Articles | Volume 15, issue 15
https://doi.org/10.5194/gmd-15-6025-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-15-6025-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Development and technical paper
| 
02 Aug 2022
Development and technical paper |
| 02 Aug 2022
| 02 Aug 2022
Parallel implementation of the SHYFEM (System of HydrodYnamic Finite Element Modules) model
Giorgio Micaletto
Euro-Mediterranean Centre on Climate Change Foundation, via Augusto Imperatore 16, 73100 Lecce, Italy
Ivano Barletta
Euro-Mediterranean Centre on Climate Change Foundation, via Augusto Imperatore 16, 73100 Lecce, Italy
Department of Physics and Astronomy, University of Bologna, 40126 Bologna, Italy
Silvia Mocavero
Euro-Mediterranean Centre on Climate Change Foundation, via Augusto Imperatore 16, 73100 Lecce, Italy
Ivan Federico
Euro-Mediterranean Centre on Climate Change Foundation, via Augusto Imperatore 16, 73100 Lecce, Italy
Italo Epicoco
CORRESPONDING AUTHOR
Euro-Mediterranean Centre on Climate Change Foundation, via Augusto Imperatore 16, 73100 Lecce, Italy
Department of Engineering for Innovation, University of Salento, via per Monteroni, 73100 Lecce, Italy
Giorgia Verri
Euro-Mediterranean Centre on Climate Change Foundation, via Augusto Imperatore 16, 73100 Lecce, Italy
Giovanni Coppini
Euro-Mediterranean Centre on Climate Change Foundation, via Augusto Imperatore 16, 73100 Lecce, Italy
Pasquale Schiano
Euro-Mediterranean Centre on Climate Change Foundation, via Augusto Imperatore 16, 73100 Lecce, Italy
Giovanni Aloisio
Euro-Mediterranean Centre on Climate Change Foundation, via Augusto Imperatore 16, 73100 Lecce, Italy
Department of Engineering for Innovation, University of Salento, via per Monteroni, 73100 Lecce, Italy
Nadia Pinardi
Department of Physics and Astronomy, University of Bologna, 40126 Bologna, Italy
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Mahmud Hasan Ghani, Nadia Pinardi, Antonio Navarra, Lorenzo Mentaschi, Silvia Bianconcini, Francesco Maicu, and Francesco Trotta
EGUsphere, https://doi.org/10.5194/egusphere-2025-2867, https://doi.org/10.5194/egusphere-2025-2867, 2025
This preprint is open for discussion and under review for Ocean Science (OS).
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Using the same SST and the same bulk formula, but different atmospheric reanalysis and analysis surface variable datasets, we show that higher resolution (ECMWF) dataset is crucial for evaluating the heat budget closure hypothesis in the Mediterranean Sea. For the first time, we investigate the impact of extreme heat loss events in the Mediterranean Sea in the long-term mean basin-averaged heat budget.
Salvatore Causio, Seimur Shirinov, Ivan Federico, Giovanni De Cillis, Emanuela Clementi, Lorenzo Mentaschi, and Giovanni Coppini
Ocean Sci., 21, 1105–1123, https://doi.org/10.5194/os-21-1105-2025, https://doi.org/10.5194/os-21-1105-2025, 2025
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This study examines how waves and ocean currents interact during severe weather, focusing on Medicane Ianos, one of the strongest storms in the Mediterranean. Using advanced modeling, we created a unique system to simulate these interactions, capturing effects like wave-induced water levels and wave-induced effects on the vertical structure of the ocean. We validated our approach with ideal tests and real data from the storm.
Paolo Oddo, Mario Adani, Francesco Carere, Andrea Cipollone, Anna Chiara Goglio, Eric Jansen, Ali Aydogdu, Francesca Mele, Italo Epicoco, Jenny Pistoia, Emanuela Clementi, Nadia Pinardi, and Simona Masina
EGUsphere, https://doi.org/10.5194/egusphere-2025-1553, https://doi.org/10.5194/egusphere-2025-1553, 2025
This preprint is open for discussion and under review for Geoscientific Model Development (GMD).
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This study present a data assimilation scheme that combines ocean observational data with ocean model results to better understand the ocean and predict its future state. The method uses a variational approach focusing on the physical relationships between all the state vector variables errors. Testing in the Mediterranean Sea showed that a complex sea level operator based on a barotropic model works best.
Rita Lecci, Robyn Gwee, Kun Yan, Sanne Muis, Nadia Pinardi, Jun She, Martin Verlaan, Simona Masina, Wenshan Li, Hui Wang, Salvatore Causio, Antonio Novellino, Marco Alba, Etiënne Kras, Sandra Gaytan Aguilar, and Jan-Bart Calewaert
EGUsphere, https://doi.org/10.5194/egusphere-2025-1763, https://doi.org/10.5194/egusphere-2025-1763, 2025
This preprint is open for discussion and under review for Natural Hazards and Earth System Sciences (NHESS).
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This study explored how sea level is changing along the China-Europe Sea Route. By combining satellite and in-situ observations with advanced modeling, the research identified ongoing sea level rise and an increasing frequency of extreme water level events in some regions. These findings underscore the importance of continued monitoring and provide useful knowledge to support long-term planning, coastal resilience, and informed decision-making.
Italo R. Lopes, Ivan Federico, Michalis Vousdoukas, Luisa Perini, Salvatore Causio, Giovanni Coppini, Maurilio Milella, Nadia Pinardi, and Lorenzo Mentaschi
EGUsphere, https://doi.org/10.5194/egusphere-2025-1695, https://doi.org/10.5194/egusphere-2025-1695, 2025
This preprint is open for discussion and under review for Natural Hazards and Earth System Sciences (NHESS).
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We improved a computer model to simulate coastal flooding by including temporary barriers like sand dunes. We tested it where sand dunes are built seasonally to protect the shoreline for two real storms: one that broke through the dunes and another where dunes held strong. Our model showed how important it is to design these defenses carefully since even if a small part of a dune fails, a major flooding can happen. Overall, our work helps create better tools to manage and protect coastal areas.
Mohammad Hadi Bahmanpour, Alois Tilloy, Michalis Vousdoukas, Ivan Federico, Giovanni Coppini, Luc Feyen, and Lorenzo Mentaschi
EGUsphere, https://doi.org/10.5194/egusphere-2025-843, https://doi.org/10.5194/egusphere-2025-843, 2025
This preprint is open for discussion and under review for Hydrology and Earth System Sciences (HESS).
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As natural hazards evolve, understanding how extreme events interact over time is crucial. While single extremes have been widely studied, joint extremes remain challenging to analyze. We present a framework that combines advanced statistical modeling with copula theory to capture changing dependencies. Applying it to historical data reveals dynamic patterns in extreme events. To support broader use, we provide an open-source tool for improved hazard assessment.
Seimur Shirinov, Ivan Federico, Simone Bonamano, Salvatore Causio, Nicolás Biocca, Viviana Piermattei, Daniele Piazzolla, Jacopo Alessandri, Lorenzo Mentaschi, Giovanni Coppini, Marco Marcelli, and Nadia Pinardi
EGUsphere, https://doi.org/10.5194/egusphere-2025-321, https://doi.org/10.5194/egusphere-2025-321, 2025
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This study explores the impact of submerged vegetation on wave dynamics in vulnerable coastal regions. By incorporating measurements into a numerical model, we estimate the critical role of seagrass as a natural defense system. This research advances understanding of wave-vegetation interactions, achieving a more accurate representation of marine environments while supporting restoration efforts and emphasizing the need to preserve these ecosystems for resilience.
Rodrigo Campos-Caba, Jacopo Alessandri, Paula Camus, Andrea Mazzino, Francesco Ferrari, Ivan Federico, Michalis Vousdoukas, Massimo Tondello, and Lorenzo Mentaschi
Ocean Sci., 20, 1513–1526, https://doi.org/10.5194/os-20-1513-2024, https://doi.org/10.5194/os-20-1513-2024, 2024
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Here we show the development of high-resolution simulations of storm surge in the northern Adriatic Sea employing different atmospheric forcing data and physical configurations. Traditional metrics favor a simulation forced by a coarser database and employing a less sophisticated setup. Closer examination allows us to identify a baroclinic model forced by a high-resolution dataset as being better able to capture the variability and peak values of the storm surge.
José A. Jiménez, Gundula Winter, Antonio Bonaduce, Michael Depuydt, Giulia Galluccio, Bart van den Hurk, H. E. Markus Meier, Nadia Pinardi, Lavinia G. Pomarico, and Natalia Vazquez Riveiros
State Planet, 3-slre1, 3, https://doi.org/10.5194/sp-3-slre1-3-2024, https://doi.org/10.5194/sp-3-slre1-3-2024, 2024
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The Knowledge Hub on Sea Level Rise (SLR) has done a scoping study involving stakeholders from government and academia to identify gaps and needs in SLR information, impacts, and policies across Europe. Gaps in regional SLR projections and uncertainties were found, while concerns were raised about shoreline erosion and emerging problems like saltwater intrusion and ineffective adaptation plans. The need for improved communication to make better decisions on SLR adaptation was highlighted.
