Geosci. Model Dev., 18, 3941–3964, https://doi.org/10.5194/gmd-18-3941-2025, https://doi.org/10.5194/gmd-18-3941-2025, 2025
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Physical–biogeochemical ocean global models are required to analyze difficult oceanic environmental systems. To accurately understand the physical–biogeochemical processes at the regional scale, physical and biogeochemical models were coupled at a high resolution. The results successfully simulated the seasonal variations of chlorophyll and nutrients, particularly in the marginal seas, which were not captured by global models. The developed model is an important tool for studying physical–biogeochemical processes.
Elchin E. Jafarov, Hélène Genet, Velimir V. Vesselinov, Valeria Briones, Aiza Kabeer, Andrew L. Mullen, Benjamin Maglio, Tobey Carman, Ruth Rutter, Joy Clein, Chu-Chun Chang, Dogukan Teber, Trevor Smith, Joshua M. Rady, Christina Schädel, Jennifer D. Watts, Brendan M. Rogers, and Susan M. Natali
Geosci. Model Dev., 18, 3857–3875, https://doi.org/10.5194/gmd-18-3857-2025, https://doi.org/10.5194/gmd-18-3857-2025, 2025
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This study improves how we tune ecosystem models to reflect carbon and nitrogen storage in Arctic soils. By comparing model outputs with data from a black spruce forest in Alaska, we developed a clearer, more efficient method of matching observations. This is a key step towards understanding how Arctic ecosystems may respond to warming and release carbon, helping make future climate predictions more reliable.
Sergi Molins, Benjamin J. Andre, Jeffrey N. Johnson, Glenn E. Hammond, Benjamin N. Sulman, Konstantin Lipnikov, Marcus S. Day, James J. Beisman, Daniil Svyatsky, Hang Deng, Peter C. Lichtner, Carl I. Steefel, and J. David Moulton
Geosci. Model Dev., 18, 3241–3263, https://doi.org/10.5194/gmd-18-3241-2025, https://doi.org/10.5194/gmd-18-3241-2025, 2025
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Developing scientific software and making sure it functions properly requires a significant effort. As we advance our understanding of natural systems, however, there is the need to develop yet more complex models and codes. In this work, we present a piece of software that facilitates this work, specifically with regard to reactive processes. Existing tried-and-true codes are made available via this new interface, freeing up resources to focus on the new aspects of the problems at hand.
Jianyong Ma, Almut Arneth, Benjamin Smith, Peter Anthoni, Xu-Ri, Peter Eliasson, David Wårlind, Martin Wittenbrink, and Stefan Olin
Geosci. Model Dev., 18, 3131–3155, https://doi.org/10.5194/gmd-18-3131-2025, https://doi.org/10.5194/gmd-18-3131-2025, 2025
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Nitrous oxide (N2O) is a powerful greenhouse gas mainly released from natural and agricultural soils. This study examines how global soil N2O emissions changed from 1961 to 2020 and identifies key factors driving these changes using an ecological model. The findings highlight croplands as the largest source, with factors like fertilizer use and climate change enhancing emissions. Rising CO2 levels, however, can partially mitigate N2O emissions through increased plant nitrogen uptake.
Hoa Nguyen, Ute Daewel, Neil Banas, and Corinna Schrum
Geosci. Model Dev., 18, 2961–2982, https://doi.org/10.5194/gmd-18-2961-2025, https://doi.org/10.5194/gmd-18-2961-2025, 2025
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Parameterization is key in modeling to reproduce observations well but is often done manually. This study presents a particle-swarm-optimizer-based toolbox for marine ecosystem models, compatible with the Framework for Aquatic Biogeochemical Models, thus enhancing its reusability. Applied to the Sylt ecosystem, the toolbox effectively (1) identified multiple parameter sets that matched observations well, providing different insights into ecosystem dynamics, and (2) optimized model complexity.
Zavud Baghirov, Martin Jung, Markus Reichstein, Marco Körner, and Basil Kraft
Geosci. Model Dev., 18, 2921–2943, https://doi.org/10.5194/gmd-18-2921-2025, https://doi.org/10.5194/gmd-18-2921-2025, 2025
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We use an innovative approach to studying the Earth's water cycle by integrating advanced machine learning techniques with a traditional water cycle model. Our model is designed to learn from observational data, with a particular emphasis on understanding the influence of vegetation on water movement. By closely aligning with real-world observations, our model offers new possibilities for enhancing our understanding of the water cycle and its interactions with vegetation.
