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  <front>
    <journal-meta><journal-id journal-id-type="publisher">GMD</journal-id><journal-title-group>
    <journal-title>Geoscientific Model Development</journal-title>
    <abbrev-journal-title abbrev-type="publisher">GMD</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Geosci. Model Dev.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1991-9603</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/gmd-13-905-2020</article-id><title-group><article-title>HETEROFOR 1.0: a spatially explicit model for exploring the response
of structurally complex forests to uncertain future conditions – Part 1: Carbon fluxes and tree dimensional growth</article-title><alt-title>HETEROFOR 1.0 – Part 1</alt-title>
      </title-group><?xmltex \runningtitle{HETEROFOR 1.0 -- Part 1}?><?xmltex \runningauthor{M. Jonard et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Jonard</surname><given-names>Mathieu</given-names></name>
          <email>mathieu.jonard@uclouvain.be</email>
        <ext-link>https://orcid.org/0000-0002-9680-792X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>André</surname><given-names>Frédéric</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-8274-4593</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>de Coligny</surname><given-names>François</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>de Wergifosse</surname><given-names>Louis</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Beudez</surname><given-names>Nicolas</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Davi</surname><given-names>Hendrik</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Ligot</surname><given-names>Gauthier</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Ponette</surname><given-names>Quentin</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Vincke</surname><given-names>Caroline</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Earth and Life Institute, Université catholique de Louvain,
Louvain-la-Neuve, 1348, Belgium</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>AMAP, Univ Montpellier, CIRAD, CNRS, INRAE, IRD, 34000 Montpellier,
France</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Ecologie des Forêts Méditerranéennes (URFM), Institut National de la Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Avignon, 84914, France</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Gembloux Agro-Bio Tech, Université de Liège, Gembloux, 5030, Belgium</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Mathieu Jonard (mathieu.jonard@uclouvain.be)</corresp></author-notes><pub-date><day>5</day><month>March</month><year>2020</year></pub-date>
      
      <volume>13</volume>
      <issue>3</issue>
      <fpage>905</fpage><lpage>935</lpage>
      <history>
        <date date-type="received"><day>12</day><month>April</month><year>2019</year></date>
           <date date-type="rev-request"><day>12</day><month>June</month><year>2019</year></date>
           <date date-type="rev-recd"><day>20</day><month>January</month><year>2020</year></date>
           <date date-type="accepted"><day>27</day><month>January</month><year>2020</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2020 Mathieu Jonard et al.</copyright-statement>
        <copyright-year>2020</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://gmd.copernicus.org/articles/13/905/2020/gmd-13-905-2020.html">This article is available from https://gmd.copernicus.org/articles/13/905/2020/gmd-13-905-2020.html</self-uri><self-uri xlink:href="https://gmd.copernicus.org/articles/13/905/2020/gmd-13-905-2020.pdf">The full text article is available as a PDF file from https://gmd.copernicus.org/articles/13/905/2020/gmd-13-905-2020.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e174">Given the multiple abiotic and biotic stressors resulting from global
changes, management systems and practices must be adapted in order to
maintain and reinforce the resilience of forests. Among others, the
transformation of monocultures into uneven-aged and mixed stands is an
avenue to improve forest resilience. To explore the forest response to these new silvicultural practices under a changing environment, one needs models combining a process-based approach with a detailed spatial representation, which is quite rare.</p>
    <p id="d1e177">We therefore decided to develop our own model (HETEROFOR for HETEROgeneous
FORest) according to a spatially explicit approach, describing individual
tree growth based on resource sharing (light, water and nutrients).
HETEROFOR was progressively elaborated within Capsis (Computer-Aided
Projection for Strategies in Silviculture), a collaborative modelling
platform devoted to tree growth and stand dynamics.</p>
    <p id="d1e180">This paper describes the carbon-related processes of HETEROFOR
(photosynthesis, respiration, carbon allocation and tree dimensional growth) and evaluates the model performances for three broadleaved stands with different species compositions (Wallonia, Belgium). This first evaluation
showed that HETEROFOR predicts well individual radial growth (Pearson's
correlation of 0.83 and 0.63 for the European beech and sessile oak,
respectively) and is able to reproduce size–growth relationships. We also
noticed that the net to gross primary production (npp to gpp) ratio option for describing maintenance
respiration provides better results than the temperature-dependent routine,
while the process-based (Farquhar model) and empirical (radiation use
efficiency) approaches perform similarly for photosynthesis. To illustrate
how the model can be used to predict climate change impacts on forest
ecosystems, we simulated the growth dynamics of the mixed stand driven by
three IPCC climate scenarios. According to these simulations, the tree growth trends will be governed by the <inline-formula><mml:math id="M1" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fertilization effect, with the increase in vegetation period length and the increase in water stress also playing a role but offsetting each other.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e203">Forest structure and composition result from soil and climate conditions,
management, and natural disturbances. All of these drivers of forest ecosystem
functioning are rapidly evolving due to global changes (Aber et al., 2001;
Lindner et al., 2010; Campioli et al., 2012). While environmental and
societal changes are taking place and will continue to happen in the future,
their magnitude and the way they will occur locally remain largely uncertain
(Lindner et al., 2014). Designing silvicultural systems and selecting tree
species<?pagebreak page906?> adapted to future conditions seem therefore to be risky bets (Ennos et
al., 2019). Messier et al. (2015) proposed another vision of the forests in which they are
considered as complex adaptive systems whose future dynamics are inherently
uncertain. To maintain the ability of forests to provide a large range of
goods and services in whatever future conditions, their resilience and
adaptability must be improved by favouring an uneven-aged structure and tree
species mixture (Thompson et al., 2009; Oliver et al., 2015). As the
combinations of site conditions, climate projections, stand structures and
tree species compositions are nearly infinite, all of the management options
that could potentially enhance the resilience and adaptive capacity of
forests cannot be tested in situ (Cantarello et al., 2017). Furthermore,
such silvicultural trials provide results only for the long run, given the
life span of trees, and cannot anticipate future conditions. Scenario
analyses based on model simulations are therefore useful for selecting the most
promising management strategies and evaluating their long-term
sustainability. To explore the forest response to new silvicultural practices
and yet unexperienced climate conditions in a realistic way, one needs new
process-based models that are able to deal with mixed and structurally complex stands
and to incorporate uncertainties in future conditions (Berger et al., 2008;
Bravo et al., 2019).</p>
      <p id="d1e206">In connection with the traditional forestry, viewing forests as stable
systems that can be controlled, many empirical models were developed to
predict tree growth in monocultures, considering that past conditions will
remain unchanged in the future. On the other hand, scientists developed
process-based ecophysiological models to better understand the short- and
long-term forest ecosystem responses to multiple and interacting
environmental changes (Dufrêne et al., 2005). This can indeed not be
done through direct experimentation because the multisite and multifactorial
experiments required for doing so would be too complex and too expensive
(Aber et al., 2001; Boisvenue and Running, 2006). Most experiments of
environment manipulation focus on single or few factors during a limited
period of time, which precludes to properly take into account interactions,
feedbacks and acclimation. To simplify the mathematical formalization of
ecophysiological processes (e.g. radiation interception) and limit the
calculation time, these process-based models were first designed for pure
even-aged stands without considering the spatial heterogeneity of stand
structure.</p>
      <p id="d1e209">With the increasing interest in uneven-aged stands and tree species
mixtures, cohort and tree-level models were also developed. Pretzsch et al. (2015) reviewed 54 forest growth models to show how they represent species
mixing. Among those models, 36 were process-based with nine at the stand, 11 at
the cohort and 16 at the tree level. While cohort models allow a description of
the vertical structure of the stand, tree-level models are generally
necessary to consider the spatial heterogeneity in the horizontal
dimensions. To represent stand structure in three dimensions, the model must
not only operate at the individual level but also consider the tree
position. In the review of Pretzsch et al. (2015), 11 process-based models
were individual-based and spatially explicit, but only three of them
accounted simultaneously for radiation transfer, water cycling and phenology
(i.e. BALANCE, EMILION and MAESPA). Since it describes canopy and water
balance processes using a state-of-the-art approach (based on a fine crown
discretization), MAESPA is a very useful tool for analysing outcomes of
ecophysiological experiments (Duursma and Medlyn, 2012). MAESPA is however
not suitable for multiyear simulations since it contains no routine for
carbon allocation, respiration and tree dimensional growth. EMILION is also
restricted to 1-year simulation (no organ emergence) and is specific to
pine species with a quite detailed structural approach (Bosc et al., 2000).
In contrast, tree dimensional growth is well described in BALANCE, which
possesses a fine representation of tree structure (Grote and Pretzsch,
2002). In BALANCE, radiation interception by trees and water cycling are
based on simpler ecophysiological concepts compared to MAESPA, and
photosynthesis is calculated with a 10 d time step using the routine of
Haxeltine and Prentice (1996). As the Forest v5.1 model (Schwalm and Ek,
2004), BALANCE has the advantage of merging two traditions, conventional
growth and yield models together with process-based approaches, providing
outputs familiar to foresters (classical tree and stand measurements
obtained from forest inventory) as well as carbon fluxes and stocks. Among
the three models, BALANCE is the only one that considers mineral nutrition
through the impact of nitrogen (N) availability on tree growth. Some soil
chemistry processes (e.g. ion exchange or mineral weathering) are however not
described although they are essential to estimate bioavailability of the
major nutrients other than N (P, K, Mg and Ca). Not considered in the review of
Pretzsch et al. (2015), iLand is another individual-based model that describes
the ecophysiological processes with an intermediate level of detail using
simplified ecophysiological concepts (such as the radiation use efficiency
approach) in order to also simulate forest dynamics at the landscape scale.
Later, Simioni et al. (2016) developed the NOTG 3-D model to study water and
carbon fluxes in Mediterranean forests using an individual-based approach to
account for the spatial structure of the stand. This model is more suited
for short-term simulations (a few years) than long-term (a rotation) simulations
since tree dimensions are updated based on fixed empirical relationships
between diameter at breast height (dbh) and tree height or crown radius.</p>
      <p id="d1e212">As the models accounting for both the functional and spatial complexity are
rare, we developed a new model (HETEROFOR) using a spatially explicit
approach to describe individual tree growth based on resource use (light,
water and nutrients) in heterogeneous forests. While the BALANCE and iLand
models existed and responded roughly to our expectations, we decided to build
a new model for several reasons. First, we thought that another model of
this particular type would not be redundant if it was based on other<?pagebreak page907?> concepts.
Instead of calculating an index of light availability, we chose to estimate
radiation interception for all trees using a ray tracing approach. For
calculating photosynthesis and tree transpiration, we selected the Farquhar
model with a shorter time step than in BALANCE in order to account for hourly
variations in climate and soil water conditions. While we used a slightly
more complex approach for the water balance module (Darcy approach instead
of bucket model for soil water dynamics and rainfall partitioning when passing
through the canopy), our model rests on a simpler representation of tree
structure than BALANCE. Second, we aimed at incorporating a detailed tree
nutrition and nutrient cycling module since we realized the necessity to
integrate nutritional constraints in forest growth modelling, especially for
predicting the response to climate change (Fernandez-Martinez et al., 2014;
Jonard et al., 2015). Finally, we wanted to develop the model within the
frame of a collaborative modelling platform dedicated to tree growth and
stand dynamics. Among the various platforms, Capsis was the only one
allowing multimodel integration and providing a user-friendly interface
(Dufour-Kowalski et al., 2012). HETEROFOR was therefore progressively
elaborated through the integration of various modules (light interception,
phenology, water cycling, photosynthesis and respiration, carbon allocation,
mineral nutrition, and nutrient cycling) within Capsis. The advantage of such
a platform is to use common development environment, model execution system,
user interface and visualization tools and to share data structures,
objects, methods and libraries.</p>
      <p id="d1e216">To simulate the response of forests to management and changing environmental
conditions, structuring and integrating the existing knowledge into the
process-based models is essential but not sufficient. These models must also
be documented and evaluated in order to know exactly their strengths and
limits when analysing their outputs. The objectives of this paper are to (i) describe the carbon-related processes of HETEROFOR (photosynthesis,
respiration, carbon allocation and tree dimensional growth), (ii) evaluate
the model ability in reconstructing tree growth in three broadleaved stands
of different species composition and compare various options for describing
photosynthesis, respiration and crown extension, and (iii) illustrate its
potentialities by simulating tree growth dynamics in an oak and beech stand
under various IPPC (Intergovernmental Panel on Climate Change) climate scenarios.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Materials and methods</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Overall operation of the HETEROFOR model</title>
      <p id="d1e234">HETEROFOR is a model integrated in the Capsis (Computer-Aided Projection for
Strategies in Silviculture) platform, which is dedicated to forest growth and dynamics
modelling (Dufour-Kowalski et al., 2012). HETEROFOR uses the Capsis
execution system and its methods to run simulations and display the results.
When running simulations with HETEROFOR, Capsis creates a new project in
which the variables that describe the forest state are stored at a yearly time
step, starting from the initial forest characteristics (initial step). Some
variables (foliage state, water fluxes, npp and gpp) are stored at an hourly
or daily time step in java objects created annually. This information is
accessible to the user through exports (see user manual in the Supplement). Though some data
structures and methods are shared with other models integrated in Capsis,
the initialization and evolution procedures are specific to HETEROFOR.</p>
      <p id="d1e237">For the initialization, HETEROFOR loads a series of files containing tree
species parameters, input data on trees (location, dimensions and chemistry),
soil (chemical and physical properties) and open-field hourly meteorological
data. These data are used to create trees and soil horizons at the initial
step. The tree is divided in three structural compartments (branch, stem and
root) and three functional ones (leaf, fine root and fruit). Then, HETEROFOR
predicts tree growth at a yearly time step based on underlying processes
modelled at finer time steps and at different spatial levels.</p>
      <p id="d1e240">After the initialization step and at the end of each successive yearly time
step, the phenological periods for each deciduous species (leaf development,
leaf colouring and shedding) are defined for the next step from
meteorological data. When no hourly meteorological measurements are
available, the vegetation period is defined by the user who provides the
budburst and the leaf shedding dates. Knowing the key phenological dates and
the rates of leaf expansion, colouring and falling, the foliage state of the
deciduous species is predicted with a daily time step during the year (de
Wergifosse et al., 2019). It is characterized by the proportions of
leaf biomass and of green leaves relative to complete leaf development,
which are key variables in the simulation of energy, water and carbon fluxes within
the forest ecosystem. The proportion of green leaves impacts photosynthesis,
leaf respiration and tree transpiration, as these processes are not active
anymore on discoloured leaves, which however still intercept solar radiation
and rainfall. Based on a ray tracing approach, the SamsaraLight library of
Capsis (Courbaud et al., 2003) calculates the proportions of solar radiation
absorbed by the trunk and the crown of each individual tree and the
radiation transmitted to the ground on average over the whole vegetation
period (simplified radiation budget) or hourly for several key dates
(detailed radiation budget). Predicting how solar energy is distributed
within the forest ecosystem is necessary to estimate foliage, bark and soil
evaporation, tree transpiration, and leaf photosynthesis.</p>
      <p id="d1e243">Every hour, HETEROFOR performs a water balance and updates the water content
of each horizon. Rainfall is partitioned into throughfall, stemflow and
interception (André et al., 2008a, b, 2011). Part of the rainfall directly
reaches the ground (throughfall), while the rest is intercepted by
foliage and bark. They both have a certain water storage capacity which is