Nadia Pinardi, Bart van den Hurk, Michael Depuydt, Thorsten Kiefer, Petra Manderscheid, Lavinia Giulia Pomarico, and Kanika Singh
State Planet, 3-slre1, 2, https://doi.org/10.5194/sp-3-slre1-2-2024, https://doi.org/10.5194/sp-3-slre1-2-2024, 2024
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The Knowledge Hub on Sea Level Rise (KH-SLR), a joint effort between JPI Climate and JPI Oceans, addresses the critical need for science-based information on sea level changes in Europe. The KH-SLR actively involves stakeholders through a co-design process discussing the impacts, adaptation planning, and policy requirements related to SLR in Europe. Its primary output is the KH Assessment Report (KH-AR), which is described in this volume.
Bart van den Hurk, Nadia Pinardi, Alexander Bisaro, Giulia Galluccio, José A. Jiménez, Kate Larkin, Angélique Melet, Lavinia Giulia Pomarico, Kristin Richter, Kanika Singh, Roderik van de Wal, and Gundula Winter
State Planet, 3-slre1, 1, https://doi.org/10.5194/sp-3-slre1-1-2024, https://doi.org/10.5194/sp-3-slre1-1-2024, 2024
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The Summary for Policymakers compiles findings from “Sea Level Rise in Europe: 1st Assessment Report of the Knowledge Hub on Sea Level Rise”. It covers knowledge gaps, observations, projections, impacts, adaptation measures, decision-making principles, and governance challenges. It provides information for each European basin (Mediterranean, Black Sea, North Sea, Baltic Sea, Atlantic, and Arctic) and aims to assist policymakers in enhancing the preparedness of European coasts for sea level rise.
Bethany McDonagh, Emanuela Clementi, Anna Chiara Goglio, and Nadia Pinardi
Ocean Sci., 20, 1051–1066, https://doi.org/10.5194/os-20-1051-2024, https://doi.org/10.5194/os-20-1051-2024, 2024
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Tides in the Mediterranean Sea are typically of low amplitude, but twin experiments with and without tides demonstrate that tides affect the circulation directly at scales away from those of the tides. Analysis of the energy changes due to tides shows that they enhance existing oscillations, and internal tides interact with other internal waves. Tides also increase the mixed layer depth and enhance deep water formation in key regions. Internal tides are widespread in the Mediterranean Sea.
Roberta Benincasa, Giovanni Liguori, Nadia Pinardi, and Hans von Storch
Ocean Sci., 20, 1003–1012, https://doi.org/10.5194/os-20-1003-2024, https://doi.org/10.5194/os-20-1003-2024, 2024
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Ocean dynamics result from the interplay of internal processes and external inputs, primarily from the atmosphere. It is crucial to discern between these factors to gauge the ocean's intrinsic predictability and to be able to attribute a signal under study to either external factors or internal variability. Employing a simple analysis, we successfully characterized this variability in the Mediterranean Sea and compared it with the oceanic response induced by atmospheric conditions.
Skyler Kern, Mary E. McGuinn, Katherine M. Smith, Nadia Pinardi, Kyle E. Niemeyer, Nicole S. Lovenduski, and Peter E. Hamlington
Geosci. Model Dev., 17, 621–649, https://doi.org/10.5194/gmd-17-621-2024, https://doi.org/10.5194/gmd-17-621-2024, 2024
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Computational models are used to simulate the behavior of marine ecosystems. The models often have unknown parameters that need to be calibrated to accurately represent observational data. Here, we propose a novel approach to simultaneously determine a large set of parameters for a one-dimensional model of a marine ecosystem in the surface ocean at two contrasting sites. By utilizing global and local optimization techniques, we estimate many parameters in a computationally efficient manner.
Giovanni Coppini, Emanuela Clementi, Gianpiero Cossarini, Stefano Salon, Gerasimos Korres, Michalis Ravdas, Rita Lecci, Jenny Pistoia, Anna Chiara Goglio, Massimiliano Drudi, Alessandro Grandi, Ali Aydogdu, Romain Escudier, Andrea Cipollone, Vladyslav Lyubartsev, Antonio Mariani, Sergio Cretì, Francesco Palermo, Matteo Scuro, Simona Masina, Nadia Pinardi, Antonio Navarra, Damiano Delrosso, Anna Teruzzi, Valeria Di Biagio, Giorgio Bolzon, Laura Feudale, Gianluca Coidessa, Carolina Amadio, Alberto Brosich, Arnau Miró, Eva Alvarez, Paolo Lazzari, Cosimo Solidoro, Charikleia Oikonomou, and Anna Zacharioudaki
Ocean Sci., 19, 1483–1516, https://doi.org/10.5194/os-19-1483-2023, https://doi.org/10.5194/os-19-1483-2023, 2023
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The paper presents the Mediterranean Forecasting System evolution and performance developed in the framework of the Copernicus Marine Service.
Umesh Pranavam Ayyappan Pillai, Nadia Pinardi, Ivan Federico, Salvatore Causio, Francesco Trotta, Silvia Unguendoli, and Andrea Valentini
Nat. Hazards Earth Syst. Sci., 22, 3413–3433, https://doi.org/10.5194/nhess-22-3413-2022, https://doi.org/10.5194/nhess-22-3413-2022, 2022
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The study presents the application of high-resolution coastal modelling for wave hindcasting on the Emilia-Romagna coastal belt. The generated coastal databases which provide an understanding of the prevailing wind-wave characteristics can aid in predicting coastal impacts.
Giuseppe Giugliano, Veronica Villani, Giuliana Barbato, Pasquale Schiano, Antonio D'Ambrosio, Piero Cau, Giuseppe Onorati, and Paola Mercogliano
EGUsphere, https://doi.org/10.5194/egusphere-2022-287, https://doi.org/10.5194/egusphere-2022-287, 2022
Preprint archived
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The present paper reports a detailed analysis of the observed and expected climate conditions over the Campania Region. Campania, as part of the Mediterranean area, is already testing relevant impacts related to climate change.
Katherine M. Smith, Skyler Kern, Peter E. Hamlington, Marco Zavatarelli, Nadia Pinardi, Emily F. Klee, and Kyle E. Niemeyer
Geosci. Model Dev., 14, 2419–2442, https://doi.org/10.5194/gmd-14-2419-2021, https://doi.org/10.5194/gmd-14-2419-2021, 2021
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We present a newly developed reduced-order biogeochemical flux model that is complex and flexible enough to capture open-ocean ecosystem dynamics but reduced enough to incorporate into highly resolved numerical simulations with limited additional computational cost. The model provides improved correlations between model output and field data, indicating that significant improvements in the reproduction of real-world data can be achieved with a small number of variables.
Ali Aydoğdu, Nadia Pinardi, Emin Özsoy, Gokhan Danabasoglu, Özgür Gürses, and Alicia Karspeck
Ocean Sci., 14, 999–1019, https://doi.org/10.5194/os-14-999-2018, https://doi.org/10.5194/os-14-999-2018, 2018
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A 6-year simulation of the Turkish Straits System is presented. The simulation is performed by a model using unstructured triangular mesh and realistic atmospheric forcing. The dynamics and circulation of the Marmara Sea are analysed and the mean state of the system is discussed on annual averages. Volume fluxes computed throughout the simulation are presented and the response of the model to severe storms is shown. Finally, it was possible to assess the kinetic energy budget in the Marmara Sea.
Ali Aydoğdu, Timothy J. Hoar, Tomislava Vukicevic, Jeffrey L. Anderson, Nadia Pinardi, Alicia Karspeck, Jonathan Hendricks, Nancy Collins, Francesca Macchia, and Emin Özsoy
Nonlin. Processes Geophys., 25, 537–551, https://doi.org/10.5194/npg-25-537-2018, https://doi.org/10.5194/npg-25-537-2018, 2018
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This study presents, to our knowledge, the first data assimilation experiments in the Sea of Marmara. We propose a FerryBox network for monitoring the state of the sea and show that assimilation of the temperature and salinity improves the forecasts in the basin. The flow of the Bosphorus helps to propagate the error reduction. The study can be taken as a step towards a marine forecasting system in the Sea of Marmara that will help to improve the forecasts in the adjacent Black and Aegean seas.