Naveenkumar Parameswaran, Everardo González, Ewa Burwicz-Galerne, Malte Braack, and Klaus Wallmann
Geosci. Model Dev., 18, 2521–2544, https://doi.org/10.5194/gmd-18-2521-2025, https://doi.org/10.5194/gmd-18-2521-2025, 2025
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Our research uses deep learning to predict organic carbon stocks in ocean sediments, which is crucial for understanding their role in the global carbon cycle. By analysing over 22 000 samples and various seafloor characteristics, our model gives more accurate results than traditional methods. We estimate that the top 10 cm of ocean sediments hold about 156 Pg of carbon. This work enhances carbon stock estimates and helps plan future sampling strategies to better understand oceanic carbon burial.
Zhengyang Lin, Ling Huang, Hanqin Tian, Anping Chen, and Xuhui Wang
Geosci. Model Dev., 18, 2509–2520, https://doi.org/10.5194/gmd-18-2509-2025, https://doi.org/10.5194/gmd-18-2509-2025, 2025
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The China Wildfire Emission Dataset (ChinaWED v1) estimated wildfire emissions in China during 2012–2022 as 78.13 Tg CO2, 279.47 Gg CH4, and 6.26 Gg N2O annually. Agricultural fires dominated emissions, while forest and grassland emissions decreased. Seasonal peaks occurred in late spring, with hotspots in northeast, southwest, and east China. The model emphasizes the importance of using localized emission factors and high-resolution fire estimates for accurate assessments.
Tatsuya Miyauchi, Makoto Saito, Hibiki M. Noda, Akihiko Ito, Tomomichi Kato, and Tsuneo Matsunaga
Geosci. Model Dev., 18, 2329–2347, https://doi.org/10.5194/gmd-18-2329-2025, https://doi.org/10.5194/gmd-18-2329-2025, 2025
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Solar-induced chlorophyll fluorescence (SIF) is an effective indicator for monitoring photosynthetic activity. This paper introduces VISIT-SIF, a biogeochemical model developed based on the Vegetation Integrative Simulator for Trace gases (VISIT) to represent satellite-observed SIF. Our simulations reproduced the global distribution and seasonal variations in observed SIF. VISIT-SIF helps to improve photosynthetic processes through a combination of biogeochemical modeling and observed SIF.
Wim Verbruggen, David Wårlind, Stéphanie Horion, Félicien Meunier, Hans Verbeeck, and Guy Schurgers
EGUsphere, https://doi.org/10.5194/egusphere-2025-1259, https://doi.org/10.5194/egusphere-2025-1259, 2025
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We improved the representation of soil water movement in a state-of-the-art dynamic vegetation model. This is especially important for dry ecosystems, as they are often driven by changes in soil water availability. We showed that this update resulted in a generally better match with observations, and that the updated model is more sensitive to soil texture. This updated model will help scientists to better understand the future of dry ecosystems under climate change.
Mateus Dantas de Paula, Matthew Forrest, David Warlind, João Paulo Darela Filho, Katrin Fleischer, Anja Rammig, and Thomas Hickler
Geosci. Model Dev., 18, 2249–2274, https://doi.org/10.5194/gmd-18-2249-2025, https://doi.org/10.5194/gmd-18-2249-2025, 2025
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Our study maps global nitrogen (N) and phosphorus (P) availability and how they changed from 1901 to 2018. We find that tropical regions are mostly P-limited, while temperate and boreal areas face N limitations. Over time, P limitation increased, especially in the tropics, while N limitation decreased. These shifts are key to understanding global plant growth and carbon storage, highlighting the importance of including P dynamics in ecosystem models.
