Articles | Volume 8, issue 11
https://doi.org/10.5194/gmd-8-3695-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/gmd-8-3695-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Development and technical paper
| 
17 Nov 2015
Development and technical paper |
| 17 Nov 2015
A simple two-dimensional parameterisation for Flux Footprint Prediction (FFP)
Department of Geography, Swansea University, Swansea, UK
P. Calanca
Agroscope, Institute for Sustainability Sciences, Zurich, Switzerland
M. W. Rotach
Institute of Atmospheric and Cryospheric Sciences, Innsbruck University, Innsbruck, Austria
H. P. Schmid
KIT, Institute of Meteorology and Climate Research, Garmisch-Partenkirchen, Germany
Related authors
Ross Petersen, Thomas Holst, Meelis Mölder, Natascha Kljun, and Janne Rinne
Atmos. Chem. Phys., 23, 7839–7858, https://doi.org/10.5194/acp-23-7839-2023, https://doi.org/10.5194/acp-23-7839-2023, 2023
Short summary
Short summary
We investigate variability in the vertical distribution of volatile organic compounds (VOCs) in boreal forest, determined through multiyear measurements at several heights in a boreal forest in Sweden. VOC source/sink seasonality in canopy was explored using these vertical profiles and with measurements from a collection of sonic anemometers on the station flux tower. Our results show seasonality in the source/sink distribution for several VOCs, such as monoterpenes and water-soluble compounds.
Janne Rinne, Patryk Łakomiec, Patrik Vestin, Joel D. White, Per Weslien, Julia Kelly, Natascha Kljun, Lena Ström, and Leif Klemedtsson
Biogeosciences, 19, 4331–4349, https://doi.org/10.5194/bg-19-4331-2022, https://doi.org/10.5194/bg-19-4331-2022, 2022
Short summary
Short summary
The study uses the stable isotope 13C of carbon in methane to investigate the origins of spatial and temporal variation in methane emitted by a temperate wetland ecosystem. The results indicate that methane production is more important for spatial variation than methane consumption by micro-organisms. Temporal variation on a seasonal timescale is most likely affected by more than one driver simultaneously.
László Haszpra, Zoltán Barcza, Zita Ferenczi, Roland Hollós, Anikó Kern, and Natascha Kljun
Atmos. Meas. Tech., 15, 5019–5031, https://doi.org/10.5194/amt-15-5019-2022, https://doi.org/10.5194/amt-15-5019-2022, 2022
Short summary
Short summary
A novel approach is used for the determination of greenhouse gas (GHG) emissions of small rural settlements, which may significantly differ from those of urban regions and have hardly been studied yet. Among other results, it turned out that wintertime nitrous oxide emission is significantly underestimated in the official emission inventories. Given the large number of such settlements, the underestimation may also distort the national total emission values reported to international databases.
Patryk Łakomiec, Jutta Holst, Thomas Friborg, Patrick Crill, Niklas Rakos, Natascha Kljun, Per-Ola Olsson, Lars Eklundh, Andreas Persson, and Janne Rinne
Biogeosciences, 18, 5811–5830, https://doi.org/10.5194/bg-18-5811-2021, https://doi.org/10.5194/bg-18-5811-2021, 2021
Short summary
Short summary
Methane emission from the subarctic mire with heterogeneous permafrost status was measured for the years 2014–2016. Lower methane emission was measured from the palsa mire sector while the thawing wet sector emitted more. Both sectors have a similar annual pattern with a gentle rise during spring and a decrease during autumn. The highest emission was observed in the late summer. Winter emissions were positive during the measurement period and have a significant impact on the annual budgets.
Paul C. Stoy, Adam A. Cook, John E. Dore, Natascha Kljun, William Kleindl, E. N. Jack Brookshire, and Tobias Gerken
Biogeosciences, 18, 961–975, https://doi.org/10.5194/bg-18-961-2021, https://doi.org/10.5194/bg-18-961-2021, 2021
Short summary
Short summary
The reintroduction of American bison creates multiple environmental benefits. Ruminants like bison also emit methane – a potent greenhouse gas – to the atmosphere, which has not been measured to date in a field setting. We measured methane efflux from an American bison herd during winter using eddy covariance. Automated cameras were used to approximate their location to calculate per-animal flux. From the measurements, bison do not emit more methane than the cattle they often replace.
Jason Beringer, Ian McHugh, Lindsay B. Hutley, Peter Isaac, and Natascha Kljun
Biogeosciences, 14, 1457–1460, https://doi.org/10.5194/bg-14-1457-2017, https://doi.org/10.5194/bg-14-1457-2017, 2017
Short summary
Short summary
Standardised, quality-controlled and robust data from flux networks underpin the understanding of ecosystem processes and tools to manage our natural resources. The Dynamic INtegrated Gap-filling and partitioning for OzFlux (DINGO) system enables gap-filling and partitioning of fluxes and subsequently provides diagnostics and results. Quality data from robust systems like DINGO ensure the utility and uptake of flux data and facilitates synergies between flux, remote sensing and modelling.
Eva van Gorsel, Sebastian Wolf, James Cleverly, Peter Isaac, Vanessa Haverd, Cäcilia Ewenz, Stefan Arndt, Jason Beringer, Víctor Resco de Dios, Bradley J. Evans, Anne Griebel, Lindsay B. Hutley, Trevor Keenan, Natascha Kljun, Craig Macfarlane, Wayne S. Meyer, Ian McHugh, Elise Pendall, Suzanne M. Prober, and Richard Silberstein
Biogeosciences, 13, 5947–5964, https://doi.org/10.5194/bg-13-5947-2016, https://doi.org/10.5194/bg-13-5947-2016, 2016
Short summary
Short summary
Temperature extremes are expected to become more prevalent in the future and understanding ecosystem response is crucial. We synthesised measurements and model results to investigate the effect of a summer heat wave on carbon and water exchange across three biogeographic regions in southern Australia. Forests proved relatively resilient to short-term heat extremes but the response of woodlands indicates that the carbon sinks of large areas of Australia may not be sustainable in a future climate.