Giorgia Verri, Nadia Pinardi, David Gochis, Joseph Tribbia, Antonio Navarra, Giovanni Coppini, and Tomislava Vukicevic
Nat. Hazards Earth Syst. Sci., 17, 1741–1761, https://doi.org/10.5194/nhess-17-1741-2017, https://doi.org/10.5194/nhess-17-1741-2017, 2017
Giovanni Coppini, Palmalisa Marra, Rita Lecci, Nadia Pinardi, Sergio Cretì, Mario Scalas, Luca Tedesco, Alessandro D'Anca, Leopoldo Fazioli, Antonio Olita, Giuseppe Turrisi, Cosimo Palazzo, Giovanni Aloisio, Sandro Fiore, Antonio Bonaduce, Yogesh Vittal Kumkar, Stefania Angela Ciliberti, Ivan Federico, Gianandrea Mannarini, Paola Agostini, Roberto Bonarelli, Sara Martinelli, Giorgia Verri, Letizia Lusito, Davide Rollo, Arturo Cavallo, Antonio Tumolo, Tony Monacizzo, Marco Spagnulo, Rorberto Sorgente, Andrea Cucco, Giovanni Quattrocchi, Marina Tonani, Massimiliano Drudi, Paola Nassisi, Laura Conte, Laura Panzera, Antonio Navarra, and Giancarlo Negro
Nat. Hazards Earth Syst. Sci., 17, 533–547, https://doi.org/10.5194/nhess-17-533-2017, https://doi.org/10.5194/nhess-17-533-2017, 2017
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SeaConditions aims to support the users by providing the environmental information in due time and with adequate accuracy in the marine and coastal environments, enforcing users' sea situational awareness. SeaConditions consists of a web and mobile application for the provision of meteorological and oceanographic observation and forecasting products. The iOS/Android apps were downloaded by more than 105 000 users and more than 100 000 users have visited the web version (www.sea-conditions.com).
Alessandro D'Anca, Laura Conte, Paola Nassisi, Cosimo Palazzo, Rita Lecci, Sergio Cretì, Marco Mancini, Alessandra Nuzzo, Maria Mirto, Gianandrea Mannarini, Giovanni Coppini, Sandro Fiore, and Giovanni Aloisio
Nat. Hazards Earth Syst. Sci., 17, 171–184, https://doi.org/10.5194/nhess-17-171-2017, https://doi.org/10.5194/nhess-17-171-2017, 2017
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Updated situational sea awareness requires an advanced technological system to make data available for decision makers, improving the capacity of intervention and supporting users in managing emergency situations due to natural hazards. The TESSA data platform meets the request of near-real-time access to heterogeneous data with different accuracy, resolution or degrees of aggregation providing efficient and secure data access and strong support to operational oceanographic high-level services.
Ivan Federico, Nadia Pinardi, Giovanni Coppini, Paolo Oddo, Rita Lecci, and Michele Mossa
Nat. Hazards Earth Syst. Sci., 17, 45–59, https://doi.org/10.5194/nhess-17-45-2017, https://doi.org/10.5194/nhess-17-45-2017, 2017
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SANIFS (Southern Adriatic Northern Ionian coastal Forecasting System) is a coastal-ocean operational system based on the unstructured grid finite-element three-dimensional hydrodynamic SHYFEM model, which provides short-term forecasts. The operational chain is based on a downscaling approach starting from the large-scale system for the entire Mediterranean Basin (MFS, Mediterranean Forecasting System), which provides initial and boundary condition fields for the nested system.
Zhaoyi Wang, Andrea Storto, Nadia Pinardi, Guimei Liu, and Hui Wang
Nat. Hazards Earth Syst. Sci., 17, 17–30, https://doi.org/10.5194/nhess-17-17-2017, https://doi.org/10.5194/nhess-17-17-2017, 2017
Venkatramani Balaji, Eric Maisonnave, Niki Zadeh, Bryan N. Lawrence, Joachim Biercamp, Uwe Fladrich, Giovanni Aloisio, Rusty Benson, Arnaud Caubel, Jeffrey Durachta, Marie-Alice Foujols, Grenville Lister, Silvia Mocavero, Seth Underwood, and Garrett Wright
Geosci. Model Dev., 10, 19–34, https://doi.org/10.5194/gmd-10-19-2017, https://doi.org/10.5194/gmd-10-19-2017, 2017
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Climate models are among the most computationally expensive scientific applications in the world. We present a set of measures of computational performance that can be used to compare models that are independent of underlying hardware and the model formulation. They are easy to collect and reflect performance actually achieved in practice. We are preparing a systematic effort to collect these metrics for the world's climate models during CMIP6, the next Climate Model Intercomparison Project.
Giovanni Coppini, Eric Jansen, Giuseppe Turrisi, Sergio Creti, Elena Yurievna Shchekinova, Nadia Pinardi, Rita Lecci, Ivano Carluccio, Yogesh Vittal Kumkar, Alessandro D'Anca, Gianandrea Mannarini, Sara Martinelli, Palmalisa Marra, Tommaso Capodiferro, and Tommaso Gismondi
Nat. Hazards Earth Syst. Sci., 16, 2713–2727, https://doi.org/10.5194/nhess-16-2713-2016, https://doi.org/10.5194/nhess-16-2713-2016, 2016
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A new web-based and mobile Decision Support System (DSS) for Search-And-Rescue (SAR) at sea is presented, and its performance is evaluated using real case scenarios. The system, named OCEAN-SAR, is accessible via the website http://www.ocean-sar.com. OCEAN-SAR simulates drifting objects at sea, using as input ocean currents and wind. The performance of the service is evaluated by comparing simulations to data from the Italian Coast Guard pertaining to actual incidents in the Mediterranean Sea.
Nadia Pinardi, Vladyslav Lyubartsev, Nicola Cardellicchio, Claudio Caporale, Stefania Ciliberti, Giovanni Coppini, Francesca De Pascalis, Lorenzo Dialti, Ivan Federico, Marco Filippone, Alessandro Grandi, Matteo Guideri, Rita Lecci, Lamberto Lamberti, Giuliano Lorenzetti, Paolo Lusiani, Cosimo Damiano Macripo, Francesco Maicu, Michele Mossa, Diego Tartarini, Francesco Trotta, Georg Umgiesser, and Luca Zaggia
Nat. Hazards Earth Syst. Sci., 16, 2623–2639, https://doi.org/10.5194/nhess-16-2623-2016, https://doi.org/10.5194/nhess-16-2623-2016, 2016
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A multiscale sampling experiment was carried out in the Gulf of Taranto (eastern Mediterranean) providing the first synoptic evidence of the large-scale circulation structure and associated mesoscale variability. The circulation is shown to be dominated by an anticyclonic gyre and upwelling areas at the gyre periphery.
Maria Gabriella Gaeta, Achilleas G. Samaras, Ivan Federico, Renata Archetti, Francesco Maicu, and Giuliano Lorenzetti
Nat. Hazards Earth Syst. Sci., 16, 2071–2083, https://doi.org/10.5194/nhess-16-2071-2016, https://doi.org/10.5194/nhess-16-2071-2016, 2016
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The present work describes an operational strategy for the development of a multiscale modeling system, based on a multiple–nesting approach and open–source numerical models. The strategy was applied and validated for the Gulf of Taranto in southern Italy, scaling large–scale oceanographic model results to high–resolution coupled-wave 3-D hydrodynamics simulations for the area of Mar Grande in Taranto. The spatial and temporal high-resolution simulations were performed using the open source.
Emanuela Fiori, Marco Zavatarelli, Nadia Pinardi, Cristina Mazziotti, and Carla Rita Ferrari
Nat. Hazards Earth Syst. Sci., 16, 2043–2054, https://doi.org/10.5194/nhess-16-2043-2016, https://doi.org/10.5194/nhess-16-2043-2016, 2016
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This study shows the capability of the numerical model in reproducing the trophic index (TRIX) calculated from in situ data. The ecosystem simulations can represent an important support for monitoring activities, allowing the use of TRIX to be extended to larger areas where in situ sampling activities are difficult to implement. The model TRIX was calculated for the whole Adriatic Sea, showing trophic differences across the Adriatic Sea.
Svitlana Liubartseva, Giovanni Coppini, Nadia Pinardi, Michela De Dominicis, Rita Lecci, Giuseppe Turrisi, Sergio Cretì, Sara Martinelli, Paola Agostini, Palmalisa Marra, and Francesco Palermo
Nat. Hazards Earth Syst. Sci., 16, 2009–2020, https://doi.org/10.5194/nhess-16-2009-2016, https://doi.org/10.5194/nhess-16-2009-2016, 2016
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An innovative fully operational 24/7 web-based decision support system, WITOIL (Where Is The Oil), has been developed to support oil pollution response. The system meets the real-time requirements in terms of performance and dynamic service delivery. Comprehensive computational resources and network bandwidth efficiently support the multi-user regime. The eight-language graphical user interface incorporates a great variety of user services, e.g., help and support, tooltips, and video tutorials.
Jenny Pistoia, Nadia Pinardi, Paolo Oddo, Matthew Collins, Gerasimos Korres, and Yann Drillet
Nat. Hazards Earth Syst. Sci., 16, 1807–1819, https://doi.org/10.5194/nhess-16-1807-2016, https://doi.org/10.5194/nhess-16-1807-2016, 2016
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In this work we developed a new multi-model super-ensemble method to estimate sea surface temperature, an important product of ocean analysis systems. We find that ensemble size, quality, type of members and the training period length are all important elements of the MMSE methodology and require careful calibration. We show that with a rather limited but overconfident data set (with a low bias of the starting ensemble members) the RMSE analysis can be improved.
