Articles | Volume 13, issue 3
https://doi.org/10.5194/gmd-13-905-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-13-905-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Model description paper
| 
05 Mar 2020
Model description paper |
| 05 Mar 2020
| 05 Mar 2020
HETEROFOR 1.0: a spatially explicit model for exploring the response of structurally complex forests to uncertain future conditions – Part 1: Carbon fluxes and tree dimensional growth
Mathieu Jonard
CORRESPONDING AUTHOR
Earth and Life Institute, Université catholique de Louvain,
Louvain-la-Neuve, 1348, Belgium
Frédéric André
Earth and Life Institute, Université catholique de Louvain,
Louvain-la-Neuve, 1348, Belgium
François de Coligny
AMAP, Univ Montpellier, CIRAD, CNRS, INRAE, IRD, 34000 Montpellier,
France
Louis de Wergifosse
Earth and Life Institute, Université catholique de Louvain,
Louvain-la-Neuve, 1348, Belgium
Nicolas Beudez
AMAP, Univ Montpellier, CIRAD, CNRS, INRAE, IRD, 34000 Montpellier,
France
Hendrik Davi
Ecologie des Forêts Méditerranéennes (URFM), Institut National de la Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Avignon, 84914, France
Gauthier Ligot
Gembloux Agro-Bio Tech, Université de Liège, Gembloux, 5030, Belgium
Quentin Ponette
Earth and Life Institute, Université catholique de Louvain,
Louvain-la-Neuve, 1348, Belgium
Caroline Vincke
Earth and Life Institute, Université catholique de Louvain,
Louvain-la-Neuve, 1348, Belgium
Related authors
Arthur Guignabert, Quentin Ponette, Frédéric André, Christian Messier, Philippe Nolet, and Mathieu Jonard
Geosci. Model Dev., 16, 1661–1682, https://doi.org/10.5194/gmd-16-1661-2023, https://doi.org/10.5194/gmd-16-1661-2023, 2023
Short summary
Short summary
Spatially explicit and process-based models are useful to test innovative forestry practices under changing and uncertain conditions. However, their larger use is often limited by the restricted range of species and stand structures they can reliably account for. We therefore calibrated and evaluated such a model, HETEROFOR, for 23 species across southern Québec. Our results showed that the model is robust and can predict accurately both individual tree growth and stand dynamics in this region.
Jeanne Rezsöhazy, Hugues Goosse, Joël Guiot, Fabio Gennaretti, Etienne Boucher, Frédéric André, and Mathieu Jonard
Clim. Past, 16, 1043–1059, https://doi.org/10.5194/cp-16-1043-2020, https://doi.org/10.5194/cp-16-1043-2020, 2020
Short summary
Short summary
Tree rings are the main data source for climate reconstructions over the last millennium. Statistical tree-growth models have limitations that process-based models could overcome. Here, we investigate the possibility of using a process-based ecophysiological model (MAIDEN) as a complex proxy system model for palaeoclimate applications. We show its ability to simulate tree-growth index time series that can fit robustly tree-ring width observations under certain conditions.
Louis de Wergifosse, Frédéric André, Nicolas Beudez, François de Coligny, Hugues Goosse, François Jonard, Quentin Ponette, Hugues Titeux, Caroline Vincke, and Mathieu Jonard
Geosci. Model Dev., 13, 1459–1498, https://doi.org/10.5194/gmd-13-1459-2020, https://doi.org/10.5194/gmd-13-1459-2020, 2020
Short summary
Short summary
Given their key role in the simulation of climate impacts on tree growth, phenological and water balance processes must be integrated in models simulating forest dynamics under a changing environment. Here, we describe these processes integrated in HETEROFOR, a model accounting simultaneously for the functional, structural and spatial complexity to explore the forest response to forestry practices. The model evaluation using phenological and soil water content observations is quite promising.
Zhun Mao, Delphine Derrien, Markus Didion, Jari Liski, Thomas Eglin, Manuel Nicolas, Mathieu Jonard, and Laurent Saint-André
Biogeosciences, 16, 1955–1973, https://doi.org/10.5194/bg-16-1955-2019, https://doi.org/10.5194/bg-16-1955-2019, 2019
Short summary
Short summary
In a context of global changes, modeling and predicting the dynamics of soil carbon stocks in forest ecosystems are vital but challenging. Yasso07 is considered to be one of the most promising models for such a purpose. We examine the accuracy of its prediction of soil carbon dynamics over the whole French metropolitan territory at a decennial timescale. We revealed how the bottleneck in soil carbon modeling is linked with the lack of knowledge on soil carbon quality and fine-root litter.
Marta Camino-Serrano, Elisabeth Graf Pannatier, Sara Vicca, Sebastiaan Luyssaert, Mathieu Jonard, Philippe Ciais, Bertrand Guenet, Bert Gielen, Josep Peñuelas, Jordi Sardans, Peter Waldner, Sophia Etzold, Guia Cecchini, Nicholas Clarke, Zoran Galić, Laure Gandois, Karin Hansen, Jim Johnson, Uwe Klinck, Zora Lachmanová, Antti-Jussi Lindroos, Henning Meesenburg, Tiina M. Nieminen, Tanja G. M. Sanders, Kasia Sawicka, Walter Seidling, Anne Thimonier, Elena Vanguelova, Arne Verstraeten, Lars Vesterdal, and Ivan A. Janssens
Biogeosciences, 13, 5567–5585, https://doi.org/10.5194/bg-13-5567-2016, https://doi.org/10.5194/bg-13-5567-2016, 2016
Short summary
Short summary
We investigated the long-term trends of dissolved organic carbon (DOC) in soil solution and the drivers of changes in over 100 forest monitoring plots across Europe. An overall increasing trend was detected in the organic layers, but no overall trend was found in the mineral horizons. There are strong interactions between controls acting at local and regional scales. Our findings are relevant for researchers focusing on the link between terrestrial and aquatic ecosystems and for C-cycle models.
Jacob A. Nelson, Sophia Walther, Fabian Gans, Basil Kraft, Ulrich Weber, Kimberly Novick, Nina Buchmann, Mirco Migliavacca, Georg Wohlfahrt, Ladislav Šigut, Andreas Ibrom, Dario Papale, Mathias Göckede, Gregory Duveiller, Alexander Knohl, Lukas Hörtnagl, Russell L. Scott, Weijie Zhang, Zayd Mahmoud Hamdi, Markus Reichstein, Sergio Aranda-Barranco, Jonas Ardö, Maarten Op de Beeck, Dave Billdesbach, David Bowling, Rosvel Bracho, Christian Brümmer, Gustau Camps-Valls, Shiping Chen, Jamie Rose Cleverly, Ankur Desai, Gang Dong, Tarek S. El-Madany, Eugenie Susanne Euskirchen, Iris Feigenwinter, Marta Galvagno, Giacomo Gerosa, Bert Gielen, Ignacio Goded, Sarah Goslee, Christopher Michael Gough, Bernard Heinesch, Kazuhito Ichii, Marcin Antoni Jackowicz-Korczynski, Anne Klosterhalfen, Sara Knox, Hideki Kobayashi, Kukka-Maaria Kohonen, Mika Korkiakoski, Ivan Mammarella, Gharun Mana, Riccardo Marzuoli, Roser Matamala, Stefan Metzger, Leonardo Montagnani, Giacomo Nicolini, Thomas O'Halloran, Jean-Marc Ourcival, Matthias Peichl, Elise Pendall, Borja Ruiz Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, Marius Schmidt, Christopher R. Schwalm, Ankit Shekhar, Richard Silberstein, Maria Lucia Silveira, Donatella Spano, Torbern Tagesson, Gianluca Tramontana, Carlo Trotta, Fabio Turco, Timo Vesala, Caroline Vincke, Domenico Vitale, Enrique R. Vivoni, Yi Wang, William Woodgate, Enrico A. Yepez, Junhui Zhang, Donatella Zona, and Martin Jung
EGUsphere, https://doi.org/10.5194/egusphere-2024-165, https://doi.org/10.5194/egusphere-2024-165, 2024
Short summary
Short summary
The movement of water, carbon, and energy from the earth surface to the atmosphere, or flux, is an important process to understand that impacts all of our lives. Here we outline a method to estimate global water and CO2 fluxes based on direct measurements from site around the world called FLUXCOM-X. We go on to demonstrate how these new estimates of net CO2 uptake/loss, gross CO2 uptake, total water evaporation, and transpiration from plants compare to previous and independent estimates.
Arthur Guignabert, Quentin Ponette, Frédéric André, Christian Messier, Philippe Nolet, and Mathieu Jonard
Geosci. Model Dev., 16, 1661–1682, https://doi.org/10.5194/gmd-16-1661-2023, https://doi.org/10.5194/gmd-16-1661-2023, 2023
Short summary
Short summary
Spatially explicit and process-based models are useful to test innovative forestry practices under changing and uncertain conditions. However, their larger use is often limited by the restricted range of species and stand structures they can reliably account for. We therefore calibrated and evaluated such a model, HETEROFOR, for 23 species across southern Québec. Our results showed that the model is robust and can predict accurately both individual tree growth and stand dynamics in this region.
Jan Pisek, Angela Erb, Lauri Korhonen, Tobias Biermann, Arnaud Carrara, Edoardo Cremonese, Matthias Cuntz, Silvano Fares, Giacomo Gerosa, Thomas Grünwald, Niklas Hase, Michal Heliasz, Andreas Ibrom, Alexander Knohl, Johannes Kobler, Bart Kruijt, Holger Lange, Leena Leppänen, Jean-Marc Limousin, Francisco Ramon Lopez Serrano, Denis Loustau, Petr Lukeš, Lars Lundin, Riccardo Marzuoli, Meelis Mölder, Leonardo Montagnani, Johan Neirynck, Matthias Peichl, Corinna Rebmann, Eva Rubio, Margarida Santos-Reis, Crystal Schaaf, Marius Schmidt, Guillaume Simioni, Kamel Soudani, and Caroline Vincke
Biogeosciences, 18, 621–635, https://doi.org/10.5194/bg-18-621-2021, https://doi.org/10.5194/bg-18-621-2021, 2021
Short summary
Short summary
Understory vegetation is the most diverse, least understood component of forests worldwide. Understory communities are important drivers of overstory succession and nutrient cycling. Multi-angle remote sensing enables us to describe surface properties by means that are not possible when using mono-angle data. Evaluated over an extensive set of forest ecosystem experimental sites in Europe, our reported method can deliver good retrievals, especially over different forest types with open canopies.
Jeanne Rezsöhazy, Hugues Goosse, Joël Guiot, Fabio Gennaretti, Etienne Boucher, Frédéric André, and Mathieu Jonard
Clim. Past, 16, 1043–1059, https://doi.org/10.5194/cp-16-1043-2020, https://doi.org/10.5194/cp-16-1043-2020, 2020
Short summary
Short summary
Tree rings are the main data source for climate reconstructions over the last millennium. Statistical tree-growth models have limitations that process-based models could overcome. Here, we investigate the possibility of using a process-based ecophysiological model (MAIDEN) as a complex proxy system model for palaeoclimate applications. We show its ability to simulate tree-growth index time series that can fit robustly tree-ring width observations under certain conditions.