regenerated by evaporation. When the foliage is<?pagebreak page908?> saturated, the overflow
joins the throughfall flux whose proportion increases. As the bark
saturates, water flows along the trunk to form stemflow. Throughfall and
stemflow supply the first soil horizon (forest floor) with water, while soil
evaporation and root uptake deplete it. The water evaporation from the soil
(as well as from the foliage and the bark) is calculated with the
Penman–Monteith equation based on the solar radiation absorbed by each
component. Using the same equation, individual tree transpiration is
estimated by determining the stomatal conductance from tree characteristics,
soil water potential and meteorological conditions. The distribution of root
water uptake among the soil horizons is done according to the soil water
potential and the vertical distribution of fine roots. Water exchanges
between soil horizons are considered as water inputs (capillary rise) or
outputs (drainage). These soil water transfers are calculated based on the
soil water potential gradient according to the Darcy law and using
pedotransfer functions to determined soil hydraulic properties. By default,
HETEROFOR calculates the water fluxes at the stand scale by aggregating
individual fluxes (i.e. tree transpiration) or tree properties (e.g. foliage
and bark capacity or stemflow proportion). With this option, all trees
take up water in the same soil horizons, assuming that soil water is
redistributed homogeneously between two hourly time steps. However, the user
can choose an alternative option to calculate all of the water fluxes at the
individual level. In this case, the model distributes the total soil volume
in individual soil volumes (called pedons) and performs a water balance for
each one. Contrary to the default option, assuming a homogeneous horizontal
water redistribution, the alternative option supposes no water
redistribution among pedons (de Wergifosse et al., 2019).</p>
      <p id="d1e247">The user can choose to calculate the gross primary production of each tree
(gpp) either based on a radiation use efficiency approach distinguishing sunlit
and shaded leaves (yearly time step) or using the Farquhar et al. (1980)
model (hourly time step). The latter is analytically coupled to the stomatal
conductance model proposed by Ball et al. (1987). The photosynthesis is
computed using the library CASTANEA that is also present in Capsis (Dufrêne et
al., 2005). This calculation requires the proportions of sunlit and shaded
leaves, the direct and diffuse photosynthetically active radiation (PAR)
absorbed per unit leaf area, and the mean soil water potential. At the end of
the vegetation period, gpp is converted to net primary production (npp) after the
subtraction of growth and maintenance respiration. Maintenance respiration
is either considered as a proportion of gpp (depending on the crown to stem
diameter ratio) or calculated hourly for each tree compartment by
considering the living biomass, the nitrogen concentration and a <inline-formula><mml:math id="M2" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
function for the temperature dependency following Ryan (1991) as in
Dufrêne et al. (2005). Carbon allocation is done once a year at the end
of the vegetation period, which allows an update of the tree dimensions for the next
yearly time step, during which tree size does not change. Allocation of carbon
to foliage and fine roots is prioritized and carried out by ensuring a functional balance
between carbon fixation and nutrient uptake through a fine root to leaf
biomass ratio that depends on the tree nutritional status (Helmisaari et al.,
2007). Allometric relationships are then used to describe carbon allocation
to structural components (trunk, branches and structural roots) and to
derive tree dimensional growth (diameter at breast height, total height,
height to crown base, height of maximum crown extension and crown radii in four
directions) while considering competition with neighbouring trees (Fig. 1).</p>
      <p id="d1e261">Knowing the chemical composition of the tree compartments for a given tree
nutrient status, HETEROFOR computes the individual tree nutrient
requirements based on the estimated annual growth rate and deduces the tree
nutrient demand after a subtraction of the amount of retranslocated
nutrients. In parallel, the potential nutrient uptake (soil nutrient supply)
is obtained by calculating the maximum rate of ion transport towards the
roots (by diffusion and mass flow). The actual uptake is then determined by
adjusting the tree nutrient status and growth rate so that tree nutrient
demand matches soil nutrient supply. The nutrient limitation of tree growth
is achieved through the regulation of photosynthesis, maintenance
respiration and through the effect of the tree nutrient status on fine root
allocation.</p>
      <p id="d1e264">The soil chemistry is characterized at the tree or stand scale for the
various soil horizons defined by the user. In each soil horizon, the
chemical composition of the soil solution is in equilibrium with the
exchange complex and the secondary minerals. Soil receives nutrients
coming from atmospheric deposition, organic matter mineralization and
primary mineral weathering and is depleted by root uptake and
immobilization in microorganisms. The chemical equilibrium within the soil
solution, with the exchange complex or the minerals, is updated yearly with
the PHREEQC geochemical model (Charlton and Parkhurst, 2011) coupled to
HETEROFOR through a dynamic link library.</p>
      <p id="d1e267">In this paper, we present a detailed description of the processes regulating
the carbon fluxes (Fig. 1), while the phenology and water balance modules are
presented in a companion paper (de Wergifosse et al., 2019) and the
nutrient cycling and tree nutrition module will be described later in a
third paper.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><label>Figure 1</label><caption><p id="d1e272">Conceptual diagram of the HETEROFOR model. The incident PAR radiation is absorbed by individual trees using a ray-tracing model (SamsaraLight library). Then, the absorbed PAR (aPAR) is converted into gross primary production (gpp) based on the PAR use efficiency concept (first option) or with a biochemical
model of photosynthesis (second option). The photosynthesis calculation
depends on the soil water potential, which is updated hourly thanks to the
water balance module described in detail in de Wergifosse et al. (2019). The net primary production (npp) is obtained using a npp to gpp ratio or by
subtracting the growth and maintenance respiration (the latter being
temperature dependent). npp is first allocated to foliage using an allometric
equation function of tree diameter (dbh) and crown radius (cr). All of these
processes (radiation interception, photosynthesis, respiration and
evapotranspiration) depend on the foliage development stage, which is
determined based on the phenology module. The carbon allocated to fine roots
is determined based on a fine root-to-foliage ratio, dependent on the tree
nutritional status. Fruit production is calculated with an allometric
equation based on dbh and on light availability. The remaining carbon is
allocated to structural compartments (roots, trunk and branches) using a
fixed proportion for the below-ground part. dbh and height growth (<inline-formula><mml:math id="M3" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>dbh and <inline-formula><mml:math id="M4" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula>) are deduced from the change in aboveground biomass by deriving
and rearranging an allometric equation. Finally, crown extension is
predicted with a distance-dependent or distance-independent approach.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/905/2020/gmd-13-905-2020-f01.png"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Detailed model description</title>
<sec id="Ch1.S2.SS2.SSS1">
  <label>2.2.1</label><title>Initialization</title>
      <p id="d1e313">To initialize HETEROFOR, the relative position (<inline-formula><mml:math id="M5" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M6" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M7" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>) and the main
dimensions of each tree must be provided, including the following: girth at breast height (gbh; in centimetres), height (<inline-formula><mml:math id="M8" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula>; in metres), height of maximum crown extension (hlce; in metres), height to crown base (hcb; in metres) and crown radii in the four cardinal directions (cr; in metres). During the initialization phase, the biomass of each tree compartment is calculated according to the equations<?pagebreak page909?> used for carbon allocation (see Sect. 2.2.4. If
available, site-specific allometric equations can also be used to calculate
initial biomasses of tree compartments. When data on fruit litterfall are
available, a file providing the amount of fruit litterfall per year and per
tree species can be loaded and used to adapt the allometric equations
predicting fruit production at the individual level. When the water balance
module is activated, two additional files must be loaded, including a file describing
soil horizon properties and another one for the hourly meteorology. Finally,
the user must provide the nutrient concentrations of the current leaves (N,
P, K, Ca and Mg) for each tree species. These foliar concentrations are then
used to estimate the tree nutrient status for each major nutrient. When the
tree nutrition and nutrient cycling module is not activated, these
concentrations are kept constant throughout the simulation.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS2">
  <label>2.2.2</label><title>Gross primary production</title>
      <p id="d1e352">The annual gross primary production of each tree (gpp; in kilograms of C per year) is
calculated either based on a PAR use efficiency (PUE) approach (Monteith, 1977) or
using the photosynthesis method of the CASTANEA model (Dufrêne et al.,
2005). For the first option, the only input needed by the model is the mean
monthly global radiation. The second option requires hourly meteorological
data and the activation of the water balance calculation. In any case, a
series of intermediate variables are needed to calculate gpp.</p>
      <p id="d1e355">For the PUE approach, the model uses the solar radiation absorbed by each tree
during the vegetation period (aRAD; in megajoules per year); aRAD is then converted in PAR (aPAR; in moles of photons per year) by supposing that 46 % of the solar radiation
(RAD) is PAR and 1 MJ is equivalent to 4.55 moles of photons. The diffuse and
direct components of aPAR are also considered (aPAR<inline-formula><mml:math id="M9" display="inline"><mml:msub><mml:mi/><mml:mtext>diff</mml:mtext></mml:msub></mml:math></inline-formula> and aPAR<inline-formula><mml:math id="M10" display="inline"><mml:msub><mml:mi/><mml:mtext>dir</mml:mtext></mml:msub></mml:math></inline-formula>; in moles of photons per year). While all of the leaves receive diffuse PAR, only sunlit
leaves absorb direct PAR. To estimate the sunlit-leaf proportion
(Prop<inline-formula><mml:math id="M11" display="inline"><mml:msub><mml:mi/><mml:mtext>sl</mml:mtext></mml:msub></mml:math></inline-formula>) at the tree level, HETEROFOR uses an adaptation of the classical
stand-scale approach based on the Beer–Lambert law (Teh, 2006):
              <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M12" display="block"><mml:mrow><mml:msub><mml:mtext>Prop</mml:mtext><mml:mtext>sl</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi>exp⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:mo>-</mml:mo><mml:mi>k</mml:mi><mml:mo>⋅</mml:mo><mml:mtext>LAI</mml:mtext></mml:mrow></mml:mfenced></mml:mrow><mml:mi>k</mml:mi></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            with <inline-formula><mml:math id="M13" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula>, the extinction coefficient, and LAI, the leaf area index (in square metres per square metre).</p>
      <p id="d1e428">At the individual scale, the leaf area index is calculated by dividing the
tree leaf area (<inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in square metres) by the crown projection area (cpa; in square metres). The value obtained is then multiplied by the light
competition index (LCI; in megajoules per megajoule) to account for the shading effect of
the neighbouring trees as follows:
              <disp-formula id="Ch1.E2" content-type="numbered"><label>2</label><mml:math id="M15" display="block"><mml:mrow><mml:msub><mml:mtext>Prop</mml:mtext><mml:mtext>sl</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi>exp⁡</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mo>-</mml:mo><mml:mi>k</mml:mi><mml:mo>⋅</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow><mml:mtext>cpa</mml:mtext></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow><mml:mi>k</mml:mi></mml:mfrac></mml:mstyle><mml:mo>⋅</mml:mo><mml:mtext>LCI</mml:mtext><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
           <?pagebreak page910?> where LCI is the ratio between the absorbed radiation calculated with and
without neighbouring trees in SamsaraLight. LCI ranges from 0 (no light reaching the tree) to 1 (no light competition).</p>
      <p id="d1e490">To adapt the PAR use efficiency (PUE) concept at the tree level, we considered a distinct PUE for sunlit (sl) and shaded (sh) leaves and calculated an average PUE weighted as follows:
              <disp-formula id="Ch1.E3" content-type="numbered"><label>3</label><mml:math id="M16" display="block"><mml:mtable rowspacing="0.2ex" columnspacing="1em" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mtext>pue</mml:mtext><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><?xmltex \hack{\hbox\bgroup\fontsize{9.5}{9.5}\selectfont$\displaystyle}?><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mtext>aPAR</mml:mtext><mml:mtext>diff</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mtext>Prop</mml:mtext><mml:mtext>sl</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mtext>PUE</mml:mtext><mml:mtext>sl</mml:mtext></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mtext>Prop</mml:mtext><mml:mtext>sh</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mtext>PUE</mml:mtext><mml:mtext>sh</mml:mtext></mml:msub></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:msub><mml:mtext>aPAR</mml:mtext><mml:mtext>dir</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mtext>PUE</mml:mtext><mml:mtext>sl</mml:mtext></mml:msub></mml:mrow><mml:mtext>aPAR</mml:mtext></mml:mfrac></mml:mstyle><?xmltex \hack{$\egroup}?><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
            This pue value is then used to calculate gpp based on aPAR and a reducer accounting for water
stress (<inline-formula><mml:math id="M17" display="inline"><mml:mrow><mml:msub><mml:mtext>red</mml:mtext><mml:mtext>water</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) as follows:
              <disp-formula id="Ch1.E4" content-type="numbered"><label>4</label><mml:math id="M18" display="block"><mml:mrow><mml:mtext>gpp</mml:mtext><mml:mo>=</mml:mo><mml:mtext>aPAR</mml:mtext><mml:mo>⋅</mml:mo><mml:mtext>pue</mml:mtext><mml:mo>⋅</mml:mo><mml:msub><mml:mtext>red</mml:mtext><mml:mtext>water</mml:mtext></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            The default value of <inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:msub><mml:mtext>red</mml:mtext><mml:mtext>water</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is 1, but, when the water balance module is activated, it is set to the ratio between the actual and the potential
(i.e. considering no soil water limitation) tree transpiration
(<inline-formula><mml:math id="M20" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mtext>actual</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mtext>pot</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in litres per year). This ratio estimates the
fraction of the vegetation period during which stomata are partially or
totally closed due to a limitation in soil water availability. Since this
ratio is always lower or equal to 1, a correction factor is applied to avoid
introducing a bias.
              <disp-formula id="Ch1.E5" content-type="numbered"><label>5</label><mml:math id="M22" display="block"><mml:mrow><mml:msub><mml:mtext>red</mml:mtext><mml:mtext>water</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mtext>actual</mml:mtext></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mtext>pot</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>⋅</mml:mo><mml:mtext>corr</mml:mtext><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            gpp can also be estimated using the photosynthesis method of CASTANEA
(Dufrêne et al., 2005). This method consists in the biochemical model of
Farquhar et al. (1980) analytically coupled with the approach of Ball et al. (1987) that linearly relates stomatal conductance to the product of the
carbon assimilation rate by the relative humidity. The slope of this
relationship varies between 0 and 1, with the soil water availability
characterized in HETEROFOR based on a decreasing exponential function of the
mean soil water potential (see eq. 55 in de Wergifosse et al., 2019).
The formulation of Ball et al. (1987) was slightly adapted to the tree level
by accounting for the influence of tree height. Indeed, leaf water potential
increases with leaf height and induces a decrease in stomatal conductance
(Ryan and Yoder, 1997; Schäfer et al., 2000). In eq. (55) in de Wergifosse
et al. (2019), stomatal conductance is inversely proportional to the
height of maximum crown extension.</p>
      <p id="d1e673">The photosynthesis routine requires, at an hourly time step, the direct and
diffuse PAR absorbed per unit leaf area. The direct PAR is intercepted only by sunlit leaves and is obtained by multiplying the hourly incident PAR (micromoles of photons per square metre per second) by the proportion of direct PAR absorbed by
sunlit leaves. For a tree, this proportion is fixed by default for the whole
vegetation period and calculated as the ratio between the direct PAR absorbed
per unit sunlit-leaf area during the vegetation period (in moles of photons per square metre per year) and the incident PAR accumulated over
the same period (in moles of photons per square metre per year). A
similar procedure is used for the diffuse absorbed PAR, except that it is
related to the total leaf area. When using the detailed version of
SamsaraLight, the proportions of direct/diffuse PAR absorbed per unit leaf area
change every hour during the day and depending on the phenological stage.
The photosynthesis routine of CASTANEA also requires the foliar nitrogen
concentration to estimate the maximal carboxylation rate (Dufrêne et
al., 2005).</p>
</sec>
<sec id="Ch1.S2.SS2.SSS3">
  <label>2.2.3</label><title>Growth and maintenance respiration</title>
      <?pagebreak page911?><p id="d1e684">The value of gpp is converted to annual net primary production (npp; in kilograms of C per year) using
either a ratio depending on the crown to stem diameter ratio (Eq. 6) or, after subtraction of growth (gr) and maintenance respiration (mr) (Eq. 7),
according to the theory of respiration developed by Penning de Vries (1975).

