Articles | Volume 17, issue 13
https://doi.org/10.5194/gmd-17-5191-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-17-5191-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Model description paper
| 
08 Jul 2024
Model description paper |
| 08 Jul 2024
| 08 Jul 2024
Linking global terrestrial and ocean biogeochemistry with process-based, coupled freshwater algae–nutrient–solid dynamics in LM3-FANSY v1.0
Minjin Lee
CORRESPONDING AUTHOR
Program in Atmospheric and Oceanic Sciences, Princeton University, Princeton, NJ 08540, USA
Charles A. Stock
NOAA/Geophysical Fluid Dynamics Laboratory, Princeton, NJ 08540, USA
John P. Dunne
NOAA/Geophysical Fluid Dynamics Laboratory, Princeton, NJ 08540, USA
Elena Shevliakova
NOAA/Geophysical Fluid Dynamics Laboratory, Princeton, NJ 08540, USA
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Meena Raju, David J. Cannon, Peter Alsip, He Wang, Jia Wang, Theresa Cordero, Robert W. Hallberg, Charles A. Stock, and Joseph A. Langan
Geosci. Model Dev., 19, 4331–4356, https://doi.org/10.5194/gmd-19-4331-2026, https://doi.org/10.5194/gmd-19-4331-2026, 2026
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This study developed the Modular Ocean Model version 6.0 coupled with Sea Ice Simulator version 2.0 for the Great Lakes, validated against observations and an operational model. This study also tested two vertical coordinate systems, z* and hybrid. The model reproduced lake physics with good skill. The hybrid vertical coordinate improved thermocline representation and preserved deep cold-water during stratification, demonstrating the model’s suitability for large freshwater systems.
Joseph Mouallem, Sergey Malyshev, Zhihong Tan, Elena Shevliakova, Kun Gao, Lucas Harris, Rusty Benson, William Cooke, Niki Zadeh, and Lauren Chilutti
EGUsphere, https://doi.org/10.5194/egusphere-2026-2014, https://doi.org/10.5194/egusphere-2026-2014, 2026
This preprint is open for discussion and under review for Geoscientific Model Development (GMD).
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We integrate GFDL's land model in the high resolution global atmospheric model SHiELD, unlocking new capabilities in simulating new suite of land-atmosphere conditions and extreme hydrological processes such as flooding. Simulations of hurricane Helene's 2024 landfall demonstrate that the model realistically captures soil saturation, runoff generation and river flooding in Western North Carolina.
Benjamin M. Sanderson, Marit Sandstad, Alejandro Romero-Prieto, Stuart Jenkins, Charles Koven, Glen Peters, Roland Séfèrian, Andrew H. MacDougall, Ashwin Seshadri, Victor Brovkin, John Dunne, Abigail L. S. Swann, Torben Koenigk, Rosie A. Fisher, David Hohn, Tatiana Ilyina, Chris D. Jones, Hongmei Li, Peter Lawrence, Spencer Liddicoat, Nadine Mengis, Anastasia Romanou, Lori T. Sentman, Chris Smith, Norman J. Steinert, Jerry Tjiputra, and Tilo Ziehn
EGUsphere, https://doi.org/10.5194/egusphere-2026-1875, https://doi.org/10.5194/egusphere-2026-1875, 2026
This preprint is open for discussion and under review for Earth System Dynamics (ESD).
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When humanity stops emitting carbon dioxide, will temperatures keep rising, stabilize, or fall? Our study reveals in most models, temperatures remain nearly stable, but this hides a balance between the warming in response to radiation imbalance, and the cooling due to uptake of carbon in the land and ocean. Understanding this balance helps refine how much more CO2 we can safely emit.
Vimal Koul, Andrew Ross, Charles Stock, Liping Zhang, Andrew Wittenberg, and Thomas Delworth
EGUsphere, https://doi.org/10.5194/egusphere-2026-481, https://doi.org/10.5194/egusphere-2026-481, 2026
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Predicting coastal ocean conditions years ahead has been difficult due to complex regional dynamics. This work shows we can forecast bottom temperature, oxygen, and acidity up to a decade ahead for the Northeast U.S. Shelf. Our forecasts indicate increasing Labrador water may accelerate acidification, threatening shell-forming organisms. This provides a foundation for early warning systems to help communities and fisheries adapt proactively.