Chris R. Flechard, Andreas Ibrom, Ute M. Skiba, Wim de Vries, Marcel van Oijen, David R. Cameron, Nancy B. Dise, Janne F. J. Korhonen, Nina Buchmann, Arnaud Legout, David Simpson, Maria J. Sanz, Marc Aubinet, Denis Loustau, Leonardo Montagnani, Johan Neirynck, Ivan A. Janssens, Mari Pihlatie, Ralf Kiese, Jan Siemens, André-Jean Francez, Jürgen Augustin, Andrej Varlagin, Janusz Olejnik, Radosław Juszczak, Mika Aurela, Daniel Berveiller, Bogdan H. Chojnicki, Ulrich Dämmgen, Nicolas Delpierre, Vesna Djuricic, Julia Drewer, Eric Dufrêne, Werner Eugster, Yannick Fauvel, David Fowler, Arnoud Frumau, André Granier, Patrick Gross, Yannick Hamon, Carole Helfter, Arjan Hensen, László Horváth, Barbara Kitzler, Bart Kruijt, Werner L. Kutsch, Raquel Lobo-do-Vale, Annalea Lohila, Bernard Longdoz, Michal V. Marek, Giorgio Matteucci, Marta Mitosinkova, Virginie Moreaux, Albrecht Neftel, Jean-Marc Ourcival, Kim Pilegaard, Gabriel Pita, Francisco Sanz, Jan K. Schjoerring, Maria-Teresa Sebastià, Y. Sim Tang, Hilde Uggerud, Marek Urbaniak, Netty van Dijk, Timo Vesala, Sonja Vidic, Caroline Vincke, Tamás Weidinger, Sophie Zechmeister-Boltenstern, Klaus Butterbach-Bahl, Eiko Nemitz, and Mark A. Sutton
Biogeosciences, 17, 1583–1620, https://doi.org/10.5194/bg-17-1583-2020, https://doi.org/10.5194/bg-17-1583-2020, 2020
Short summary
Short summary
Experimental evidence from a network of 40 monitoring sites in Europe suggests that atmospheric nitrogen deposition to forests and other semi-natural vegetation impacts the carbon sequestration rates in ecosystems, as well as the net greenhouse gas balance including other greenhouse gases such as nitrous oxide and methane. Excess nitrogen deposition in polluted areas also leads to other environmental impacts such as nitrogen leaching to groundwater and other pollutant gaseous emissions.
Chris R. Flechard, Marcel van Oijen, David R. Cameron, Wim de Vries, Andreas Ibrom, Nina Buchmann, Nancy B. Dise, Ivan A. Janssens, Johan Neirynck, Leonardo Montagnani, Andrej Varlagin, Denis Loustau, Arnaud Legout, Klaudia Ziemblińska, Marc Aubinet, Mika Aurela, Bogdan H. Chojnicki, Julia Drewer, Werner Eugster, André-Jean Francez, Radosław Juszczak, Barbara Kitzler, Werner L. Kutsch, Annalea Lohila, Bernard Longdoz, Giorgio Matteucci, Virginie Moreaux, Albrecht Neftel, Janusz Olejnik, Maria J. Sanz, Jan Siemens, Timo Vesala, Caroline Vincke, Eiko Nemitz, Sophie Zechmeister-Boltenstern, Klaus Butterbach-Bahl, Ute M. Skiba, and Mark A. Sutton
Biogeosciences, 17, 1621–1654, https://doi.org/10.5194/bg-17-1621-2020, https://doi.org/10.5194/bg-17-1621-2020, 2020
Short summary
Short summary
Nitrogen deposition from the atmosphere to unfertilized terrestrial vegetation such as forests can increase carbon dioxide uptake and favour carbon sequestration by ecosystems. However the data from observational networks are difficult to interpret in terms of a carbon-to-nitrogen response, because there are a number of other confounding factors, such as climate, soil physical properties and fertility, and forest age. We propose a model-based method to untangle the different influences.
Louis de Wergifosse, Frédéric André, Nicolas Beudez, François de Coligny, Hugues Goosse, François Jonard, Quentin Ponette, Hugues Titeux, Caroline Vincke, and Mathieu Jonard
Geosci. Model Dev., 13, 1459–1498, https://doi.org/10.5194/gmd-13-1459-2020, https://doi.org/10.5194/gmd-13-1459-2020, 2020
Short summary
Short summary
Given their key role in the simulation of climate impacts on tree growth, phenological and water balance processes must be integrated in models simulating forest dynamics under a changing environment. Here, we describe these processes integrated in HETEROFOR, a model accounting simultaneously for the functional, structural and spatial complexity to explore the forest response to forestry practices. The model evaluation using phenological and soil water content observations is quite promising.
Zhun Mao, Delphine Derrien, Markus Didion, Jari Liski, Thomas Eglin, Manuel Nicolas, Mathieu Jonard, and Laurent Saint-André
Biogeosciences, 16, 1955–1973, https://doi.org/10.5194/bg-16-1955-2019, https://doi.org/10.5194/bg-16-1955-2019, 2019
Short summary
Short summary
In a context of global changes, modeling and predicting the dynamics of soil carbon stocks in forest ecosystems are vital but challenging. Yasso07 is considered to be one of the most promising models for such a purpose. We examine the accuracy of its prediction of soil carbon dynamics over the whole French metropolitan territory at a decennial timescale. We revealed how the bottleneck in soil carbon modeling is linked with the lack of knowledge on soil carbon quality and fine-root litter.
Marta Camino-Serrano, Elisabeth Graf Pannatier, Sara Vicca, Sebastiaan Luyssaert, Mathieu Jonard, Philippe Ciais, Bertrand Guenet, Bert Gielen, Josep Peñuelas, Jordi Sardans, Peter Waldner, Sophia Etzold, Guia Cecchini, Nicholas Clarke, Zoran Galić, Laure Gandois, Karin Hansen, Jim Johnson, Uwe Klinck, Zora Lachmanová, Antti-Jussi Lindroos, Henning Meesenburg, Tiina M. Nieminen, Tanja G. M. Sanders, Kasia Sawicka, Walter Seidling, Anne Thimonier, Elena Vanguelova, Arne Verstraeten, Lars Vesterdal, and Ivan A. Janssens
Biogeosciences, 13, 5567–5585, https://doi.org/10.5194/bg-13-5567-2016, https://doi.org/10.5194/bg-13-5567-2016, 2016
Short summary
Short summary
We investigated the long-term trends of dissolved organic carbon (DOC) in soil solution and the drivers of changes in over 100 forest monitoring plots across Europe. An overall increasing trend was detected in the organic layers, but no overall trend was found in the mineral horizons. There are strong interactions between controls acting at local and regional scales. Our findings are relevant for researchers focusing on the link between terrestrial and aquatic ecosystems and for C-cycle models.
Related subject area
Climate and Earth system modeling
HyPhAICC v1.0: a hybrid physics–AI approach for probability fields advection shown through an application to cloud cover nowcasting
CICERO Simple Climate Model (CICERO-SCM v1.1.1) – an improved simple climate model with a parameter calibration tool
Development of a plant carbon–nitrogen interface coupling framework in a coupled biophysical-ecosystem–biogeochemical model (SSiB5/TRIFFID/DayCent-SOM v1.0)
Dynamical Madden–Julian Oscillation forecasts using an ensemble subseasonal-to-seasonal forecast system of the IAP-CAS model
Implementation of a brittle sea ice rheology in an Eulerian, finite-difference, C-grid modeling framework: impact on the simulated deformation of sea ice in the Arctic
HSW-V v1.0: localized injections of interactive volcanic aerosols and their climate impacts in a simple general circulation model
A 3D-Var assimilation scheme for vertical velocity with CMA-MESO v5.0
Updating the radiation infrastructure in MESSy (based on MESSy version 2.55)
An urban module coupled with the Variable Infiltration Capacity model to improve hydrothermal simulations in urban systems
Bayesian hierarchical model for bias-correcting climate models
Evaluation of the coupling of EMACv2.55 to the land surface and vegetation model JSBACHv4
Reduced floating-point precision in regional climate simulations: an ensemble-based statistical verification
TorchClim v1.0: a deep-learning plugin for climate model physics
Linking global terrestrial and ocean biogeochemistry with process-based, coupled freshwater algae–nutrient–solid dynamics in LM3-FANSY v1.0
Validating a microphysical prognostic stratospheric aerosol implementation in E3SMv2 using observations after the Mount Pinatubo eruption
Implementing detailed nucleation predictions in the Earth system model EC-Earth3.3.4: sulfuric acid–ammonia nucleation
Modeling biochar effects on soil organic carbon on croplands in a microbial decomposition model (MIMICS-BC_v1.0)
Hector V3.2.0: functionality and performance of a reduced-complexity climate model
Evaluation of CMIP6 model simulations of PM2.5 and its components over China
Assessment of a tiling energy budget approach in a land surface model, ORCHIDEE-MICT (r8205)
Multivariate adjustment of drizzle bias using machine learning in European climate projections
Development and evaluation of the interactive Model for Air Pollution and Land Ecosystems (iMAPLE) version 1.0
A perspective on the next generation of Earth system model scenarios: towards representative emission pathways (REPs)
Parallel SnowModel (v1.0): a parallel implementation of a distributed snow-evolution modeling system (SnowModel)
LB-SCAM: a learning-based method for efficient large-scale sensitivity analysis and tuning of the Single Column Atmosphere Model (SCAM)
Quantifying the impact of SST feedback frequency on Madden–Julian oscillation simulations
Systematic and objective evaluation of Earth system models: PCMDI Metrics Package (PMP) version 3
A revised model of global silicate weathering considering the influence of vegetation cover on erosion rate
A radiative–convective model computing precipitation with the maximum entropy production hypothesis
Introducing the MESMER-M-TPv0.1.0 module: Spatially Explicit Earth System Model Emulation for Monthly Precipitation and Temperature
Leveraging regional mesh refinement to simulate future climate projections for California using the Simplified Convection-Permitting E3SM Atmosphere Model Version 0
Machine learning parameterization of the multi-scale Kain–Fritsch (MSKF) convection scheme and stable simulation coupled in the Weather Research and Forecasting (WRF) model using WRF–ML v1.0
Impacts of spatial heterogeneity of anthropogenic aerosol emissions in a regionally refined global aerosol–climate model
cfr (v2024.1.26): a Python package for climate field reconstruction
NEWTS1.0: Numerical model of coastal Erosion by Waves and Transgressive Scarps
Evaluation of isoprene emissions from the coupled model SURFEX–MEGANv2.1
A comprehensive Earth system model (AWI-ESM2.1) with interactive icebergs: effects on surface and deep-ocean characteristics
The regional climate–chemistry–ecology coupling model RegCM-Chem (v4.6)–YIBs (v1.0): development and application
Coupling the regional climate model ICON-CLM v2.6.6 into the Earth system model GCOAST-AHOI v2.0 using OASIS3-MCT v4.0
An overview of cloud–radiation denial experiments for the Energy Exascale Earth System Model version 1
The computational and energy cost of simulation and storage for climate science: lessons from CMIP6
Subgrid-scale variability of cloud ice in the ICON-AES 1.3.00
INFERNO-peat v1.0.0: a representation of northern high-latitude peat fires in the JULES-INFERNO global fire model
The 4DEnVar-based weakly coupled land data assimilation system for E3SM version 2
Continental-scale bias-corrected climate and hydrological projections for Australia
G6-1.5K-SAI: a new Geoengineering Model Intercomparison Project (GeoMIP) experiment integrating recent advances in solar radiation modification studies
Bridging the gap: a new module for human water use in the Community Earth System Model version 2.2.1
Modeling the effects of tropospheric ozone on the growth and yield of global staple crops with DSSAT v4.8.0
A one-dimensional urban flow model with an eddy-diffusivity mass-flux (EDMF) scheme and refined turbulent transport (MLUCM v3.0)
DCMIP2016: the tropical cyclone test case
Rachid El Montassir, Olivier Pannekoucke, and Corentin Lapeyre
Geosci. Model Dev., 17, 6657–6681, https://doi.org/10.5194/gmd-17-6657-2024, https://doi.org/10.5194/gmd-17-6657-2024, 2024
Short summary
Short summary
This study introduces a novel approach that combines physics and artificial intelligence (AI) for improved cloud cover forecasting. This approach outperforms traditional deep learning (DL) methods in producing realistic and physically consistent results while requiring less training data. This architecture provides a promising solution to overcome the limitations of classical AI methods and contributes to open up new possibilities for combining physical knowledge with deep learning models.