Gianandrea Mannarini, Giuseppe Turrisi, Alessandro D'Anca, Mario Scalas, Nadia Pinardi, Giovanni Coppini, Francesco Palermo, Ivano Carluccio, Matteo Scuro, Sergio Cretì, Rita Lecci, Paola Nassisi, and Luca Tedesco
Nat. Hazards Earth Syst. Sci., 16, 1791–1806, https://doi.org/10.5194/nhess-16-1791-2016, https://doi.org/10.5194/nhess-16-1791-2016, 2016
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Safety and efficiency of navigation can be enhanced through a better situational awareness at sea. We designed and realized an operational infrastructure for providing the navigators with optimal routes through various devices: PC, tablets, and smartphones. Sea-state and wind forecasts are used as inputs. Both motor- and sailboat routes are addressed by VISIR.
Eric Jansen, Giovanni Coppini, and Nadia Pinardi
Nat. Hazards Earth Syst. Sci., 16, 1623–1628, https://doi.org/10.5194/nhess-16-1623-2016, https://doi.org/10.5194/nhess-16-1623-2016, 2016
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In March 2014, a commercial airliner vanished without a trace. The main wreckage of the plane was never recovered, except for some small parts that washed up more than 17 months after the disappearance. In this paper we show a method to model the most likely trajectories of floating debris from the aircraft. The results show that the assumed area of the crash site is compatible with the recovered debris and predict that further debris may be found along the African east coast.
Jun She, Icarus Allen, Erik Buch, Alessandro Crise, Johnny A. Johannessen, Pierre-Yves Le Traon, Urmas Lips, Glenn Nolan, Nadia Pinardi, Jan H. Reißmann, John Siddorn, Emil Stanev, and Henning Wehde
Ocean Sci., 12, 953–976, https://doi.org/10.5194/os-12-953-2016, https://doi.org/10.5194/os-12-953-2016, 2016
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This white paper addresses key scientific challenges and research priorities for the development of operational oceanography in Europe for the next 5–10 years. Knowledge gaps and deficiencies are identified in relation to common scientific challenges in four EuroGOOS knowledge areas: European ocean observations, modelling and forecasting technology, coastal operational oceanography, and operational ecology.
Italo Epicoco, Silvia Mocavero, Francesca Macchia, Marcello Vichi, Tomas Lovato, Simona Masina, and Giovanni Aloisio
Geosci. Model Dev., 9, 2115–2128, https://doi.org/10.5194/gmd-9-2115-2016, https://doi.org/10.5194/gmd-9-2115-2016, 2016
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The present work aims at evaluating the scalability performance of a high-resolution global ocean biogeochemistry model (PELAGOS025) on massive parallel architectures and the benefits in terms of the time-to-solution reduction. The outcome of the analysis demonstrated that the lack of scalability is due to several factors such as the I/O operations, the memory contention, and the load unbalancing due to the memory structure of the biogeochemistry model component.
Gianandrea Mannarini, Nadia Pinardi, Giovanni Coppini, Paolo Oddo, and Alessandro Iafrati
Geosci. Model Dev., 9, 1597–1625, https://doi.org/10.5194/gmd-9-1597-2016, https://doi.org/10.5194/gmd-9-1597-2016, 2016
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VISIR is a new numerical model for the computation of optimal ship routes from meteo-marine forecasts. VISIR offers the scientific community an open platform whereby various ideas and methods for ship route optimization can be shared, tested, and compared to each other.
P. Oddo, A. Bonaduce, N. Pinardi, and A. Guarnieri
Geosci. Model Dev., 7, 3001–3015, https://doi.org/10.5194/gmd-7-3001-2014, https://doi.org/10.5194/gmd-7-3001-2014, 2014
A. Guarnieri, A. J. Souza, N. Pinardi, and P. Traykovski
Ocean Sci. Discuss., https://doi.org/10.5194/osd-11-1391-2014, https://doi.org/10.5194/osd-11-1391-2014, 2014
Revised manuscript not accepted
M. De Dominicis, N. Pinardi, G. Zodiatis, and R. Lardner
Geosci. Model Dev., 6, 1851–1869, https://doi.org/10.5194/gmd-6-1851-2013, https://doi.org/10.5194/gmd-6-1851-2013, 2013
M. De Dominicis, N. Pinardi, G. Zodiatis, and R. Archetti
Geosci. Model Dev., 6, 1871–1888, https://doi.org/10.5194/gmd-6-1871-2013, https://doi.org/10.5194/gmd-6-1871-2013, 2013
Related subject area
Oceanography
Wave forecast investigations on downscaling, source terms, and tides for Aotearoa New Zealand
Impacts of the CICE sea ice model and ERA atmosphere on an Antarctic MetROMS ocean model, MetROMS-UHel-v1.0
Comparing an idealized deterministic–stochastic model (SUP model, version 1) of the tide- and wind-driven sea surface currents in the Gulf of Trieste to high-frequency radar observations
PIBM 1.0: an individual-based model for simulating phytoplankton acclimation, diversity, and evolution in the ocean
An effective communication topology for performance optimization: a case study of the finite-volume wave modeling (FVWAM)
GREAT v1.0: Global Real-time Early Assessment of Tsunamis
Using automatic calibration to improve the physics behind complex numerical models: an example from a 3D lake model using Delft3D (v6.02.10) and DYNO-PODS (v1.0)
Improvements to the Met Office's global ocean–sea ice forecasting system including model and data assimilation changes
Resolution dependence of interlinked Southern Ocean biases in global coupled HadGEM3 models
PyESPERv1.01.01: A Python implementation of empirical seawater property estimation routines (ESPERs)
Modelling Microplastic Dynamics in Estuaries: A Comprehensive Review, Challenges and Recommendations
A new global high-resolution wave model for the tropical ocean using WAVEWATCH III version 7.14
DINO: A Diabatic Model of Pole-to-Pole Ocean Dynamics to Assess Subgrid Parameterizations across Horizontal Scales
sedInterFoam 1.0: a three-phase numerical model for sediment transport applications with free surfaces
Offline Fennel: A High-Performance and Computationally Efficient Biogeochemical Model within the Regional Ocean Modeling System (ROMS)
The Ross Sea and Amundsen Sea Ice–Sea Model (RAISE v1.0): a high-resolution ocean–sea ice–ice shelf coupling model for simulating the Dense Shelf Water and Antarctic Bottom Water in the Ross Sea, Antarctica
Sensitivity of the tropical Atlantic to vertical mixing in two ocean models (ICON-O v2.6.6 and FESOM v2.5)
CRITER 1.0: A coarse reconstruction with iterative refinement network for sparse spatio-temporal satellite data
HIDRA3: a deep-learning model for multipoint ensemble sea level forecasting in the presence of tide gauge sensor failures
A wave-resolving two-dimensional vertical Lagrangian approach to model microplastic transport in nearshore waters based on TrackMPD 3.0
HOTSSea v1: a NEMO-based physical Hindcast of the Salish Sea (1980–2018) supporting ecosystem model development
ISWFM-NSCS v2.0: advancing the internal solitary wave forecasting model with background currents and horizontally inhomogeneous stratifications
DalROMS-NWA12 v1.0, a coupled circulation–ice–biogeochemistry modelling system for the northwest Atlantic Ocean: development and validation
A revised ocean mixed layer model for better simulating the diurnal variation in ocean skin temperature
Evaluating an accelerated forcing approach for improving computational efficiency in coupled ice sheet–ocean modelling
An optimal transformation method for inferring ocean tracer sources and sinks
Data-driven rolling model for global wave height
PPCon 1.0: Biogeochemical-Argo profile prediction with 1D convolutional networks
Experimental design for the Marine Ice Sheet–Ocean Model Intercomparison Project – phase 2 (MISOMIP2)
Development of a total variation diminishing (TVD) sea ice transport scheme and its application in an ocean (SCHISM v5.11) and sea ice (Icepack v1.3.4) coupled model on unstructured grids
Spurious numerical mixing under strong tidal forcing: a case study in the south-east Asian seas using the Symphonie model (v3.1.2)
Modelling the water isotope distribution in the Mediterranean Sea using a high-resolution oceanic model (NEMO-MED12-watiso v1.0): evaluation of model results against in situ observations
LIGHT-bgcArgo-1.0: using synthetic float capabilities in E3SMv2 to assess spatiotemporal variability in ocean physics and biogeochemistry
Towards a real-time modeling of global ocean waves by the fully GPU-accelerated spectral wave model WAM6-GPU v1.0
A simple approach to represent precipitation-derived freshwater fluxes into nearshore ocean models: an FVCOM4.1 case study of Quatsino Sound, British Columbia
An optimal transformation method applied to diagnose the ocean carbon budget
Implementation and assessment of a model including mixotrophs and the carbonate cycle (Eco3M_MIX-CarbOx v1.0) in a highly dynamic Mediterranean coastal environment (Bay of Marseille, France) – Part 2: Towards a better representation of total alkalinity when modeling the carbonate system and air–sea CO2 fluxes
Development of a novel storm surge inundation model framework for efficient prediction
Skin sea surface temperature schemes in coupled ocean–atmosphere modelling: the impact of chlorophyll-interactive e-folding depth
DELWAVE 1.0: deep learning surrogate model of surface wave climate in the Adriatic Basin
StraitFlux – precise computations of water strait fluxes on various modeling grids
Comparison of the Coastal and Regional Ocean COmmunity model (CROCO) and NCAR-LES in non-hydrostatic simulations
Intercomparisons of Tracker v1.1 and four other ocean particle-tracking software packages in the Regional Ocean Modeling System
CAR36, a regional high-resolution ocean forecasting system for improving drift and beaching of Sargassum in the Caribbean archipelago
Implementation of additional spectral wave field exchanges in a three-dimensional wave–current coupled WAVEWATCH-III (version 6.07) and CROCO (version 1.2) configuration: assessment of their implications for macro-tidal coastal hydrodynamics
Comparison of 4-dimensional variational and ensemble optimal interpolation data assimilation systems using a Regional Ocean Modeling System (v3.4) configuration of the eddy-dominated East Australian Current system
LOCATE v1.0: numerical modelling of floating marine debris dispersion in coastal regions using Parcels v2.4.2
New insights into the South China Sea throughflow and water budget seasonal cycle: evaluation and analysis of a high-resolution configuration of the ocean model SYMPHONIE version 2.4
MQGeometry-1.0: a multi-layer quasi-geostrophic solver on non-rectangular geometries
Parameter estimation for ocean background vertical diffusivity coefficients in the Community Earth System Model (v1.2.1) and its impact on El Niño–Southern Oscillation forecasts
Rafael Santana, Richard Gorman, Emily Lane, Stuart Moore, Cyprien Bosserelle, Glen Reeve, and Christo Rautenbach
Geosci. Model Dev., 18, 4877–4898, https://doi.org/10.5194/gmd-18-4877-2025, https://doi.org/10.5194/gmd-18-4877-2025, 2025
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This research explores improving wave forecasts in Aotearoa New Zealand, particularly at Banks Peninsula and Baring Head. We used detailed models and found that forecasts at Baring Head improved significantly due to its narrow geography, but changes at Banks Peninsula were minimal. The study demonstrates that local conditions greatly influence the effectiveness of wave prediction models, highlighting the need for tailored approaches in coastal forecasting to enhance accuracy in the predictions.