Dongmin Kim, Andrew C. Ross, Sang-Ik Shin, Fabian A. Gomez, Jasmin G. John, Denis L. Volkov, Sang-Ki Lee, Michael A. Alexander, and Charles A. Stock
EGUsphere, https://doi.org/10.5194/egusphere-2025-6449, https://doi.org/10.5194/egusphere-2025-6449, 2026
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Using high-resolution MOM6, we projected Northwest Atlantic changes under four SSP scenarios. Results show a weakening Gulf Stream reduces upwelling, causing significant shelf warming and salinification. This also leads to dynamic sea-level rise along the U.S. East Coast, particularly in the South Atlantic Bight, with critical implications for marine ecosystems and coastal risks.
Vivek Seelanki, Wei Cheng, Phyllis J. Stabeno, Albert J. Hermann, Elizabeth J. Drenkard, Charles A. Stock, and Katherine Hedstrom
Geosci. Model Dev., 18, 7681–7705, https://doi.org/10.5194/gmd-18-7681-2025, https://doi.org/10.5194/gmd-18-7681-2025, 2025
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Both physical and ecosystem properties of the ocean are rapidly changing. These changes anticipating ecosystem responses to environmental change and effectively managing marine. The model-based predictions and their performance in the historical states of the ocean must be carefully evaluated against observations. In this study a coupled ocean and sea-ice simulation during 1993–2018 using observations. We focus on the Bering Sea shelf, which is the largest productive ecosystem in the US.
John P. Dunne, Helene T. Hewitt, Julie M. Arblaster, Frédéric Bonou, Olivier Boucher, Tereza Cavazos, Beth Dingley, Paul J. Durack, Birgit Hassler, Martin Juckes, Tomoki Miyakawa, Matt Mizielinski, Vaishali Naik, Zebedee Nicholls, Eleanor O'Rourke, Robert Pincus, Benjamin M. Sanderson, Isla R. Simpson, and Karl E. Taylor
Geosci. Model Dev., 18, 6671–6700, https://doi.org/10.5194/gmd-18-6671-2025, https://doi.org/10.5194/gmd-18-6671-2025, 2025
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The seventh phase of the Coupled Model Intercomparison Project (CMIP7) coordinates efforts to answer key and timely climate science questions and facilitate delivery of relevant multi-model simulations for prediction and projection; characterization, attribution, and process understanding; and vulnerability, impact, and adaptation analysis. Key to the CMIP7 design are the mandatory Diagnostic, Evaluation and Characterization of Klima and optional Assessment Fast Track experiments.
Enhui Liao, Laure Resplandy, Fan Yang, Yangyang Zhao, Sam Ditkovsky, Manon Malsang, Jenna Pearson, Andrew C. Ross, Robert Hallberg, and Charles Stock
Geosci. Model Dev., 18, 6553–6596, https://doi.org/10.5194/gmd-18-6553-2025, https://doi.org/10.5194/gmd-18-6553-2025, 2025
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The northern Indian Ocean is central to the livelihoods and economies of countries that comprise about one-third of the world's population. We present a high-resolution (~10 km) ocean model that simulates seasonal and year-to-year variability in ocean, including currents, oxygen levels, and phytoplankton growth. This model is a powerful tool to study how climate change and human activities influence the northern Indian Ocean, which can be used for marine resource applications and management.