                  <disp-formula specific-use="align" content-type="numbered"><mml:math id="M23" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E6"><mml:mtd><mml:mtext>6</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mtext>npp</mml:mtext><mml:mo>=</mml:mo><mml:mtext>gpp</mml:mtext><mml:mo>⋅</mml:mo><mml:msub><mml:mi>r</mml:mi><mml:mtext>npp_gpp</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:mtext>DdIndex</mml:mtext><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E7"><mml:mtd><mml:mtext>7</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mtext>npp</mml:mtext><mml:mo>=</mml:mo><mml:mtext>gpp</mml:mtext><mml:mo>-</mml:mo><mml:mtext>mr</mml:mtext><mml:mo>-</mml:mo><mml:mtext>gr</mml:mtext></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

              Mäkelä and Valentine (2001) showed that the npp to gpp ratio changes with
some tree characteristics (tree height and age). Based on simulated gpp and
npp reconstructed by using the model in reverse mode (see Sect. 2.2.7), we
tested the impact of several variables characterizing tree dimensions and
shape (height, dbh, crown radius, crown volume, crown to stem diameter ratio, and aboveground volume or biomass) on the npp to gpp ratio. The best relationship was obtained with the crown to stem diameter ratio (Dd; in metres per metre), which had a negative effect on the npp to gpp ratio. This indicates that the proportion of gpp lost by respiration increases for trees with a large crown. Unfortunately, the crown to stem diameter ratio not only varies with the tree shape reflecting past competition conditions but also changes during the course of the tree development for some tree species. Therefore, we standardized it to remove the size effect in order to obtain an index (DdIndex) that only characterizes the tree shape. This index is particularly useful in accounting for the large differences in the oak crown extensions according to the silvicultural system (large crowns in former coppices with standards vs. narrow crowns in dense high forests).
              <disp-formula id="Ch1.E8" content-type="numbered"><label>8</label><mml:math id="M24" display="block"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>npp_gpp</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mo>⋅</mml:mo><mml:mtext>DdIndex</mml:mtext><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M25" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M26" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> are parameters and DdIndex is defined
as
              <disp-formula id="Ch1.E9" content-type="numbered"><label>9</label><mml:math id="M27" display="block"><mml:mrow><mml:mtext>DdIndex</mml:mtext><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mtext>Dd</mml:mtext><mml:mrow><mml:msub><mml:mtext>Dd</mml:mtext><mml:mtext>pred</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            with Dd, the crown to stem diameter ratio determined from the tree mean crown radius (<inline-formula><mml:math id="M28" display="inline"><mml:mrow><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>mean</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in metres) and diameter at breast height (dbh; in metres), and <inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:msub><mml:mtext>Dd</mml:mtext><mml:mtext>pred</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, the crown to stem diameter ratio predicted based on the girth at breast height (gbh; in centimetres):
              <disp-formula id="Ch1.E10" content-type="numbered"><label>10</label><mml:math id="M30" display="block"><mml:mrow><mml:msub><mml:mtext>Dd</mml:mtext><mml:mtext>pred</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mo>⋅</mml:mo><mml:mi>g</mml:mi><mml:mi>b</mml:mi><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>⋅</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mtext>gbh</mml:mtext></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mi mathvariant="italic">δ</mml:mi><mml:mo>⋅</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msup><mml:mtext>gbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            In Eq. (7), maintenance respiration is calculated for each tree by summing
the maintenance respiration of each compartment, which is estimated from the nitrogen
content of its living biomass, and considering a <inline-formula><mml:math id="M31" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> function for the
temperature dependency. During daytime, the inhibition of foliage
respiration by light is taken into account by considering that this
inhibition reduces respiration by 62 % (Villar et al., 1995).
              <disp-formula id="Ch1.E11" content-type="numbered"><label>11</label><mml:math id="M32" display="block"><mml:mrow><mml:mtext>mr</mml:mtext><mml:mo>=</mml:mo><mml:msub><mml:mo>∑</mml:mo><mml:mtext>comp.</mml:mtext></mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>comp.</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mi>f</mml:mi><mml:mtext>living</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:mfenced close="]" open="["><mml:mtext>N</mml:mtext></mml:mfenced><mml:mo>⋅</mml:mo><mml:msub><mml:mi>R</mml:mi><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>ref</mml:mtext></mml:msub></mml:mrow></mml:msub><mml:mo>⋅</mml:mo><mml:msubsup><mml:mi>Q</mml:mi><mml:mtext>10_comp.</mml:mtext><mml:mstyle scriptlevel="+1"><mml:mfrac><mml:mrow><mml:mi>T</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mtext>ref</mml:mtext></mml:msub></mml:mrow><mml:mn mathvariant="normal">10</mml:mn></mml:mfrac></mml:mstyle></mml:msubsup></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            with <inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>comp.</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, the tree compartment biomass (kilograms of organic matter),
<inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mtext>living</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, the fraction of living biomass,
<inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mtext>N</mml:mtext><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>, the nitrogen concentration (in grams per kilogram),
<inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>ref</mml:mtext></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, the maintenance respiration per gram of N at the reference
temperature (15 <inline-formula><mml:math id="M37" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C), and <inline-formula><mml:math id="M38" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, the air temperature for aboveground tree compartments or the soil
horizon temperature for roots (see Appendix A). Root maintenance respiration
is estimated for each soil horizon separately.</p>
      <p id="d1e1031">The fraction of living biomass is fixed to 1 for leaves and fine roots or
equals the proportion of sapwood for the structural tree compartments. The
sapwood proportion is derived from the sapwood area (<inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>sapwood</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in
square centimetres), which is determined based on an empirical function of the tree
compartment diameter (<inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">∅</mml:mi><mml:mtext>comp.</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in centimetres) as follows:
              <disp-formula id="Ch1.E12" content-type="numbered"><label>12</label><mml:math id="M41" display="block"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>sapwood</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi>a</mml:mi><mml:mo>+</mml:mo><mml:mi>b</mml:mi><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="normal">∅</mml:mi><mml:mtext>comp.</mml:mtext></mml:msub><mml:mo>+</mml:mo><mml:mi>c</mml:mi><mml:mo>⋅</mml:mo><mml:msubsup><mml:mi mathvariant="normal">∅</mml:mi><mml:mtext>comp.</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            Growth respiration (gr) is the sum of the tree compartment growth respirations,
which are proportional to their biomass increments (see Sect. 2.2.4).
              <disp-formula id="Ch1.E13" content-type="numbered"><label>13</label><mml:math id="M42" display="block"><mml:mrow><mml:mtext>gr</mml:mtext><mml:mo>=</mml:mo><mml:msub><mml:mo>∑</mml:mo><mml:mtext>comp.</mml:mtext></mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mtext>gr</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>comp.</mml:mtext></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mtext>gr</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the growth respiration per unit biomass increment (in kilograms of C per kilogram of C).</p>
</sec>
<sec id="Ch1.S2.SS2.SSS4">
  <label>2.2.4</label><title>Carbon allocation and dimensional growth</title>
      <p id="d1e1150">For each tree, the npp and the carbon retranslocated from leaves and roots
(<inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:msub><mml:mtext>rt</mml:mtext><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M45" display="inline"><mml:mrow><mml:msub><mml:mtext>rt</mml:mtext><mml:mtext>fine root</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in kilograms of C per year) are distributed
among the various tree compartments at the end of the year. <inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:msub><mml:mtext>rt</mml:mtext><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M47" display="inline"><mml:mrow><mml:msub><mml:mtext>rt</mml:mtext><mml:mtext>fine root</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> are determined as follows:
              <disp-formula id="Ch1.E14" content-type="numbered"><label>14</label><mml:math id="M48" display="block"><mml:mtable rowspacing="0.2ex" columnspacing="1em" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mtext>rt</mml:mtext><mml:mtext>leaf or fine root</mml:mtext></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf or fine root</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mtext>leaf or fine root</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mtext>rtr</mml:mtext><mml:mtext>leaf or fine root</mml:mtext></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
            where <inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>fine root</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> are the tree leaf and fine root biomasses (in kilograms of C), <inline-formula><mml:math id="M51" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mtext>fine root</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> are the leaf and fine root turnover rates (in kilograms of C per kilogram of C per year), and <inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:msub><mml:mtext>rtr</mml:mtext><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:msub><mml:mtext>rtr</mml:mtext><mml:mtext>fine root</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> are the leaf and fine root retranslocation rates
(in kilograms of C per kilogram of C).</p>
      <?pagebreak page912?><p id="d1e1306"><inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is estimated with an allometric equation based on the stem diameter at breast height (dbh; in centimetres) and on the crown to stem diameter ratio (Dd),
              <disp-formula id="Ch1.E15" content-type="numbered"><label>15</label><mml:math id="M56" display="block"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>⋅</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mi mathvariant="italic">β</mml:mi></mml:msup><mml:mo>⋅</mml:mo><mml:msup><mml:mtext>Dd</mml:mtext><mml:mi mathvariant="italic">γ</mml:mi></mml:msup><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            <inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>fine root</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is deduced from the leaf biomass using the fine root to leaf ratio (<inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>fine root_leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) as follows:
              <disp-formula id="Ch1.E16" content-type="numbered"><label>16</label><mml:math id="M59" display="block"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>fine root</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mi>r</mml:mi><mml:mtext>fine root_leaf</mml:mtext></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            <inline-formula><mml:math id="M60" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>fine root_leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> takes a value between a minimum
(<inline-formula><mml:math id="M61" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>fine root_leaf_min</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) and maximum
(<inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>fine root_leaf_max</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) ratio, depending
on the tree nutritional status, in accordance with the concept of functional
balance (Mäkela, 1986). This means that a higher ratio (more
carbon allocation to fine roots) is used when tree suffers from nutrient deficiency.
For each nutrient, a candidate ratio is obtained based on a linear
relationship depending on the nutritional status. The ratio increases when
the nutritional status deteriorates, and this effect is more pronounced for
nitrogen (N), with nitrogen (N) <inline-formula><mml:math id="M63" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> phosphorus (P) <inline-formula><mml:math id="M64" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> potassium (K)
<inline-formula><mml:math id="M65" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> magnesium (Mg) <inline-formula><mml:math id="M66" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> calcium (Ca). Among the candidate
ratios, the maximum is retained in order to account for the fact that the
most limiting nutrient has the dominant effect. For each nutrient, the
nutritional status is bounded between 0 and 1 and calculated based on the
foliar concentrations (provided in the inventory file) and the optimum
and deficiency thresholds (Mellert and Göttlein, 2012).
              <disp-formula id="Ch1.E17" content-type="numbered"><label>17</label><mml:math id="M67" display="block"><mml:mrow><mml:mtext>Status</mml:mtext><mml:mo>(</mml:mo><mml:mtext>Nutrient</mml:mtext><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>[</mml:mo><mml:mtext>Foliar Nutrient</mml:mtext><mml:mo>]</mml:mo><mml:mo>-</mml:mo><mml:mtext>Deficiency</mml:mtext></mml:mrow><mml:mtext>Optimum-Deficiency</mml:mtext></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            The leaf and fine root litter amounts (<inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mtext>fine root</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in kilograms of C per year) are estimated based on the turnover rate taking into account the retranslocation as follows:
              <disp-formula id="Ch1.E18" content-type="numbered"><label>18</label><mml:math id="M70" display="block"><mml:mtable rowspacing="0.2ex" columnspacing="1em" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mtext>leaf or fine root</mml:mtext></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf or fine root</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mtext>leaf or fine root</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msub><mml:mtext>rt</mml:mtext><mml:mtext>leaf or fine root</mml:mtext></mml:msub></mml:mrow></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
            Allocation priority is given to leaves and fine roots. The carbon allocated
to leaves corresponds to the annual leaf production (<inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in kilograms of C per year), which is equal to the fallen leaf biomass of the previous year plus the leaf biomass change (<inline-formula><mml:math id="M72" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in kilograms of C per year),
              <disp-formula id="Ch1.E19" content-type="numbered"><label>19</label><mml:math id="M73" display="block"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mrow><mml:msub><mml:mtext>leaf</mml:mtext><mml:mrow><mml:mi>t</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is determined by
              <disp-formula id="Ch1.E20" content-type="numbered"><label>20</label><mml:math id="M75" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mrow><mml:msub><mml:mtext>leaf</mml:mtext><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mrow><mml:msub><mml:mtext>leaf</mml:mtext><mml:mrow><mml:mi>t</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mrow><mml:msub><mml:mtext>leaf</mml:mtext><mml:mrow><mml:mi>t</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mrow><mml:msub><mml:mtext>leaf</mml:mtext><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> are the tree leaf biomasses corresponding to the previous and the current years, respectively.</p>
      <p id="d1e1725">The fine root production is then estimated according to the same logic.
              <disp-formula id="Ch1.E21" content-type="numbered"><label>21</label><mml:math id="M78" display="block"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mtext>fine root</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mrow><mml:msub><mml:mtext>fine root</mml:mtext><mml:mrow><mml:mi>t</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mtext>fr</mml:mtext></mml:msub><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>fr</mml:mtext></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mrow><mml:msub><mml:mtext>fine root</mml:mtext><mml:mrow><mml:mi>t</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is provided by Eq. (16).</p>
      <p id="d1e1793">When the carbon allocated to leaves and fine roots is higher than the npp plus the retranslocated carbon (suppressed trees with low gpp and npp for their size), the leaf and fine root productions are recalculated so that they do not exceed 90 % of the available carbon.</p>
      <p id="d1e1797">Then, the fruit production (<inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mtext>fruit</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in kilograms of C per year) is estimated with an allometric equation similar to Eq. (15) and is considered directly
proportional to the light competition index since fructification is known to
be favoured when tree crowns are exposed to the sun (Greene et al., 2002;
Davi et al., 2016). A threshold dbh (dbh<inline-formula><mml:math id="M81" display="inline"><mml:msub><mml:mi/><mml:mtext>threshold</mml:mtext></mml:msub></mml:math></inline-formula>; in centimetres) is fixed, below which no fruit production occurs.
              <disp-formula id="Ch1.E22" content-type="numbered"><label>22</label><mml:math id="M82" display="block"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mtext>fruit</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>⋅</mml:mo><mml:mtext>LCI</mml:mtext><mml:mo>⋅</mml:mo><mml:mo>(</mml:mo><mml:mtext>dbh</mml:mtext><mml:mo>-</mml:mo><mml:msub><mml:mtext>dbh</mml:mtext><mml:mtext>threshold</mml:mtext></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mi mathvariant="italic">β</mml:mi></mml:msup></mml:mrow></mml:math></disp-formula>
            In this equation, the parameter <inline-formula><mml:math id="M83" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula> takes a default value or is
adapted based on the fruit production of the year (when the file with the
amount of fruit litterfall per year and per tree species is loaded).</p>
      <p id="d1e1864">Part of the carbon is also used to compensate for branch and root mortality.
The branch mortality (<inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mtext>branch</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in kilograms of C per year) is described with an equation of the same form as Eq. (15), while the structural root mortality (<inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mtext>root</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in kilograms of C per year) is obtained using a turnover rate
similar to that of the branches.</p>
      <p id="d1e1889">After subtracting the leaf, fine root and fruit productions and the root and
branch senescence, the remaining carbon is allocated to structural tree
compartment growth:
              <disp-formula id="Ch1.E23" content-type="numbered"><label>23</label><mml:math id="M86" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>structural</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mtext>npp</mml:mtext><mml:mo>+</mml:mo><mml:mtext>rt</mml:mtext><mml:mo>-</mml:mo><mml:msub><mml:mi>p</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>p</mml:mi><mml:mtext>fine root</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>p</mml:mi><mml:mtext>fruit</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mtext>branch</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mtext>root</mml:mtext></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            At this stage, the remaining carbon is partitioned between the above- and
below-ground parts of the tree according to a fixed root-to-shoot ratio
(<inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>root_shoot</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) as follows:

                  <disp-formula specific-use="align" content-type="numbered"><mml:math id="M88" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E24"><mml:mtd><mml:mtext>24</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>structural_above</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>structural</mml:mtext></mml:msub></mml:mrow><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:msub><mml:mi>r</mml:mi><mml:mtext>root_shoot</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E25"><mml:mtd><mml:mtext>25</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>structural_below</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>structural</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>structural_above</mml:mtext></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

              The increment in aboveground structural biomass is then used to determine
the combined increment in dbh and total height (<inline-formula><mml:math id="M89" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula>; in metres) based on an allometric
equation used to predict aboveground woody biomass (Genet et al., 2011;
Hounzandji et al., 2015),
              <disp-formula id="Ch1.E26" content-type="numbered"><label>26</label><mml:math id="M90" display="block"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>structural_above</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mi mathvariant="italic">γ</mml:mi></mml:msup><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            Deriving this equation and rearranging terms gives

                  <disp-formula specific-use="align" content-type="numbered"><mml:math id="M91" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E27"><mml:mtd><mml:mtext>27</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>structural_above</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mrow><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E28"><mml:mtd><mml:mtext>28</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>structural_above</mml:mtext></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="italic">β</mml:mi><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mrow><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

              The development of the left term provides
              <disp-formula id="Ch1.E29" content-type="numbered"><label>29</label><mml:math id="M92" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mfenced><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mtext>dbh</mml:mtext><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            which can be further developed (see Appendix B for details) to isolate <inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula>:
              <disp-formula id="Ch1.E30" content-type="numbered"><label>30</label><mml:math id="M94" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi><mml:mo>≅</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mfenced></mml:mrow><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>h</mml:mi><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>
            From Eq. (30), we know that the height increment can be expressed as a
function of <inline-formula><mml:math id="M95" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mfenced></mml:mrow><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:math></inline-formula>.
In the following, we refer to it as the height growth potential (<inline-formula><mml:math id="M96" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>h</mml:mi><mml:mtext>pot</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) since it corresponds to the height increment if all of the remaining carbon was allocated to height growth. Contrary to the other term of Eq. (30) <inline-formula><mml:math id="M97" display="inline"><mml:mrow><mml:mfenced close=")" open="("><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mi>h</mml:mi><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced></mml:mrow></mml:math></inline-formula>, which is
unknown, this height growth potential can be evaluated at this step by
dividing the result of Eq. (28) by dbh<inline-formula><mml:math id="M98" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>. However, depending on the level of
competition for light and on the tree size, only part of this height growth
potential will be effectively realized for the height increment. For each tree
species, an empirical relationship, predicting height growth from the height
growth potential, the light competition index and the tree size (dbh or height),
was therefore fitted based on successive inventory data (see Appendix E).
              <disp-formula id="Ch1.E31" content-type="numbered"><label>31</label><mml:math id="M99" display="block"><mml:mtable class="split" columnspacing="1em" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi>a</mml:mi><mml:mo>+</mml:mo><mml:mi>b</mml:mi><mml:mo>⋅</mml:mo><mml:mtext>dbh</mml:mtext><mml:mo>+</mml:mo><mml:mi>c</mml:mi><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:mi>d</mml:mi><mml:mo>⋅</mml:mo><mml:mtext>LCI</mml:mtext><mml:mo>+</mml:mo><mml:mi>e</mml:mi><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>h</mml:mi><mml:mtext>pot</mml:mtext></mml:msub></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>+</mml:mo><mml:mi>f</mml:mi><mml:mo>⋅</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>h</mml:mi><mml:mtext>pot</mml:mtext></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mi>g</mml:mi><mml:mo>⋅</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>h</mml:mi><mml:mtext>pot</mml:mtext></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
            The dbh increment is then determined by rearranging Eq. (29) as follows:
              <disp-formula id="Ch1.E32" content-type="numbered"><label>32</label><mml:math id="M100" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext><mml:mo>=</mml:mo><mml:msqrt><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow><mml:mrow><mml:mo>(</mml:mo><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle></mml:msqrt><mml:mo>-</mml:mo><mml:mtext>dbh</mml:mtext><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            The increments in root, stem and branch biomasses are obtained as follows:

                  <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M101" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E33"><mml:mtd><mml:mtext>33</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>root</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>r</mml:mi><mml:mtext>root_shoot</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>structural_above</mml:mtext></mml:msub></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E34"><mml:mtd><mml:mtext>34</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mtable class="split" columnspacing="1em" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>stem</mml:mtext></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mi>f</mml:mi><mml:mo>⋅</mml:mo><mml:mi mathvariant="italic">ρ</mml:mi><mml:mo>⋅</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mtext>dbh</mml:mtext><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mtext>del</mml:mtext></mml:msub><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>h</mml:mi><mml:mtext>del</mml:mtext></mml:msub></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:msub><mml:mi>h</mml:mi><mml:mtext>del</mml:mtext></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E35"><mml:mtd><mml:mtext>35</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>branch</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>structural_above</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>b</mml:mi><mml:mtext>stem</mml:mtext></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

              where  <inline-formula><mml:math id="M102" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> is the form coefficient (in cubic metres per cubic metre), <inline-formula><mml:math id="M103" display="inline"><mml:mi mathvariant="italic">ρ</mml:mi></mml:math></inline-formula> is the stem volumetric mass (in kilograms of C per cubic metre) and <inline-formula><mml:math id="M104" display="inline"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mtext>del</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the Delevoy height (in metres) corresponding to the height at which stem diameter is half the diameter at breast height (see Appendix C).</p>
      <?pagebreak page913?><p id="d1e2758">The branch and root biomasses are then distributed in three categories, defined
based on the diameter, which are as follows: small branches/roots <inline-formula><mml:math id="M105" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 4 cm, medium
branches/roots between 4 and 7 cm and coarse branches/roots <inline-formula><mml:math id="M106" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 7 cm.
The proportions of small, medium and coarse branches/roots are determined
based on equations of the same form as those presented in Hounzandji et al. (2015) for oak branches. Until we can adjust these equations on appropriate
data sets, the parameters of Hounzandji et al. (2015) are also used for
beech branches and for oak and beech roots. The distribution in the root
categories has no impact on the functioning of the model since this
information is not used elsewhere. This is just a model output that the user
can ignore or consider as a whole.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS5">
  <label>2.2.5</label><title>Crown extension</title>
      <p id="d1e2784">Depending on whether the competition with the neighbouring trees is taken
into account or not, the crown dynamics can be described by two different
approaches. When local competition is not considered (distance-independent
approach), changes in crown dimensions are derived from dbh or height increment
based on the following empirical relationships:

                  <disp-formula specific-use="align" content-type="numbered"><mml:math id="M107" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E36"><mml:mtd><mml:mtext>36</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>hlce</mml:mtext><mml:mo>=</mml:mo><mml:mtext>hlce</mml:mtext><mml:mi mathvariant="italic">%</mml:mi><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E37"><mml:mtd><mml:mtext>37</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>hcb</mml:mtext><mml:mo>=</mml:mo><mml:mtext>hcb</mml:mtext><mml:mi mathvariant="italic">%</mml:mi><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E38"><mml:mtd><mml:mtext>38</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>cr</mml:mtext><mml:mo>=</mml:mo><mml:msub><mml:mtext>Dd</mml:mtext><mml:mtext>pred</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext></mml:mrow><mml:mn mathvariant="normal">200</mml:mn></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