Marit Sandstad, Borgar Aamaas, Ane Nordlie Johansen, Marianne Tronstad Lund, Glen Philip Peters, Bjørn Hallvard Samset, Benjamin Mark Sanderson, and Ragnhild Bieltvedt Skeie
Geosci. Model Dev., 17, 6589–6625, https://doi.org/10.5194/gmd-17-6589-2024, https://doi.org/10.5194/gmd-17-6589-2024, 2024
Short summary
Short summary
The CICERO-SCM has existed as a Fortran model since 1999 that calculates the radiative forcing and concentrations from emissions and is an upwelling diffusion energy balance model of the ocean that calculates temperature change. In this paper, we describe an updated version ported to Python and publicly available at https://github.com/ciceroOslo/ciceroscm (https://doi.org/10.5281/zenodo.10548720). This version contains functionality for parallel runs and automatic calibration.
Zheng Xiang, Yongkang Xue, Weidong Guo, Melannie D. Hartman, Ye Liu, and William J. Parton
Geosci. Model Dev., 17, 6437–6464, https://doi.org/10.5194/gmd-17-6437-2024, https://doi.org/10.5194/gmd-17-6437-2024, 2024
Short summary
Short summary
A process-based plant carbon (C)–nitrogen (N) interface coupling framework has been developed which mainly focuses on plant resistance and N-limitation effects on photosynthesis, plant respiration, and plant phenology. A dynamic C / N ratio is introduced to represent plant resistance and self-adjustment. The framework has been implemented in a coupled biophysical-ecosystem–biogeochemical model, and testing results show a general improvement in simulating plant properties with this framework.
Yangke Liu, Qing Bao, Bian He, Xiaofei Wu, Jing Yang, Yimin Liu, Guoxiong Wu, Tao Zhu, Siyuan Zhou, Yao Tang, Ankang Qu, Yalan Fan, Anling Liu, Dandan Chen, Zhaoming Luo, Xing Hu, and Tongwen Wu
Geosci. Model Dev., 17, 6249–6275, https://doi.org/10.5194/gmd-17-6249-2024, https://doi.org/10.5194/gmd-17-6249-2024, 2024
Short summary
Short summary
We give an overview of the Institute of Atmospheric Physics–Chinese Academy of Sciences subseasonal-to-seasonal ensemble forecasting system and Madden–Julian Oscillation forecast evaluation of the system. Compared to other S2S models, the IAP-CAS model has its benefits but also biases, i.e., underdispersive ensemble, overestimated amplitude, and faster propagation speed when forecasting MJO. We provide a reason for these biases and prospects for further improvement of this system in the future.
Laurent Brodeau, Pierre Rampal, Einar Ólason, and Véronique Dansereau
Geosci. Model Dev., 17, 6051–6082, https://doi.org/10.5194/gmd-17-6051-2024, https://doi.org/10.5194/gmd-17-6051-2024, 2024
Short summary
Short summary
A new brittle sea ice rheology, BBM, has been implemented into the sea ice component of NEMO. We describe how a new spatial discretization framework was introduced to achieve this. A set of idealized and realistic ocean and sea ice simulations of the Arctic have been performed using BBM and the standard viscous–plastic rheology of NEMO. When compared to satellite data, our simulations show that our implementation of BBM leads to a fairly good representation of sea ice deformations.
Joseph P. Hollowed, Christiane Jablonowski, Hunter Y. Brown, Benjamin R. Hillman, Diana L. Bull, and Joseph L. Hart
Geosci. Model Dev., 17, 5913–5938, https://doi.org/10.5194/gmd-17-5913-2024, https://doi.org/10.5194/gmd-17-5913-2024, 2024
Short summary
Short summary
Large volcanic eruptions deposit material in the upper atmosphere, which is capable of altering temperature and wind patterns of Earth's atmosphere for subsequent years. This research describes a new method of simulating these effects in an idealized, efficient atmospheric model. A volcanic eruption of sulfur dioxide is described with a simplified set of physical rules, which eventually cools the planetary surface. This model has been designed as a test bed for climate attribution studies.
Hong Li, Yi Yang, Jian Sun, Yuan Jiang, Ruhui Gan, and Qian Xie
Geosci. Model Dev., 17, 5883–5896, https://doi.org/10.5194/gmd-17-5883-2024, https://doi.org/10.5194/gmd-17-5883-2024, 2024
Short summary
Short summary
Vertical atmospheric motions play a vital role in convective-scale precipitation forecasts by connecting atmospheric dynamics with cloud development. A three-dimensional variational vertical velocity assimilation scheme is developed within the high-resolution CMA-MESO model, utilizing the adiabatic Richardson equation as the observation operator. A 10 d continuous run and an individual case study demonstrate improved forecasts, confirming the scheme's effectiveness.
Matthias Nützel, Laura Stecher, Patrick Jöckel, Franziska Winterstein, Martin Dameris, Michael Ponater, Phoebe Graf, and Markus Kunze
Geosci. Model Dev., 17, 5821–5849, https://doi.org/10.5194/gmd-17-5821-2024, https://doi.org/10.5194/gmd-17-5821-2024, 2024
Short summary
Short summary
We extended the infrastructure of our modelling system to enable the use of an additional radiation scheme. After calibrating the model setups to the old and the new radiation scheme, we find that the simulation with the new scheme shows considerable improvements, e.g. concerning the cold-point temperature and stratospheric water vapour. Furthermore, perturbations of radiative fluxes associated with greenhouse gas changes, e.g. of methane, tend to be improved when the new scheme is employed.
Yibing Wang, Xianhong Xie, Bowen Zhu, Arken Tursun, Fuxiao Jiang, Yao Liu, Dawei Peng, and Buyun Zheng
Geosci. Model Dev., 17, 5803–5819, https://doi.org/10.5194/gmd-17-5803-2024, https://doi.org/10.5194/gmd-17-5803-2024, 2024
Short summary
Short summary
Urban expansion intensifies challenges like urban heat and urban dry islands. To address this, we developed an urban module, VIC-urban, in the Variable Infiltration Capacity (VIC) model. Tested in Beijing, VIC-urban accurately simulated turbulent heat fluxes, runoff, and land surface temperature. We provide a reliable tool for large-scale simulations considering urban environment and a systematic urban modelling framework within VIC, offering crucial insights for urban planners and designers.
Jeremy Carter, Erick A. Chacón-Montalván, and Amber Leeson
Geosci. Model Dev., 17, 5733–5757, https://doi.org/10.5194/gmd-17-5733-2024, https://doi.org/10.5194/gmd-17-5733-2024, 2024
Short summary
Short summary
Climate models are essential tools in the study of climate change and its wide-ranging impacts on life on Earth. However, the output is often afflicted with some bias. In this paper, a novel model is developed to predict and correct bias in the output of climate models. The model captures uncertainty in the correction and explicitly models underlying spatial correlation between points. These features are of key importance for climate change impact assessments and resulting decision-making.
Anna Martin, Veronika Gayler, Benedikt Steil, Klaus Klingmüller, Patrick Jöckel, Holger Tost, Jos Lelieveld, and Andrea Pozzer
Geosci. Model Dev., 17, 5705–5732, https://doi.org/10.5194/gmd-17-5705-2024, https://doi.org/10.5194/gmd-17-5705-2024, 2024
Short summary
Short summary
The study evaluates the land surface and vegetation model JSBACHv4 as a replacement for the simplified submodel SURFACE in EMAC. JSBACH mitigates earlier problems of soil dryness, which are critical for vegetation modelling. When analysed using different datasets, the coupled model shows strong correlations of key variables, such as land surface temperature, surface albedo and radiation flux. The versatility of the model increases significantly, while the overall performance does not degrade.
Hugo Banderier, Christian Zeman, David Leutwyler, Stefan Rüdisühli, and Christoph Schär
Geosci. Model Dev., 17, 5573–5586, https://doi.org/10.5194/gmd-17-5573-2024, https://doi.org/10.5194/gmd-17-5573-2024, 2024
Short summary
Short summary
We investigate the effects of reduced-precision arithmetic in a state-of-the-art regional climate model by studying the results of 10-year-long simulations. After this time, the results of the reduced precision and the standard implementation are hardly different. This should encourage the use of reduced precision in climate models to exploit the speedup and memory savings it brings. The methodology used in this work can help researchers verify reduced-precision implementations of their model.
David Fuchs, Steven C. Sherwood, Abhnil Prasad, Kirill Trapeznikov, and Jim Gimlett
Geosci. Model Dev., 17, 5459–5475, https://doi.org/10.5194/gmd-17-5459-2024, https://doi.org/10.5194/gmd-17-5459-2024, 2024
Short summary
Short summary
Machine learning (ML) of unresolved processes offers many new possibilities for improving weather and climate models, but integrating ML into the models has been an engineering challenge, and there are performance issues. We present a new software plugin for this integration, TorchClim, that is scalable and flexible and thereby allows a new level of experimentation with the ML approach. We also provide guidance on ML training and demonstrate a skillful hybrid ML atmosphere model.