Colin Jones, Isaline Bossert, Donovan P. Dennis, Hazel Jeffery, Chris D. Jones, Torben Koenigk, Sina Loriani, Benjamin Sanderson, Roland Séférian, Klaus Wyser, Shuting Yang, Manabu Abe, Sebastian Bathiany, Pascale Braconnot, Victor Brovkin, Friedrich A. Burger, Patrica Cadule, Frederic S. Castruccio, Gokhan Danabasoglu, Andrea Dittus, Jonathan F. Donges, Friederike Fröb, Thomas Frölicher, Goran Georgievski, Chuncheng Guo, Aixue Hu, Peter Lawrence, Paul Lerner, José Licón-Saláiz, Bette Otto-Bliesner, Anastasia Romanou, Elena Shevliakova, Yona Silvy, Didier Swingedouw, Jerry Tjiputra, Jeremy Walton, Andy Wiltshire, Ricarda Winkelmann, Richard Wood, Tokuta Yokohata, and Tilo Ziehn
EGUsphere, https://doi.org/10.5194/egusphere-2025-3604, https://doi.org/10.5194/egusphere-2025-3604, 2025
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We introduce a new Earth system model experiment protocol to help researchers understand how Earth might respond to positive, zero, and negative carbon emissions. This protocol enables different models to be compared following similar warming and cooling rates. Researchers use the models to explore how the Earth reacts to different climate futures, including the risk of tipping points being exceeded and whether changes can be reversed. The results will support improved long-term climate policy.
Elizabeth J. Drenkard, Charles A. Stock, Andrew C. Ross, Yi-Cheng Teng, Theresa Cordero, Wei Cheng, Alistair Adcroft, Enrique Curchitser, Raphael Dussin, Robert Hallberg, Claudine Hauri, Katherine Hedstrom, Albert Hermann, Michael G. Jacox, Kelly A. Kearney, Rémi Pagès, Darren J. Pilcher, Mercedes Pozo Buil, Vivek Seelanki, and Niki Zadeh
Geosci. Model Dev., 18, 5245–5290, https://doi.org/10.5194/gmd-18-5245-2025, https://doi.org/10.5194/gmd-18-5245-2025, 2025
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We made a new regional ocean model to assist fisheries and ecosystem managers in making decisions in the Northeast Pacific Ocean (NEP). We found that the model did well simulating past ocean conditions like temperature and nutrient and oxygen levels and can even reproduce metrics used by, and important to, ecosystem managers.
Forrest M. Hoffman, Birgit Hassler, Ranjini Swaminathan, Jared Lewis, Bouwe Andela, Nathaniel Collier, Dóra Hegedűs, Jiwoo Lee, Charlotte Pascoe, Mika Pflüger, Martina Stockhause, Paul Ullrich, Min Xu, Lisa Bock, Felicity Chun, Bettina K. Gier, Douglas I. Kelley, Axel Lauer, Julien Lenhardt, Manuel Schlund, Mohanan G. Sreeush, Katja Weigel, Ed Blockley, Rebecca Beadling, Romain Beucher, Demiso D. Dugassa, Valerio Lembo, Jianhua Lu, Swen Brands, Jerry Tjiputra, Elizaveta Malinina, Brian Mederios, Enrico Scoccimarro, Jeremy Walton, Philip Kershaw, André L. Marquez, Malcolm J. Roberts, Eleanor O’Rourke, Elisabeth Dingley, Briony Turner, Helene Hewitt, and John P. Dunne
EGUsphere, https://doi.org/10.5194/egusphere-2025-2685, https://doi.org/10.5194/egusphere-2025-2685, 2025
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As Earth system models become more complex, rapid and comprehensive evaluation through comparison with observational data is necessary. The upcoming Assessment Fast Track for the Seventh Phase of the Coupled Model Intercomparison Project (CMIP7) will require fast analysis. This paper describes a new Rapid Evaluation Framework (REF) that was developed for the Assessment Fast Track that will be run at the Earth System Grid Federation (ESGF) to inform the community about the performance of models.