Cecilia Äijälä, Yafei Nie, Lucía Gutiérrez-Loza, Chiara De Falco, Siv Kari Lauvset, Bin Cheng, David Anthony Bailey, and Petteri Uotila
Geosci. Model Dev., 18, 4823–4853, https://doi.org/10.5194/gmd-18-4823-2025, https://doi.org/10.5194/gmd-18-4823-2025, 2025
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The sea ice around Antarctica has experienced record lows in recent years. To understand these changes, models are needed. MetROMS-UHel is a new version of an ocean–sea ice model with updated sea ice code and the atmospheric data. We investigate the effect of our updates on different variables with a focus on sea ice and show an improved sea ice representation as compared with observations.
Sofia Flora, Laura Ursella, and Achim Wirth
Geosci. Model Dev., 18, 4685–4712, https://doi.org/10.5194/gmd-18-4685-2025, https://doi.org/10.5194/gmd-18-4685-2025, 2025
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We developed a hierarchy of idealized deterministic–stochastic models to simulate sea surface currents in the Gulf of Trieste. They include tide- and wind-driven sea surface current components, resolving the slowly varying part of the flow, and a stochastic signal, representing the fast-varying small-scale dynamics. The comparison with high-frequency radar observations shows that the non-Gaussian stochastic model captures key dynamics and mimics the observed fat-tailed probability distribution.
Iria Sala and Bingzhang Chen
Geosci. Model Dev., 18, 4155–4182, https://doi.org/10.5194/gmd-18-4155-2025, https://doi.org/10.5194/gmd-18-4155-2025, 2025
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Phytoplankton, tiny photosynthetic organisms, produce nearly half of Earth's oxygen. To analyze their physiology, diversity, and evolution in the ocean, we developed a model that treats phytoplankton as individual particles. Moreover, our model considers phytoplankton size, temperature, and light traits and allows for mutations in phytoplankton cells. Thus, our model provides a valuable tool for advancing the study of phytoplankton physiology, diversity, and evolution.
Renbo Pang, Fujiang Yu, Yuanyong Gao, Ye Yuan, Liang Yuan, and Zhiyi Gao
Geosci. Model Dev., 18, 4119–4136, https://doi.org/10.5194/gmd-18-4119-2025, https://doi.org/10.5194/gmd-18-4119-2025, 2025
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The application of distributed graph communication topology in Earth models has rarely been studied. We tested and compared this topology with the traditional point-to-point communication method using a wave model. We found that this topology with the Intel MPI (message-passing interface) library is more efficient. Additionally, using this topology can greatly improve the performance of the wave model and could help improve the performance of other Earth models.
Usama Kadri, Ali Abdolali, and Maxim Filimonov
Geosci. Model Dev., 18, 3487–3507, https://doi.org/10.5194/gmd-18-3487-2025, https://doi.org/10.5194/gmd-18-3487-2025, 2025
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The GREAT v1.0 software introduces a novel tsunami warning technology for global real-time analysis. It leverages acoustic signals generated by tsunamis, which propagate faster than the tsunami itself, enabling real-time detection and assessment. Integrating various models, the software provides reliable and rapid assessment, maps risk areas, and estimates tsunami amplitude. This advancement reduces false alarms and enhances global tsunami warning systems' accuracy and efficiency.
Marina Amadori, Abolfazl Irani Rahaghi, Damien Bouffard, and Marco Toffolon
Geosci. Model Dev., 18, 3473–3486, https://doi.org/10.5194/gmd-18-3473-2025, https://doi.org/10.5194/gmd-18-3473-2025, 2025
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Models simplify reality using assumptions, which can sometimes introduce flaws and affect their accuracy. Properly calibrating model parameters is essential, and although automated tools can speed up this process, they may occasionally produce incorrect values due to inconsistencies in the model. We demonstrate that by carefully applying automated tools, we were able to identify and correct a flaw in a widely used model for lake environments.
Davi Mignac, Jennifer Waters, Daniel J. Lea, Matthew J. Martin, James While, Anthony T. Weaver, Arthur Vidard, Catherine Guiavarc'h, Dave Storkey, David Ford, Edward W. Blockley, Jonathan Baker, Keith Haines, Martin R. Price, Michael J. Bell, and Richard Renshaw
Geosci. Model Dev., 18, 3405–3425, https://doi.org/10.5194/gmd-18-3405-2025, https://doi.org/10.5194/gmd-18-3405-2025, 2025
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We describe major improvements of the Met Office's global ocean–sea ice forecasting system. The models and the way observations are used to improve the forecasts were changed, which led to a significant error reduction of 1 d forecasts. The new system performance in past conditions, where subsurface observations are scarce, was improved with more consistent ocean heat content estimates. The new system will be of better use for climate studies and will provide improved forecasts for end users.
David Storkey, Pierre Mathiot, Michael J. Bell, Dan Copsey, Catherine Guiavarc'h, Helene T. Hewitt, Jeff Ridley, and Malcolm J. Roberts
Geosci. Model Dev., 18, 2725–2745, https://doi.org/10.5194/gmd-18-2725-2025, https://doi.org/10.5194/gmd-18-2725-2025, 2025
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The Southern Ocean is a key region of the world ocean in the context of climate change studies. We show that the Met Office Hadley Centre coupled model with intermediate ocean resolution struggles to accurately simulate the Southern Ocean. Increasing the frictional drag that the seafloor exerts on ocean currents and introducing a representation of unresolved ocean eddies both appear to reduce the large-scale biases in this model.
Larissa Marie Dias and Brendan Rae Carter
EGUsphere, https://doi.org/10.5194/egusphere-2025-458, https://doi.org/10.5194/egusphere-2025-458, 2025
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The increasing availability of oceanographic physical and chemical data necessitates accompanying methods for optimizing use of this data. This project produced algorithms (PyESPERs) for estimating biogeochemical seawater properties in Python, a freely available coding language. These algorithms were based on Empirical Seawater Property Estimation Routines (ESPERs), which were originally written in the proprietary MATLAB coding language and can be used in studies of marine carbonate chemistry.
Betty John Kaimathuruthy, Isabel Jalón-Rojas, and Damien Sous
EGUsphere, https://doi.org/10.5194/egusphere-2025-529, https://doi.org/10.5194/egusphere-2025-529, 2025
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Studies on plastic pollution have emerged as a rapidly growing field of research. Modelling microplastic transport in estuaries stems from their complex hydrodynamics and diverse particle behaviours affecting the dispersion and retention of microplastics. Our paper reviews key modelling approaches applied in estuaries analyzing their setups and parameterizations. We provide recommendations and future directions to improve the accuracy and modelling strategies for estuarine microplastic research.