Wolfgang Knorr, Matthew Williams, Tea Thum, Thomas Kaminski, Michael Voßbeck, Marko Scholze, Tristan Quaife, T. Luke Smallman, Susan C. Steele-Dunne, Mariette Vreugdenhil, Tim Green, Sönke Zaehle, Mika Aurela, Alexandre Bouvet, Emanuel Bueechi, Wouter Dorigo, Tarek S. El-Madany, Mirco Migliavacca, Marika Honkanen, Yann H. Kerr, Anna Kontu, Juha Lemmetyinen, Hannakaisa Lindqvist, Arnaud Mialon, Tuuli Miinalainen, Gaétan Pique, Amanda Ojasalo, Shaun Quegan, Peter J. Rayner, Pablo Reyes-Muñoz, Nemesio Rodríguez-Fernández, Mike Schwank, Jochem Verrelst, Songyan Zhu, Dirk Schüttemeyer, and Matthias Drusch
Geosci. Model Dev., 18, 2137–2159, https://doi.org/10.5194/gmd-18-2137-2025, https://doi.org/10.5194/gmd-18-2137-2025, 2025
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When it comes to climate change, the land surface is where the vast majority of impacts happen. The task of monitoring those impacts across the globe is formidable and must necessarily rely on satellites – at a significant cost: the measurements are only indirect and require comprehensive physical understanding. We have created a comprehensive modelling system that we offer to the research community to explore how satellite data can be better exploited to help us capture the changes that happen on our lands.
Luke Oberhagemann, Maik Billing, Werner von Bloh, Markus Drüke, Matthew Forrest, Simon P. K. Bowring, Jessica Hetzer, Jaime Ribalaygua Batalla, and Kirsten Thonicke
Geosci. Model Dev., 18, 2021–2050, https://doi.org/10.5194/gmd-18-2021-2025, https://doi.org/10.5194/gmd-18-2021-2025, 2025
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Under climate change, the conditions necessary for wildfires to form are occurring more frequently in many parts of the world. To help predict how wildfires will change in future, global fire models are being developed. We analyze and further develop one such model, SPITFIRE. Our work identifies and corrects sources of substantial bias in the model that are important to the global fire modelling field. With this analysis and these developments, we help to provide a basis for future improvements.
Christian Folberth, Artem Baklanov, Nikolay Khabarov, Thomas Oberleitner, Juraj Balkovič, and Rastislav Skalský
EGUsphere, https://doi.org/10.5194/egusphere-2025-862, https://doi.org/10.5194/egusphere-2025-862, 2025
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Global gridded crop models (GGCMs) are important tools in agricultural climate impact assessments but computationally costly. An emergent approach to derive crop productivity estimates similar to those from GGCMs are emulators that mimic the original model, but typically with considerable bias. Here we present a modelling package that trains emulators with very high accuracy and high computational gain, providing a basis for more comprehensive scenario assessments.
Trine Frisbæk Hansen, Donald Eugene Canfield, Ken Haste Andersen, and Christian Jannik Bjerrum
Geosci. Model Dev., 18, 1895–1916, https://doi.org/10.5194/gmd-18-1895-2025, https://doi.org/10.5194/gmd-18-1895-2025, 2025
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We describe and test the size-based Nutrient-Unicellular-Multicellular model, which defines unicellular plankton using a single set of parameters, on a eutrophic and oligotrophic ecosystem. The results demonstrate that both sites can be modeled with similar parameters and robust performance over a wide range of parameters. The study shows that the model is useful for non-experts and applicable for modeling ecosystems with limited data. It holds promise for evolutionary and deep-time climate models.
Ying Ye, Guy Munhoven, Peter Köhler, Martin Butzin, Judith Hauck, Özgür Gürses, and Christoph Völker
Geosci. Model Dev., 18, 977–1000, https://doi.org/10.5194/gmd-18-977-2025, https://doi.org/10.5194/gmd-18-977-2025, 2025
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Many biogeochemistry models assume all material reaching the seafloor is remineralized and returned to solution, which is sufficient for studies on short-term climate change. Under long-term climate change, the carbon storage in sediments slows down carbon cycling and influences feedbacks in the atmosphere–ocean–sediment system. This paper describes the coupling of a sediment model to an ocean biogeochemistry model and presents results under the pre-industrial climate and under CO2 perturbation.
Vladimir Maderich, Igor Brovchenko, Kateryna Kovalets, Seongbong Seo, and Kyeong Ok Kim
EGUsphere, https://doi.org/10.5194/egusphere-2025-491, https://doi.org/10.5194/egusphere-2025-491, 2025
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We have developed a new simple Eulerian-Lagrangian approach to solve equations for sinking particulate organic matter in the ocean. We rely on the known parameterizations, but our approach to solving the problem differs, allowing the algorithm to be incorporated into biogeochemical global ocean models with relative ease. New analytical and numerical solutions confirmed that feedback between degradation rate and sinking velocity significantly changes particulate matter fluxes.