Amali A. Amali, Clemens Schwingshackl, Akihiko Ito, Alina Barbu, Christine Delire, Daniele Peano, David M. Lawrence, David Wårlind, Eddy Robertson, Edouard L. Davin, Elena Shevliakova, Ian N. Harman, Nicolas Vuichard, Paul A. Miller, Peter J. Lawrence, Tilo Ziehn, Tomohiro Hajima, Victor Brovkin, Yanwu Zhang, Vivek K. Arora, and Julia Pongratz
Earth Syst. Dynam., 16, 803–840, https://doi.org/10.5194/esd-16-803-2025, https://doi.org/10.5194/esd-16-803-2025, 2025
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Our study explored the impact of anthropogenic land-use change (LUC) on climate dynamics, focusing on biogeophysical (BGP) and biogeochemical (BGC) effects using data from the Land Use Model Intercomparison Project (LUMIP) and the Coupled Model Intercomparison Project Phase 6 (CMIP6). We found that LUC-induced carbon emissions contribute to a BGC warming of 0.21 °C, with BGC effects dominating globally over BGP effects, which show regional variability. Our findings highlight discrepancies in model simulations and emphasize the need for improved representations of LUC processes.
Mathieu A. Poupon, Laure Resplandy, Jessica Garwood, Charles Stock, Niki Zadeh, and Jessica Y. Luo
Ocean Sci., 21, 851–875, https://doi.org/10.5194/os-21-851-2025, https://doi.org/10.5194/os-21-851-2025, 2025
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Zooplankton diel vertical migration (DVM) shapes ocean biogeochemical cycles. We present a new DVM model that reproduces migration depths observed in the North Atlantic Ocean. We show that chlorophyll shading contributes to reducing zooplankton migration depth and mainly controls its spatial and temporal variability. Thus, high chlorophyll concentrations may limit carbon sequestration caused by zooplankton migration despite the general abundance of zooplankton migration in these environments.
Minki Hong, Nathaniel Chaney, Sergey Malyshev, Enrico Zorzetto, Anthony Preucil, and Elena Shevliakova
Geosci. Model Dev., 18, 2275–2301, https://doi.org/10.5194/gmd-18-2275-2025, https://doi.org/10.5194/gmd-18-2275-2025, 2025
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This study shows the significance of groundwater in resolving the coupled terrestrial water–energy cycle. LM4-SHARC (soil–hillslope aquifer–river continuum) describes the hillslope groundwater using its emergent properties, yielding noticeable improvements in soil moisture/temperature and groundwater discharge predictions. The implications of groundwater-mediated hydrologic interactions between hillslopes and streams need further exploration in the Earth system modeling community.
Enrico Zorzetto, Paul Ginoux, Sergey Malyshev, and Elena Shevliakova
The Cryosphere, 19, 1313–1334, https://doi.org/10.5194/tc-19-1313-2025, https://doi.org/10.5194/tc-19-1313-2025, 2025
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Light-absorbing particle (LAP) deposition on snow leads to a darkening of the snow surface and can thus accelerate snow melt. Understanding the extent to which different types of LAPs contribute to snow melt is important to both predict changes in water availability and improve global climate model predictions. Here, we extend a recently developed snow model to account for the deposition of LAPs in the snowpack and evaluate the effect of snow darkening on accelerating snow melt.
Tomohiro Hajima, Michio Kawamiya, Akihiko Ito, Kaoru Tachiiri, Chris D. Jones, Vivek Arora, Victor Brovkin, Roland Séférian, Spencer Liddicoat, Pierre Friedlingstein, and Elena Shevliakova
Biogeosciences, 22, 1447–1473, https://doi.org/10.5194/bg-22-1447-2025, https://doi.org/10.5194/bg-22-1447-2025, 2025
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This study analyzes atmospheric CO2 concentrations and global carbon budgets simulated by multiple Earth system models, using several types of simulations (CO2 concentration- and emission-driven experiments). We successfully identified problems with regard to the global carbon budget in each model. We also found urgent issues with regard to land use change CO2 emissions that should be solved in the latest generation of models.