Minjin Lee, Charles A. Stock, John P. Dunne, and Elena Shevliakova
Geosci. Model Dev., 17, 5191–5224, https://doi.org/10.5194/gmd-17-5191-2024, https://doi.org/10.5194/gmd-17-5191-2024, 2024
Short summary
Short summary
Modeling global freshwater solid and nutrient loads, in both magnitude and form, is imperative for understanding emerging eutrophication problems. Such efforts, however, have been challenged by the difficulty of balancing details of freshwater biogeochemical processes with limited knowledge, input, and validation datasets. Here we develop a global freshwater model that resolves intertwined algae, solid, and nutrient dynamics and provide performance assessment against measurement-based estimates.
Hunter York Brown, Benjamin Wagman, Diana Bull, Kara Peterson, Benjamin Hillman, Xiaohong Liu, Ziming Ke, and Lin Lin
Geosci. Model Dev., 17, 5087–5121, https://doi.org/10.5194/gmd-17-5087-2024, https://doi.org/10.5194/gmd-17-5087-2024, 2024
Short summary
Short summary
Explosive volcanic eruptions lead to long-lived, microscopic particles in the upper atmosphere which act to cool the Earth's surface by reflecting the Sun's light back to space. We include and test this process in a global climate model, E3SM. E3SM is tested against satellite and balloon observations of the 1991 eruption of Mt. Pinatubo, showing that with these particles in the model we reasonably recreate Pinatubo and its global effects. We also explore how particle size leads to these effects.
Carl Svenhag, Moa K. Sporre, Tinja Olenius, Daniel Yazgi, Sara M. Blichner, Lars P. Nieradzik, and Pontus Roldin
Geosci. Model Dev., 17, 4923–4942, https://doi.org/10.5194/gmd-17-4923-2024, https://doi.org/10.5194/gmd-17-4923-2024, 2024
Short summary
Short summary
Our research shows the importance of modeling new particle formation (NPF) and growth of particles in the atmosphere on a global scale, as they influence the outcomes of clouds and our climate. With the global model EC-Earth3 we show that using a new method for NPF modeling, which includes new detailed processes with NH3 and H2SO4, significantly impacts the number of particles in the air and clouds and changes the radiation balance of the same magnitude as anthropogenic greenhouse emissions.
Mengjie Han, Qing Zhao, Xili Wang, Ying-Ping Wang, Philippe Ciais, Haicheng Zhang, Daniel S. Goll, Lei Zhu, Zhe Zhao, Zhixuan Guo, Chen Wang, Wei Zhuang, Fengchang Wu, and Wei Li
Geosci. Model Dev., 17, 4871–4890, https://doi.org/10.5194/gmd-17-4871-2024, https://doi.org/10.5194/gmd-17-4871-2024, 2024
Short summary
Short summary
The impact of biochar (BC) on soil organic carbon (SOC) dynamics is not represented in most land carbon models used for assessing land-based climate change mitigation. Our study develops a BC model that incorporates our current understanding of BC effects on SOC based on a soil carbon model (MIMICS). The BC model can reproduce the SOC changes after adding BC, providing a useful tool to couple dynamic land models to evaluate the effectiveness of BC application for CO2 removal from the atmosphere.
Kalyn Dorheim, Skylar Gering, Robert Gieseke, Corinne Hartin, Leeya Pressburger, Alexey N. Shiklomanov, Steven J. Smith, Claudia Tebaldi, Dawn L. Woodard, and Ben Bond-Lamberty
Geosci. Model Dev., 17, 4855–4869, https://doi.org/10.5194/gmd-17-4855-2024, https://doi.org/10.5194/gmd-17-4855-2024, 2024
Short summary
Short summary
Hector is an easy-to-use, global climate–carbon cycle model. With its quick run time, Hector can provide climate information from a run in a fraction of a second. Hector models on a global and annual basis. Here, we present an updated version of the model, Hector V3. In this paper, we document Hector’s new features. Hector V3 is capable of reproducing historical observations, and its future temperature projections are consistent with those of more complex models.
Fangxuan Ren, Jintai Lin, Chenghao Xu, Jamiu A. Adeniran, Jingxu Wang, Randall V. Martin, Aaron van Donkelaar, Melanie S. Hammer, Larry W. Horowitz, Steven T. Turnock, Naga Oshima, Jie Zhang, Susanne Bauer, Kostas Tsigaridis, Øyvind Seland, Pierre Nabat, David Neubauer, Gary Strand, Twan van Noije, Philippe Le Sager, and Toshihiko Takemura
Geosci. Model Dev., 17, 4821–4836, https://doi.org/10.5194/gmd-17-4821-2024, https://doi.org/10.5194/gmd-17-4821-2024, 2024
Short summary
Short summary
We evaluate the performance of 14 CMIP6 ESMs in simulating total PM2.5 and its 5 components over China during 2000–2014. PM2.5 and its components are underestimated in almost all models, except that black carbon (BC) and sulfate are overestimated in two models, respectively. The underestimation is the largest for organic carbon (OC) and the smallest for BC. Models reproduce the observed spatial pattern for OC, sulfate, nitrate and ammonium well, yet the agreement is poorer for BC.
Yi Xi, Chunjing Qiu, Yuan Zhang, Dan Zhu, Shushi Peng, Gustaf Hugelius, Jinfeng Chang, Elodie Salmon, and Philippe Ciais
Geosci. Model Dev., 17, 4727–4754, https://doi.org/10.5194/gmd-17-4727-2024, https://doi.org/10.5194/gmd-17-4727-2024, 2024
Short summary
Short summary
The ORCHIDEE-MICT model can simulate the carbon cycle and hydrology at a sub-grid scale but energy budgets only at a grid scale. This paper assessed the implementation of a multi-tiling energy budget approach in ORCHIDEE-MICT and found warmer surface and soil temperatures, higher soil moisture, and more soil organic carbon across the Northern Hemisphere compared with the original version.
Georgia Lazoglou, Theo Economou, Christina Anagnostopoulou, George Zittis, Anna Tzyrkalli, Pantelis Georgiades, and Jos Lelieveld
Geosci. Model Dev., 17, 4689–4703, https://doi.org/10.5194/gmd-17-4689-2024, https://doi.org/10.5194/gmd-17-4689-2024, 2024
Short summary
Short summary
This study focuses on the important issue of the drizzle bias effect in regional climate models, described by an over-prediction of the number of rainy days while underestimating associated precipitation amounts. For this purpose, two distinct methodologies are applied and rigorously evaluated. These results are encouraging for using the multivariate machine learning method random forest to increase the accuracy of climate models concerning the projection of the number of wet days.
Xu Yue, Hao Zhou, Chenguang Tian, Yimian Ma, Yihan Hu, Cheng Gong, Hui Zheng, and Hong Liao
Geosci. Model Dev., 17, 4621–4642, https://doi.org/10.5194/gmd-17-4621-2024, https://doi.org/10.5194/gmd-17-4621-2024, 2024
Short summary
Short summary
We develop the interactive Model for Air Pollution and Land Ecosystems (iMAPLE). The model considers the full coupling between carbon and water cycles, dynamic fire emissions, wetland methane emissions, biogenic volatile organic compound emissions, and trait-based ozone vegetation damage. Evaluations show that iMAPLE is a useful tool for the study of the interactions among climate, chemistry, and ecosystems.
Malte Meinshausen, Carl-Friedrich Schleussner, Kathleen Beyer, Greg Bodeker, Olivier Boucher, Josep G. Canadell, John S. Daniel, Aïda Diongue-Niang, Fatima Driouech, Erich Fischer, Piers Forster, Michael Grose, Gerrit Hansen, Zeke Hausfather, Tatiana Ilyina, Jarmo S. Kikstra, Joyce Kimutai, Andrew D. King, June-Yi Lee, Chris Lennard, Tabea Lissner, Alexander Nauels, Glen P. Peters, Anna Pirani, Gian-Kasper Plattner, Hans Pörtner, Joeri Rogelj, Maisa Rojas, Joyashree Roy, Bjørn H. Samset, Benjamin M. Sanderson, Roland Séférian, Sonia Seneviratne, Christopher J. Smith, Sophie Szopa, Adelle Thomas, Diana Urge-Vorsatz, Guus J. M. Velders, Tokuta Yokohata, Tilo Ziehn, and Zebedee Nicholls
Geosci. Model Dev., 17, 4533–4559, https://doi.org/10.5194/gmd-17-4533-2024, https://doi.org/10.5194/gmd-17-4533-2024, 2024
Short summary
Short summary
The scientific community is considering new scenarios to succeed RCPs and SSPs for the next generation of Earth system model runs to project future climate change. To contribute to that effort, we reflect on relevant policy and scientific research questions and suggest categories for representative emission pathways. These categories are tailored to the Paris Agreement long-term temperature goal, high-risk outcomes in the absence of further climate policy and worlds “that could have been”.
Ross Mower, Ethan D. Gutmann, Glen E. Liston, Jessica Lundquist, and Soren Rasmussen
Geosci. Model Dev., 17, 4135–4154, https://doi.org/10.5194/gmd-17-4135-2024, https://doi.org/10.5194/gmd-17-4135-2024, 2024
Short summary
Short summary
Higher-resolution model simulations are better at capturing winter snowpack changes across space and time. However, increasing resolution also increases the computational requirements. This work provides an overview of changes made to a distributed snow-evolution modeling system (SnowModel) to allow it to leverage high-performance computing resources. Continental simulations that were previously estimated to take 120 d can now be performed in 5 h.
Jiaxu Guo, Juepeng Zheng, Yidan Xu, Haohuan Fu, Wei Xue, Lanning Wang, Lin Gan, Ping Gao, Wubing Wan, Xianwei Wu, Zhitao Zhang, Liang Hu, Gaochao Xu, and Xilong Che
Geosci. Model Dev., 17, 3975–3992, https://doi.org/10.5194/gmd-17-3975-2024, https://doi.org/10.5194/gmd-17-3975-2024, 2024
Short summary
Short summary
To enhance the efficiency of experiments using SCAM, we train a learning-based surrogate model to facilitate large-scale sensitivity analysis and tuning of combinations of multiple parameters. Employing a hybrid method, we investigate the joint sensitivity of multi-parameter combinations across typical cases, identifying the most sensitive three-parameter combination out of 11. Subsequently, we conduct a tuning process aimed at reducing output errors in these cases.
Yung-Yao Lan, Huang-Hsiung Hsu, and Wan-Ling Tseng
Geosci. Model Dev., 17, 3897–3918, https://doi.org/10.5194/gmd-17-3897-2024, https://doi.org/10.5194/gmd-17-3897-2024, 2024
Short summary
Short summary
This study uses the CAM5–SIT coupled model to investigate the effects of SST feedback frequency on the MJO simulations with intervals at 30 min, 1, 3, 6, 12, 18, 24, and 30 d. The simulations become increasingly unrealistic as the frequency of the SST feedback decreases. Our results suggest that more spontaneous air--sea interaction (e.g., ocean response within 3 d in this study) with high vertical resolution in the ocean model is key to the realistic simulation of the MJO.