Juliette Bernard, Elodie Salmon, Marielle Saunois, Shushi Peng, Penélope Serrano-Ortiz, Antoine Berchet, Palingamoorthy Gnanamoorthy, Joachim Jansen, and Philippe Ciais
Geosci. Model Dev., 18, 863–883, https://doi.org/10.5194/gmd-18-863-2025, https://doi.org/10.5194/gmd-18-863-2025, 2025
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Despite their importance, uncertainties remain in the evaluation of the drivers of temporal variability of methane emissions from wetlands on a global scale. Here, a simplified global model is developed, taking advantage of advances in remote-sensing data and in situ observations. The model reproduces the large spatial and temporal patterns of emissions, albeit with limitations in the tropics due to data scarcity. This model, while simple, can provide valuable insights into sensitivity analyses.
Manuel Almeida and Pedro Coelho
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-202, https://doi.org/10.5194/gmd-2024-202, 2025
Preprint under review for GMD
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This study aims to assess the capabilities of the advanced CE-QUAL-W2 v4.5 sediment diagenesis model, focusing on its application to a reservoir in Portugal over a six-year period (2016–2021). Our findings indicate that the model performs very well in simulating dissolved oxygen profiles, nutrient concentrations, and organic matter levels.
Yi Xi, Philippe Ciais, Dan Zhu, Chunjing Qiu, Yuan Zhang, Shushi Peng, Gustaf Hugelius, Simon P. K. Bowring, Daniel S. Goll, and Ying-Ping Wang
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-206, https://doi.org/10.5194/gmd-2024-206, 2025
Revised manuscript accepted for GMD
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Including high-latitude deep carbon is critical for projecting future soil carbon emissions, yet it’s absent in most land surface models. Here we propose a new carbon accumulation protocol by integrating deep carbon from Yedoma deposits and representing the observed history of peat carbon formation in ORCHIDEE-MICT. Our results show an additional 157 PgC in present-day Yedoma deposits and a 1–5 m shallower peat depth, 43 % less passive soil carbon in peatlands against the convention protocol.
Christian Poppe Terán, Bibi S. Naz, Harry Vereecken, Roland Baatz, Rosie A. Fisher, and Harrie-Jan Hendricks Franssen
Geosci. Model Dev., 18, 287–317, https://doi.org/10.5194/gmd-18-287-2025, https://doi.org/10.5194/gmd-18-287-2025, 2025
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Carbon and water exchanges between the atmosphere and the land surface contribute to water resource availability and climate change mitigation. Land surface models, like the Community Land Model version 5 (CLM5), simulate these. This study finds that CLM5 and other data sets underestimate the magnitudes of and variability in carbon and water exchanges for the most abundant plant functional types compared to observations. It provides essential insights for further research into these processes.
Katherine A. Muller, Peishi Jiang, Glenn Hammond, Tasneem Ahmadullah, Hyun-Seob Song, Ravi Kukkadapu, Nicholas Ward, Madison Bowe, Rosalie K. Chu, Qian Zhao, Vanessa A. Garayburu-Caruso, Alan Roebuck, and Xingyuan Chen
Geosci. Model Dev., 17, 8955–8968, https://doi.org/10.5194/gmd-17-8955-2024, https://doi.org/10.5194/gmd-17-8955-2024, 2024
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The new Lambda-PFLOTRAN workflow incorporates organic matter chemistry into reaction networks to simulate aerobic respiration and biogeochemistry. Lambda-PFLOTRAN is a Python-based workflow in a Jupyter notebook interface that digests raw organic matter chemistry data via Fourier transform ion cyclotron resonance mass spectrometry, develops a representative reaction network, and completes a biogeochemical simulation with the open-source, parallel-reactive-flow, and transport code PFLOTRAN.
Felix Nößler, Thibault Moulin, Oksana Buzhdygan, Britta Tietjen, and Felix May
EGUsphere, https://doi.org/10.5194/egusphere-2024-3798, https://doi.org/10.5194/egusphere-2024-3798, 2024
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To predict the response of grassland plant communities to management and climate change, we developed the computer model GrasslandTraitSim.jl. Unlike other models, it uses measurable plant traits such as height, leaf thinness, and root structure as inputs, rather than hard-to-measure species data. This allows realistic simulation of many species. The model tracks daily changes in above- and below-ground biomass, plant height, and soil water, linking plant community composition to biomass supply.