Paul J. Durack, Karl E. Taylor, Peter J. Gleckler, Gerald A. Meehl, Bryan N. Lawrence, Curt Covey, Ronald J. Stouffer, Guillaume Levavasseur, Atef Ben-Nasser, Sebastien Denvil, Martina Stockhause, Jonathan M. Gregory, Martin Juckes, Sasha K. Ames, Fabrizio Antonio, David C. Bader, John P. Dunne, Daniel Ellis, Veronika Eyring, Sandro L. Fiore, Sylvie Joussaume, Philip Kershaw, Jean-Francois Lamarque, Michael Lautenschlager, Jiwoo Lee, Chris F. Mauzey, Matthew Mizielinski, Paola Nassisi, Alessandra Nuzzo, Eleanor O’Rourke, Jeffrey Painter, Gerald L. Potter, Sven Rodriguez, and Dean N. Williams
EGUsphere, https://doi.org/10.5194/egusphere-2024-3729, https://doi.org/10.5194/egusphere-2024-3729, 2025
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CMIP6 was the most expansive and ambitious Model Intercomparison Project (MIP), the latest in a history, extending four decades. CMIP engaged a growing community focused on improving climate understanding, and quantifying and attributing observed climate change being experienced today. The project's profound impact is due to the combining the latest climate science and technology, enabling the latest-generation climate simulations and increasing community attention in every successive phase.
Yona Silvy, Thomas L. Frölicher, Jens Terhaar, Fortunat Joos, Friedrich A. Burger, Fabrice Lacroix, Myles Allen, Raffaele Bernardello, Laurent Bopp, Victor Brovkin, Jonathan R. Buzan, Patricia Cadule, Martin Dix, John Dunne, Pierre Friedlingstein, Goran Georgievski, Tomohiro Hajima, Stuart Jenkins, Michio Kawamiya, Nancy Y. Kiang, Vladimir Lapin, Donghyun Lee, Paul Lerner, Nadine Mengis, Estela A. Monteiro, David Paynter, Glen P. Peters, Anastasia Romanou, Jörg Schwinger, Sarah Sparrow, Eric Stofferahn, Jerry Tjiputra, Etienne Tourigny, and Tilo Ziehn
Earth Syst. Dynam., 15, 1591–1628, https://doi.org/10.5194/esd-15-1591-2024, https://doi.org/10.5194/esd-15-1591-2024, 2024
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The adaptive emission reduction approach is applied with Earth system models to generate temperature stabilization simulations. These simulations provide compatible emission pathways and budgets for a given warming level, uncovering uncertainty ranges previously missing in the Coupled Model Intercomparison Project scenarios. These target-based emission-driven simulations offer a more coherent assessment across models for studying both the carbon cycle and its impacts under climate stabilization.
Andrew C. Ross, Charles A. Stock, Vimal Koul, Thomas L. Delworth, Feiyu Lu, Andrew Wittenberg, and Michael A. Alexander
Ocean Sci., 20, 1631–1656, https://doi.org/10.5194/os-20-1631-2024, https://doi.org/10.5194/os-20-1631-2024, 2024
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In this paper, we use a high-resolution regional ocean model to downscale seasonal ocean forecasts from the Seamless System for Prediction and EArth System Research (SPEAR) model of the Geophysical Fluid Dynamics Laboratory (GFDL). We find that the downscaled model has significantly higher prediction skill in many cases.
Benjamin M. Sanderson, Ben B. B. Booth, John Dunne, Veronika Eyring, Rosie A. Fisher, Pierre Friedlingstein, Matthew J. Gidden, Tomohiro Hajima, Chris D. Jones, Colin G. Jones, Andrew King, Charles D. Koven, David M. Lawrence, Jason Lowe, Nadine Mengis, Glen P. Peters, Joeri Rogelj, Chris Smith, Abigail C. Snyder, Isla R. Simpson, Abigail L. S. Swann, Claudia Tebaldi, Tatiana Ilyina, Carl-Friedrich Schleussner, Roland Séférian, Bjørn H. Samset, Detlef van Vuuren, and Sönke Zaehle
Geosci. Model Dev., 17, 8141–8172, https://doi.org/10.5194/gmd-17-8141-2024, https://doi.org/10.5194/gmd-17-8141-2024, 2024
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We discuss how, in order to provide more relevant guidance for climate policy, coordinated climate experiments should adopt a greater focus on simulations where Earth system models are provided with carbon emissions from fossil fuels together with land use change instructions, rather than past approaches that have largely focused on experiments with prescribed atmospheric carbon dioxide concentrations. We discuss how these goals might be achieved in coordinated climate modeling experiments.