              where hcb% and hlce% are the proportions of the total height
corresponding to the height to crown base (hcb; in metres) and to the height of
largest crown extension (hlce; in metres), respectively; <inline-formula><mml:math id="M108" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>cr is the change in crown radius (in metres) whatever the direction; <inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:msub><mml:mtext>Dd</mml:mtext><mml:mtext>pred</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the crown to stem diameter ratio estimated by Eq. (10).</p>
      <p id="d1e2894">Alternatively, the changes in crown dimensions can be described based on the
competition with the neighbouring trees (distance-dependent approach). The
space around a target tree is divided into four sectors according to the four
cardinal directions (north between 315 and 45<inline-formula><mml:math id="M110" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>, east
between 45 and 135<inline-formula><mml:math id="M111" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>, south between 135 and
225<inline-formula><mml:math id="M112" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>, and west between 225 and 315<inline-formula><mml:math id="M113" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>). In each
sector, the tree that is the closest to the target tree is retained as a
competitor if its height is higher than the hcb of the target tree. Beyond a
certain distance (i.e. 2 times the maximal crown radius of 10 m), no
competitor is considered. For each main direction, the model calculates an
hlce at equilibrium (<inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:msub><mml:mtext>hlce</mml:mtext><mml:mtext>eq</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in metres) for the target tree. This hlce at
equilibrium is located between a minimum (hcb; in metres) and a maximum
(<inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:msub><mml:mtext>hlce</mml:mtext><mml:mtext>max</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in metres). <inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:msub><mml:mtext>hlce</mml:mtext><mml:mtext>max</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is obtained by determining the higher intersection between the potential crowns of the target tree and the
competitor. The potential crown of a tree is the crown that this tree would
have had in absence of competition and is considered as having the shape of
a half-ellipsoid, centred on the tree trunk and with the semi-axis lengths
equal to the tree potential crown radius (cr<inline-formula><mml:math id="M117" display="inline"><mml:msub><mml:mi/><mml:mtext>pot</mml:mtext></mml:msub></mml:math></inline-formula>; in metres; see below) and to the crown length (<inline-formula><mml:math id="M118" display="inline"><mml:mrow><mml:mi>h</mml:mi><mml:mo>-</mml:mo></mml:mrow></mml:math></inline-formula>hcb). hlce<inline-formula><mml:math id="M119" display="inline"><mml:msub><mml:mi/><mml:mtext>eq</mml:mtext></mml:msub></mml:math></inline-formula> is positioned between the
minimum and the maximum values according to the competition intensity,
estimated based on the target tree and the competitor heights (<inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mtext>target</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M121" display="inline"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mtext>comp</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in metres), as well as the hcb of the target tree (Appendix D).
              <disp-formula id="Ch1.E39" content-type="numbered"><label>39</label><mml:math id="M122" display="block"><mml:mtable class="split" rowspacing="0.2ex" columnspacing="1em" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mtext>hlce</mml:mtext><mml:mtext>eq</mml:mtext></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mtext>hcb</mml:mtext><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mtext>hlce</mml:mtext><mml:mtext>max</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:mtext>hcb</mml:mtext><mml:mo>)</mml:mo><mml:mo>⋅</mml:mo><mml:mo movablelimits="false">max⁡</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mo movablelimits="false">min⁡</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mtext>comp</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:mtext>hcb</mml:mtext></mml:mrow><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mtext>target</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:mtext>hcb</mml:mtext></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
            The four values of <inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:msub><mml:mtext>hlce</mml:mtext><mml:mtext>eq</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> are then averaged
(<inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:msub><mml:mtext>hlce</mml:mtext><mml:mtext>eq_mean</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>).</p>
      <p id="d1e3118">Finally, the change in hlce is determined as follows:
<?xmltex \hack{\newline}?><?xmltex \hack{\noindent}?>if <inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:mtext>hlce</mml:mtext><mml:mo>&lt;</mml:mo><mml:msub><mml:mtext>hlce</mml:mtext><mml:mtext>eq_mean</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>,
              <disp-formula id="Ch1.E40" content-type="numbered"><label>40</label><mml:math id="M126" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>hlce</mml:mtext><mml:mo>=</mml:mo><mml:mo movablelimits="false">min⁡</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mtext>hlce</mml:mtext><mml:mtext>max</mml:mtext></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mtext>hlce</mml:mtext><mml:mtext>eq_mean</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:mtext>hlce</mml:mtext><mml:mo>)</mml:mo></mml:mrow></mml:math></disp-formula>
            else,
              <disp-formula id="Ch1.E41" content-type="numbered"><label>41</label><mml:math id="M127" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>hlce</mml:mtext><mml:mo>=</mml:mo><mml:mo movablelimits="false">max⁡</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mtext>hlce</mml:mtext><mml:mtext>max</mml:mtext></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mtext>hlce</mml:mtext><mml:mtext>eq_mean</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:mi>h</mml:mi><mml:mi>l</mml:mi><mml:mi>c</mml:mi><mml:mi>e</mml:mi><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mtext>hlce</mml:mtext><mml:mtext>max</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the maximum change in hlce allowed by the model.</p>
      <p id="d1e3236">The change in hcb is obtained with the same logic.
<?xmltex \hack{\newline}?><?xmltex \hack{\noindent}?>
If <inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:mtext>hcb</mml:mtext><mml:mo>&lt;</mml:mo><mml:msub><mml:mtext>hcb</mml:mtext><mml:mtext>eq_mean</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>,
              <disp-formula id="Ch1.E42" content-type="numbered"><label>42</label><mml:math id="M130" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>hcb</mml:mtext><mml:mo>=</mml:mo><mml:mo movablelimits="false">min⁡</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mtext>hcb</mml:mtext><mml:mtext>max</mml:mtext></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mtext>hcb</mml:mtext><mml:mtext>eq_mean</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:mtext>hcb</mml:mtext><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            else,
              <disp-formula id="Ch1.E43" content-type="numbered"><label>43</label><mml:math id="M131" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>hcb</mml:mtext><mml:mo>=</mml:mo><mml:mo movablelimits="false">max⁡</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mtext>hcb</mml:mtext><mml:mtext>max</mml:mtext></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mtext>hcb</mml:mtext><mml:mtext>eq_mean</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:mtext>hcb</mml:mtext><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:msub><mml:mtext>hcb</mml:mtext><mml:mtext>eq_mean</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the hcb estimated from the tree
height based on hcb% (Eq. 37).</p>
      <p id="d1e3349">The changes in the four crown radii are calculated based on crown radii at
equilibrium (<inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>eq</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in metres), which are estimated by considering the competitive strength of the target and neighbouring trees. For a given
direction, <inline-formula><mml:math id="M134" display="inline"><mml:mrow><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>eq</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is calculated based on the potential (free-growth) crown radius of the target tree (<inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>pot_target</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in metres)
and its competitor (<inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>pot_comp</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in metres), the distance
between the two trees (<inline-formula><mml:math id="M137" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula>; in metres), and the crown overlap ratio (<inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>overlap</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in metres per metre) as follows:
              <disp-formula id="Ch1.E44" content-type="numbered"><label>44</label><mml:math id="M139" display="block"><mml:mrow><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>eq</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>pot_target</mml:mtext></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>pot_target</mml:mtext></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>pot_comp</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>⋅</mml:mo><mml:mi>d</mml:mi><mml:mo>⋅</mml:mo><mml:msub><mml:mi>r</mml:mi><mml:mtext>overlap_target</mml:mtext></mml:msub><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            The potential crown radius (<inline-formula><mml:math id="M140" display="inline"><mml:mrow><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>pot</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) of a tree if determined by
              <disp-formula id="Ch1.E45" content-type="numbered"><label>45</label><mml:math id="M141" display="block"><mml:mrow><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>pot</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">200</mml:mn></mml:mfrac></mml:mstyle><mml:mo>⋅</mml:mo><mml:msub><mml:mtext>Dd</mml:mtext><mml:mtext>pred</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:mtext>sh</mml:mtext><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where Dd<inline-formula><mml:math id="M142" display="inline"><mml:msub><mml:mi/><mml:mtext>pred</mml:mtext></mml:msub></mml:math></inline-formula> is the crown to stem diameter ratio estimated by Eq. (10),
and sh is a coefficient allowing a shift from the mean to the maximum
Dd<inline-formula><mml:math id="M143" display="inline"><mml:msub><mml:mi/><mml:mtext>pred</mml:mtext></mml:msub></mml:math></inline-formula>.</p>
      <p id="d1e3524">The crown overlap ratio is estimated by considering neighbouring trees of
the same species two by two and then calculating the ratio between the sum of
their crown radii and the<?pagebreak page914?> distance between the corresponding tree stems.
This overlap ratio accounts for the capacity of a tree species to penetrate
in neighbouring crowns.</p>
      <p id="d1e3527">The change in crown radius is then determined for each direction as follows:
<?xmltex \hack{\newline}?><?xmltex \hack{\noindent}?>if <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:mtext>cr</mml:mtext><mml:mo>&lt;</mml:mo><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>eq</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>,
              <disp-formula id="Ch1.E46" content-type="numbered"><label>46</label><mml:math id="M145" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>cr</mml:mtext><mml:mo>=</mml:mo><mml:mo movablelimits="false">min⁡</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>max</mml:mtext></mml:msub><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>eq</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:mtext>cr</mml:mtext><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            else,
              <disp-formula id="Ch1.E47" content-type="numbered"><label>47</label><mml:math id="M146" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>cr</mml:mtext><mml:mo>=</mml:mo><mml:mo movablelimits="false">max⁡</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>max</mml:mtext></mml:msub><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>eq</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:mtext>cr</mml:mtext><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>min</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>max</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> are respectively the
minimum and the maximum change in cr allowed by the model. They are
obtained in a similar way as <inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>pot</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, with
              <disp-formula id="Ch1.E48" content-type="numbered"><label>48</label><mml:math id="M150" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mtext>cr</mml:mtext><mml:mtext>max</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext></mml:mrow><mml:mn mathvariant="normal">200</mml:mn></mml:mfrac></mml:mstyle><mml:mo>⋅</mml:mo><mml:mtext>Dd</mml:mtext><mml:mo>⋅</mml:mo><mml:mtext>sh</mml:mtext><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
</sec>
<sec id="Ch1.S2.SS2.SSS6">
  <label>2.2.6</label><title>Tree harvesting and mortality</title>
      <p id="d1e3703">During the simulation, thinning can be achieved at each annual step by
(i) selecting the trees from a list or a map or according to tree
characteristics (tree species, age, dbh, height, etc.), (ii) defining the number of trees to be thinned per diameter class using an
interactive histogram, or (iii) loading a file listing the trees that
must be thinned. In addition, the thinning methods developed for GYMNOS and
QUERGUS are compatible with HETEROFOR. They allow one to reach a target basal
area, density or relative density index by thinning from below or from above
or by creating gaps (Ligot et al., 2014).</p>
      <p id="d1e3706">When the npp of a tree is not sufficient to ensure a normal leaf and fine root development (for suppressed trees and/or after a severe drought), the leaf
biomass is reduced and induces a defoliation, which is estimated as follows:
              <disp-formula id="Ch1.E49" content-type="numbered"><label>49</label><mml:math id="M151" display="block"><mml:mrow><mml:mtext>Def</mml:mtext><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf_corr</mml:mtext></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>⋅</mml:mo><mml:mn mathvariant="normal">100</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf_corr</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> are, respectively, the
leaf biomass estimated with Eq. (15) and the leaf biomass corrected to match
the available carbon (see Sect. 2.2.4).</p>
      <p id="d1e3768">Tree mortality occurs when trees reach a defoliation of 90 %, considering
that a tree with less than 10 % of its leaves is in an advanced stage of
decline and is unlikely to recover (Manion, 1981). Hence, HETEROFOR takes
into account the mortality resulting from carbon starvation due to light
competition and/or water stress (stomatal closure).</p>
</sec>
<sec id="Ch1.S2.SS2.SSS7">
  <label>2.2.7</label><title>Growth reconstruction</title>
      <p id="d1e3779">HETEROFOR was adapted to allow the user to run it in reverse mode by starting
from the known increments in dbh and <inline-formula><mml:math id="M154" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula> to reconstruct an individual npp using exactly the same parameters and equations as in the normal mode. To achieve a
reconstruction, an inventory file with tree measurements must be loaded to
create the initial step. From this initial step, the reconstruction tools
can be launched and require another inventory file with tree measurements
achieved one or several years later. Based on these two inventories,
HETEROFOR calculates the mean dbh and <inline-formula><mml:math id="M155" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula> increments for each tree and uses the
model equations to reconstruct each step and evaluate among other individual
npp's. The npp is obtained by rearranging Eq. (23), in which the carbon allocated to
the structural biomass is calculated from the dbh and <inline-formula><mml:math id="M156" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula> increments using Eqs. (27), (25) and (24). The carbon allocated to leaf, fine root and fruit
production is determined, respectively, with Eqs. (19), (21) and (22), while the
amount retranslocated from leaves and roots before senescence is evaluated
with Eq. (14). Finally, the terms of Eq. (23) accounting for the leaf and
fine root litter were determined with Eq. (18). In addition to two stand
inventories, the reconstruction tool also requires a file listing the trees
which were cut or died between the two inventory dates and the last year
during which they were present in the stand.</p>
</sec>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Input variables and parameter setting for a case study</title>
      <p id="d1e3812">The model was tested in three stands that contrast in structure and species
composition. These stands were located close to each other (<inline-formula><mml:math id="M157" display="inline"><mml:mo lspace="0mm">&lt;</mml:mo></mml:math></inline-formula> 1 km)
on the same tableland (300 m elevation) in the western part of the Belgian
Ardennes at Baileux (50<inline-formula><mml:math id="M158" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>01<inline-formula><mml:math id="M159" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula> N, 4<inline-formula><mml:math id="M160" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>24<inline-formula><mml:math id="M161" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula> E). The average
annual rainfall is slightly above 1000 mm, and the mean annual temperature is
8 <inline-formula><mml:math id="M162" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C. The forest (60 ha) consists of sessile oaks (<italic>Quercus petraea</italic> Liebl.) and
European beeches (<italic>Fagus sylvatica</italic> L.) and lies on acid brown earth soil (Luvisol according to
the FAO soil taxonomy) with a moder humus and an <inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mtext>h</mml:mtext></mml:msub><mml:msub><mml:mi>B</mml:mi><mml:mtext>w</mml:mtext></mml:msub><mml:mi>C</mml:mi></mml:mrow></mml:math></inline-formula> profile.
The soil has been developed on a loamy and stony solifluction sheet in which
weathering products of the bedrock (Lower Devonian: sandstone and schist)
were mixed with added periglacial loess.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e3895">Stand characteristics for the main tree species derived from stand
inventories in 2001. Standard deviation is provided in parentheses.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Stand</oasis:entry>
         <oasis:entry colname="col2">Tree species</oasis:entry>
         <oasis:entry colname="col3">Tree density</oasis:entry>
         <oasis:entry colname="col4">Basal area</oasis:entry>
         <oasis:entry colname="col5">gbh<inline-formula><mml:math id="M165" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">Dominant height</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">(N ha<inline-formula><mml:math id="M166" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">(m<inline-formula><mml:math id="M167" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> ha<inline-formula><mml:math id="M168" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5">(cm)</oasis:entry>
         <oasis:entry colname="col6">(m)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Oak-dominated</oasis:entry>
         <oasis:entry colname="col2">Sessile oak</oasis:entry>
         <oasis:entry colname="col3">187</oasis:entry>
         <oasis:entry colname="col4">16.2</oasis:entry>
         <oasis:entry colname="col5">100.6 (26.5)</oasis:entry>
         <oasis:entry colname="col6">21.9</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">(0.90 ha)</oasis:entry>
         <oasis:entry colname="col2">European beech</oasis:entry>
         <oasis:entry colname="col3">118</oasis:entry>
         <oasis:entry colname="col4">4</oasis:entry>
         <oasis:entry colname="col5">46.4 (35.6)</oasis:entry>
         <oasis:entry colname="col6">15.5</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Beech-dominated</oasis:entry>
         <oasis:entry colname="col2">Sessile oak</oasis:entry>
         <oasis:entry colname="col3">72</oasis:entry>
         <oasis:entry colname="col4">6.4</oasis:entry>
         <oasis:entry colname="col5">103.3 (18.1)</oasis:entry>
         <oasis:entry colname="col6">23</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">(1.44 ha)</oasis:entry>
         <oasis:entry colname="col2">European beech</oasis:entry>
         <oasis:entry colname="col3">217</oasis:entry>
         <oasis:entry colname="col4">16.5</oasis:entry>
         <oasis:entry colname="col5">87.5 (41.5)</oasis:entry>
         <oasis:entry colname="col6">25</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Mixed</oasis:entry>
         <oasis:entry colname="col2">Sessile oak</oasis:entry>
         <oasis:entry colname="col3">118</oasis:entry>
         <oasis:entry colname="col4">12.9</oasis:entry>
         <oasis:entry colname="col5">115.5 (21.0)</oasis:entry>
         <oasis:entry colname="col6">24.5</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">(1.80 ha)</oasis:entry>
         <oasis:entry colname="col2">European beech</oasis:entry>
         <oasis:entry colname="col3">352</oasis:entry>
         <oasis:entry colname="col4">17</oasis:entry>
         <oasis:entry colname="col5">91.2 (39.3)</oasis:entry>
         <oasis:entry colname="col6">25.7</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e3898"><inline-formula><mml:math id="M164" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula> Girth at breast height.</p></table-wrap-foot></table-wrap>

      <p id="d1e4149">By the end of the 19th century, the Baileux forest was probably an oak
coppice with a few standards. Taking advantage of the massive oak
regeneration in the 1880s, the forest developed progressively into a high
forest and was then invaded by beeches. In 2001, the area was covered by
even-aged oak trees and heterogeneously sized beech trees. At that time,
three experimental plots were installed at the Baileux site in order to
study the impact of tree species mixing on ecosystem functioning (Jonard et
al., 2006, 2007, 2008; André et al., 2008a, b, 2010, 2011); two
plots were located in stands dominated by either sessile oak or beech, and
the third one was a mixture of both species (Table 1). In each plot, all
trees with a circumference higher than 15 cm were mapped (coordinates) and
measured (stem circumference at a height of 1.3 m, total tree height, height
of largest crown extension,<?pagebreak page915?> height to crown base and crown diameters in two
directions) at the end of the years 2001 and 2011.<?xmltex \hack{\newpage}?></p>
      <p id="d1e4154">Meteorological data were monitored with an automatic meteorological station
located in an open field that is 300 m away from the forest site. Soil horizon
properties were characterized based on the soil profile description and the
measurements carried out by Jonard et al. (2011).</p>
      <p id="d1e4157">To run the simulations, the values of some model parameters were taken
directly from the literature. Other parameters involved in empirical
relationships were fitted with either data from previous studies or
unpublished monitoring data collected in the study site or in the International Co-operative Programme on Assessment and Monitoring of Air Pollution Effects on Forests (ICP
Forests) level II plots of Wallonia (Table 2). Potential explanatory
variables in Eq. (31) used to estimate height growth were selected by applying
a stepwise forward selection procedure based on the Bayesian information
criterion (BIC). A multivariate model was then adjusted with the selected
variables (Appendix E). The parameters of the npp to gpp ratio relationship, the
maintenance respiration per gram of nitrogen at 15 <inline-formula><mml:math id="M169" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, and the PAR use
efficiency of sunlit and shaded leaves were adjusted with the nonlinear minimization (nlm) function
in R (R Core Team, 2013) based on observed basal area increments (BAIs) using
the maximum likelihood approach. This calibration was completed only based on
the data of the mixed stand, while the model performances were evaluated with
observations from the three stands of the Baileux site.</p>