Ling Li, Peipei Wu, Peng Zhang, Shaojian Huang, and Yanxu Zhang
Geosci. Model Dev., 17, 8683–8695, https://doi.org/10.5194/gmd-17-8683-2024, https://doi.org/10.5194/gmd-17-8683-2024, 2024
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In this study, we incorporate sea surfactants and wave-breaking processes into MITgcm-ECCOv4-Hg. The updated model shows increased fluxes in high-wind-speed and high-wave regions and vice versa, enhancing spatial heterogeneity. It shows that elemental mercury (Hg0) transfer velocity is more sensitive to wind speed. These findings may elucidate the discrepancies in previous estimations and offer insights into global Hg cycling.
Jerome Guiet, Daniele Bianchi, Kim J. N. Scherrer, Ryan F. Heneghan, and Eric D. Galbraith
Geosci. Model Dev., 17, 8421–8454, https://doi.org/10.5194/gmd-17-8421-2024, https://doi.org/10.5194/gmd-17-8421-2024, 2024
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The BiOeconomic mArine Trophic Size-spectrum (BOATSv2) model dynamically simulates global commercial fish populations and their coupling with fishing activity, as emerging from environmental and economic drivers. New features, including separate pelagic and demersal populations, iron limitation, and spatial variation of fishing costs and management, improve the accuracy of high seas fisheries. The updated model code is available to simulate both historical and future scenarios.
Jize Jiang, David S. Stevenson, and Mark A. Sutton
Geosci. Model Dev., 17, 8181–8222, https://doi.org/10.5194/gmd-17-8181-2024, https://doi.org/10.5194/gmd-17-8181-2024, 2024
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A special model called AMmonia–CLIMate (AMCLIM) has been developed to understand and calculate NH3 emissions from fertilizer use and also taking into account how the environment influences these NH3 emissions. It is estimated that about 17 % of applied N in fertilizers was lost due to NH3 emissions. Hot and dry conditions and regions with high-pH soils can expect higher NH3 emissions.
Carlos Enmanuel Soto López, Fabio Anselmi, Mirna Gharbi Dit Kacem, and Paolo Lazzari
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-174, https://doi.org/10.5194/gmd-2024-174, 2024
Revised manuscript accepted for GMD
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Our goal was to use an analytical expression to estimate the density of optical constituents, allowing us to have an interpretable formulation consistent with the laws of physics. We focused on a probabilistic approach, optimizing the model and retrieving quantities with their respective uncertainty. Considering future application to Big Data, we also explored a Neural Network based method, retrieving computationally efficient estimates, maintaining consistency with the analytical expression.
Guillaume Marie, Jina Jeong, Hervé Jactel, Gunnar Petter, Maxime Cailleret, Matthew J. McGrath, Vladislav Bastrikov, Josefine Ghattas, Bertrand Guenet, Anne Sofie Lansø, Kim Naudts, Aude Valade, Chao Yue, and Sebastiaan Luyssaert
Geosci. Model Dev., 17, 8023–8047, https://doi.org/10.5194/gmd-17-8023-2024, https://doi.org/10.5194/gmd-17-8023-2024, 2024
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This research looks at how climate change influences forests, and particularly how altered wind and insect activities could make forests emit instead of absorb carbon. We have updated a land surface model called ORCHIDEE to better examine the effect of bark beetles on forest health. Our findings suggest that sudden events, such as insect outbreaks, can dramatically affect carbon storage, offering crucial insights into tackling climate change.
Stephen Björn Wirth, Johanna Braun, Jens Heinke, Sebastian Ostberg, Susanne Rolinski, Sibyll Schaphoff, Fabian Stenzel, Werner von Bloh, Friedhelm Taube, and Christoph Müller
Geosci. Model Dev., 17, 7889–7914, https://doi.org/10.5194/gmd-17-7889-2024, https://doi.org/10.5194/gmd-17-7889-2024, 2024
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We present a new approach to modelling biological nitrogen fixation (BNF) in the Lund–Potsdam–Jena managed Land dynamic global vegetation model. While in the original approach BNF depended on actual evapotranspiration, the new approach considers soil water content and temperature, vertical root distribution, the nitrogen (N) deficit and carbon (C) costs. The new approach improved simulated BNF compared to the scientific literature and the model ability to project future C and N cycle dynamics.