Enrico Zorzetto, Sergey Malyshev, Paul Ginoux, and Elena Shevliakova
Geosci. Model Dev., 17, 7219–7244, https://doi.org/10.5194/gmd-17-7219-2024, https://doi.org/10.5194/gmd-17-7219-2024, 2024
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We describe a new snow scheme developed for use in global climate models, which simulates the interactions of snowpack with vegetation, atmosphere, and soil. We test the new snow model over a set of sites where in situ observations are available. We find that when compared to a simpler snow model, this model improves predictions of seasonal snow and of soil temperature under the snowpack, important variables for simulating both the hydrological cycle and the global climate system.
Mathilde Dugenne, Marco Corrales-Ugalde, Jessica Y. Luo, Rainer Kiko, Todd D. O'Brien, Jean-Olivier Irisson, Fabien Lombard, Lars Stemmann, Charles Stock, Clarissa R. Anderson, Marcel Babin, Nagib Bhairy, Sophie Bonnet, Francois Carlotti, Astrid Cornils, E. Taylor Crockford, Patrick Daniel, Corinne Desnos, Laetitia Drago, Amanda Elineau, Alexis Fischer, Nina Grandrémy, Pierre-Luc Grondin, Lionel Guidi, Cecile Guieu, Helena Hauss, Kendra Hayashi, Jenny A. Huggett, Laetitia Jalabert, Lee Karp-Boss, Kasia M. Kenitz, Raphael M. Kudela, Magali Lescot, Claudie Marec, Andrew McDonnell, Zoe Mériguet, Barbara Niehoff, Margaux Noyon, Thelma Panaïotis, Emily Peacock, Marc Picheral, Emilie Riquier, Collin Roesler, Jean-Baptiste Romagnan, Heidi M. Sosik, Gretchen Spencer, Jan Taucher, Chloé Tilliette, and Marion Vilain
Earth Syst. Sci. Data, 16, 2971–2999, https://doi.org/10.5194/essd-16-2971-2024, https://doi.org/10.5194/essd-16-2971-2024, 2024
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Plankton and particles influence carbon cycling and energy flow in marine ecosystems. We used three types of novel plankton imaging systems to obtain size measurements from a range of plankton and particle sizes and across all major oceans. Data were compiled and cross-calibrated from many thousands of images, showing seasonal and spatial changes in particle size structure in different ocean basins. These datasets form the first release of the Pelagic Size Structure database (PSSdb).
Katja Frieler, Jan Volkholz, Stefan Lange, Jacob Schewe, Matthias Mengel, María del Rocío Rivas López, Christian Otto, Christopher P. O. Reyer, Dirk Nikolaus Karger, Johanna T. Malle, Simon Treu, Christoph Menz, Julia L. Blanchard, Cheryl S. Harrison, Colleen M. Petrik, Tyler D. Eddy, Kelly Ortega-Cisneros, Camilla Novaglio, Yannick Rousseau, Reg A. Watson, Charles Stock, Xiao Liu, Ryan Heneghan, Derek Tittensor, Olivier Maury, Matthias Büchner, Thomas Vogt, Tingting Wang, Fubao Sun, Inga J. Sauer, Johannes Koch, Inne Vanderkelen, Jonas Jägermeyr, Christoph Müller, Sam Rabin, Jochen Klar, Iliusi D. Vega del Valle, Gitta Lasslop, Sarah Chadburn, Eleanor Burke, Angela Gallego-Sala, Noah Smith, Jinfeng Chang, Stijn Hantson, Chantelle Burton, Anne Gädeke, Fang Li, Simon N. Gosling, Hannes Müller Schmied, Fred Hattermann, Jida Wang, Fangfang Yao, Thomas Hickler, Rafael Marcé, Don Pierson, Wim Thiery, Daniel Mercado-Bettín, Robert Ladwig, Ana Isabel Ayala-Zamora, Matthew Forrest, and Michel Bechtold
Geosci. Model Dev., 17, 1–51, https://doi.org/10.5194/gmd-17-1-2024, https://doi.org/10.5194/gmd-17-1-2024, 2024
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Our paper provides an overview of all observational climate-related and socioeconomic forcing data used as input for the impact model evaluation and impact attribution experiments within the third round of the Inter-Sectoral Impact Model Intercomparison Project. The experiments are designed to test our understanding of observed changes in natural and human systems and to quantify to what degree these changes have already been induced by climate change.