Axelle Gaffet, Xavier Bertin, Damien Sous, Héloïse Michaud, Aron Roland, and Emmanuel Cordier
Geosci. Model Dev., 18, 1929–1946, https://doi.org/10.5194/gmd-18-1929-2025, https://doi.org/10.5194/gmd-18-1929-2025, 2025
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This study presents a new global wave model that improves predictions of sea states in tropical areas by using a high-resolution grid and corrected wind fields. The model is validated globally with satellite data and nearshore using in situ data. The model allows for the first time direct comparisons with in situ data collected at 10–30 m water depth, which is very close to shore due to the steep slope usually surrounding volcanic islands.
David Kamm, Julie Deshayes, and Gurvan Madec
EGUsphere, https://doi.org/10.5194/egusphere-2025-1100, https://doi.org/10.5194/egusphere-2025-1100, 2025
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We propose an idealized model of pole-to-pole ocean dynamics designed as a testbed for eddy parameterizations across a range of horizontal scales. While computationally affordable, it is able to capture key metrics of the climate system. By comparing simulations at low, intermediate and high horizontal resolution, we demonstrate its utility for evaluating eddy parameterizations, both in terms of their effect on the mean-state and by diagnosing the unresolved eddy fluxes they aim to represent.
Antoine Mathieu, Yeulwoo Kim, Tian-Jian Hsu, Cyrille Bonamy, and Julien Chauchat
Geosci. Model Dev., 18, 1561–1573, https://doi.org/10.5194/gmd-18-1561-2025, https://doi.org/10.5194/gmd-18-1561-2025, 2025
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Most of the tools available to model sediment transport do not account for complex physical mechanisms such as surface-wave-driven processes. In this study, a new model, sedInterFoam, allows us to reproduce numerically complex configurations in order to investigate coastal sediment transport applications dominated by surface waves and to gain insight into the complex physical processes associated with breaking waves and morphodynamics.
Júlia Crespin, Jordi Solé, and Miquel Canals
EGUsphere, https://doi.org/10.5194/egusphere-2025-865, https://doi.org/10.5194/egusphere-2025-865, 2025
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This study presents the Offline Fennel model, a tool designed to simulate ocean biogeochemical processes efficiently. By using existing hydrodynamic data, the model significantly reduces computation time from 6 hours to just 30 minutes. We tested its accuracy in the Northern Gulf of Mexico and found it closely matches physical-biogeochemical coupled simulations. This model allows researchers to conduct more tests and simulations without the need for extensive computational resources.
Zhaoru Zhang, Chuan Xie, Chuning Wang, Yuanjie Chen, Heng Hu, and Xiaoqiao Wang
Geosci. Model Dev., 18, 1375–1393, https://doi.org/10.5194/gmd-18-1375-2025, https://doi.org/10.5194/gmd-18-1375-2025, 2025
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A coupled fine-resolution ocean–ice model is developed for the Ross Sea and adjacent regions in Antarctica, a key area for the formation of global ocean bottom water, the Antarctic Bottom Water (AABW), which affects global ocean circulation. The model has a high skill level in simulating sea ice production driving the AABW source water formation and AABW properties when assessed against observations. A model experiment shows a significant impact of ice shelf melting on the AABW characteristics.
Swantje Bastin, Aleksei Koldunov, Florian Schütte, Oliver Gutjahr, Marta Agnieszka Mrozowska, Tim Fischer, Radomyra Shevchenko, Arjun Kumar, Nikolay Koldunov, Helmuth Haak, Nils Brüggemann, Rebecca Hummels, Mia Sophie Specht, Johann Jungclaus, Sergey Danilov, Marcus Dengler, and Markus Jochum
Geosci. Model Dev., 18, 1189–1220, https://doi.org/10.5194/gmd-18-1189-2025, https://doi.org/10.5194/gmd-18-1189-2025, 2025
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Vertical mixing is an important process, for example, for tropical sea surface temperature, but cannot be resolved by ocean models. Comparisons of mixing schemes and settings have usually been done with a single model, sometimes yielding conflicting results. We systematically compare two widely used schemes with different parameter settings in two different ocean models and show that most effects from mixing scheme parameter changes are model-dependent.
Matjaž Zupančič Muc, Vitjan Zavrtanik, Alexander Barth, Aida Alvera-Azcarate, Matjaž Ličer, and Matej Kristan
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-208, https://doi.org/10.5194/gmd-2024-208, 2025
Revised manuscript accepted for GMD
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Accurate sea surface temperature data (SST) is crucial for weather forecasting and climate modeling, but satellite observations are often incomplete. We developed a new method called CRITER, which uses machine learning to fill in the gaps in SST data. Our two-stage approach reconstructs large-scale patterns and refines details. Tested on Mediterranean, Adriatic, and Atlantic seas data, CRITER outperforms current methods, reducing errors by up to 44 %.
Marko Rus, Hrvoje Mihanović, Matjaž Ličer, and Matej Kristan
Geosci. Model Dev., 18, 605–620, https://doi.org/10.5194/gmd-18-605-2025, https://doi.org/10.5194/gmd-18-605-2025, 2025
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HIDRA3 is a deep-learning model for predicting sea levels and storm surges, offering significant improvements over previous models and numerical simulations. It utilizes data from multiple tide gauges, enhancing predictions even with limited historical data and during sensor outages. With its advanced architecture, HIDRA3 outperforms current state-of-the-art models by achieving a mean absolute error of up to 15 % lower, proving effective for coastal flood forecasting under diverse conditions.
Isabel Jalón-Rojas, Damien Sous, and Vincent Marieu
Geosci. Model Dev., 18, 319–336, https://doi.org/10.5194/gmd-18-319-2025, https://doi.org/10.5194/gmd-18-319-2025, 2025
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This study presents a novel modeling approach for understanding microplastic transport in coastal waters. The model accurately replicates experimental data and reveals key transport mechanisms. The findings enhance our knowledge of how microplastics move in nearshore environments, aiding in coastal management and efforts to combat plastic pollution globally.
Greig Oldford, Tereza Jarníková, Villy Christensen, and Michael Dunphy
Geosci. Model Dev., 18, 211–237, https://doi.org/10.5194/gmd-18-211-2025, https://doi.org/10.5194/gmd-18-211-2025, 2025
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We developed a 3D ocean model called the Hindcast of the Salish Sea (HOTSSea v1) that recreates physical conditions throughout the Salish Sea from 1980 to 2018. It was not clear that acceptable accuracy could be achieved because of computational and data limitations, but the model's predictions agreed well with observations. When we used the model to examine ocean temperature trends in areas that lack observations, it indicated that some seasons and areas are warming faster than others.
Yankun Gong, Xueen Chen, Jiexin Xu, Zhiwu Chen, Qingyou He, Ruixiang Zhao, Xiao-Hua Zhu, and Shuqun Cai
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-165, https://doi.org/10.5194/gmd-2024-165, 2024
Revised manuscript accepted for GMD
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A new internal solitary wave forecasting (ISW) model in the northern South China Sea (ISWFM-NSCS v2.0) improves ISW predictions by incorporating background currents and inhomogeneous stratifications. Additionally, viscosity and diffusivity coefficients are optimized to maintain stable stratifications, extending the forecasting period. Sensitivity experiments illustrate that ISWFM-NSCS v2.0 significantly enhances predictions of various wave properties.
Kyoko Ohashi, Arnaud Laurent, Christoph Renkl, Jinyu Sheng, Katja Fennel, and Eric Oliver
Geosci. Model Dev., 17, 8697–8733, https://doi.org/10.5194/gmd-17-8697-2024, https://doi.org/10.5194/gmd-17-8697-2024, 2024
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We developed a modelling system of the northwest Atlantic Ocean that simulates the currents, temperature, salinity, and parts of the biochemical cycle of the ocean, as well as sea ice. The system combines advanced, open-source models and can be used to study, for example, the ocean capture of atmospheric carbon dioxide, which is a key process in the global climate. The system produces realistic results, and we use it to investigate the roles of tides and sea ice in the northwest Atlantic Ocean.
Eui-Jong Kang, Byung-Ju Sohn, Sang-Woo Kim, Wonho Kim, Young-Cheol Kwon, Seung-Bum Kim, Hyoung-Wook Chun, and Chao Liu
Geosci. Model Dev., 17, 8553–8568, https://doi.org/10.5194/gmd-17-8553-2024, https://doi.org/10.5194/gmd-17-8553-2024, 2024
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Sea surface temperature (SST) is vital in climate, weather, and ocean sciences because it influences air–sea interactions. Errors in the ECMWF model's scheme for predicting ocean skin temperature prompted a revision of the ocean mixed layer model. Validation against infrared measurements and buoys showed a good correlation with minimal deviations. The revised model accurately simulates SST variations and aligns with solar radiation distributions, showing promise for weather and climate models.