Nicolette Chang, Sarah-Anne Nicholson, Marcel du Plessis, Alice D. Lebehot, Thulwaneng Mashifane, Tumelo C. Moalusi, N. Precious Mongwe, and Pedro M. S. Monteiro
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-182, https://doi.org/10.5194/gmd-2024-182, 2024
Revised manuscript accepted for GMD
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Mesoscale features (10's to 100's of km) in the Southern Ocean (SO) are crucial for global heat and carbon transport, but often unresolved in models due to high computational costs. To address this source of uncertainty, we use a regional, NEMO model of the SO at 8 km resolution with coupled ocean, ice, and biogeochemistry, BIOPERIANT12. This serves as an experimental platform to explore physical-biogeochemical interactions, model parameters/formulations, and configuring future models.
Saeed Harati-Asl, Liliana Perez, and Roberto Molowny-Horas
Geosci. Model Dev., 17, 7423–7443, https://doi.org/10.5194/gmd-17-7423-2024, https://doi.org/10.5194/gmd-17-7423-2024, 2024
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Social–ecological systems are the subject of many sustainability problems. Because of the complexity of these systems, we must be careful when intervening in them; otherwise we may cause irreversible damage. Using computer models, we can gain insight about these complex systems without harming them. In this paper we describe how we connected an ecological model of forest insect infestation with a social model of cooperation and simulated an intervention measure to save a forest from infestation.
Isabelle Maréchaux, Fabian Jörg Fischer, Sylvain Schmitt, and Jérôme Chave
EGUsphere, https://doi.org/10.5194/egusphere-2024-3104, https://doi.org/10.5194/egusphere-2024-3104, 2024
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We describe TROLL 4.0, a simulator of forest dynamics that represents trees in a virtual space at one-meter resolution. Tree birth, growth, death and the underlying physiological processes such as carbon assimilation, water transpiration and leaf phenology depend on plant traits that are measured in the field for many individuals and species. The model is thus capable of jointly simulating forest structure, diversity and ecosystem functioning, a major challenge in modelling vegetation dynamics.
Katarína Merganičová, Ján Merganič, Laura Dobor, Roland Hollós, Zoltán Barcza, Dóra Hidy, Zuzana Sitková, Pavel Pavlenda, Hrvoje Marjanovic, Daniel Kurjak, Michal Bošel'a, Doroteja Bitunjac, Maša Zorana Ostrogović Sever, Jiří Novák, Peter Fleischer, and Tomáš Hlásny
Geosci. Model Dev., 17, 7317–7346, https://doi.org/10.5194/gmd-17-7317-2024, https://doi.org/10.5194/gmd-17-7317-2024, 2024
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We developed a multi-objective calibration approach leading to robust parameter values aiming to strike a balance between their local precision and broad applicability. Using the Biome-BGCMuSo model, we tested the calibrated parameter sets for simulating European beech forest dynamics across large environmental gradients. Leveraging data from 87 plots and five European countries, the results demonstrated reasonable local accuracy and plausible large-scale productivity responses.
Sylvain Schmitt, Fabian Fischer, James Ball, Nicolas Barbier, Marion Boisseaux, Damien Bonal, Benoit Burban, Xiuzhi Chen, Géraldine Derroire, Jeremy Lichstein, Daniela Nemetschek, Natalia Restrepo-Coupe, Scott Saleska, Giacomo Sellan, Philippe Verley, Grégoire Vincent, Camille Ziegler, Jérôme Chave, and Isabelle Maréchaux
EGUsphere, https://doi.org/10.5194/egusphere-2024-3106, https://doi.org/10.5194/egusphere-2024-3106, 2024
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We evaluate the capability of TROLL 4.0, a simulator of forest dynamics, to represent tropical forest structure, diversity and functioning in two Amazonian forests. Evaluation data include forest inventories, carbon and water fluxes between the forest and the atmosphere, and leaf area and canopy height from remote-sensing products. The model realistically predicts the structure and composition, and the seasonality of carbon and water fluxes at both sites.