Jiwoo Lee, Peter J. Gleckler, Min-Seop Ahn, Ana Ordonez, Paul A. Ullrich, Kenneth R. Sperber, Karl E. Taylor, Yann Y. Planton, Eric Guilyardi, Paul Durack, Celine Bonfils, Mark D. Zelinka, Li-Wei Chao, Bo Dong, Charles Doutriaux, Chengzhu Zhang, Tom Vo, Jason Boutte, Michael F. Wehner, Angeline G. Pendergrass, Daehyun Kim, Zeyu Xue, Andrew T. Wittenberg, and John Krasting
Geosci. Model Dev., 17, 3919–3948, https://doi.org/10.5194/gmd-17-3919-2024, https://doi.org/10.5194/gmd-17-3919-2024, 2024
Short summary
Short summary
We introduce an open-source software, the PCMDI Metrics Package (PMP), developed for a comprehensive comparison of Earth system models (ESMs) with real-world observations. Using diverse metrics evaluating climatology, variability, and extremes simulated in thousands of simulations from the Coupled Model Intercomparison Project (CMIP), PMP aids in benchmarking model improvements across generations. PMP also enables efficient tracking of performance evolutions during ESM developments.
Haoyue Zuo, Yonggang Liu, Gaojun Li, Zhifang Xu, Liang Zhao, Zhengtang Guo, and Yongyun Hu
Geosci. Model Dev., 17, 3949–3974, https://doi.org/10.5194/gmd-17-3949-2024, https://doi.org/10.5194/gmd-17-3949-2024, 2024
Short summary
Short summary
Compared to the silicate weathering fluxes measured at large river basins, the current models tend to systematically overestimate the fluxes over the tropical region, which leads to an overestimation of the global total weathering flux. The most possible cause of such bias is found to be the overestimation of tropical surface erosion, which indicates that the tropical vegetation likely slows down physical erosion significantly. We propose a way of taking this effect into account in models.
Quentin Pikeroen, Didier Paillard, and Karine Watrin
Geosci. Model Dev., 17, 3801–3814, https://doi.org/10.5194/gmd-17-3801-2024, https://doi.org/10.5194/gmd-17-3801-2024, 2024
Short summary
Short summary
All accurate climate models use equations with poorly defined parameters, where knobs for the parameters are turned to fit the observations. This process is called tuning. In this article, we use another paradigm. We use a thermodynamic hypothesis, the maximum entropy production, to compute temperatures, energy fluxes, and precipitation, where tuning is impossible. For now, the 1D vertical model is used for a tropical atmosphere. The correct order of magnitude of precipitation is computed.
Sarah Schöngart, Lukas Gudmundsson, Mathias Hauser, Peter Pfleiderer, Quentin Lejeune, Shruti Nath, Sonia Isabelle Seneviratne, and Carl-Friedrich Schleußner
EGUsphere, https://doi.org/10.5194/egusphere-2024-278, https://doi.org/10.5194/egusphere-2024-278, 2024
Short summary
Short summary
Precipitation and temperature are two of the most impact-relevant climatic variables. Their joint distribution largely determines the division into climate regimes. Yet, projecting precipitation and temperature data under different emission scenarios relies on complex models that are computationally expensive. In this study, we propose a method that allows to generate monthly means of local precipitation and temperature at low computational costs.
Jishi Zhang, Peter Bogenschutz, Qi Tang, Philip Cameron-smith, and Chengzhu Zhang
Geosci. Model Dev., 17, 3687–3731, https://doi.org/10.5194/gmd-17-3687-2024, https://doi.org/10.5194/gmd-17-3687-2024, 2024
Short summary
Short summary
We developed a regionally refined climate model that allows resolved convection and performed a 20-year projection to the end of the century. The model has a resolution of 3.25 km in California, which allows us to predict climate with unprecedented accuracy, and a resolution of 100 km for the rest of the globe to achieve efficient, self-consistent simulations. The model produces superior results in reproducing climate patterns over California that typical modern climate models cannot resolve.
Xiaohui Zhong, Xing Yu, and Hao Li
Geosci. Model Dev., 17, 3667–3685, https://doi.org/10.5194/gmd-17-3667-2024, https://doi.org/10.5194/gmd-17-3667-2024, 2024
Short summary
Short summary
In order to forecast localized warm-sector rainfall in the south China region, numerical weather prediction models are being run with finer grid spacing. The conventional convection parameterization (CP) performs poorly in the gray zone, necessitating the development of a scale-aware scheme. We propose a machine learning (ML) model to replace the scale-aware CP scheme. Evaluation against the original CP scheme has shown that the ML-based CP scheme can provide accurate and reliable predictions.
Taufiq Hassan, Kai Zhang, Jianfeng Li, Balwinder Singh, Shixuan Zhang, Hailong Wang, and Po-Lun Ma
Geosci. Model Dev., 17, 3507–3532, https://doi.org/10.5194/gmd-17-3507-2024, https://doi.org/10.5194/gmd-17-3507-2024, 2024
Short summary
Short summary
Anthropogenic aerosol emissions are an essential part of global aerosol models. Significant errors can exist from the loss of emission heterogeneity. We introduced an emission treatment that significantly improved aerosol emission heterogeneity in high-resolution model simulations, with improvements in simulated aerosol surface concentrations. The emission treatment will provide a more accurate representation of aerosol emissions and their effects on climate.
Feng Zhu, Julien Emile-Geay, Gregory J. Hakim, Dominique Guillot, Deborah Khider, Robert Tardif, and Walter A. Perkins
Geosci. Model Dev., 17, 3409–3431, https://doi.org/10.5194/gmd-17-3409-2024, https://doi.org/10.5194/gmd-17-3409-2024, 2024
Short summary
Short summary
Climate field reconstruction encompasses methods that estimate the evolution of climate in space and time based on natural archives. It is useful to investigate climate variations and validate climate models, but its implementation and use can be difficult for non-experts. This paper introduces a user-friendly Python package called cfr to make these methods more accessible, thanks to the computational and visualization tools that facilitate efficient and reproducible research on past climates.
Rose V. Palermo, J. Taylor Perron, Jason M. Soderblom, Samuel P. D. Birch, Alexander G. Hayes, and Andrew D. Ashton
Geosci. Model Dev., 17, 3433–3445, https://doi.org/10.5194/gmd-17-3433-2024, https://doi.org/10.5194/gmd-17-3433-2024, 2024
Short summary
Short summary
Models of rocky coastal erosion help us understand the controls on coastal morphology and evolution. In this paper, we present a simplified model of coastline erosion driven by either uniform erosion where coastline erosion is constant or wave-driven erosion where coastline erosion is a function of the wave power. This model can be used to evaluate how coastline changes reflect climate, sea-level history, material properties, and the relative influence of different erosional processes.
Safae Oumami, Joaquim Arteta, Vincent Guidard, Pierre Tulet, and Paul David Hamer
Geosci. Model Dev., 17, 3385–3408, https://doi.org/10.5194/gmd-17-3385-2024, https://doi.org/10.5194/gmd-17-3385-2024, 2024
Short summary
Short summary
In this paper, we coupled the SURFEX and MEGAN models. The aim of this coupling is to improve the estimation of biogenic fluxes by using the SURFEX canopy environment model. The coupled model results were validated and several sensitivity tests were performed. The coupled-model total annual isoprene flux is 442 Tg; this value is within the range of other isoprene estimates reported. The ultimate aim of this coupling is to predict the impact of climate change on biogenic emissions.
Lars Ackermann, Thomas Rackow, Kai Himstedt, Paul Gierz, Gregor Knorr, and Gerrit Lohmann
Geosci. Model Dev., 17, 3279–3301, https://doi.org/10.5194/gmd-17-3279-2024, https://doi.org/10.5194/gmd-17-3279-2024, 2024
Short summary
Short summary
We present long-term simulations with interactive icebergs in the Southern Ocean. By melting, icebergs reduce the temperature and salinity of the surrounding ocean. In our simulations, we find that this cooling effect of iceberg melting is not limited to the surface ocean but also reaches the deep ocean and propagates northward into all ocean basins. Additionally, the formation of deep-water masses in the Southern Ocean is enhanced.
Nanhong Xie, Tijian Wang, Xiaodong Xie, Xu Yue, Filippo Giorgi, Qian Zhang, Danyang Ma, Rong Song, Beiyao Xu, Shu Li, Bingliang Zhuang, Mengmeng Li, Min Xie, Natalya Andreeva Kilifarska, Georgi Gadzhev, and Reneta Dimitrova
Geosci. Model Dev., 17, 3259–3277, https://doi.org/10.5194/gmd-17-3259-2024, https://doi.org/10.5194/gmd-17-3259-2024, 2024
Short summary
Short summary
For the first time, we coupled a regional climate chemistry model, RegCM-Chem, with a dynamic vegetation model, YIBs, to create a regional climate–chemistry–ecology model, RegCM-Chem–YIBs. We applied it to simulate climatic, chemical, and ecological parameters in East Asia and fully validated it on a variety of observational data. Results show that RegCM-Chem–YIBs model is a valuable tool for studying the terrestrial carbon cycle, atmospheric chemistry, and climate change on a regional scale.
Ha Thi Minh Ho-Hagemann, Vera Maurer, Stefan Poll, and Irina Fast
EGUsphere, https://doi.org/10.5194/egusphere-2024-923, https://doi.org/10.5194/egusphere-2024-923, 2024
Short summary
Short summary
The regional Earth system model GCOAST-AHOI version 2.0 including the regional climate model ICON-CLM coupled with the ocean model NEMO and the hydrological discharge model HD via the OASIS3-MCT coupler can be a useful tool for conducting long-term regional climate simulations over the EURO-CORDEX domain. The new OASIS3-MCT coupling interface implemented in the ICON-CLM model makes it more flexible to couple with an external ocean model and an external hydrological discharge model.
Bryce E. Harrop, Jian Lu, L. Ruby Leung, William K. M. Lau, Kyu-Myong Kim, Brian Medeiros, Brian J. Soden, Gabriel A. Vecchi, Bosong Zhang, and Balwinder Singh
Geosci. Model Dev., 17, 3111–3135, https://doi.org/10.5194/gmd-17-3111-2024, https://doi.org/10.5194/gmd-17-3111-2024, 2024
Short summary
Short summary
Seven new experimental setups designed to interfere with cloud radiative heating have been added to the Energy Exascale Earth System Model (E3SM). These experiments include both those that test the mean impact of cloud radiative heating and those examining its covariance with circulations. This paper documents the code changes and steps needed to run these experiments. Results corroborate prior findings for how cloud radiative heating impacts circulations and rainfall patterns.