Qin Zhou, Chen Zhao, Rupert Gladstone, Tore Hattermann, David Gwyther, and Benjamin Galton-Fenzi
Geosci. Model Dev., 17, 8243–8265, https://doi.org/10.5194/gmd-17-8243-2024, https://doi.org/10.5194/gmd-17-8243-2024, 2024
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We introduce an accelerated forcing approach to address timescale discrepancies between the ice sheets and ocean components in coupled modelling by reducing the ocean simulation duration. The approach is evaluated using idealized coupled models, and its limitations in real-world applications are discussed. Our results suggest it can be a valuable tool for process-oriented coupled ice sheet–ocean modelling and downscaling climate simulations with such models.
Jan D. Zika and Taimoor Sohail
Geosci. Model Dev., 17, 8049–8068, https://doi.org/10.5194/gmd-17-8049-2024, https://doi.org/10.5194/gmd-17-8049-2024, 2024
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We describe a method to relate fluxes of heat and freshwater at the sea surface to the resulting distribution of seawater among categories such as warm and salty or cold and salty. The method exploits the laws that govern how heat and salt change when water mixes. The method will allow the climate community to improve estimates of how much heat the ocean is absorbing and how rainfall and evaporation are changing across the globe.
Xinxin Wang, Jiuke Wang, Wenfang Lu, Changming Dong, Hao Qin, and Haoyu Jiang
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-181, https://doi.org/10.5194/gmd-2024-181, 2024
Revised manuscript accepted for GMD
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Large-scale wave modeling is essential for science and society, typically relying on resource-intensive numerical methods to simulate wave dynamics. In this study, we introduce a rolling AI-based method for modeling global significant wave height. Our model achieves accuracy comparable to traditional numerical methods while significantly improving speed, making it operable on standard laptops. This work demonstrates AI's potential to enhance the accuracy and efficiency of global wave modeling.
Gloria Pietropolli, Luca Manzoni, and Gianpiero Cossarini
Geosci. Model Dev., 17, 7347–7364, https://doi.org/10.5194/gmd-17-7347-2024, https://doi.org/10.5194/gmd-17-7347-2024, 2024
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Monitoring the ocean is essential for studying marine life and human impact. Our new software, PPCon, uses ocean data to predict key factors like nitrate and chlorophyll levels, which are hard to measure directly. By leveraging machine learning, PPCon offers more accurate and efficient predictions.
Jan De Rydt, Nicolas C. Jourdain, Yoshihiro Nakayama, Mathias van Caspel, Ralph Timmermann, Pierre Mathiot, Xylar S. Asay-Davis, Hélène Seroussi, Pierre Dutrieux, Ben Galton-Fenzi, David Holland, and Ronja Reese
Geosci. Model Dev., 17, 7105–7139, https://doi.org/10.5194/gmd-17-7105-2024, https://doi.org/10.5194/gmd-17-7105-2024, 2024
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Global climate models do not reliably simulate sea-level change due to ice-sheet–ocean interactions. We propose a community modelling effort to conduct a series of well-defined experiments to compare models with observations and study how models respond to a range of perturbations in climate and ice-sheet geometry. The second Marine Ice Sheet–Ocean Model Intercomparison Project will continue to lay the groundwork for including ice-sheet–ocean interactions in global-scale IPCC-class models.
Qian Wang, Yang Zhang, Fei Chai, Y. Joseph Zhang, and Lorenzo Zampieri
Geosci. Model Dev., 17, 7067–7081, https://doi.org/10.5194/gmd-17-7067-2024, https://doi.org/10.5194/gmd-17-7067-2024, 2024
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We coupled an unstructured hydro-model with an advanced column sea ice model to meet the growing demand for increased resolution and complexity in unstructured sea ice models. Additionally, we present a novel tracer transport scheme for the sea ice coupled model and demonstrate that this scheme fulfills the requirements for conservation, accuracy, efficiency, and monotonicity in an idealized test. Our new coupled model also has good performance in realistic tests.
Adrien Garinet, Marine Herrmann, Patrick Marsaleix, and Juliette Pénicaud
Geosci. Model Dev., 17, 6967–6986, https://doi.org/10.5194/gmd-17-6967-2024, https://doi.org/10.5194/gmd-17-6967-2024, 2024
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Mixing is a crucial aspect of the ocean, but its accurate representation in computer simulations is made challenging by errors that result in unwanted mixing, compromising simulation realism. Here we illustrate the spurious effect that tides can have on simulations of south-east Asia. Although they play an important role in determining the state of the ocean, they can increase numerical errors and make simulation outputs less realistic. We also provide insights into how to reduce these errors.
Mohamed Ayache, Jean-Claude Dutay, Anne Mouchet, Kazuyo Tachikawa, Camille Risi, and Gilles Ramstein
Geosci. Model Dev., 17, 6627–6655, https://doi.org/10.5194/gmd-17-6627-2024, https://doi.org/10.5194/gmd-17-6627-2024, 2024
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Water isotopes (δ18O, δD) are one of the most widely used proxies in ocean climate research. Previous studies using water isotope observations and modelling have highlighted the importance of understanding spatial and temporal isotopic variability for a quantitative interpretation of these tracers. Here we present the first results of a high-resolution regional dynamical model (at 1/12° horizontal resolution) developed for the Mediterranean Sea, one of the hotspots of ongoing climate change.
Cara Nissen, Nicole S. Lovenduski, Mathew Maltrud, Alison R. Gray, Yohei Takano, Kristen Falcinelli, Jade Sauvé, and Katherine Smith
Geosci. Model Dev., 17, 6415–6435, https://doi.org/10.5194/gmd-17-6415-2024, https://doi.org/10.5194/gmd-17-6415-2024, 2024
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Autonomous profiling floats have provided unprecedented observational coverage of the global ocean, but uncertainties remain about whether their sampling frequency and density capture the true spatiotemporal variability of physical, biogeochemical, and biological properties. Here, we present the novel synthetic biogeochemical float capabilities of the Energy Exascale Earth System Model version 2 and demonstrate their utility as a test bed to address these uncertainties.
Ye Yuan, Fujiang Yu, Zhi Chen, Xueding Li, Fang Hou, Yuanyong Gao, Zhiyi Gao, and Renbo Pang
Geosci. Model Dev., 17, 6123–6136, https://doi.org/10.5194/gmd-17-6123-2024, https://doi.org/10.5194/gmd-17-6123-2024, 2024
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Accurate and timely forecasting of ocean waves is of great importance to the safety of marine transportation and offshore engineering. In this study, GPU-accelerated computing is introduced in WAve Modeling Cycle 6 (WAM6). With this effort, global high-resolution wave simulations can now run on GPUs up to tens of times faster than the currently available models can on a CPU node with results that are just as accurate.
Krysten Rutherford, Laura Bianucci, and William Floyd
Geosci. Model Dev., 17, 6083–6104, https://doi.org/10.5194/gmd-17-6083-2024, https://doi.org/10.5194/gmd-17-6083-2024, 2024
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Nearshore ocean models often lack complete information about freshwater fluxes due to numerous ungauged rivers and streams. We tested a simple rain-based hydrological model as inputs into an ocean model of Quatsino Sound, Canada, with the aim of improving the representation of the land–ocean connection in the nearshore model. Through multiple tests, we found that the performance of the ocean model improved when providing 60 % or more of the freshwater inputs from the simple runoff model.
Neill Mackay, Taimoor Sohail, Jan David Zika, Richard G. Williams, Oliver Andrews, and Andrew James Watson
Geosci. Model Dev., 17, 5987–6005, https://doi.org/10.5194/gmd-17-5987-2024, https://doi.org/10.5194/gmd-17-5987-2024, 2024
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The ocean absorbs carbon dioxide from the atmosphere, mitigating climate change, but estimates of the uptake do not always agree. There is a need to reconcile these differing estimates and to improve our understanding of ocean carbon uptake. We present a new method for estimating ocean carbon uptake and test it with model data. The method effectively diagnoses the ocean carbon uptake from limited data and therefore shows promise for reconciling different observational estimates.
Lucille Barré, Frédéric Diaz, Thibaut Wagener, Camille Mazoyer, Christophe Yohia, and Christel Pinazo
Geosci. Model Dev., 17, 5851–5882, https://doi.org/10.5194/gmd-17-5851-2024, https://doi.org/10.5194/gmd-17-5851-2024, 2024
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The carbonate system is typically studied using measurements, but modeling can contribute valuable insights. Using a biogeochemical model, we propose a new representation of total alkalinity, dissolved inorganic carbon, pCO2, and pH in a highly dynamic Mediterranean coastal area, the Bay of Marseille, a useful addition to measurements. Through a detailed analysis of pCO2 and air–sea CO2 fluxes, we show that variations are strongly impacted by the hydrodynamic processes that affect the bay.
Xuanxuan Gao, Shuiqing Li, Dongxue Mo, Yahao Liu, and Po Hu
Geosci. Model Dev., 17, 5497–5509, https://doi.org/10.5194/gmd-17-5497-2024, https://doi.org/10.5194/gmd-17-5497-2024, 2024
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Storm surges generate coastal inundation and expose populations and properties to danger. We developed a novel storm surge inundation model for efficient prediction. Estimates compare well with in situ measurements and results from a numerical model. The new model is a significant improvement on existing numerical models, with much higher computational efficiency and stability, which allows timely disaster prevention and mitigation.