Andrew C. Ross, Charles A. Stock, Alistair Adcroft, Enrique Curchitser, Robert Hallberg, Matthew J. Harrison, Katherine Hedstrom, Niki Zadeh, Michael Alexander, Wenhao Chen, Elizabeth J. Drenkard, Hubert du Pontavice, Raphael Dussin, Fabian Gomez, Jasmin G. John, Dujuan Kang, Diane Lavoie, Laure Resplandy, Alizée Roobaert, Vincent Saba, Sang-Ik Shin, Samantha Siedlecki, and James Simkins
Geosci. Model Dev., 16, 6943–6985, https://doi.org/10.5194/gmd-16-6943-2023, https://doi.org/10.5194/gmd-16-6943-2023, 2023
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We evaluate a model for northwest Atlantic Ocean dynamics and biogeochemistry that balances high resolution with computational economy by building on the new regional features in the MOM6 ocean model and COBALT biogeochemical model. We test the model's ability to simulate impactful historical variability and find that the model simulates the mean state and variability of most features well, which suggests the model can provide information to inform living-marine-resource applications.
Weiyi Tang, Bess B. Ward, Michael Beman, Laura Bristow, Darren Clark, Sarah Fawcett, Claudia Frey, François Fripiat, Gerhard J. Herndl, Mhlangabezi Mdutyana, Fabien Paulot, Xuefeng Peng, Alyson E. Santoro, Takuhei Shiozaki, Eva Sintes, Charles Stock, Xin Sun, Xianhui S. Wan, Min N. Xu, and Yao Zhang
Earth Syst. Sci. Data, 15, 5039–5077, https://doi.org/10.5194/essd-15-5039-2023, https://doi.org/10.5194/essd-15-5039-2023, 2023
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Nitrification and nitrifiers play an important role in marine nitrogen and carbon cycles by converting ammonium to nitrite and nitrate. Nitrification could affect microbial community structure, marine productivity, and the production of nitrous oxide – a powerful greenhouse gas. We introduce the newly constructed database of nitrification and nitrifiers in the marine water column and guide future research efforts in field observations and model development of nitrification.
Jonathan D. Sharp, Andrea J. Fassbender, Brendan R. Carter, Gregory C. Johnson, Cristina Schultz, and John P. Dunne
Earth Syst. Sci. Data, 15, 4481–4518, https://doi.org/10.5194/essd-15-4481-2023, https://doi.org/10.5194/essd-15-4481-2023, 2023
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Dissolved oxygen content is a critical metric of ocean health. Recently, expanding fleets of autonomous platforms that measure oxygen in the ocean have produced a wealth of new data. We leverage machine learning to take advantage of this growing global dataset, producing a gridded data product of ocean interior dissolved oxygen at monthly resolution over nearly 2 decades. This work provides novel information for investigations of spatial, seasonal, and interannual variability in ocean oxygen.
Fabian A. Gomez, Sang-Ki Lee, Charles A. Stock, Andrew C. Ross, Laure Resplandy, Samantha A. Siedlecki, Filippos Tagklis, and Joseph E. Salisbury
Earth Syst. Sci. Data, 15, 2223–2234, https://doi.org/10.5194/essd-15-2223-2023, https://doi.org/10.5194/essd-15-2223-2023, 2023
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We present a river chemistry and discharge dataset for 140 rivers in the United States, which integrates information from the Water Quality Database of the US Geological Survey (USGS), the USGS’s Surface-Water Monthly Statistics for the Nation, and the U.S. Army Corps of Engineers. This dataset includes dissolved inorganic carbon and alkalinity, two key properties to characterize the carbonate system, as well as nutrient concentrations, such as nitrate, phosphate, and silica.