Mario C. Acosta, Sergi Palomas, Stella V. Paronuzzi Ticco, Gladys Utrera, Joachim Biercamp, Pierre-Antoine Bretonniere, Reinhard Budich, Miguel Castrillo, Arnaud Caubel, Francisco Doblas-Reyes, Italo Epicoco, Uwe Fladrich, Sylvie Joussaume, Alok Kumar Gupta, Bryan Lawrence, Philippe Le Sager, Grenville Lister, Marie-Pierre Moine, Jean-Christophe Rioual, Sophie Valcke, Niki Zadeh, and Venkatramani Balaji
Geosci. Model Dev., 17, 3081–3098, https://doi.org/10.5194/gmd-17-3081-2024, https://doi.org/10.5194/gmd-17-3081-2024, 2024
Short summary
Short summary
We present a collection of performance metrics gathered during the Coupled Model Intercomparison Project Phase 6 (CMIP6), a worldwide initiative to study climate change. We analyse the metrics that resulted from collaboration efforts among many partners and models and describe our findings to demonstrate the utility of our study for the scientific community. The research contributes to understanding climate modelling performance on the current high-performance computing (HPC) architectures.
Sabine Doktorowski, Jan Kretzschmar, Johannes Quaas, Marc Salzmann, and Odran Sourdeval
Geosci. Model Dev., 17, 3099–3110, https://doi.org/10.5194/gmd-17-3099-2024, https://doi.org/10.5194/gmd-17-3099-2024, 2024
Short summary
Short summary
Especially over the midlatitudes, precipitation is mainly formed via the ice phase. In this study we focus on the initial snow formation process in the ICON-AES, the aggregation process. We use a stochastical approach for the aggregation parameterization and investigate the influence in the ICON-AES. Therefore, a distribution function of cloud ice is created, which is evaluated with satellite data. The new approach leads to cloud ice loss and an improvement in the process rate bias.
Katie R. Blackford, Matthew Kasoar, Chantelle Burton, Eleanor Burke, Iain Colin Prentice, and Apostolos Voulgarakis
Geosci. Model Dev., 17, 3063–3079, https://doi.org/10.5194/gmd-17-3063-2024, https://doi.org/10.5194/gmd-17-3063-2024, 2024
Short summary
Short summary
Peatlands are globally important stores of carbon which are being increasingly threatened by wildfires with knock-on effects on the climate system. Here we introduce a novel peat fire parameterization in the northern high latitudes to the INFERNO global fire model. Representing peat fires increases annual burnt area across the high latitudes, alongside improvements in how we capture year-to-year variation in burning and emissions.
Pengfei Shi, L. Ruby Leung, Bin Wang, Kai Zhang, Samson M. Hagos, and Shixuan Zhang
Geosci. Model Dev., 17, 3025–3040, https://doi.org/10.5194/gmd-17-3025-2024, https://doi.org/10.5194/gmd-17-3025-2024, 2024
Short summary
Short summary
Improving climate predictions have profound socio-economic impacts. This study introduces a new weakly coupled land data assimilation (WCLDA) system for a coupled climate model. We demonstrate improved simulation of soil moisture and temperature in many global regions and throughout the soil layers. Furthermore, significant improvements are also found in reproducing the time evolution of the 2012 US Midwest drought. The WCLDA system provides the groundwork for future predictability studies.
Justin Peter, Elisabeth Vogel, Wendy Sharples, Ulrike Bende-Michl, Louise Wilson, Pandora Hope, Andrew Dowdy, Greg Kociuba, Sri Srikanthan, Vi Co Duong, Jake Roussis, Vjekoslav Matic, Zaved Khan, Alison Oke, Margot Turner, Stuart Baron-Hay, Fiona Johnson, Raj Mehrotra, Ashish Sharma, Marcus Thatcher, Ali Azarvinand, Steven Thomas, Ghyslaine Boschat, Chantal Donnelly, and Robert Argent
Geosci. Model Dev., 17, 2755–2781, https://doi.org/10.5194/gmd-17-2755-2024, https://doi.org/10.5194/gmd-17-2755-2024, 2024
Short summary
Short summary
We detail the production of datasets and communication to end users of high-resolution projections of rainfall, runoff, and soil moisture for the entire Australian continent. This is important as previous projections for Australia were for small regions and used differing techniques for their projections, making comparisons difficult across Australia's varied climate zones. The data will be beneficial for research purposes and to aid adaptation to climate change.
Daniele Visioni, Alan Robock, Jim Haywood, Matthew Henry, Simone Tilmes, Douglas G. MacMartin, Ben Kravitz, Sarah J. Doherty, John Moore, Chris Lennard, Shingo Watanabe, Helene Muri, Ulrike Niemeier, Olivier Boucher, Abu Syed, Temitope S. Egbebiyi, Roland Séférian, and Ilaria Quaglia
Geosci. Model Dev., 17, 2583–2596, https://doi.org/10.5194/gmd-17-2583-2024, https://doi.org/10.5194/gmd-17-2583-2024, 2024
Short summary
Short summary
This paper describes a new experimental protocol for the Geoengineering Model Intercomparison Project (GeoMIP). In it, we describe the details of a new simulation of sunlight reflection using the stratospheric aerosols that climate models are supposed to run, and we explain the reasons behind each choice we made when defining the protocol.
Sabin I. Taranu, David M. Lawrence, Yoshihide Wada, Ting Tang, Erik Kluzek, Sam Rabin, Yi Yao, Steven J. De Hertog, Inne Vanderkelen, and Wim Thiery
EGUsphere, https://doi.org/10.5194/egusphere-2024-362, https://doi.org/10.5194/egusphere-2024-362, 2024
Short summary
Short summary
In this study, we improve an existing climate model to account for human water usage across domestic, industrial, and agriculture purposes. With the new capabilities, the model is now better equipped for studying questions related to water scarcity in both present and future conditions under climate change. Despite the advancements, there remains important limitations in our modelling framework which requires further work.
Jose Rafael Guarin, Jonas Jägermeyr, Elizabeth A. Ainsworth, Fabio A. A. Oliveira, Senthold Asseng, Kenneth Boote, Joshua Elliott, Lisa Emberson, Ian Foster, Gerrit Hoogenboom, David Kelly, Alex C. Ruane, and Katrina Sharps
Geosci. Model Dev., 17, 2547–2567, https://doi.org/10.5194/gmd-17-2547-2024, https://doi.org/10.5194/gmd-17-2547-2024, 2024
Short summary
Short summary
The effects of ozone (O3) stress on crop photosynthesis and leaf senescence were added to maize, rice, soybean, and wheat crop models. The modified models reproduced growth and yields under different O3 levels measured in field experiments and reported in the literature. The combined interactions between O3 and additional stresses were reproduced with the new models. These updated crop models can be used to simulate impacts of O3 stress under future climate change and air pollution scenarios.
Jiachen Lu, Negin Nazarian, Melissa Anne Hart, E. Scott Krayenhoff, and Alberto Martilli
Geosci. Model Dev., 17, 2525–2545, https://doi.org/10.5194/gmd-17-2525-2024, https://doi.org/10.5194/gmd-17-2525-2024, 2024
Short summary
Short summary
This study enhances urban canopy models by refining key assumptions. Simulations for various urban scenarios indicate discrepancies in turbulent transport efficiency for flow properties. We propose two modifications that involve characterizing diffusion coefficients for momentum and turbulent kinetic energy separately and introducing a physics-based
mass-fluxterm. These adjustments enhance the model's performance, offering more reliable temperature and surface flux estimates.
Justin L. Willson, Kevin A. Reed, Christiane Jablonowski, James Kent, Peter H. Lauritzen, Ramachandran Nair, Mark A. Taylor, Paul A. Ullrich, Colin M. Zarzycki, David M. Hall, Don Dazlich, Ross Heikes, Celal Konor, David Randall, Thomas Dubos, Yann Meurdesoif, Xi Chen, Lucas Harris, Christian Kühnlein, Vivian Lee, Abdessamad Qaddouri, Claude Girard, Marco Giorgetta, Daniel Reinert, Hiroaki Miura, Tomoki Ohno, and Ryuji Yoshida
Geosci. Model Dev., 17, 2493–2507, https://doi.org/10.5194/gmd-17-2493-2024, https://doi.org/10.5194/gmd-17-2493-2024, 2024
Short summary
Short summary
Accurate simulation of tropical cyclones (TCs) is essential to understanding their behavior in a changing climate. One way this is accomplished is through model intercomparison projects, where results from multiple climate models are analyzed to provide benchmark solutions for the wider climate modeling community. This study describes and analyzes the previously developed TC test case for nine climate models in an intercomparison project, providing solutions that aid in model development.
Cited articles
Aber, J., Neilson, R. P., McNulty, S., Lenihan, J. M., Bachelet, D., and
Drapek, R. J.: Forest processes and global environmental change: predicting
the effects of individual and multiple stressors, Bioscience, 51, 735–751,
2001.
André, F., Jonard, M., and Ponette, Q.: Precipitation water storage
capacity in a temperate mixed oak–beech canopy, Hydrol. Process., 22,
4130–4141, 2008a.
André, F., Jonard, M., and Ponette, Q.: Influence of species and rain
event characteristics on stemflow volume in a temperate mixed oak–beech
stand, Hydrol. Process., 22, 4455–4466, 2008b.
André, F., Jonard, M., and Ponette, Q.: Biomass and nutrient content of
sessile oak (Quercus petraea (Matt.) Liebl.) and beech (Fagus sylvatica L.) stem and branches in a mixed
stand in southern Belgium, Sci. Total Environ., 408, 2285–2294, 2010.
André, F., Jonard, M., Jonard, F., and Ponette, Q.: Spatial and temporal
patterns of throughfall volume in a deciduous mixed-species stand, J.
Hydrol., 400, 244–255, 2011.
Anlauf, R. and Liu, Y. P.: Simulation of simple one-dimensional transport
processes, in: Models for Processes in the Soil: Programs
and Exercises, edited by: Richter, J., Catena Verlag, Cremlingen-Desdedt, Germany, 1990.
Baker, D. L. and Don Scott, H.: A limited tutorial on using finite
differences in soil physics problems, available at:
http://www.aquarien.com/findif/Findifa4.html (last access: 29 February 2020), 1998.
Ball, J. T., Woodrow, I. E., and Berry, J. A.: A model predicting stomatal
conductance and its contribution to the control of photosynthetis under
different environmental conditions, in: Progress in
Photosynthesis Research, edited by: Biggins, J., vol. 4, 221–224, 1987.
Berger, U., Piou, C., Schiffers, K., and Grimm, V.: Competition among plants: concepts, individual-based modelling approaches, and a proposal for a future research strategy, Perspect. Plant Ecol., 9, 121–135, 2008.
Boisvenue, C. and Running, S. W.: Impacts of climate change on natural forest
productivity–evidence since the middle of the 20th century, Glob. Change
Biol., 12, 862–882, 2006.