Vincenzo de Toma, Daniele Ciani, Yassmin Hesham Essa, Chunxue Yang, Vincenzo Artale, Andrea Pisano, Davide Cavaliere, Rosalia Santoleri, and Andrea Storto
Geosci. Model Dev., 17, 5145–5165, https://doi.org/10.5194/gmd-17-5145-2024, https://doi.org/10.5194/gmd-17-5145-2024, 2024
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This study explores methods to reconstruct diurnal variations in skin sea surface temperature in a model of the Mediterranean Sea. Our new approach, considering chlorophyll concentration, enhances spatial and temporal variations in the warm layer. Comparative analysis shows context-dependent improvements. The proposed "chlorophyll-interactive" method brings the surface net total heat flux closer to zero annually, despite a net heat loss from the ocean to the atmosphere.
Peter Mlakar, Antonio Ricchi, Sandro Carniel, Davide Bonaldo, and Matjaž Ličer
Geosci. Model Dev., 17, 4705–4725, https://doi.org/10.5194/gmd-17-4705-2024, https://doi.org/10.5194/gmd-17-4705-2024, 2024
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We propose a new point-prediction model, the DEep Learning WAVe Emulating model (DELWAVE), which successfully emulates the Simulating WAves Nearshore model (SWAN) over synoptic to climate timescales. Compared to control climatology over all wind directions, the mismatch between DELWAVE and SWAN is generally small compared to the difference between scenario and control conditions, suggesting that the noise introduced by surrogate modelling is substantially weaker than the climate change signal.
Susanna Winkelbauer, Michael Mayer, and Leopold Haimberger
Geosci. Model Dev., 17, 4603–4620, https://doi.org/10.5194/gmd-17-4603-2024, https://doi.org/10.5194/gmd-17-4603-2024, 2024
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Oceanic transports shape the global climate, but the evaluation and validation of this key quantity based on reanalysis and model data are complicated by the distortion of the used modelling grids and the large number of different grid types. We present two new methods that allow the calculation of oceanic fluxes of volume, heat, salinity, and ice through almost arbitrary sections for various models and reanalyses that are independent of the used modelling grids.
Xiaoyu Fan, Baylor Fox-Kemper, Nobuhiro Suzuki, Qing Li, Patrick Marchesiello, Peter P. Sullivan, and Paul S. Hall
Geosci. Model Dev., 17, 4095–4113, https://doi.org/10.5194/gmd-17-4095-2024, https://doi.org/10.5194/gmd-17-4095-2024, 2024
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Simulations of the oceanic turbulent boundary layer using the nonhydrostatic CROCO ROMS and NCAR-LES models are compared. CROCO and the NCAR-LES are accurate in a similar manner, but CROCO’s additional features (e.g., nesting and realism) and its compressible turbulence formulation carry additional costs.
Jilian Xiong and Parker MacCready
Geosci. Model Dev., 17, 3341–3356, https://doi.org/10.5194/gmd-17-3341-2024, https://doi.org/10.5194/gmd-17-3341-2024, 2024
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The new offline particle tracking package, Tracker v1.1, is introduced to the Regional Ocean Modeling System, featuring an efficient nearest-neighbor algorithm to enhance particle-tracking speed. Its performance was evaluated against four other tracking packages and passive dye. Despite unique features, all packages yield comparable results. Running multiple packages within the same circulation model allows comparison of their performance and ease of use.
Sylvain Cailleau, Laurent Bessières, Léonel Chiendje, Flavie Dubost, Guillaume Reffray, Jean-Michel Lellouche, Simon van Gennip, Charly Régnier, Marie Drevillon, Marc Tressol, Matthieu Clavier, Julien Temple-Boyer, and Léo Berline
Geosci. Model Dev., 17, 3157–3173, https://doi.org/10.5194/gmd-17-3157-2024, https://doi.org/10.5194/gmd-17-3157-2024, 2024
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In order to improve Sargassum drift forecasting in the Caribbean area, drift models can be forced by higher-resolution ocean currents. To this goal a 3 km resolution regional ocean model has been developed. Its assessment is presented with a particular focus on the reproduction of fine structures representing key features of the Caribbean region dynamics and Sargassum transport. The simulated propagation of a North Brazil Current eddy and its dissipation was found to be quite realistic.
Gaetano Porcile, Anne-Claire Bennis, Martial Boutet, Sophie Le Bot, Franck Dumas, and Swen Jullien
Geosci. Model Dev., 17, 2829–2853, https://doi.org/10.5194/gmd-17-2829-2024, https://doi.org/10.5194/gmd-17-2829-2024, 2024
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Here a new method of modelling the interaction between ocean currents and waves is presented. We developed an advanced coupling of two models, one for ocean currents and one for waves. In previous couplings, some wave-related calculations were based on simplified assumptions. Our method uses more complex calculations to better represent wave–current interactions. We tested it in a macro-tidal coastal area and found that it significantly improves the model accuracy, especially during storms.
Colette Gabrielle Kerry, Moninya Roughan, Shane Keating, David Gwyther, Gary Brassington, Adil Siripatana, and Joao Marcos A. C. Souza
Geosci. Model Dev., 17, 2359–2386, https://doi.org/10.5194/gmd-17-2359-2024, https://doi.org/10.5194/gmd-17-2359-2024, 2024
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Ocean forecasting relies on the combination of numerical models and ocean observations through data assimilation (DA). Here we assess the performance of two DA systems in a dynamic western boundary current, the East Australian Current, across a common modelling and observational framework. We show that the more advanced, time-dependent method outperforms the time-independent method for forecast horizons of 5 d. This advocates the use of advanced methods for highly variable oceanic regions.
Ivan Hernandez, Leidy M. Castro-Rosero, Manuel Espino, and Jose M. Alsina Torrent
Geosci. Model Dev., 17, 2221–2245, https://doi.org/10.5194/gmd-17-2221-2024, https://doi.org/10.5194/gmd-17-2221-2024, 2024
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The LOCATE numerical model was developed to conduct Lagrangian simulations of the transport and dispersion of marine debris at coastal scales. High-resolution hydrodynamic data and a beaching module that used particle distance to the shore for land–water boundary detection were used on a realistic debris discharge scenario comparing hydrodynamic data at various resolutions. Coastal processes and complex geometric structures were resolved when using nested grids and distance-to-shore beaching.
Ngoc B. Trinh, Marine Herrmann, Caroline Ulses, Patrick Marsaleix, Thomas Duhaut, Thai To Duy, Claude Estournel, and R. Kipp Shearman
Geosci. Model Dev., 17, 1831–1867, https://doi.org/10.5194/gmd-17-1831-2024, https://doi.org/10.5194/gmd-17-1831-2024, 2024
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A high-resolution model was built to study the South China Sea (SCS) water, heat, and salt budgets. Model performance is demonstrated by comparison with observations and simulations. Important discards are observed if calculating offline, instead of online, lateral inflows and outflows of water, heat, and salt. The SCS mainly receives water from the Luzon Strait and releases it through the Mindoro, Taiwan, and Karimata straits. SCS surface interocean water exchanges are driven by monsoon winds.
Louis Thiry, Long Li, Guillaume Roullet, and Etienne Mémin
Geosci. Model Dev., 17, 1749–1764, https://doi.org/10.5194/gmd-17-1749-2024, https://doi.org/10.5194/gmd-17-1749-2024, 2024
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We present a new way of solving the quasi-geostrophic (QG) equations, a simple set of equations describing ocean dynamics. Our method is solely based on the numerical methods used to solve the equations and requires no parameter tuning. Moreover, it can handle non-rectangular geometries, opening the way to study QG equations on realistic domains. We release a PyTorch implementation to ease future machine-learning developments on top of the presented method.
Zheqi Shen, Yihao Chen, Xiaojing Li, and Xunshu Song
Geosci. Model Dev., 17, 1651–1665, https://doi.org/10.5194/gmd-17-1651-2024, https://doi.org/10.5194/gmd-17-1651-2024, 2024
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Parameter estimation is the process that optimizes model parameters using observations, which could reduce model errors and improve forecasting. In this study, we conducted parameter estimation experiments using the CESM and the ensemble adjustment Kalman filter. The obtained initial conditions and parameters are used to perform ensemble forecast experiments for ENSO forecasting. The results revealed that parameter estimation could reduce analysis errors and improve ENSO forecast skills.
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Short summary
The full exploitation of supercomputing architectures requires a deep revision of the current climate models. This paper presents the parallelization of the three-dimensional hydrodynamic model SHYFEM (System of HydrodYnamic Finite Element Modules). Optimized numerical libraries were used to partition the model domain and solve the sparse linear system of equations in parallel. The performance assessment demonstrates a good level of scalability with a realistic configuration used as a benchmark.
The full exploitation of supercomputing architectures requires a deep revision of the current...