Joshua Coupe, Nicole S. Lovenduski, Luise S. Gleason, Michael N. Levy, Kristen Krumhardt, Keith Lindsay, Charles Bardeen, Clay Tabor, Cheryl Harrison, Kenneth G. MacLeod, Siddhartha Mitra, and Julio Sepúlveda
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-94, https://doi.org/10.5194/gmd-2024-94, 2024
Revised manuscript accepted for GMD
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We develop a new feature in the atmosphere and ocean components of the Community Earth System Model version 2. We have implemented ultraviolet (UV) radiation inhibition of photosynthesis of four marine phytoplankton functional groups represented in the Marine Biogeochemistry Library. The new feature is tested with varying levels of UV radiation. The new feature will enable an analysis of an asteroid impact’s effect on the ozone layer and how that affects the base of the marine food web.
Guohua Liu, Mirco Migliavacca, Christian Reimers, Basil Kraft, Markus Reichstein, Andrew D. Richardson, Lisa Wingate, Nicolas Delpierre, Hui Yang, and Alexander J. Winkler
Geosci. Model Dev., 17, 6683–6701, https://doi.org/10.5194/gmd-17-6683-2024, https://doi.org/10.5194/gmd-17-6683-2024, 2024
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Our study employs long short-term memory (LSTM) networks to model canopy greenness and phenology, integrating meteorological memory effects. The LSTM model outperforms traditional methods, enhancing accuracy in predicting greenness dynamics and phenological transitions across plant functional types. Highlighting the importance of multi-variate meteorological memory effects, our research pioneers unlock the secrets of vegetation phenology responses to climate change with deep learning techniques.
Thi Lan Anh Dinh, Daniel Goll, Philippe Ciais, and Ronny Lauerwald
Geosci. Model Dev., 17, 6725–6744, https://doi.org/10.5194/gmd-17-6725-2024, https://doi.org/10.5194/gmd-17-6725-2024, 2024
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The study assesses the performance of the dynamic global vegetation model (DGVM) ORCHIDEE in capturing the impact of land-use change on carbon stocks across Europe. Comparisons with observations reveal that the model accurately represents carbon fluxes and stocks. Despite the underestimations in certain land-use conversions, the model describes general trends in soil carbon response to land-use change, aligning with the site observations.
Nathaelle Bouttes, Lester Kwiatkowski, Manon Berger, Victor Brovkin, and Guy Munhoven
Geosci. Model Dev., 17, 6513–6528, https://doi.org/10.5194/gmd-17-6513-2024, https://doi.org/10.5194/gmd-17-6513-2024, 2024
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Coral reefs are crucial for biodiversity, but they also play a role in the carbon cycle on long time scales of a few thousand years. To better simulate the future and past evolution of coral reefs and their effect on the global carbon cycle, hence on atmospheric CO2 concentration, it is necessary to include coral reefs within a climate model. Here we describe the inclusion of coral reef carbonate production in a carbon–climate model and its validation in comparison to existing modern data.
Huajie Zhu, Mousong Wu, Fei Jiang, Michael Vossbeck, Thomas Kaminski, Xiuli Xing, Jun Wang, Weimin Ju, and Jing M. Chen
Geosci. Model Dev., 17, 6337–6363, https://doi.org/10.5194/gmd-17-6337-2024, https://doi.org/10.5194/gmd-17-6337-2024, 2024
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In this work, we developed the Nanjing University Carbon Assimilation System (NUCAS v1.0). Data assimilation experiments were conducted to demonstrate the robustness and investigate the feasibility and applicability of NUCAS. The assimilation of ecosystem carbonyl sulfide (COS) fluxes improved the model performance in gross primary productivity, evapotranspiration, and sensible heat, showing that COS provides constraints on parameters relevant to carbon-, water-, and energy-related processes.
Fang Li, Zhimin Zhou, Samuel Levis, Stephen Sitch, Felicity Hayes, Zhaozhong Feng, Peter B. Reich, Zhiyi Zhao, and Yanqing Zhou
Geosci. Model Dev., 17, 6173–6193, https://doi.org/10.5194/gmd-17-6173-2024, https://doi.org/10.5194/gmd-17-6173-2024, 2024
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A new scheme is developed to model the surface ozone damage to vegetation in regional and global process-based models. Based on 4210 data points from ozone experiments, it accurately reproduces statistically significant linear or nonlinear photosynthetic and stomatal responses to ozone in observations for all vegetation types. It also enables models to implicitly capture the variability in plant ozone tolerance and the shift among species within a vegetation type.