Bontemps, J. D., Hervé, J. C., Leban, J. M., and Dhôte, J. F.: Nitrogen footprint in a long-term observation of forest growth over the twentieth century., Trees, 25, 237–251, 2011.
Bosc, A.: EMILION, a tree functional-structural model: presentation and
first application to the analysis of branch carbon balance, Ann. Forest Sci.,
57, 555–569, 2000.
Bravo, F., Fabrika, M., Ammer, C., Barreiro, S., Bielak, K., Coll, L., Fonseca, T., Kangur, A., Löf, M., Merganicova, K., Pach, M., Pretzsch, H., Stojanovic, D., Schuler, L., Peric, S., Rötzer, T., del Rio, M., Dodan, M., and Bravo-Oviedo, A.: Modelling approaches for mixed forests dynamics prognosis, Research gaps and opportunities, Forest Syst., 28, eR002, doi:10.5424/fs/2019281-14342, 2019.
Campioli, M., Vincke, C., Jonard, M., Kint, V., Demarée, G., and Ponette,
Q.: Current status and predicted impact of climate change on forest
production and biogeochemistry in the temperate oceanic European zone:
review and prospects for Belgium as a case study, J. Forest Res., 17, 1–18,
2012.
Cantarello, E., Newton, A. C., Martin, P. A., Evans, P. M., Gosal, A., and
Lucash, M. S.: Quantifying resilience of multiple ecosystem services and
biodiversity in a temperate forest landscape, Ecol. Evol., 7, 9661–9675,
2017.
Carl, C., Biber, P., Veste, M., Landgraf, D., and Pretzsch, H.: Key drivers
of competition and growth partitioning among Robinia pseudoacacia L. trees,
Forest Ecol. Manage., 430, 86–93, 2018.
Charlton, S. R. and Parkhurst, D. L.: Modules based on the geochemical model
PHREEQC for use in scripting and programming languages, Comput. Geosci.,
37, 1653–1663, 2011.
Cichota, R., Elias, E. A., and van Lier, Q. D. J.: Testing a finite-difference model for soil heat transfer by comparing numerical and analytical solutions, Environ. Model. Softw., 19, 495–506, 2004.
Collalti, A., Trotta, C., Keenan, T. F., Ibrom, A., Bond-Lamberty, B.,
Grote, R., Vicca, S., Reyer, C. P. O., Migliavacca, M., Veroustraete, F., Anav, A., Campioli, M., Scoccimarro, E., Šigut, L., Grieco, E., Cescatti, A., and Matteucci G.: Thinning can reduce losses in carbon use efficiency and
carbon stocks in managed forests under warmer climate, J. Adv. Model. Earth
Sy., 10, 2427–2452, 2018.
Collalti, A. and Prentice, I. C.: Is NPP proportional to GPP? Waring's
hypothesis 20 years on, Tree Physiol. 39, 1473–1483, 2019.
Collins, M., Knutti, R., Arblaster, J., Dufresne, J. L., Fichefet, T.,
Friedlingstein, P., Gao, X., Gutowski, W. J., Johns, T., Krinner, G.,
Shongwe, M., Tebaldi, C., Weaver, A. J., and Wehner, M.: Long-term Climate
Change: Projections, Commitments and Irreversibility, in: Climate Change 2013: The Physical Science Basis, Contribution of Working Group I to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change, edited by: Stocker, T. F., Qin, D., Plattner, G. K., Tignor, M., Allen, S. K., Boschung, J., Nauels, A., Xia, Y., Bex, V., Midgley, P. M., Cambridge University Press, Cambridge, UK, New York, NY, USA, 2013.
Courbaud, B., de Coligny, F., and Cordonnier, T.: Simulating radiation
distribution in a heterogeneous Norway spruce forest on a slope, Agr. Forest
Meteorol., 116, 1–18, 2003.
Dagnelie, P., Palm, R., Rondeux, J., and Thill, A.: Tables de cubage des arbres
et des peuplements forestiers, Les Presses Agronomiques de Gembloux,
Gembloux, Belgique, 1999.
Damesin, C., Ceschia, E., Le Goff, N., Ottorini, J. M., and Dufrêne, E.:
Stem and branch respiration of beech: from tree measurements to estimations
at the stand level, New Phytol., 153, 159–172, 2002.
Davi, H., Dufrêne, E., Francois, C., Le Maire, G., Loustau, D., Bosc,
A., Rambal, S., Granier, A., and Moors, E.: Sensitivity of water and carbon
fluxes to climate changes from 1960 to 2100 in European forest ecosystems,
Agr. Forest Meteorol., 141, 35–56, 2006.
Davi, H., Cailleret, M., Restoux, G., Amm, A., Pichot, C., and Fady, B.:
Disentangling the factors driving tree reproduction,
Ecosphere, 7, e01389, https://doi.org/10.1002/ecs2.1389, 2016.
del Río, M., Bravo-Oviedo, A., Ruiz-Peinado, R., and Condés, S.:
Tree allometry variation in response to intra- and inter-specific
competitions, Trees, 33, 121–138, 2019.
de Wergifosse, L., André, F., Beudez, N., de Coligny, F., Goosse, H., Jonard, F., Ponette, Q., Titeux, H., Vincke, C., and Jonard, M.: HETEROFOR 1.0: a spatially explicit model for exploring the response of structurally complex forests to uncertain future conditions. II. Phenology and water cycle, Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2019-201, in review, 2019.
de Wergifosse, L., André, F., Goosse, H., Caluwaerts, S., De Cruz, L.,
De Troch, R., and Van Schaeybroeck, B.: CO2 fertilization, water deficit and vegetation period drive the response of mixed broadleaved forests to a changing climate in Wallonia, Ann. Forest Sci., in review, 2020.
Dufour-Kowalski, S., Courbaud, B., Dreyfus, P., Meredieu, C., and de
Coligny, F.: Capsis: an open software framework and community for forest
growth modelling, Ann. Forest Sci., 69, 221–233, 2012.
Dufrêne, E., Davi, H., François, C., Le Maire, G., Le Dantec, V.,
and Granier, A.: Modelling carbon and water cycles in a beech forest: Part
I: Model description and uncertainty analysis on modelled NEE, Ecol. Model.,
185, 407–436, 2005.
Duursma, R. A. and Medlyn, B. E.: MAESPA: a model to study interactions between water limitation, environmental drivers and vegetation function at tree and stand levels, with an example application to [CO2] × drought interactions, Geosci. Model Dev., 5, 919–940, https://doi.org/10.5194/gmd-5-919-2012, 2012.
Ennos, R., Cottrell, J., Hall, J., and O'Brien, D.: Is the introduction of
novel exotic forest tree species a rational response to rapid environmental
change? – A British perspective, Forest Ecol. Manag., 432, 718–728,
2019.
Epron, D., Le Dantec, V., Dufrêne, E., and Granier, A.: Seasonal
dynamics of soil carbon efflux and simulated rhizosphere respiration in a
beech forest, Tree Physiol., 21, 145–152, 2001.
Farquhar, G. D., von Caemmerer, S., and Berry, J. A.: A biochemical model of
photosynthetic CO2 assimilation in leaves of C3 species, Planta, 149,
78–80, 1980.
Fernandez-Martinez, M., Vicca, S., Janssens, I. A., Sardans, J., Luyssaert,
S., Campioli, M., Chapin III, F. S., Ciais, P., Malhi, Y., Obersteiner, M.,
Papale, D., Piao, S. L., Reichstein, M., Rodà, F., and Peñuelas, J.:
Nutrient availability as the key regulator of global forest carbon balance.
Nat. Clim. Change, 4, 471–476, 2014.
Forrester, D. I. and Albrecht, A. T.: Light absorption and light-use
efficiency in mixtures of Abies alba and Picea abies along a productivity
gradient, Forest Ecol. Manag., 328, 94–102, 2014.
Genet, H., Bréda, N., and Dufrêne, E.: Age-related variation in
carbon allocation at tree and stand scales in beech (Fagus sylvatica L.) and sessile oak
(Quercus petraea (Matt.) Liebl.) using a chronosequence approach, Tree Physiol., 30, 177–192, 2010.
Genet, A., Wernsdörfer, H., Jonard, M., Pretzsch, H., Rauch, M.,
Ponette, Q., Nys, C., Legout, A., Ranger, J., Vallet P., and
Saint-André, L.: Ontogeny partly explains the apparent heterogeneity of
published biomass equations for Fagus sylvatica in central Europe, Forest
Ecol. Manag., 261, 1188–1202, 2011.
Giot, O., Termonia, P., Degrauwe, D., De Troch, R., Caluwaerts, S., Smet, G., Berckmans, J., Deckmyn, A., De Cruz, L., De Meutter, P., Duerinckx, A., Gerard, L., Hamdi, R., Van den Bergh, J., Van Ginderachter, M., and Van Schaeybroeck, B.: Validation of the ALARO-0 model within the EURO-CORDEX framework, Geosci. Model Dev., 9, 1143–1152, https://doi.org/10.5194/gmd-9-1143-2016, 2016.
Greene, D., Messier, C., Asselin, H., and Fortin, M.: The effect of light
availability and basal area on cone production in Abies balsamea and Picea
glauca, Can. J. Bot., 80, 370–377, 2002.
Grote, R. and Pretzsch, H.: A model for individual tree development based on
physiological processes, Plant Biol., 4, 167–180, 2002.
Haxeltine, A. and Prentice, I. C.: A general model for the light use
efficiency of primary production by terrestrial ecosystems, Funct. Ecol.,
10, 551–561, 1996.
Helmisaari, H. S., Derome, J., Nöjd, P., and Kukkola, M.: Fine root
biomass in relation to site and stand characteristics in Norway spruce and
Scots pine stands, Tree Physiol., 27, 1493–1504, 2007.
Henry, H. A. L. and Aarssen, L. W.: The interpretation of stem diameter-height allometry in trees: biomechanical constraints, neighbour effects, or biased
regressions?, Ecol. Lett., 2, 89–97, 1999.
Hounzandji, A. P., Jonard, M., Nys, C., Saint-André, L., and Ponette, Q.:
Improving the robustness of biomass functions: from empirical to functional
approaches, Ann. Forest Sci., 72, 795–810, 2015.
Janssen, P. H. M. and Heuberger, P. S. C.: Calibration of process-oriented
models, Ecol. Model., 83, 55–66, 1995.
Jonard, M., André, F., and Ponette, Q.: Modeling leaf dispersal in mixed
hardwood forests using a ballistic approach, Ecology, 87, 2306–2318, 2006.
Jonard, M., André, F., Jonard, F., Mouton, N., Procès, P., and
Ponette, Q.: Soil carbon dioxide efflux in pure and mixed stands of oak and
beech, Ann. Forest Sci., 64, 141–150, 2007.
Jonard, M., André, F., and Ponette, Q.: Tree species mediated effects on
leaf litter dynamics in pure and mixed stands of oak and beech, Can. J.
Forest Res., 38, 528–538, 2008.