<?xmltex \floatpos{p}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e4172">Description of model parameters for sessile oak and European beech
and origin of their value.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.9}[.9]?><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="128.037402pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="91.048819pt"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="56.905512pt"/>
     <oasis:colspec colnum="5" colname="col5" align="justify" colwidth="56.905512pt"/>
     <oasis:colspec colnum="6" colname="col6" align="justify" colwidth="85.358268pt"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Symbol</oasis:entry>
         <oasis:entry colname="col2">Description</oasis:entry>
         <oasis:entry colname="col3">Units</oasis:entry>
         <oasis:entry rowsep="1" namest="col4" nameend="col5" align="center">Value </oasis:entry>
         <oasis:entry colname="col6">Origin</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">Sessile oak</oasis:entry>
         <oasis:entry colname="col5">European beech</oasis:entry>
         <oasis:entry colname="col6"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col6">Carbon fixation </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M170" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">extinction coefficient</oasis:entry>
         <oasis:entry colname="col3">m<inline-formula><mml:math id="M171" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">0.53 </oasis:entry>
         <oasis:entry colname="col6">fitted with tree growth<?xmltex \hack{\hfill\break}?>data of the study site</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">PUE<inline-formula><mml:math id="M172" display="inline"><mml:msub><mml:mi/><mml:mtext>sl</mml:mtext></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">PAR use efficiency of sunlit leaves</oasis:entry>
         <oasis:entry colname="col3">kg C per mole of photons</oasis:entry>
         <oasis:entry colname="col4">0.00006</oasis:entry>
         <oasis:entry colname="col5">0.000216</oasis:entry>
         <oasis:entry colname="col6">fitted with tree growth<?xmltex \hack{\hfill\break}?>data of the study site</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">PUE<inline-formula><mml:math id="M173" display="inline"><mml:msub><mml:mi/><mml:mtext>sh</mml:mtext></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">PAR use efficiency of shaded leaves</oasis:entry>
         <oasis:entry colname="col3">kg C per mole of photons</oasis:entry>
         <oasis:entry colname="col4">0.00105</oasis:entry>
         <oasis:entry colname="col5">0.000584</oasis:entry>
         <oasis:entry colname="col6">fitted with tree growth<?xmltex \hack{\hfill\break}?>data of the study site</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col6">Respiration </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M174" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>sapwood</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">parameters of the sapwood area <?xmltex \hack{\hfill\break}?>function (<inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>/</mml:mo><mml:mi>b</mml:mi><mml:mo>/</mml:mo><mml:mi>c</mml:mi></mml:mrow></mml:math></inline-formula> in Eq. 12)</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">0.00/1.54/0.16</oasis:entry>
         <oasis:entry colname="col5">0.00/0.00/0.52</oasis:entry>
         <oasis:entry colname="col6">fitted with data from<?xmltex \hack{\hfill\break}?>André et al. (2010)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>npp_gpp</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">parameters of the npp to gpp ratio<?xmltex \hack{\hfill\break}?>function (<inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>/</mml:mo><mml:mi>b</mml:mi></mml:mrow></mml:math></inline-formula> in Eq. 8)</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">0.997/<inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.386</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.959/<inline-formula><mml:math id="M179" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.408</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">fitted with tree growth data of the study site</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M180" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mtext>Tref</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">maintenance respiration per gram of N at the reference temperature (15 <inline-formula><mml:math id="M181" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C)</oasis:entry>
         <oasis:entry colname="col3">moles <inline-formula><mml:math id="M182" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> per gram of N per hour</oasis:entry>
         <oasis:entry colname="col4">0.000079</oasis:entry>
         <oasis:entry colname="col5">0.000057</oasis:entry>
         <oasis:entry colname="col6">fitted with tree growth data of the study site</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mtext>gr</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">growth respiration per unit biomass <?xmltex \hack{\hfill\break}?>increment</oasis:entry>
         <oasis:entry colname="col3">kg C per kg C</oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">0.2 </oasis:entry>
         <oasis:entry colname="col6">Dufrêne et al. (2005)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mtext>10_leaf/fine root</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">temperature dependence coefficient of leaf and fine root respiration</oasis:entry>
         <oasis:entry colname="col3">dimensionless</oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">2.1 </oasis:entry>
         <oasis:entry colname="col6">Vose and Bolstad<?xmltex \hack{\hfill\break}?>(1999)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mtext>10_stem/root</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">temperature dependence coefficient of stem and root respiration</oasis:entry>
         <oasis:entry colname="col3">dimensionless</oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">1.7 </oasis:entry>
         <oasis:entry colname="col6">Epron et al. (2001)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mtext>10_branch</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">temperature dependence coefficient of branch respiration</oasis:entry>
         <oasis:entry colname="col3">dimensionless</oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">2.8 </oasis:entry>
         <oasis:entry colname="col6">Damesin et al. (2002)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col6">Carbon allocation </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">parameters of the leaf biomass function (<inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>/</mml:mo><mml:mi>b</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="italic">γ</mml:mi></mml:mrow></mml:math></inline-formula> in Eq. 15)</oasis:entry>
         <oasis:entry colname="col3">kg C</oasis:entry>
         <oasis:entry colname="col4">0.0026/1.96/ 1.96</oasis:entry>
         <oasis:entry colname="col5">1.469/2.00/ 0.00</oasis:entry>
         <oasis:entry colname="col6">Jonard et al. (2006)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mtext>structural_above</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">parameters of the aboveground structural biomass (<inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>/</mml:mo><mml:mi>b</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="italic">γ</mml:mi></mml:mrow></mml:math></inline-formula> in <?xmltex \hack{\hfill\break}?>Eq. 26)</oasis:entry>
         <oasis:entry colname="col3">kg C</oasis:entry>
         <oasis:entry colname="col4">0.000/263.4/ 0.969</oasis:entry>
         <oasis:entry colname="col5">0.056/292.8/ 0.966</oasis:entry>
         <oasis:entry colname="col6">Hounzandj et al. (2015) and Genet et al. (2011)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M191" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>root_shoot</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">root-to-shoot ratio</oasis:entry>
         <oasis:entry colname="col3">kg C per kg C</oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">0.18 </oasis:entry>
         <oasis:entry colname="col6">Genet et al. (2010)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M192" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>fr_leaf_min</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">minimum fine root to leaf ratio</oasis:entry>
         <oasis:entry colname="col3">kg C per kg C</oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">0.5 </oasis:entry>
         <oasis:entry colname="col6">literature data compilation</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M193" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>fr_leaf_max</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">maximum fine root to leaf ratio</oasis:entry>
         <oasis:entry colname="col3">kg C per kg C</oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">2.5 </oasis:entry>
         <oasis:entry colname="col6">literature data compilation</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mtext>leaf</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">leaf relative loss rate</oasis:entry>
         <oasis:entry colname="col3">kg C per kg C per year</oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">1 </oasis:entry>
         <oasis:entry colname="col6"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mtext>fr</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">fine root relative loss rate</oasis:entry>
         <oasis:entry colname="col3">kg C per kg C per year</oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">1 </oasis:entry>
         <oasis:entry colname="col6">Grote and Pretzsch<?xmltex \hack{\hfill\break}?>(2002)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M196" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">stem form factor</oasis:entry>
         <oasis:entry colname="col3">m<inline-formula><mml:math id="M197" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula>per m<inline-formula><mml:math id="M198" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">0.52 </oasis:entry>
         <oasis:entry colname="col6">Hounzandj et al. (2015) and Genet et al. (2011)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M199" display="inline"><mml:mi mathvariant="italic">ρ</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">stem volumetric mass</oasis:entry>
         <oasis:entry colname="col3">kg C m<inline-formula><mml:math id="M200" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">562.17</oasis:entry>
         <oasis:entry colname="col5">556</oasis:entry>
         <oasis:entry colname="col6">Hounzandj et al. (2015) and Genet et al. (2011)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">rt<inline-formula><mml:math id="M201" display="inline"><mml:msub><mml:mi/><mml:mtext>leaf</mml:mtext></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">leaf retranslocation rate</oasis:entry>
         <oasis:entry colname="col3">kg C per kg C per year</oasis:entry>
         <oasis:entry colname="col4">0.4</oasis:entry>
         <oasis:entry colname="col5">0.45</oasis:entry>
         <oasis:entry colname="col6">determined based on<?xmltex \hack{\hfill\break}?>tree foliage data of the<?xmltex \hack{\hfill\break}?>study site</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">rt<inline-formula><mml:math id="M202" display="inline"><mml:msub><mml:mi/><mml:mtext>root</mml:mtext></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">fine root retranslocation rate</oasis:entry>
         <oasis:entry colname="col3">kg C per kg C per year</oasis:entry>
         <oasis:entry colname="col4">0.4</oasis:entry>
         <oasis:entry colname="col5">0.45</oasis:entry>
         <oasis:entry colname="col6">same values as leaves</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M203" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mtext>branch</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">parameters of the branch mortality<?xmltex \hack{\hfill\break}?>function (<inline-formula><mml:math id="M204" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>/</mml:mo><mml:mi>b</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="italic">γ</mml:mi></mml:mrow></mml:math></inline-formula> as in Eq. 15)</oasis:entry>
         <oasis:entry colname="col3">kg C</oasis:entry>
         <oasis:entry colname="col4">6.0E-9/3.064/ 3.064</oasis:entry>
         <oasis:entry colname="col5">5.00E-5/2.681/ 0.00</oasis:entry>
         <oasis:entry colname="col6">fitted with data from<?xmltex \hack{\hfill\break}?>André et al. (2010)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M205" display="inline"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mtext>fruit</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">parameters of the fruit production <?xmltex \hack{\hfill\break}?>function (<inline-formula><mml:math id="M206" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>/</mml:mo><mml:mi>b</mml:mi></mml:mrow></mml:math></inline-formula> in Eq.22)</oasis:entry>
         <oasis:entry colname="col3">kg C</oasis:entry>
         <oasis:entry colname="col4">9.50E-4/2.5</oasis:entry>
         <oasis:entry colname="col5">8.00E-4/2.5</oasis:entry>
         <oasis:entry colname="col6">fitted with litterfall data from level II plots<?xmltex \hack{\hfill\break}?>of Wallonia</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">dbh<inline-formula><mml:math id="M207" display="inline"><mml:msub><mml:mi/><mml:mtext>threshold</mml:mtext></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">threshold dbh for fruit production</oasis:entry>
         <oasis:entry colname="col3">cm</oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">25 </oasis:entry>
         <oasis:entry colname="col6">field observations</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e5133">Continued.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.9}[.9]?><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="142.26378pt"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="56.905512pt"/>
     <oasis:colspec colnum="5" colname="col5" align="justify" colwidth="56.905512pt"/>
     <oasis:colspec colnum="6" colname="col6" align="justify" colwidth="85.358268pt"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Symbol</oasis:entry>
         <oasis:entry colname="col2">Description</oasis:entry>
         <oasis:entry colname="col3">Units</oasis:entry>
         <oasis:entry rowsep="1" namest="col4" nameend="col5" align="center">Value </oasis:entry>
         <oasis:entry colname="col6">Origin</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">Sessile oak</oasis:entry>
         <oasis:entry colname="col5">European beech</oasis:entry>
         <oasis:entry colname="col6"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col6">Tree dimension increment </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">hlce%</oasis:entry>
         <oasis:entry colname="col2">height fraction corresponding to the<?xmltex \hack{\hfill\break}?>largest crown extension height</oasis:entry>
         <oasis:entry colname="col3">m per m</oasis:entry>
         <oasis:entry colname="col4">0.81</oasis:entry>
         <oasis:entry colname="col5">0.77</oasis:entry>
         <oasis:entry colname="col6">determined based on<?xmltex \hack{\hfill\break}?>tree inventory data of<?xmltex \hack{\hfill\break}?>the study site</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">hcb%</oasis:entry>
         <oasis:entry colname="col2">height fraction corresponding to the<?xmltex \hack{\hfill\break}?>crown base height</oasis:entry>
         <oasis:entry colname="col3">m per m</oasis:entry>
         <oasis:entry colname="col4">0.7</oasis:entry>
         <oasis:entry colname="col5">0.61</oasis:entry>
         <oasis:entry colname="col6">determined based on<?xmltex \hack{\hfill\break}?>tree inventory data of<?xmltex \hack{\hfill\break}?>the study site</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Dd</oasis:entry>
         <oasis:entry colname="col2">parameters of the crown to stem diameter function (<inline-formula><mml:math id="M208" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>/</mml:mo><mml:mi>b</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="italic">δ</mml:mi></mml:mrow></mml:math></inline-formula> in Eq. 10)</oasis:entry>
         <oasis:entry colname="col3">m per m</oasis:entry>
         <oasis:entry colname="col4">16.20/0.0280/ 0.00/0.00</oasis:entry>
         <oasis:entry colname="col5">10.49/0.00/ 1379/<inline-formula><mml:math id="M209" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2881</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">determined based on<?xmltex \hack{\hfill\break}?>tree inventory data of<?xmltex \hack{\hfill\break}?>the study site</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">sh</oasis:entry>
         <oasis:entry colname="col2">coefficient to shift the crown to stem <?xmltex \hack{\hfill\break}?>diameter ratio to its maximum</oasis:entry>
         <oasis:entry colname="col3">dimensionless</oasis:entry>
         <oasis:entry colname="col4">1.25</oasis:entry>
         <oasis:entry colname="col5">1.5</oasis:entry>
         <oasis:entry colname="col6">determined based on<?xmltex \hack{\hfill\break}?>tree inventory data of<?xmltex \hack{\hfill\break}?>the study site</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M210" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>overlapping</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">mean crown overlapping ratio</oasis:entry>
         <oasis:entry colname="col3">m per m</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">1.2</oasis:entry>
         <oasis:entry colname="col6">determined based on<?xmltex \hack{\hfill\break}?>tree inventory data of<?xmltex \hack{\hfill\break}?>the study site</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M211" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>hlce<inline-formula><mml:math id="M212" display="inline"><mml:msub><mml:mi/><mml:mtext>max</mml:mtext></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">maximum annual change in the largest<?xmltex \hack{\hfill\break}?>crown extension height</oasis:entry>
         <oasis:entry colname="col3">m yr<inline-formula><mml:math id="M213" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">0.5 </oasis:entry>
         <oasis:entry colname="col6">determined based on<?xmltex \hack{\hfill\break}?>tree growth data of<?xmltex \hack{\hfill\break}?>the study site</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M214" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>hcb<inline-formula><mml:math id="M215" display="inline"><mml:msub><mml:mi/><mml:mtext>max</mml:mtext></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">maximum annual change in the crown<?xmltex \hack{\hfill\break}?>base height</oasis:entry>
         <oasis:entry colname="col3">m yr<inline-formula><mml:math id="M216" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry namest="col4" nameend="col5" align="center">0.5 </oasis:entry>
         <oasis:entry colname="col6">determined based on<?xmltex \hack{\hfill\break}?>tree growth data of the<?xmltex \hack{\hfill\break}?>study site</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <p id="d1e5475">All the simulations carried out in this study were run with the default
option for modelling phenology and water balance (de Wergifosse et al., 2019). In addition, since the tree nutrition and nutrient cycling module
was not activated, the tree nutrient status remained constant during the
simulations.</p>
</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Statistical evaluation of model predictions</title>
      <?pagebreak page917?><p id="d1e5486">The quality of the model was evaluated for various combinations of model
options (i.e. photosynthesis model of CASTANEA vs. PUE, npp to gpp ratio vs.
temperature-dependent maintenance respiration and distance-dependent vs. independent crown extension) by comparing predicted and observed BAIs
using several statistical indices and tests such as the normalized average
error, the <inline-formula><mml:math id="M217" display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> value of the paired <inline-formula><mml:math id="M218" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> test, the regression test, the root mean
square error and the Pearson's correlation (Janssen and Heuberger, 1995).
For the regression test, the Deming fitting procedure (mcreg function of the
mcr package in R) was retained to account for the errors in both the
observations and the predictions. For all of the simulations, the water balance
module was activated. Some option combinations were therefore not tested,
such as the PUE approach without activating the water balance.</p>
      <p id="d1e5503">The model quality was also evaluated based on its ability to reconstruct the
size–growth relationships for the sessile oak and European beech in the three
stands in Baileux. The observed and predicted BAIs of the trees (calculated for
the 2001–2011 period) were related to their girth at the beginning of the
assessment period. A segmented regression was then applied to observations
and predictions to determine the girth threshold beyond which the basal area increment (BAI) linearly
increases with girth and to estimate the slope of the linear relationship
between the BAI and initial girth. The heteroscedasticity of the residuals was
accounted for by modelling their standard deviation with a power function of the
initial girth. The fitting was carried out using the nlm function in R.</p>
</sec>
<sec id="Ch1.S2.SS5">
  <label>2.5</label><title>Simulation experiment</title>
      <p id="d1e5515">To assess how the tree biomass production and its allocation to the
different tree compartments were affected by climate conditions and
management in the model, we simulated the development of the mixed stand
during a dry (2003, with <inline-formula><mml:math id="M219" display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">948</mml:mn></mml:mrow></mml:math></inline-formula> mm and <inline-formula><mml:math id="M220" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>air</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">9.88</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M221" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C), a normal (2005, with <inline-formula><mml:math id="M222" display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1027</mml:mn></mml:mrow></mml:math></inline-formula> mm and <inline-formula><mml:math id="M223" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>air</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">9.67</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M224" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) and a wet year (2012, with <inline-formula><mml:math id="M225" display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1117</mml:mn></mml:mrow></mml:math></inline-formula> mm and <inline-formula><mml:math id="M226" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>air</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">9.37</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M227" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C), and we repeated these simulations after thinning this
stand by reducing its basal area by 25 %. The biomass production and its
allocation were assessed at the stand level as well as at the tree level for
seven cohorts (four beech cohorts and three oak cohorts), defined based on
the tree species and on the girth-class distribution. For this first
simulation experiment, we used the following options: photosynthesis model
of CASTANEA, npp to gpp ratio and distance-independent crown extension.</p>
      <p id="d1e5627">A second simulation experiment was performed to illustrate how the model can
be used to predict climate change impacts on the functioning of the forest ecosystem.
The growth dynamics in the mixed stand in Baileux was simulated according to
three IPCC climate scenarios using the following options: photosynthesis
model of CASTANEA, npp to gpp ratio and distance-independent crown extension. The
climate scenarios retained for this study were obtained from the global
circulation model CNRM-CM5 (Voldoire et al., 2013) based on the
representative concentration pathways (RCPs) for atmospheric greenhouse gases
described in the Fifth Assessment Report of the Intergovernmental Panel on