Alexander S. Brunmayr, Frank Hagedorn, Margaux Moreno Duborgel, Luisa I. Minich, and Heather D. Graven
Geosci. Model Dev., 17, 5961–5985, https://doi.org/10.5194/gmd-17-5961-2024, https://doi.org/10.5194/gmd-17-5961-2024, 2024
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A new generation of soil models promises to more accurately predict the carbon cycle in soils under climate change. However, measurements of 14C (the radioactive carbon isotope) in soils reveal that the new soil models face similar problems to the traditional models: they underestimate the residence time of carbon in soils and may therefore overestimate the net uptake of CO2 by the land ecosystem. Proposed solutions include restructuring the models and calibrating model parameters with 14C data.
Nina Raoult, Simon Beylat, James M. Salter, Frédéric Hourdin, Vladislav Bastrikov, Catherine Ottlé, and Philippe Peylin
Geosci. Model Dev., 17, 5779–5801, https://doi.org/10.5194/gmd-17-5779-2024, https://doi.org/10.5194/gmd-17-5779-2024, 2024
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We use computer models to predict how the land surface will respond to climate change. However, these complex models do not always simulate what we observe in real life, limiting their effectiveness. To improve their accuracy, we use sophisticated statistical and computational techniques. We test a technique called history matching against more common approaches. This method adapts well to these models, helping us better understand how they work and therefore how to make them more realistic.
Jorn Bruggeman, Karsten Bolding, Lars Nerger, Anna Teruzzi, Simone Spada, Jozef Skákala, and Stefano Ciavatta
Geosci. Model Dev., 17, 5619–5639, https://doi.org/10.5194/gmd-17-5619-2024, https://doi.org/10.5194/gmd-17-5619-2024, 2024
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To understand and predict the ocean’s capacity for carbon sequestration, its ability to supply food, and its response to climate change, we need the best possible estimate of its physical and biogeochemical properties. This is obtained through data assimilation which blends numerical models and observations. We present the Ensemble and Assimilation Tool (EAT), a flexible and efficient test bed that allows any scientist to explore and further develop the state of the art in data assimilation.
Dongyu Zheng, Andrew S. Merdith, Yves Goddéris, Yannick Donnadieu, Khushboo Gurung, and Benjamin J. W. Mills
Geosci. Model Dev., 17, 5413–5429, https://doi.org/10.5194/gmd-17-5413-2024, https://doi.org/10.5194/gmd-17-5413-2024, 2024
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This study uses a deep learning method to upscale the time resolution of paleoclimate simulations to 1 million years. This improved resolution allows a climate-biogeochemical model to more accurately predict climate shifts. The method may be critical in developing new fully continuous methods that are able to be applied over a moving continental surface in deep time with high resolution at reasonable computational expense.
Boris Ťupek, Aleksi Lehtonen, Alla Yurova, Rose Abramoff, Bertrand Guenet, Elisa Bruni, Samuli Launiainen, Mikko Peltoniemi, Shoji Hashimoto, Xianglin Tian, Juha Heikkinen, Kari Minkkinen, and Raisa Mäkipää
Geosci. Model Dev., 17, 5349–5367, https://doi.org/10.5194/gmd-17-5349-2024, https://doi.org/10.5194/gmd-17-5349-2024, 2024
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Updating the Yasso07 soil C model's dependency on decomposition with a hump-shaped Ricker moisture function improved modelled soil organic C (SOC) stocks in a catena of mineral and organic soils in boreal forest. The Ricker function, set to peak at a rate of 1 and calibrated against SOC and CO2 data using a Bayesian approach, showed a maximum in well-drained soils. Using SOC and CO2 data together with the moisture only from the topsoil humus was crucial for accurate model estimates.
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Short summary
By including microbial processes in soil models, we learn how the soil system interacts with its environment and responds to climate change. We present a soil process model, MIMICS+, which is able to reproduce carbon stocks found in boreal forest soils better than a conventional land model. With the model we also find that when adding nitrogen, the relationship between soil microbes changes notably. Coupling the model to a vegetation model will allow for further study of these mechanisms.
By including microbial processes in soil models, we learn how the soil system interacts with its...