Jonard, F., André, F., Ponette, Q., Vincke, C., and Jonard, M.: Sap flux
density and stomatal conductance of European beech and sessile oak trees in
pure and mixed stands during the summer drought of 2003, J. Hydrol., 409,
371–381, 2011.
Jonard, M., Fürst, A., Verstraeten, A., Thimonier, A., Timmermann, V.,
Potocic, N., Waldner, P., Benham, S., Hansen, K., Merila, P., Ponette, Q., De La Cruz, A. C., Roskams, P., Nicolas, M., Croisé, L., Ingerslev,
M., Matteuci, G., Decinti, B., Bascietto, M., and Rautio, P.: Tree mineral
nutrition is deteriorating in Europe, Global Change Biol., 21, 418–430,
2015.
Jonard, M., André, F., and de Wergifosse, L.: Code of HETEROFOR 1.0, https://doi.org/10.5281/zenodo.3591348, 2019.
Jonard, M., André, F., and de Wergifosse, L.: Installer of HETEROFOR 1.0, http://amap-dev.cirad.fr/projects/capsis/files, last access: 29 February 2020.
Jucker, T., Bouriaud, O., and Coomes, D. A.: Crown plasticity enables trees to
optimize canopy packing in mixed-species forest, Funct. Ecol., 29,
1078–1086, 2015.
Kersten, M. S.: Laboratory research for the determination of the thermal
properties of soils, University of Minnesota, Engineering Experiment
Station, 1949.
Le Moguédec, G. and Dhôte, J. F.: Fagacées: a tree-centered
growth and yield model for sessile oak (Quercus petraea L.) and common beech (Fagus sylvatica L.), Ann.
Forest Sci., 69, 257–269, 2012.
Letort, V., Cournède, P. H., Mathieu, A., de Reffye, P., and Constant,
T.: Parametric identification of a functional-structural tree growth model
and application to beech trees (Fagus sylvatica), Funct. Plant Biol., 35, 951–963, 2008.
Ligot, G., Balandier, P., Courbaud, B., Jonard, M., and Kneeshaw, D.:
Managing understory light to maintain a mixture of species with different
shade tolerance, Forest Ecol. Manag., 327, 189–200, 2014.
Lindner, M., Maroschek, M., Netherer, S., Kremer, A., Barbati, A.,
Garcia-Gonzalo, J., Seidl, R., Delzon, S., Corona, P., Kolström, M.,
Lexer, M. J., and Marchetti, M.: Climate change impacts, adaptive capacity,
and vulnerability of European forest ecosystems, Forest Ecol. Manag., 259,
698–709, 2010.
Lindner, M., Fitzgerald, J. B., Zimmermann, N. E., Reyer, C., Delzon, S., van
der Maaten, E., Schelhaas, M.-J. Lasch, P., Eggers, J., van der
Maaten-Theunissen, M., Suckow, F., Psomas, A., Poulter, B., and Hanewinkel,
M.: Climate change and European forests: What do we know, what are the
uncertainties, and what are the implications for forest management? J.
Environ. Manage., 146, 69–83, 2014.
Lines, E. R., Zavala, M. A., Purves, D. W., and Coomes, D. A.: Predictable
changes in aboveground allometry of trees along gradients of temperature,
aridity and competition, Glob. Ecol. Biogeogr., 21, 1017–1028, 2012.
Mäkelä, A.: Implications of the pipe model theory on dry matter
partitioning and height growth in trees, J. Theor. Biol., 123, 103–120,
1986.
Mäkelä, A. and Valentine, H. T.: The ratio of NPP to GPP: evidence of
change over the course of stand development, Tree Physiol., 21, 1015–1030,
2001.
Manion, P. D.: Tree Disease Concepts, Prentice-Hall, Englewood Cliffs, NJ,
402 pp., 1981.
Maraun, D. and Widmann, M.: Statistical downscaling and bias correction for
climate research, Cambridge University Press, Cambridge, 2018.
Mellert, K. H. and Göttlein, A.: Comparison of new foliar nutrient
thresholds derived from van den Burg's literature compilation with
established central European references, Eur. J. Forest Res., 131, 1461–1472,
2012.
Messier, C., Puettmann, K., Chazdon, R., Andersson, K. P., Angers, V. A.,
Brotons, L., Filotas, E., Tittler, R., Parrrott, L., and Levin, S. A.: From
management to stewardship: viewing forests as complex adaptative systems in
an uncertain world, Conserv. Lett., 8, 368–377, 2015.
Monteith, J. L.: Climate and the efficiency of crop production in Britain,
Philos. Trans. Royal Soc. B, 281, 277–294, 1977.
Morales, P., Hickler, T., Rowell, D. P., Smith, B., and Sykes, M. T.: Changes
in European ecosystem productivity and carbon balance driven by regional
climate model output, Global Change Biol., 13, 108–122, 2007.
Oliver, T. H., Heard, M. S., Isaac, N. J. B., Roy, D. B., Procter, D., Eigenbrod, F., Freckleton, R., Hector, A., Orme, C. D. L., Petchey, O. L., Proença, V., Raffaelli, D., Suttle, K. B., Mace, G. M., Martín López, B., Woodcock, B. A., and Bullock, J. M.: Biodiversity and resilience of ecosystem
functions, Trends Ecol Evol., 30, 673–684, 2015.
Penning de Vries, F. W. T.: The cost of maintenance processes in plant cells,
Ann. Bot., 39, 77–92, 1975.
Pretzsch, H.: Canopy space filling and tree crown morphology in mixed-species
stands compared with monocultures, Forest Ecol. Manag., 327, 251–264, 2014.
Pretzsch, H., Forrester, D. I., and Rötzer, T.: Representation of species
mixing in forest growth models, A review and perspective, Ecol. Model., 313,
276–292, 2015.
R Core Team: R: A language and environment for statistical computing, 2013.
Reyer, C., Lasch-Born, P., Suckow, F., Gutsch, M., Murawski, A., and Pilz,
T.: Projections of regional changes in forest net primary productivity for
different tree species in Europe driven by climate change and carbon
dioxide, Ann. Forest Sci., 71, 211–225, 2014.
Rodríguez-Calcerrada, J., Martin-St. Paul, N. K., Lempereur, M., Ourcival, J. M., del Carmen del Rey, M., Joffre, R., and Rambal, S.: Stem CO2 efflux and its contribution to ecosystem CO2 efflux decrease with drought in a Mediterranean forest stand, Agr. Forest Meteorol., 195–196, 61–72, 2014.
Rodríguez-Calcerrada, J., López, R., Salomón, R., Gordaliza,
G. G., Valbuena-Carabaña, M., Oleksyn, J., and Gil, L.: Stem CO2
efflux in six co-occurring tree species: underlying factors and ecological
implications, Plant Cell Environ., 38, 1104–1115, 2015.
Rötzer, T., Liao, Y., Goergen, K., Schüler, G., and Pretzsch, H.:
Modelling the impact of climate change on the productivity and water-use
efficiency of a central European beech forest, Clim. Res., 58, 81–95, 2013.
Ryan, M. G.: Effects of climate change on plant respiration, Ecol. Appl., 1,
157–167, 1991.
Ryan, M. G. and Yoder, B. J.: Hydraulic limits to tree height and tree growth.
What keeps trees from growing beyond a certain height? BioScience, 47,
235–242, 1997.
Schäfer, K. V. R., Oren, R., and Tenhunen, J. D.: The effect of tree height on crown level stomatal conductance, Plant Cell Environ., 23, 365–375,
2000.
Schwalm, C. R. and Ek, A. R.: A process-based model of forest ecosystems
driven by meteorology, Ecol. Model., 179, 317–348, 2004.
Simioni, G., Marie, G., and Huc, R.: Influence of vegetation spatial
structure on growth and water fluxes of a mixed forest: Results from the
NOTG 3D model, Ecol. Model., 328, 119–135, 2016.
Teh, C. B. S.: Introduction to mathematical modeling of crop growth. How the
equations are derived and assembled into a computer program, Brown Walker
Press, Boca Raton, Florida, USA, 2006.
Tetens, O.: Uber einige meteorologische Begriffe, Z. Geophys., 6, 297–309,
1930.
Thompson, I., Mackey, B., McNulty, S., and Mosseler, A.: Forest resilience,
biodiversity, and climate change. A synthesis of the
biodiversity/resilience/stability relationship in forest ecosystems.
Secretariat of the Convention on Biological Diversity, Montreal, Technical
Series no. 43, 2009.
Thurm, E. A., Biber, P., and Pretzsch, H.: Stem growth is favored at expenses
of root growth in mixed stands and humid conditions for Douglas-fir
(Pseudotsuga menziesii) and European beech (Fagus sylvatica), Trees-Struct.
Funct., 31, 349–365, 2017.
Trouvé, R., Bontemps, J. D., Seynave, I., Collet, C., and Lebourgeois,
F.: Stand density, tree social status and water stress influence allocation
in height and diameter growth of Quercus petraea (Liebl.), Tree Physiol., 35, 1035–1046,
2015.
Van Wijk, W. R. and De Vries, D. A.: Periodic temperature variations in a
homogenous soil, in: Physics of Plant Environment, edited by: Van Wijk, W. R., North Holland Publishing Company, Amsterdam, 1963.
Villar, R., Held, A. A., and Merino, J.: Dark leaf respiration in light and
darkness of an evergreen and a deciduous plant species, Plant Physiol., 107,
421–427, 1995.
Voldoire, A., Sanchez-Gomez, E., Salas y Mélia, D., Decharme, B.,
Cassou, C., Sénési, S., Valcke, S., Beau, I., Alias, A., Chevallier,
M., Déqué, M., Deshayes, J., Douville, H., Fernandez, E., Madec, G.,
Maisonnave, E., Moine, M. P., Planton, S., Saint-Martin, D., Szopa, S.,
Tyteca, S., Alkama, R., Belamari, S., Braun, A., Coquart, L., and Chauvin,
F.: The CNRM-CM5.1 global climate model: description and basic evaluation,
Clim. Dynam., 40, 2091–2121, 2013.
Vose, J. M. and Bolstad, P. V.: Challenges to modelling NPP in diverse eastern deciduous forests: species-level comparisons of foliar respiration responses to temperature and nitrogen, Ecol. Model., 122, 165–174, 1999.
Yamori, W., Hikosaka, K., and Way, D. A.: Temperature response of
photosynthesis in C3, C4, and CAM plants: temperature acclimation and
temperature adaptation, Photosynth. Res., 119, 101–117, 2013.
Short summary
To explore the forest response to new forestry practices under a changing environment, one needs models combining a process-based approach with a detailed spatial representation, which is very rare. We decided to develop our own model according to a spatially explicit approach describing individual tree growth based on resource sharing (light, water and nutrients). A first evaluation showed that HETEROFOR predicts well individual radial growth and is able to reproduce size–growth relationships.
To explore the forest response to new forestry practices under a changing environment, one needs...