Climate Change (Collin et al., 2013). The representative concentration
pathways (RCP2.6, RCP4.5 and RCP8.5) are characterized by the radiative forcing
in the year 2100 relative to preindustrial levels (<inline-formula><mml:math id="M228" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>2.6, <inline-formula><mml:math id="M229" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>4.5 and <inline-formula><mml:math id="M230" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>8.5 W m<inline-formula><mml:math id="M231" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). The CNRM-CM5 describes the earth system
climate using variables such as air temperature and precipitation on a
low-resolution grid (1.4<inline-formula><mml:math id="M232" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> in latitude and longitude).<?pagebreak page918?> Although
reliable for estimating global warming, such a model fails to capture the
local climate variations. Therefore, these climate projections were
downscaled by the Royal Meteorological Institute of Belgium (RMI), using the
regional climate model ALARO-0 (Giot et al., 2016). The meteorological files
that were received from RMI are hourly values of the longwave and shortwave
radiation, air temperature, surface temperature, rainfall, specific
humidity, zonal and meridional wind speeds and atmospheric pressure with a 4 km spatial resolution. Specific humidity was converted into relative
humidity using the Tetens formula (Tetens, 1930). For a reference period
(1976–2005), we compared the models predictions with observed
meteorological data and detected some biases, especially for precipitation
(overestimation of 27 %). To correct these biases, we applied correction
factors depending on the month (Maraun and Widmann, 2018). An additive
correction factor was used for the bounded variables (radiation,
precipitation, relative humidity and wind speed), and a multiplicative was used for
the other variables (air and surface temperatures).</p>
      <p id="d1e5672">For the simulations, two 24-year periods (100 years apart) were considered.
The period from 1976 to 1999 served as a historical reference, while the rest
of the simulations based on climate projections were conducted for the
2076–2099 period. The simulations were performed by either keeping the
<inline-formula><mml:math id="M233" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration of the atmosphere constant (i.e. 380 ppm) or allowing it to vary yearly according to the climate scenarios. Each
simulation started with the same initial stand (mixed stand in Baileux in
2001) and lasted 24 years; a thinning operation (25 % in basal area) was
carried out in 1978 or 2078 and in 1990 or 2090 (12-year cutting cycle). The
mean basal area increments obtained with the various climate scenarios were
compared using the Tukey multiple comparison test.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><?xmltex \currentcnt{3}?><label>Table 3</label><caption><p id="d1e5690">Statistical evaluation of predicted basal area increments
(vs. observations) for various combinations of model options using normalized
average error (NAE), paired <inline-formula><mml:math id="M234" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> test, regression
test, root mean square error (RMSE) or Pearson's correlation (Pearson's <inline-formula><mml:math id="M235" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula>).
Standard deviation or confidence intervals are provided in parentheses.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Model options</oasis:entry>
         <oasis:entry colname="col2">NAE</oasis:entry>
         <oasis:entry colname="col3">Paired <inline-formula><mml:math id="M236" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> test</oasis:entry>
         <oasis:entry rowsep="1" namest="col4" nameend="col5" align="center">Orthogonal regression </oasis:entry>
         <oasis:entry colname="col6">RMSE</oasis:entry>
         <oasis:entry colname="col7">Pearson's <inline-formula><mml:math id="M237" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Tree species</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M238" display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> value</oasis:entry>
         <oasis:entry colname="col4">intercept</oasis:entry>
         <oasis:entry colname="col5">slope</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col6">CASTANEA; npp to gpp ratio; distance-independent crown extension </oasis:entry>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">European beech</oasis:entry>
         <oasis:entry colname="col2">0.159</oasis:entry>
         <oasis:entry colname="col3">0.00</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M239" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.59</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.06</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M240" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.75</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">8.64</oasis:entry>
         <oasis:entry colname="col7">0.87</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Sessile oak</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M241" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.052</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.18</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M242" display="inline"><mml:mrow><mml:mn mathvariant="normal">5.28</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.85</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M243" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.75</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.14</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">9.33</oasis:entry>
         <oasis:entry colname="col7">0.63</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col6">CASTANEA; npp to gpp ratio; distance-dependent crown extension </oasis:entry>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">European beech</oasis:entry>
         <oasis:entry colname="col2">0.090</oasis:entry>
         <oasis:entry colname="col3">0.04</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M244" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.75</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.36</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M245" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.79</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.07</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">8.95</oasis:entry>
         <oasis:entry colname="col7">0.83</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Sessile oak</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.020</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.61</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M247" display="inline"><mml:mrow><mml:mn mathvariant="normal">4.54</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.06</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M248" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.77</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.14</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">9.11</oasis:entry>
         <oasis:entry colname="col7">0.63</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col6">CASTANEA; temperature-dependent maintenance respiration; distance-independent crown extension </oasis:entry>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">European beech</oasis:entry>
         <oasis:entry colname="col2">0.426</oasis:entry>
         <oasis:entry colname="col3">0.00</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M249" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.55</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.06</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M250" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.53</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.07</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">17.97</oasis:entry>
         <oasis:entry colname="col7">0.74</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Sessile oak</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M251" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.013</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.79</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M252" display="inline"><mml:mrow><mml:mn mathvariant="normal">7.18</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.02</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M253" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.62</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.13</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">11.03</oasis:entry>
         <oasis:entry colname="col7">0.59</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col6">CASTANEA; temperature-dependent maintenance respiration; distance-dependent crown extension </oasis:entry>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">European beech</oasis:entry>
         <oasis:entry colname="col2">0.544</oasis:entry>
         <oasis:entry colname="col3">0.00</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M254" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.89</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.07</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M255" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.53</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.06</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">18.60</oasis:entry>
         <oasis:entry colname="col7">0.77</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Sessile oak</oasis:entry>
         <oasis:entry colname="col2">0.054</oasis:entry>
         <oasis:entry colname="col3">0.25</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M256" display="inline"><mml:mrow><mml:mn mathvariant="normal">6.07</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.42</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M257" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.64</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.14</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">11.07</oasis:entry>
         <oasis:entry colname="col7">0.58</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col6">PUE; npp to gpp ratio; distance-independent crown extension </oasis:entry>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">European beech</oasis:entry>
         <oasis:entry colname="col2">0.007</oasis:entry>
         <oasis:entry colname="col3">0.85</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M258" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.60</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.19</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M259" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.86</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.06</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">7.64</oasis:entry>
         <oasis:entry colname="col7">0.85</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Sessile oak</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M260" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.181</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.00</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M261" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.93</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">4.14</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M262" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.02</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.24</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">9.04</oasis:entry>
         <oasis:entry colname="col7">0.54</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col6">PUE; npp to gpp ratio; distance-dependent crown extension </oasis:entry>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">European beech</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M263" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.110</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.01</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M264" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.84</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.57</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M265" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.96</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.09</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">8.41</oasis:entry>
         <oasis:entry colname="col7">0.79</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Sessile oak</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M266" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.223</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.00</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M267" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.76</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5.61</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M268" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.16</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.35</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">9.67</oasis:entry>
         <oasis:entry colname="col7">0.45</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col6">PUE; temperature-dependent maintenance respiration; distance-independent crown extension </oasis:entry>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">European beech</oasis:entry>
         <oasis:entry colname="col2">0.182</oasis:entry>
         <oasis:entry colname="col3">0.01</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M269" display="inline"><mml:mrow><mml:mn mathvariant="normal">4.17</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.37</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M270" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.61</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.09</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">15.43</oasis:entry>
         <oasis:entry colname="col7">0.68</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Sessile oak</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M271" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.172</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.00</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M272" display="inline"><mml:mrow><mml:mn mathvariant="normal">4.65</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.85</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M273" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.90</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.21</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">9.31</oasis:entry>
         <oasis:entry colname="col7">0.55</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col6">PUE; temperature-dependent maintenance respiration; distance-dependent crown extension </oasis:entry>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">European beech</oasis:entry>
         <oasis:entry colname="col2">0.223</oasis:entry>
         <oasis:entry colname="col3">0.00</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M274" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.36</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.47</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M275" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.64</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.09</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">14.73</oasis:entry>
         <oasis:entry colname="col7">0.71</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sessile oak</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M276" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.176</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.00</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M277" display="inline"><mml:mrow><mml:mn mathvariant="normal">4.06</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5.02</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M278" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.95</mml:mn><mml:mo>(</mml:mo><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.28</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">9.79</oasis:entry>
         <oasis:entry colname="col7">0.47</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><?xmltex \currentcnt{2}?><label>Figure 2</label><caption><p id="d1e6778">Relationship between the individual npp reconstructed based on
successive stand inventories (2001 and 2011) and the gpp predicted with the
process-based option (photosynthesis method of CASTANEA) for the three
stands. Values in parentheses are 95 % confidence intervals for the
intercept and the slope in the equations. The Pearson's correlation between
npp and gpp is indicated on the graph.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/905/2020/gmd-13-905-2020-f02.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Results</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Reconstructed npp vs. predicted gpp</title>
      <p id="d1e6803">Based on two successive stand inventories (2001 and 2011) and using
HETEROFOR in reverse mode (see Sect. 2.2.7), the individual npp was
reconstructed and related to the gpp predicted with the photosynthesis method
of CASTANEA. The linear relationship between npp and gpp explained 79 % and 83 %
of the variability in sessile oaks and European beeches, respectively
(Fig. 2). The intercept was positive and just significantly different from 0
but did not differ between the two trees species. The slope of the
relationship was higher for the sessile oak (0.50) than for European beech
(0.40).<?xmltex \hack{\newpage}?></p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{3}?><label>Figure 3</label><caption><p id="d1e6809">Comparison of observed and predicted basal area increments
(BAIs) for the simulation with the photosynthesis method of CASTANEA, the npp to gpp ratio approach to account for tree respiration and the distance-dependent
crown extension (see Table 3). The dashed line represents the Deming
regression between observations and predictions, with the shaded area
indicating the 95 % confidence interval and the solid line the 1 : 1
relationship.</p></caption>
          <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/905/2020/gmd-13-905-2020-f03.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><?xmltex \currentcnt{4}?><label>Figure 4</label><caption><p id="d1e6820">Reconstruction of the size–growth relationships for sessile oak
and European beech in the three stands using the photosynthesis method of
CASTANEA, the npp to gpp ratio approach to account for tree respiration and the distance-dependent crown extension. The predicted relationships between the individual BAI (calculated for the 2001–2011 period) and the initial girth are compared with observed ones. The solid and dashed lines represent the
segmented regression applied, respectively, to observations and predictions to
determine the girth threshold beyond which radial growth linearly increases
with girth and to estimate the slope of the linear relationship between
BAI and initial girth. The 95 % confidence intervals for the intercept and the slope are provided as well as the <inline-formula><mml:math id="M279" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> of the model. No
relationship was fitted for the European beech in the oak-dominated stand
given the lack of data.</p></caption>
          <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/905/2020/gmd-13-905-2020-f04.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Model performance in predicting individual basal area increment (BAI)</title>
      <p id="d1e6848">HETEROFOR was run with different combinations of options for describing
photosynthesis (biochemical model of CASTANEA vs. PUE), respiration (npp to gpp ratio
vs. temperature-dependent maintenance respiration) and crown extension
(distance-dependent vs. distance-independent). The predictions carried out using the
photosynthesis routine of CASTANEA were generally slightly better correlated
to the observations than those obtained with the PUE approach, which however
displayed somewhat lower RMSE (Table 3). For both of the photosynthesis
calculation options, the use of the maintenance respiration routine provided less
accurate predictions (higher NAE and RMSE and lower Pearson's <inline-formula><mml:math id="M280" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula>) than the
npp to gpp ratio approach, and the degradation of the model performance due to the
maintenance respiration option was more marked for the European beech than for
the sessile oak (Table 3). The option for describing crown extension had little
effect on prediction quality. Depending on the criterion considered, the
options selected for calculating photosynthesis and respiration and the
tree species, the distance-independent approach was sometimes the best but
not in all cases (Table 3).</p>
      <p id="d1e6858">For the simulations using the CASTANEA photosynthesis, we retained the npp to
gpp approach and the distance-dependent crown extension as the best combination
of options since the associated predictions were on average not biased for
oak and only slightly biased for beech (Table 3). For this combination of options,
the regression of the observed BAIs on the predictions showed however a
slight underestimation of the low BAIs and a small overestimation of the
high BAIs, which were more pronounced for the European<?pagebreak page919?> beech than for the sessile
oak (Fig. 3). For the PUE method, the npp to gpp ratio and the distance-independent crown extension provided the most accurate predictions (Table 3).</p>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Reconstructing size–growth relationships</title>
      <p id="d1e6869">The size–growth relationships were very similar between observations and
predictions for the mixed stand on which the model was calibrated (Fig. 4).
For the European beech in the beech-dominated stand, the predicted increase
in BAI with the initial girth was steeper than the observed increase, revealing a
slight overestimation of the tree growth (Fig. 4). The proportion of the
BAI variance explained by the size–growth relationship (<inline-formula><mml:math id="M281" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>)
was higher for the European beech than for the sessile oak for both observations and
predictions (Fig. 4).<?xmltex \hack{\newpage}?></p>
</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>Simulation of climate change impact on tree growth</title>
      <p id="d1e6892">In the first simulation experiment, the effect of thinning was much more
pronounced on the smallest trees than on the biggest ones (Fig. 5). The
smallest beech cohort (girth of 0 to 61 cm) almost doubled their annual
biomass production after the thinning (<inline-formula><mml:math id="M282" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>85 %), while the thinning impact
on the biggest oak and beech trees was hardly noticeable (<inline-formula><mml:math id="M283" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>4 % and
<inline-formula><mml:math id="M284" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>2 %, respectively). When looking at the different tree compartments,
one may notice that the thinning effect was more pronounced on the
structural compartments, i.e. roots, stem and branches (<inline-formula><mml:math id="M285" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>52 %), than on
the functional ones, i.e. fine roots, leaves and fruits (<inline-formula><mml:math id="M286" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>22 %). While
thinning increased the individual biomass production, it decreased the
biomass production at the stand level (<inline-formula><mml:math id="M287" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">15</mml:mn></mml:mrow></mml:math></inline-formula> %).</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><label>Figure 5</label><caption><p id="d1e6943">Effects of climate conditions and thinning on biomass
production and its allocation to tree compartment in the mixed stand in
Baileux. The data used to make these graphs were obtained by simulations
using the following options: photosynthesis model of CASTANEA, npp to gpp
ratio and distance-independent crown extension.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/905/2020/gmd-13-905-2020-f05.png"/>