Enrico Zorzetto, Sergey Malyshev, Nathaniel Chaney, David Paynter, Raymond Menzel, and Elena Shevliakova
Geosci. Model Dev., 16, 1937–1960, https://doi.org/10.5194/gmd-16-1937-2023, https://doi.org/10.5194/gmd-16-1937-2023, 2023
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In this paper we develop a methodology to model the spatial distribution of solar radiation received by land over mountainous terrain. The approach is designed to be used in Earth system models, where coarse grid cells hinder the description of fine-scale land–atmosphere interactions. We adopt a clustering algorithm to partition the land domain into a set of homogeneous sub-grid
tiles, and for each tile we evaluate solar radiation received by land based on terrain properties.
Alban Planchat, Lester Kwiatkowski, Laurent Bopp, Olivier Torres, James R. Christian, Momme Butenschön, Tomas Lovato, Roland Séférian, Matthew A. Chamberlain, Olivier Aumont, Michio Watanabe, Akitomo Yamamoto, Andrew Yool, Tatiana Ilyina, Hiroyuki Tsujino, Kristen M. Krumhardt, Jörg Schwinger, Jerry Tjiputra, John P. Dunne, and Charles Stock
Biogeosciences, 20, 1195–1257, https://doi.org/10.5194/bg-20-1195-2023, https://doi.org/10.5194/bg-20-1195-2023, 2023
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Ocean alkalinity is critical to the uptake of atmospheric carbon and acidification in surface waters. We review the representation of alkalinity and the associated calcium carbonate cycle in Earth system models. While many parameterizations remain present in the latest generation of models, there is a general improvement in the simulated alkalinity distribution. This improvement is related to an increase in the export of biotic calcium carbonate, which closer resembles observations.
Zun Yin, Kirsten L. Findell, Paul Dirmeyer, Elena Shevliakova, Sergey Malyshev, Khaled Ghannam, Nina Raoult, and Zhihong Tan
Hydrol. Earth Syst. Sci., 27, 861–872, https://doi.org/10.5194/hess-27-861-2023, https://doi.org/10.5194/hess-27-861-2023, 2023
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Land–atmosphere (L–A) interactions typically focus on daytime processes connecting the land state with the overlying atmospheric boundary layer. However, much prior L–A work used monthly or daily means due to the lack of daytime-only data products. Here we show that monthly smoothing can significantly obscure the L–A coupling signal, and including nighttime information can mute or mask the daytime processes of interest. We propose diagnosing L–A coupling within models or archiving subdaily data.
Sian Kou-Giesbrecht, Sergey Malyshev, Isabel Martínez Cano, Stephen W. Pacala, Elena Shevliakova, Thomas A. Bytnerowicz, and Duncan N. L. Menge
Biogeosciences, 18, 4143–4183, https://doi.org/10.5194/bg-18-4143-2021, https://doi.org/10.5194/bg-18-4143-2021, 2021
Short summary
Short summary
Representing biological nitrogen fixation (BNF) is an important challenge for land models. We present a novel representation of BNF and updated nitrogen cycling in a land model. It includes a representation of asymbiotic BNF by soil microbes and the competitive dynamics between nitrogen-fixing and non-fixing plants. It improves estimations of major carbon and nitrogen pools and fluxes and their temporal dynamics in comparison to previous representations of BNF in land models.
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Short summary
Modeling global freshwater solid and nutrient loads, in both magnitude and form, is imperative for understanding emerging eutrophication problems. Such efforts, however, have been challenged by the difficulty of balancing details of freshwater biogeochemical processes with limited knowledge, input, and validation datasets. Here we develop a global freshwater model that resolves intertwined algae, solid, and nutrient dynamics and provide performance assessment against measurement-based estimates.
Modeling global freshwater solid and nutrient loads, in both magnitude and form, is imperative...