        </fig>

      <?pagebreak page920?><p id="d1e6952">The biomass production at the stand level was 11 % higher for the normal year
than for the dry year (Fig. 5). This effect was observed for all of the cohorts
even if it was less marked on the smallest trees (<inline-formula><mml:math id="M288" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>2 % for the 0–61 cm beech cohort) than on the biggest ones (<inline-formula><mml:math id="M289" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>13 % for oak and beech trees with a girth larger than 140 cm). Whatever the scale considered (tree or stand), there was nearly no difference in biomass production between the normal and wet year. The climate condition effects were marked only on the structural compartment (<inline-formula><mml:math id="M290" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>25 %).</p>
      <p id="d1e6977">When the <inline-formula><mml:math id="M291" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration of the atmosphere was fixed, no effect of
the climate scenario was detected on stand BAI, but a slight impact was observed on sessile oak BAI, which was higher for the RCP2.6 than for the historical scenario (Fig. 6). For the simulations with a variable atmospheric <inline-formula><mml:math id="M292" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
concentration, the differences in total, sessile oak and European beech BAIs were
much more pronounced among climate scenarios. For the whole stand as well
as for oak and beech separately, BAIs increased the following order (1) historical,
(2) RCP2.6, (3) RCP4.5 and (4) RCP8.5, with the stand BAI in each of these RCP scenarios being
between 17 % and 72 % higher than that of the historical scenario. All of the scenarios had BAIs that were significantly different from each other, except RCP2.6 and RCP4.5 for the whole stand and the two tree species and historical and
RCP2.6 for the European beech (Fig. 6).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><?xmltex \currentcnt{6}?><label>Figure 6</label><caption><p id="d1e7004">Basal area increment (BAI) of the mixed stand in Baileux (and of its
two main tree species) simulated with climate scenarios produced with the
general circulation model CNRM-CM5, downscaled with ALARO-0 and corrected empirically for
remaining biases. The simulations were performed by using the CASTANEA
method to calculate photosynthesis, the npp to gpp ratio approach and a
distance-independent description of crown extension. The <inline-formula><mml:math id="M293" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
concentration of the atmosphere was either kept constant (left) or increased
with time according to the climate scenario considered (right). Two time
periods were considered. The 1976–1999 period was used as a reference for
running the model with the historical climate scenario, while the simulations
with future climate scenarios were carried out for the 2076–2099 period. The
climate scenarios were based on the representative concentration pathways
for atmospheric greenhouse gases that are described in the fifth assessment report of IPPC. For a given tree species and <inline-formula><mml:math id="M294" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration modality, the
scenarios with common letters have BAIs not significantly different from each
other (<inline-formula><mml:math id="M295" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula>).</p></caption>
          <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/905/2020/gmd-13-905-2020-f06.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Discussion</title>
      <p id="d1e7056">Few tree-level, process-based and spatially explicit models have been
developed, and these often contain only some of the modules necessary to
estimate resource availability (solar radiation, water and nutrients). While
descriptions of these models are generally available in the literature,
doing an evaluation by making a comparison with tree growth measurements is not always
accessible, or such an evaluation has been carried out based on stand-level variables. We have
therefore very little information to compare the performances of HETEROFOR at
the tree level with those of similar models. Simioni et al. (2016) faced the
same problem with the NOTG 3-D model.</p>
      <p id="d1e7059">HETEROFOR first estimates the key phenological dates, the radiation
interception by trees and the hourly water balance (de Wergifosse et al., 2019). Then, based on the absorbed PAR radiation, individual gpp is calculated with a PUE approach or with the photosynthesis routine of CASTANEA (Dufrêne et al., 2005). Whatever the option retained for calculating tree respiration
and crown extension, the photosynthesis routine of CASTANEA and the PUE
efficiency approach performed similarly (Table 3). It is quite encouraging
that the process-based approach for estimating photosynthesis provided
predictions of the same quality as the empirical approach fitted with tree
growth data taken on the study site. If no extrapolation to future climate
is required, the PUE approach remains however still valuable, especially when
hourly meteorological data are lacking. For the three stands in Baileux, we
related the npp reconstructed from successive tree inventories with the gpp
predicted based on the<?pagebreak page921?> CASTANEA approach (Fig. 2). The good linear
relationships (Pearson's correlation <inline-formula><mml:math id="M296" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 0.89) obtained for both
oak and beech make us confident in the adaptation of the photosynthesis
routine of CASTANEA to the tree level. Furthermore, since the parameters of
the photosynthesis routine were taken directly from CASTANEA and not
calibrated specifically for HETEROFOR, one can expect that the agreement
between the predicted gpp and the reconstructed npp could still be improved.</p>
      <?pagebreak page923?><p id="d1e7069">When comparing the two options available in HETEROFOR for converting gpp into
npp, model performances were systematically better with the npp to gpp ratio approach
than with the temperature-dependent routine for the maintenance respiration
calculation (Table 3). This can be partly explained because the error in the
maintenance respiration calculation results from various sources. At the
tree compartment level, uncertainties in the estimation of biomass, sapwood
proportion, nitrogen concentration and temperature are multiplied (Eq. 11).
Then, the errors made on all of the tree compartments are summed up. Among these
uncertainty sources, the inaccuracy in the estimation of the sapwood
proportion could explain why the maintenance respiration routine provided
better results for the sessile oak than for European beech (Table 3). Since the
sapwood of sessile oak can easily be distinguish from the heartwood based on
the colour change, we had a lot of sapwood measurements available to fit a
relationship. For the European beech, this was not the case; instead, we used a
sapwood relationship obtained based on sap flow measurements (Jonard et al.,
2011). This relationship could certainly be improved by direct measurements
of sapwood made after staining the wood to highlight the living parenchyma.
Another way to improve these relationships is to consider the social status
of the trees since dominant trees have a higher sapwood depth than the
suppressed ones (Rodríguez-Calcerrada et al., 2015). We tried to account for
this by estimating the sapwood area based on the tree growth rate, but it did
not significantly increase the quality of the predictions. The poor
performances obtained with the maintenance respiration option also indicate
that the processes at play are still poorly understood and that further
research is needed on this topic.</p>
      <p id="d1e7072">The process-based approach for estimating maintenance respiration explicitly accounts
for the temperature effect through a <inline-formula><mml:math id="M297" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> function. With the
npp to gpp ratio approach, temperature is considered more indirectly by assuming
that it affects respiration and photosynthesis in the same proportion, which
is valid only in a given range of temperature (<inline-formula><mml:math id="M298" display="inline"><mml:mo lspace="0mm">&lt;</mml:mo></mml:math></inline-formula> 20 <inline-formula><mml:math id="M299" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C)
and for non-stressing conditions. Indeed, the optimum temperature for
photosynthesis is between 20 and 30 <inline-formula><mml:math id="M300" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, while the optimum
temperature for respiration is just below the temperature of enzyme
inactivation (<inline-formula><mml:math id="M301" display="inline"><mml:mo lspace="0mm">&gt;</mml:mo></mml:math></inline-formula> 45 <inline-formula><mml:math id="M302" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C). Therefore, between 30 and
45 <inline-formula><mml:math id="M303" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, photosynthetic rates decrease, but the respiration rate could
continue to increase (Yamori et al., 2013). This reasoning however does not
consider that the base rate of respiration acclimate to new mean temperature
conditions and that this acclimation process tends to maintain the npp to gpp
ratio more stably (Collalti and Prentice, 2019). In addition, while water
stress reduces both photosynthesis and respiration, its effect on the two
processes is not necessarily equivalent (Rodríguez-Calcerrada et al., 2014).
The main argument in favour of the npp to gpp ratio approach is the tight coupling
between respiration and photosynthesis since the substrate for respiration
originates from photosynthesis. The npp to gpp ratio is unfortunately neither
universal nor constant. It may vary with tree development stage, climate,
soil fertility and competition conditions (Collalti and Prentice, 2019). The
alternative option based on maintenance respiration calculation is
theoretically more appropriate to simulate the impact of climate change, but
this is at the expense of less accurate predictions at the tree level. The
ideal is to compare the two options to evaluate the prediction uncertainty
associated with the modelling of respiration. In the future, the two
approaches could be improved. Applying the reconstruction procedure of
HETEROFOR on a large diversity of sites would allow us to estimate the npp to
gpp ratio in many different situations, to create a function predicting the
npp to gpp ratio based on its main drivers and to subsequently use it in the
model. In parallel, the respiration calculation<?pagebreak page924?> could be refined by
accounting for thermal acclimation, such as is done in 3D-CMCC (Collalti et al.,
2018).</p>
      <p id="d1e7138">The differences in prediction quality between the two methods of crown
extension modelling (distance-dependent approach vs. distance-independent approach) were quite
small, probably because the length of the simulation was not sufficient to
drastically affect the crown dimensions, which had been initialized based on
measurements. Describing mechanisms that govern crown development in
interaction with neighbours (mechanical abrasion and crown interpenetration) is
however crucial to capturing the nonadditive effect of species mixtures
(Pretzsch, 2014). By accounting for crown plasticity, our distance-dependent
approach could help us to better understand how uneven-aged and mixed stands
optimize light interception by canopy packing and how they increase
productivity (Forrester and Albrecht, 2014; Jucker et al., 2015). To better
evaluate the relevance of this approach, the predicted crown development
should be compared with precise crown measurements that are repeated over several
decades and taken in a large diversity of stand structures. When the model
will be calibrated for a larger number of tree species, long-term
simulations could also be performed to evaluate to what extent the model is
able to reconstruct the empirical relationships that describe tree allometry
variations in response to intra- and inter-specific competition. Such
relationships were established by del Río et al. (2019) using data from the
Spanish National Forest Inventory.</p>
      <p id="d1e7141">Based on the current evaluation, the process-based variant performs similarly
to the more empirical one for photosynthesis and crown extension but not
for respiration; this is probably because the processes are better known for
photosynthesis. For the best combination of options using the CASTANEA
photosynthesis (npp to gpp ratio with distance-dependent crown extension), the
Pearson's correlation between measurements and predictions of individual
basal increment amounted to 0.83 and 0.63 for European beech and sessile
oak, respectively. By comparison, Grote and Pretzsch (2002) obtained a
correlation of 0.60 for the individual volume of beech trees with the
BALANCE model. This lower correlation can partly be explained by the
integration of the uncertainty in tree height in the volume estimations.</p>
      <p id="d1e7144">Individual npp and retranslocated carbon are allocated first to foliage and fine
roots and then partitioned between above- and below-ground structural
compartments. Based on the derivative and rearrangement of a biomass
allometric equation, the increment in aboveground structural biomass is used
to estimate the combined increment in dbh and height. This results in a system of one equation with two unknowns (increment in dbh and height). We decided to resolve it by fixing the height growth based on a relationship that takes into account tree size (dbh or height), the height growth potential (height increment if all of the remaining carbon was allocated to height growth) and a
light competition index. An intermediate level of sophistication was adopted
to describe height growth, between the simple height–dbh allometry and the fine
description of tree architecture of functional–structural models.
Height–dbh relationships provide a static picture in which age and neighbour
effects are confounded and are not suitable to describe individual growth
trajectories (Henry and Aarsen, 1999). More sophisticated relationships
considering age and dominant height can be used for even-aged stands (Le
Moguédec and Dhôte, 2012) but are hardly applicable in uneven-aged
stands for which tree age is unknown. On the other hand, the
functional–structural models that are based on resource availability at the organ level
and use a short time step can only be applied to a limited number of trees
given the high computational demand (Letort et al., 2008).</p>
      <p id="d1e7147">Our individual height growth model was fitted with height data measured 10
years apart (Appendix E). A large uncertainty was however associated to
these data. First, height measurements were obtained to the nearest metre
given the difficulty to clearly identify the top of the trees in closed
canopy forests. Second, as the height increment was obtained based on
repeated height measurements, the error for this variable is the sum of those
made on the height measurements. Consequently, the uncertainty was more or
less of the same order of magnitude as the expected height growth in 10
years. Despite these uncertainties, a substantial part of the variability
was explained by the model (72 % for European beech; 43 % for oak).
Among the variables tested, the height growth potential had the main effect,
which is not surprising since this height growth potential contains the
information on height increment. We were also able to depict the effect of
light competition. For a same-height growth potential, trees undergoing
stronger light competition seem to invest more carbon for height growth than
for dbh increment (Fig. E1 in Appendix E), which is corroborated by results of
other studies (e.g. Lines et al., 2012). This strategy aims at minimizing
overtopping by neighbours and maximizing light interception (Jucker et al.,
2015). Trouvé et al. (2015) found similar results and showed the
positive effect of stand density on height growth in the allocation between
height and diameter increment in even-aged stands of sessile oak trees. The
decrease in the red : far red ratio of incident light promotes apical
dominance and internode elongation through the phytochrome system (shade
avoidance reaction; Henry and Aarsen, 1999). By considering the light
availability effect on height growth at the tree level, HETEROFOR adapts
tree allometry to intra- and inter-specific competition, which is crucial to
accounting for mixing effects in structurally complex stands (del Río et al.,
2019).</p>
      <p id="d1e7150">A first simulation experiment was achieved to assess how tree biomass
production and its allocation to tree compartments respond to climate
conditions and thinning. The results of these simulations are in line with the
basic principles of silviculture; thinning favoured individual tree growth
(especially that of the smaller trees) by redistributing stand biomass
production on a smaller number of trees. At the stand level, thinning
slightly reduced biomass production<?pagebreak page925?> since its intensity was substantial and
the simulation lasted only 1 year, which was not sufficient to allow the
remaining trees to fill the gaps by extending their crown. Drought
conditions reduced the biomass increment of structural components, and this
effect was more pronounced on big trees than on small trees. Indeed, when soil
water availability decreases, smaller trees maintain a higher stomatal
conductivity because of their lower position in the stand canopy. Functional
compartments were less influenced by climate because carbon is allocated to
them in priority in the model. We could improve the allocation routine by
making the fine root to foliage ratio and the root-to-shoot ratio dependent
on the mean soil water availability (Thurm et al., 2017).</p>
      <p id="d1e7153">We were also quite satisfied to observe that the model was able to reproduce
the size–growth relationship. This approach describes the growth
partitioning among trees in a stand, which is useful to estimate the mode of
competition. For the three studied stands and the two tree species, the
competition was partially size asymmetric, with a resource partitioning in
favour of the larger trees (Carl et al., 2018). Within the studied stands,
the European beech trees can be classified in two groups: a group of small
suppressed trees whose radial growth was close to 0 and which were just
surviving and the rest of the trees (beyond a girth threshold) whose radial
growth linearly increased with girth. Regarding sessile oaks, nearly all of the
trees were in the second group, which can be related to the fact that
sessile oak is a less shade-tolerant species than European beech. In the this
mixed stand, the nearly perfect match between the predicted and observed
relationships indicates that the model was able to reproduce growth
partitioning among trees of different tree species and size. These very good
results can be ascribed to the fact that the extinction coefficient and the
respiration parameters were calibrated with data from this stand. In the beech-dominated stand, the model slightly underestimated the radial growth of the
small oak trees and overestimated that of the big beech trees. In this case,
the model seems to allocate too many resources to the big beech trees which
shade the small oak trees. This could be improved by a model calibration
partly specific to this stand (for the npp to gpp ratio) or by a calibration with data covering a much larger range of stand structures.</p>
      <p id="d1e7157">To illustrate one possible application of HETEROFOR, a second simulation
experiment was completed and allowed us to compare the radial growth
predicted for 2076–2099 according to three IPCC scenarios with that of the one
simulated for an historical period (1976–1999). When the atmospheric <inline-formula><mml:math id="M304" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
concentration was kept constant (380 ppm), differences among scenarios
remained nonsignificant, except for sessile oak displaying a slightly
higher basal area increment for the RCP2.6 scenario than for the historical scenario
(Fig. 6). Analysing the model outputs in depth, we found that this lack of
effects resulted from a balance between negative and positive impacts of
climate change. While the increase in air temperature (<inline-formula><mml:math id="M305" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>0.9 and
3.7 <inline-formula><mml:math id="M306" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for RCP2.6 and RCP8.5) and in the vegetation period length
(<inline-formula><mml:math id="M307" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>8 and 37 days for RCP2.6 and RCP8.5) favoured photosynthesis, the more
frequent and intense water stress negatively affected it (de Wergifosse et
al., 2020). The positive and negative effects of climate change were
of the same magnitude for both tree species and offset each other. For the
simulations with a variable atmospheric <inline-formula><mml:math id="M308" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration, the
differences among scenarios were much larger, highlighting a strong <inline-formula><mml:math id="M309" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
fertilization effect for both sessile oak and European beech (Fig. 6). These
results are in agreement with Reyer et al. (2014), which used the 4C model to
predict productivity change in Europe according to a large range of climate
change projections. They found npp increases in most European regions
(except a few cases in Mediterranean mountains) when considering persistent
<inline-formula><mml:math id="M310" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> effects by using a variable atmospheric <inline-formula><mml:math id="M311" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration.
Assuming an acclimation of photosynthesis to <inline-formula><mml:math id="M312" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (by maintaining constant
atmospheric <inline-formula><mml:math id="M313" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>), they predicted increases in northern Europe,
decreases in southern Europe and ambivalent responses elsewhere in Europe. Similar
response patterns were also obtained by Morales et al. (2007). Rötzer et
al. (2013) used the BALANCE model to compare the impact of future and
current climate conditions on the productivity of beeches in Germany and
showed a 30 % decrease in npp without considering the rise in atmospheric
<inline-formula><mml:math id="M314" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration. After evaluating CASTANEA against eddy covariance
and tree growth data in a few highly instrumented sites, Davi et al. (2006)
simulated the trend in gpp and net ecosystem productivity (NEP) in these
sites from 1960 to 2100. For sessile oak and European beech, they obtained a
53 % and 67 % increase in gpp and NEP, respectively.</p>
      <p id="d1e7272">Given the magnitude of the <inline-formula><mml:math id="M315" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fertilization effect (leading to a
72 % increase in basal area increment in 100 years for RCP8.5), we
conducted retrospective simulations to check that HETEROFOR reproduces well
the increase in productivity observed by Bontemps et al. (2011) for beech
forests in the north-east of France (data not shown). Based on historical
atmospheric <inline-formula><mml:math id="M316" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations, we simulated radial growth during two
periods (1879–1910 vs. 1979–2010) using the same climate data (obtained by
reanalysis for 1979–2010). These simulations showed a productivity increase
of 12 % over 100 years. By comparison, Bontemps et al. (2011) reported
productivity increases ranging from 10 to 70 % over 100 years, depending on the nitrogen status of the forest. The increase in radial growth simulated
with HETEROFOR for the mixed stand in Baileux (Fig. 6) seems therefore
plausible but assumes unchanged nutritional status. Increased productivity
generates however higher nutrient demand by trees, which is not
systematically satisfied by larger soil nutrient supply, especially in the
poorest sites. Consequently, the augmentation of forest productivity will
most likely be constrained by nutrient availability and give rise to a
deterioration of the nutritional status as already observed across Europe
(Jonard et al., 2015). To improve our predictions, nutritional constraints
must be taken into account. From this<?pagebreak page926?> perspective, a mineral nutrition and
nutrient cycle module was incorporated in HETEROFOR. As it was developed in
parallel to the water balance, some adaptations are needed for the coupling
of the two modules (e.g. change from an annual to a monthly time step for
soil chemistry update). A complete description and evaluation of the
nutrient module will be provided in a future study.</p>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Conclusion and future prospects</title>
      <p id="d1e7306">Our ambition was to develop a model that is responsive to both management actions
and environmental changes and would be particularly well adapted to mixed
and uneven-aged stands. We thought that this model had to be tree-level and
spatially explicit and had to consider radiation transfer, water balance and
nutrient cycling with a process-based approach. Such models were very scarce
in the literature. The only exceptions were BALANCE, iLand and more recently
NOTG 3-D. To fill this gap, we elaborated the HETEROFOR model based on
concepts quite different from those used for BALANCE, iLand and NOTG 3-D. In
this study, a first evaluation of the model performances showed that
HETEROFOR was able to reproduce size–growth relationships in three oak and
beech stands in the Belgian Ardennes. We also noticed that the npp to gpp
ratio option for describing maintenance respiration provides the best
results, while the process-based and empirical approaches perform similarly
for photosynthesis and crown extension. As this model evaluation was limited
to two tree species and one climate, it only provides a first impression of
the model potential.</p>
      <p id="d1e7309">Here, only the core of HETEROFOR was described. The water balance and
phenology modules are presented and evaluated in a companion paper (de
Wergifosse et al., 2019), while the nutrient module will be described
later. For the next steps, we plan to couple HETEROFOR with existing
libraries such as the ones for regeneration, genetics and economics. As HETEROFOR was
developed within the Capsis platform, it is continually improving thanks to
the collaborative dynamics among modellers.<?xmltex \hack{\newpage}?></p>
      <p id="d1e7313">A broader assessment of the model performances will be carried out based on
forest monitoring plots distributed all over Europe. Indeed, HETEROFOR was
designed to be particularly suitable for the level II plots of ICP Forests.
The processes were described at a scale that facilitates the comparison
between model predictions and observations. Many data collected in these
plots can be used to initialize and run the model or to calibrate and
evaluate it. HETEROFOR can also be seen as a tool for integrating forest
monitoring data and quantifying non-measured processes. While it is now
calibrated for oak and beech forests, HETEROFOR will be parameterized for a
large range of tree species in order to use it for testing and reproducing
identity and diversity effects.</p>
      <p id="d1e7316">Given all of the uncertainties related to climate change impacts, it is unrealistic to believe that a model will accurately predict the future dynamics
of forest growth. However, models such as HETEROFOR can be very useful to
compare scenarios. Among others purposes, HETEROFOR can be used to select the
management options that maximize ecosystem resilience or to quantify
uncertainty in the response of forest ecosystem to climate change.</p><?xmltex \hack{\clearpage}?>
</sec>

      
      </body>
    <back><app-group>

<?pagebreak page927?><app id="App1.Ch1.S1">
  <?xmltex \currentcnt{A}?><label>Appendix A</label><title>Description of the soil heat transfer routine</title>
      <p id="d1e7331">The temperature of the mineral soil (<inline-formula><mml:math id="M317" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>; in degrees Celsius) is calculated by
soil depth increment (<inline-formula><mml:math id="M318" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula>; in metres) using a simplification of the soil
heat transfer equation assuming a constant thermal diffusivity (<inline-formula><mml:math id="M319" display="inline"><mml:mi>D</mml:mi></mml:math></inline-formula>; in
square metres per second) across the soil profile. The thermal diffusivity
characterizes the rate of heat transfer within the soil and corresponds to
the ratio of the thermal conductivity (<inline-formula><mml:math id="M320" display="inline"><mml:mi>K</mml:mi></mml:math></inline-formula>; in watts per metre per kelvin) to the
volumetric heat capacity (<inline-formula><mml:math id="M321" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mtext>v</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; in joules per cubic metre per kelvin).
          <disp-formula id="App1.Ch1.S1.E50" content-type="numbered"><label>A1</label><mml:math id="M322" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>T</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>⋅</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>⋅</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mi>K</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>T</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>=</mml:mo><mml:mo>&gt;</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>T</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi>D</mml:mi><mml:mo>⋅</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mo>∂</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mi>T</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>z</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>
        Eq. (A1) can be rewritten according to Anlauf and Liu (1990) and
Baker and Don Scott (1998) as follows:
          <disp-formula id="App1.Ch1.S1.E51" content-type="numbered"><label>A2</label><mml:math id="M323" display="block"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>z</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>z</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:msub><mml:mo>+</mml:mo><mml:mi>D</mml:mi><mml:mo>⋅</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>z</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>⋅</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>z</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>z</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>z</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
        The soil depth increment can be chosen by the user, but it has to be smaller
than one-third of the thinnest horizon. The soil depth increment can be
slightly modified by the model to ensure that the soil depth is a multiple of the
soil depth increment. Then, a stability criterion is checked for each hour,
and if it is not respected, the temporal step is divided by two.
          <disp-formula id="App1.Ch1.S1.E52" content-type="numbered"><label>A3</label><mml:math id="M324" display="block"><mml:mrow><mml:mi>K</mml:mi><mml:mo>⋅</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>T</mml:mi></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>z</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></disp-formula>
        The thermal diffusivity is calculated for each soil horizon based on the
thermal conductivity and the volumetric heat capacity and then averaged by
weighing according the horizon thickness. The thermal conductivity is
obtained with the empirical model of Kersten (1949) as follows:

              <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M325" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="App1.Ch1.S1.E53"><mml:mtd><mml:mtext>A4</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mtable class="split" columnspacing="1em" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mi>K</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.1442</mml:mn><mml:mo>⋅</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">0.9</mml:mn><mml:mo>⋅</mml:mo><mml:mi>log⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mi mathvariant="italic">ϑ</mml:mi></mml:mfenced><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:mfenced><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mn mathvariant="normal">0.6243</mml:mn><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">b</mml:mi></mml:msub></mml:mrow></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mfenced close=")" open="("><mml:mtext>for silt or clay soils</mml:mtext></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S1.E54"><mml:mtd><mml:mtext>A5</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mtable class="split" columnspacing="1em" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mi>K</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.1442</mml:mn><mml:mo>⋅</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mn mathvariant="normal">0.7</mml:mn><mml:mo>⋅</mml:mo><mml:mi>log⁡</mml:mi><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ϑ</mml:mi></mml:mfenced><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.4</mml:mn></mml:mrow></mml:mfenced><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mn mathvariant="normal">0.6243</mml:mn><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">b</mml:mi></mml:msub></mml:mrow></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mfenced close=")" open="("><mml:mtext>for sandy soils</mml:mtext></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

          with <inline-formula><mml:math id="M326" display="inline"><mml:mi mathvariant="italic">ϑ</mml:mi></mml:math></inline-formula>, the gravimetric soil water content (in grams per gram), and
<inline-formula><mml:math id="M327" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">b</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></inline-formula> the bulk density (in kilograms per cubic metre)</p>
      <p id="d1e7753">The volumetric heat capacity of soils is approximated through a separation
of the soil constituents in solid and liquid phases as follows:
          <disp-formula id="App1.Ch1.S1.E55" content-type="numbered"><label>A6</label><mml:math id="M328" display="block"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mo>≃</mml:mo><mml:mn mathvariant="normal">836</mml:mn><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">b</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:mn mathvariant="normal">4180</mml:mn><mml:mo>⋅</mml:mo><mml:mi mathvariant="italic">ϑ</mml:mi><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">b</mml:mi></mml:msub><mml:mo>⋅</mml:mo><mml:mn mathvariant="normal">1000</mml:mn><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">w</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        with <inline-formula><mml:math id="M329" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">w</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, the volumetric mass of water
(in kilograms per cubic metre).</p>
      <p id="d1e7818">To initialize the procedure, the top and bottom temperature during the whole
simulation and the initial temperature at each soil depth must be known. The
soil temperature at the top of the mineral soil (just under the forest
floor) is given by Eq. (A7) adapted from van Wijk and de Vries (1963) and
Cichota et al. (2004). The bottom temperature is fixed and corresponds to
the mean annual air temperature. This assumption can be made as the soil
depth largely exceeds 1 m. The initial temperature is found through a
simple interpolation of the temperatures between the soil interface and the
bottom.
          <disp-formula id="App1.Ch1.S1.E56" content-type="numbered"><label>A7</label><mml:math id="M330" display="block"><mml:mtable class="split" rowspacing="0.2ex" columnspacing="1em" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mspace width="0.25em" linebreak="nobreak"/><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>y</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mrow><mml:mi>d</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:mfenced></mml:mrow><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>⋅</mml:mo><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">soil</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="normal">red</mml:mi><mml:mi>d</mml:mi></mml:msub></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>⋅</mml:mo><mml:mi>sin⁡</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="italic">ω</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mi>t</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">max</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi mathvariant="italic">π</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ω</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi></mml:mrow><mml:mi mathvariant="normal">Damping</mml:mi></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
        with <inline-formula><mml:math id="M331" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, mean annual air temperature (in degrees Celsius),
<inline-formula><mml:math id="M332" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mrow><mml:mi>d</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></inline-formula> mean air temperature of the previous day
(in degrees Celsius), <inline-formula><mml:math id="M333" display="inline"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></inline-formula> annual air temperature amplitude corresponding to the difference between the maximum and the minimum mean daily temperature over the year (in degrees Celsius),
<inline-formula><mml:math id="M334" display="inline"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">soil</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></inline-formula> a parameter corresponding to the mean annual soil
temperature amplitude (in degrees Celsius),
<inline-formula><mml:math id="M335" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></inline-formula> daily air temperature amplitude
<inline-formula><mml:math id="M336" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">max</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">min</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>
calculated over the 24 h period centred on the considered time
(<inline-formula><mml:math id="M337" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C),
<inline-formula><mml:math id="M338" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">red</mml:mi><mml:mi>d</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></inline-formula> parameter reducing the daily air temperature
amplitude to the daily soil temperature amplitude (fixed to 0.13),
<inline-formula><mml:math id="M339" display="inline"><mml:mi mathvariant="italic">ω</mml:mi></mml:math></inline-formula>, radial frequency (per hour) is <inline-formula><mml:math id="M340" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">π</mml:mi></mml:mrow><mml:mn mathvariant="normal">24</mml:mn></mml:mfrac></mml:mstyle></mml:math></inline-formula>, <inline-formula><mml:math id="M341" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">max</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, hour of the day at which air
temperature is maximal (as the sinusoidal shape of the diurnal soil
temperature cycle is not perfectly symmetric,
<inline-formula><mml:math id="M342" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">max</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is adapted so that the period
between maximum and minimum soil temperature is exactly 12 h),
<inline-formula><mml:math id="M343" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula>, thickness of organic horizons (in metres), and
Damping, a parameter accounting for the phase shift between the diurnal cycle
of the air and soil temperature (fixed to 0.0853 after calibration).</p>
      <?pagebreak page928?><p id="d1e8141">The temperature of the organic horizons was obtained as the mean between air
temperature and the temperature at the interface between organic horizons
and mineral soil.<?xmltex \hack{\newpage}?></p>
</app>

<app id="App1.Ch1.S2">
  <?xmltex \currentcnt{B}?><label>Appendix B</label><title>Development of Eq. (29)</title>
      <p id="d1e8153">Equation (29) can be developed in order to isolate <inline-formula><mml:math id="M344" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> as follows:

              <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M345" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="App1.Ch1.S2.E57"><mml:mtd><mml:mtext>B1</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mtable rowspacing="0.2ex" columnspacing="1em" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mfenced><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>(</mml:mo><mml:mtext>dbh</mml:mtext><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mo>(</mml:mo><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mfenced><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mfenced open="(" close=")"><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>⋅</mml:mo><mml:mtext>dbh</mml:mtext><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>⋅</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S2.E58"><mml:mtd><mml:mtext>B2</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mtable columnspacing="1em" rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mfenced><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>⋅</mml:mo><mml:mtext>dbh</mml:mtext><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>⋅</mml:mo><mml:mtext>dbh</mml:mtext><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mo>(</mml:mo><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>⋅</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S2.E59"><mml:mtd><mml:mtext>B3</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mtable class="split" rowspacing="0.2ex" columnspacing="1em" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mfenced><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi><mml:mo>⋅</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>⋅</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

          Considering <inline-formula><mml:math id="M346" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mtext>dbh</mml:mtext><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>≪</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>≪</mml:mo><mml:mtext>dbh</mml:mtext></mml:mrow></mml:math></inline-formula>, an approximation can be done as follows:

              <disp-formula specific-use="align" content-type="numbered"><mml:math id="M347" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="App1.Ch1.S2.E60"><mml:mtd><mml:mtext>B4</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mfenced><mml:mo>≅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi><mml:mo>⋅</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mi>h</mml:mi><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S2.E61"><mml:mtd><mml:mtext>B5</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi><mml:mo>⋅</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>≅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:mi>h</mml:mi><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S2.E62"><mml:mtd><mml:mtext>B6</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>h</mml:mi><mml:mo>≅</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mfenced></mml:mrow><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>h</mml:mi><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p><?xmltex \hack{\clearpage}?>
</app>

<?pagebreak page929?><app id="App1.Ch1.S3">
  <?xmltex \currentcnt{C}?><label>Appendix C</label><title>Delevoy height estimation</title>
      <p id="d1e8848">The Delevoy height is the height at which stem diameter is half the diameter
at breast height and is calculated from taper (in centimetres per metre) as follows:
          <disp-formula id="App1.Ch1.S3.E63" content-type="numbered"><label>C1</label><mml:math id="M348" display="block"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mtext>del</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.3</mml:mn><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mtext>dbh</mml:mtext><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mrow><mml:mtext>taper</mml:mtext></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where the taper is obtained based on the girth at 10 % of the tree height
(G10%) and the relative girth at 60 % of the tree height (RG60%) for
which empirical equations are provided by Dagnelie et al. (1999) for several
temperate tree species.
          <disp-formula id="App1.Ch1.S3.E64" content-type="numbered"><label>C2</label><mml:math id="M349" display="block"><mml:mrow><mml:mtext>taper</mml:mtext><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mfenced close=")" open="("><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mtext>CR60%</mml:mtext></mml:mrow></mml:mfenced><mml:mo>⋅</mml:mo><mml:mtext>C10%</mml:mtext></mml:mrow><mml:mrow><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi><mml:mo>⋅</mml:mo><mml:mi mathvariant="italic">π</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        with

              <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M350" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="App1.Ch1.S3.E65"><mml:mtd><mml:mtext>C3</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mtable class="split" rowspacing="0.2ex" columnspacing="1em" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mtext>C10%</mml:mtext><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi>a</mml:mi><mml:mo>+</mml:mo><mml:mi>b</mml:mi><mml:mo>⋅</mml:mo><mml:mi mathvariant="italic">π</mml:mi><mml:mo>⋅</mml:mo><mml:mtext>dbh</mml:mtext><mml:mo>+</mml:mo><mml:mi>c</mml:mi><mml:mo>⋅</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="italic">π</mml:mi><mml:mo>⋅</mml:mo><mml:mtext>dbh</mml:mtext></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mi>d</mml:mi><mml:mo>⋅</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">π</mml:mi><mml:mo>⋅</mml:mo><mml:mtext>dbh</mml:mtext><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>+</mml:mo><mml:mi>e</mml:mi><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi><mml:mo>+</mml:mo><mml:mi>f</mml:mi><mml:mo>⋅</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">π</mml:mi><mml:mo>⋅</mml:mo><mml:mtext>dbh</mml:mtext><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>⋅</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S3.E66"><mml:mtd><mml:mtext>C4</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mtext>CR60%</mml:mtext><mml:mo>=</mml:mo><mml:mi>a</mml:mi><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>b</mml:mi><mml:mtext>C10%</mml:mtext></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>c</mml:mi><mml:mrow><mml:msup><mml:mtext>C10%</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p>

<?xmltex \floatpos{t}?><table-wrap id="App1.Ch1.S3.T5"><?xmltex \hack{\hsize\textwidth}?><?xmltex \currentcnt{C1}?><label>Table C1</label><caption><p id="d1e9072">Parameters of Eqs. (C3) and (C4) for sessile oak and European beech according to Dagnelie et al. (1999).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="center"/>
     <oasis:colspec colnum="6" colname="col6" align="center"/>
     <oasis:colspec colnum="7" colname="col7" align="center"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M351" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M352" display="inline"><mml:mi>b</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M353" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M354" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M355" display="inline"><mml:mi>e</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M356" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col7">Sessile oak </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C10%</oasis:entry>
         <oasis:entry colname="col2">3.9330</oasis:entry>
         <oasis:entry colname="col3">1.0284</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M357" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.31611</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M358" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.44036</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M359" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.33113</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M360" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.28051</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">CR60%</oasis:entry>
         <oasis:entry colname="col2">0.4838</oasis:entry>
         <oasis:entry colname="col3">14.667</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M361" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">405.67</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col7">European beech </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C10%</oasis:entry>
         <oasis:entry colname="col2">3.8541</oasis:entry>
         <oasis:entry colname="col3">1.0235</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M362" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.36276</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M363" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.40063</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M364" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.30551</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M365" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.20411</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CR60%</oasis:entry>
         <oasis:entry colname="col2">0.5286</oasis:entry>
         <oasis:entry colname="col3">0</oasis:entry>
         <oasis:entry colname="col4">0</oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \hack{\clearpage}?>
</app>

<?pagebreak page930?><app id="App1.Ch1.S4">
  <?xmltex \currentcnt{D}?><label>Appendix D</label><title>Estimation of the height of largest crown extension
(hlce) at equilibrium</title>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S4.F7"><?xmltex \currentcnt{D1}?><label>Figure D1</label><caption><p id="d1e9402">Illustration of the routine used to determine the height of
largest crown extension at equilibrium (hlce<inline-formula><mml:math id="M366" display="inline"><mml:msub><mml:mi/><mml:mtext>eq</mml:mtext></mml:msub></mml:math></inline-formula>) of a target tree in three contrasting situations of competition. A first step consists in determining
the intersection between the potential crown of the target tree and the
competitor. Then, the hlce<inline-formula><mml:math id="M367" display="inline"><mml:msub><mml:mi/><mml:mtext>eq</mml:mtext></mml:msub></mml:math></inline-formula> is fixed between the maximum hlce (corresponding to the intersection between potential crowns) and the minimum hlce (which is the height to crown base) based on the relative height of the competitor.</p></caption>
        <?xmltex \hack{\hsize\textwidth}?>
        <?xmltex \igopts{width=284.527559pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/905/2020/gmd-13-905-2020-f07.png"/>

      </fig>

<?xmltex \hack{\clearpage}?>
</app>

<?pagebreak page931?><app id="App1.Ch1.S5">
  <?xmltex \currentcnt{E}?><label>Appendix E</label><title>Height growth modelling results</title>
      <p id="d1e9441">The main factor explaining the height increment was the so-called height
growth potential (<inline-formula><mml:math id="M368" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>h</mml:mi><mml:mtext>pot</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>), with a quadratic effect for beech and a cubic effect for oak (Table E1 and Fig. E1). For both tree species, the light competition index (LCI) had a negative effect on the height increment, meaning that, for a same-height growth potential, trees under stronger competition for light had a higher height growth than trees within better light conditions. For the European beech, the variable selection procedure
selected height (which had a negative effect) to account for tree size, while
dbh was retained for sessile oak and had a positive effect. Even if the root-mean-square error was slightly higher for European beech (0.094) than for sessile oak (0.083), the height growth model explained a much larger
proportion of the variability in European beeches (72 %) than in sessile
oaks (43 %). This is partly because the height growth range was higher for European beeches.</p>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S5.F8"><?xmltex \currentcnt{E1}?><label>Figure E1</label><caption><p id="d1e9459">Effect of the height growth potential on oak and beech height
growth for two levels of light competition (strong light competition <inline-formula><mml:math id="M369" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula>
light competition index <inline-formula><mml:math id="M370" display="inline"><mml:mo>≤</mml:mo></mml:math></inline-formula> 0.15, lower light competition <inline-formula><mml:math id="M371" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> light
competition index <inline-formula><mml:math id="M372" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 0.15). The solid lines represent the model
predictions obtained using Eq. (31) with parameter values of Table E1 and with mean values for dbh, height or the light competition index.</p></caption>
        <?xmltex \hack{\hsize\textwidth}?>
        <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/905/2020/gmd-13-905-2020-f08.png"/>

      </fig>

<?xmltex \hack{\newpage}?><?xmltex \floatpos{th!}?><table-wrap id="App1.Ch1.S5.T6"><?xmltex \currentcnt{E1}?><label>Table E1</label><caption><p id="d1e9503">Parameters, <inline-formula><mml:math id="M373" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> and RMSE of the height growth model
(Eq. 31) for European beech and sessile oak.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">European beech</oasis:entry>
         <oasis:entry colname="col3">Sessile oak</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Intercept</oasis:entry>
         <oasis:entry colname="col2">0.0233</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M374" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.0562</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">dbh (in centimetres)</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">0.0023</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M375" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula> (in metres)</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M376" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.0048</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">LCI</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M377" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.2556</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M378" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.1874</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">(<inline-formula><mml:math id="M379" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mi>h</mml:mi><mml:mtext>tot</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>/</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> (in metres)</oasis:entry>
         <oasis:entry colname="col2">0.6631</oasis:entry>
         <oasis:entry colname="col3">0.8183</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">[(<inline-formula><mml:math id="M380" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mi>h</mml:mi><mml:mtext>tot</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>/</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msup><mml:mo>]</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M381" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.1777</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M382" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.9178</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">[(<inline-formula><mml:math id="M383" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mi>h</mml:mi><mml:mtext>tot</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>/</mml:mo><mml:msup><mml:mtext>dbh</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msup><mml:mo>]</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">0.4733</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">RMSE</oasis:entry>
         <oasis:entry colname="col2">0.09397</oasis:entry>
         <oasis:entry colname="col3">0.083017</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M384" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.72</oasis:entry>
         <oasis:entry colname="col3">0.43</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \hack{\clearpage}?>
</app>
  </app-group><notes notes-type="codeavailability"><title>Code availability</title>

      <p id="d1e9809">The source codes of Capsis and HETEROFOR are accessible to all of the members of the Capsis co-development community. Those who want to join this community are welcome but must contact François de Coligny (coligny@cirad.fr) and sign the Capsis charter (<uri>http://capsis.cirad.fr/capsis/charter</uri>, last access: 29 February 2020). This charter grants access on all the models to the modellers of the Capsis community. The modellers may
distribute the Capsis platform with their own model but not with the models
of the others without their agreement. Capsis4 is a free software (LGPL
licence) which includes the kernel, the generic pilots, the extensions and
the libraries. For HETEROFOR, we also choose an LGPL license and decided to
freely distribute it through an installer containing the Capsis4 kernel and
the latest version (or any previous one) of HETEROFOR upon request from
Mathieu Jonard (mathieu.jonard@uclouvain.be). The version 1.0
used for this paper is available at <uri>http://amap-dev.cirad.fr/projects/capsis/files</uri> (last access: 29 February 2020, Jonard et al., 2020). The end users can install Capsis from an installer containing only the HETEROFOR model, while the modellers who signed the Capsis charter can access to the complete version of Capsis with all of the models. Depending on your status (end user vs
modeller or developer), the instructions to install Capsis are given on the
Capsis website (<uri>http://capsis.cirad.fr/capsis/documentation</uri>, last access: 29 February 2020).</p>

      <p id="d1e9821">The source code for the modules published in <italic>Geoscientific Model Development</italic>
can be downloaded from <ext-link xlink:href="https://doi.org/10.5281/zenodo.3591348" ext-link-type="DOI">10.5281/zenodo.3591348</ext-link> (Jonard et al., 2019).</p>
  </notes><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e9833">The data used in this paper are available through the input files for HETEROFOR which are embedded in the installer (see Code availability).</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d1e9836">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/gmd-13-905-2020-supplement" xlink:title="pdf">https://doi.org/10.5194/gmd-13-905-2020-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e9845">MJ, FA, FdC, LdW, NB and HD developed the model code. FA carried out the
calibration. MJ, FA and LdW performed the simulations and analysed the model
outputs. MJ prepared the paper with contributions from all coauthors.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e9851">The authors declare that they have no conflict of interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e9857">We are grateful to
the RMI (Royal Meteorological Institute of Belgium) for providing us climate
projection data for the Baileux site. We also would like to thank the four
anonymous reviewers for their constructive comments which helped us to
significantly improve the quality of the paper.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e9862">This research has been supported by the Service Public de Wallonie (SPW/DGO 3/DNF) (Accord-Cadre de Recherche et Vulgarisation Forestières 2014–2019), the Fonds de la Recherche Scientifique – FNRS (PDR-WISD grant no. 09; the SustainFor project) and the Fonds de la Recherche Scientifique – FNRS, Fonds pour la Formation à la Recherche dans l'Industrie et dans l'Agriculture (grant no. 1.E005.18).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e9868">This paper was edited by Min-Hui Lo and reviewed by Rüdiger Grote and three anonymous referees.</p>
  </notes><ref-list>
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    <!--<article-title-html>HETEROFOR 1.0: a spatially explicit model for exploring the response of structurally complex forests to uncertain future conditions – Part 1: Carbon fluxes and tree dimensional growth</article-title-html>
<abstract-html><p>Given the multiple abiotic and biotic stressors resulting from global
changes, management systems and practices must be adapted in order to
maintain and reinforce the resilience of forests. Among others, the
transformation of monocultures into uneven-aged and mixed stands is an
avenue to improve forest resilience. To explore the forest response to these new silvicultural practices under a changing environment, one needs models combining a process-based approach with a detailed spatial representation, which is quite rare.</p><p>We therefore decided to develop our own model (HETEROFOR for HETEROgeneous
FORest) according to a spatially explicit approach, describing individual
tree growth based on resource sharing (light, water and nutrients).
HETEROFOR was progressively elaborated within Capsis (Computer-Aided
Projection for Strategies in Silviculture), a collaborative modelling
platform devoted to tree growth and stand dynamics.</p><p>This paper describes the carbon-related processes of HETEROFOR
(photosynthesis, respiration, carbon allocation and tree dimensional growth) and evaluates the model performances for three broadleaved stands with different species compositions (Wallonia, Belgium). This first evaluation
showed that HETEROFOR predicts well individual radial growth (Pearson's
correlation of 0.83 and 0.63 for the European beech and sessile oak,
respectively) and is able to reproduce size–growth relationships. We also
noticed that the net to gross primary production (npp to gpp) ratio option for describing maintenance
respiration provides better results than the temperature-dependent routine,
while the process-based (Farquhar model) and empirical (radiation use
efficiency) approaches perform similarly for photosynthesis. To illustrate
how the model can be used to predict climate change impacts on forest
ecosystems, we simulated the growth dynamics of the mixed stand driven by
three IPCC climate scenarios. According to these simulations, the tree growth trends will be governed by the CO<sub>2</sub> fertilization effect, with the increase in vegetation period length and the increase in water stress also playing a role but offsetting each other.</p></abstract-html>
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