Raphael Portmann, Timo Schmid, Leonie Villiger, David N. Bresch, and Pierluigi Calanca
EGUsphere, https://doi.org/10.5194/egusphere-2023-2598, https://doi.org/10.5194/egusphere-2023-2598, 2023
Short summary
Short summary
The study presents a model to determine the occurrence of hail damage to field crops (wheat, maize, barley, rapeseed) and grapevines after a hailstorm. Using radar, agricultural land use data, and damage reports, it finds that the model performs best in the main production areas and at 8 km resolution for field crops and 1 km for grapevines. It also highlights the trade-offs in selecting suitable hail size thresholds for modeling, which eventually depends on user needs and cost considerations.
Matthias Göbel, Stefano Serafin, and Mathias W. Rotach
Weather Clim. Dynam., 4, 725–745, https://doi.org/10.5194/wcd-4-725-2023, https://doi.org/10.5194/wcd-4-725-2023, 2023
Short summary
Short summary
On summer days over mountains, upslope winds transport moist air towards mountain tops and beyond, making local rain showers more likely. We use idealized simulations to investigate how mountain steepness affects this mechanism. We find that steeper mountains lead to a delayed onset and lower intensity of the storms, because less moisture accumulates over the ridges and the thermal updraft zone at the top is narrower and thus more prone to the intrusion of dry air from the environment.
Ross Petersen, Thomas Holst, Meelis Mölder, Natascha Kljun, and Janne Rinne
Atmos. Chem. Phys., 23, 7839–7858, https://doi.org/10.5194/acp-23-7839-2023, https://doi.org/10.5194/acp-23-7839-2023, 2023
Short summary
Short summary
We investigate variability in the vertical distribution of volatile organic compounds (VOCs) in boreal forest, determined through multiyear measurements at several heights in a boreal forest in Sweden. VOC source/sink seasonality in canopy was explored using these vertical profiles and with measurements from a collection of sonic anemometers on the station flux tower. Our results show seasonality in the source/sink distribution for several VOCs, such as monoterpenes and water-soluble compounds.
Hetal P. Dabhi, Mathias W. Rotach, and Michael Oberguggenberger
Hydrol. Earth Syst. Sci., 27, 2123–2147, https://doi.org/10.5194/hess-27-2123-2023, https://doi.org/10.5194/hess-27-2123-2023, 2023
Short summary
Short summary
Spatiotemporally consistent high-resolution precipitation data on climate are needed for climate change impact assessments, but obtaining these data is challenging for areas with complex topography. We present a model that generates synthetic gridded daily precipitation data at a 1 km spatial resolution using observed meteorological station data as input, thereby providing data where historical observations are unavailable. We evaluate this model for a mountainous region in the European Alps.
Janne Rinne, Patryk Łakomiec, Patrik Vestin, Joel D. White, Per Weslien, Julia Kelly, Natascha Kljun, Lena Ström, and Leif Klemedtsson
Biogeosciences, 19, 4331–4349, https://doi.org/10.5194/bg-19-4331-2022, https://doi.org/10.5194/bg-19-4331-2022, 2022
Short summary
Short summary
The study uses the stable isotope 13C of carbon in methane to investigate the origins of spatial and temporal variation in methane emitted by a temperate wetland ecosystem. The results indicate that methane production is more important for spatial variation than methane consumption by micro-organisms. Temporal variation on a seasonal timescale is most likely affected by more than one driver simultaneously.
László Haszpra, Zoltán Barcza, Zita Ferenczi, Roland Hollós, Anikó Kern, and Natascha Kljun
Atmos. Meas. Tech., 15, 5019–5031, https://doi.org/10.5194/amt-15-5019-2022, https://doi.org/10.5194/amt-15-5019-2022, 2022
Short summary
Short summary
A novel approach is used for the determination of greenhouse gas (GHG) emissions of small rural settlements, which may significantly differ from those of urban regions and have hardly been studied yet. Among other results, it turned out that wintertime nitrous oxide emission is significantly underestimated in the official emission inventories. Given the large number of such settlements, the underestimation may also distort the national total emission values reported to international databases.
Cornelius Immanuel Weiß, Alexander Gohm, Mathias Walter Rotach, and Thomas Torora Minda
Weather Clim. Dynam., 3, 1003–1019, https://doi.org/10.5194/wcd-3-1003-2022, https://doi.org/10.5194/wcd-3-1003-2022, 2022
Short summary
Short summary
Two gap flow events in the Great Rift Valley in Ethiopia were investigated based on observations, ERA5 reanalysis data, and simulations with the numerical weather prediction model WRF. The main focus was on strong winds in the area around Lake Abaya since the winds may generate waves on the lake which help to sustain the lake's ecology. That is important in terms of food supply for the local population. The gap winds exhibit a diurnal cycle and a seasonal dependence.
Helen Claire Ward, Mathias Walter Rotach, Alexander Gohm, Martin Graus, Thomas Karl, Maren Haid, Lukas Umek, and Thomas Muschinski
Atmos. Chem. Phys., 22, 6559–6593, https://doi.org/10.5194/acp-22-6559-2022, https://doi.org/10.5194/acp-22-6559-2022, 2022
Short summary
Short summary
This study examines how cities and their surroundings influence turbulent exchange processes responsible for weather and climate. Analysis of a 4-year observational dataset for the Alpine city of Innsbruck reveals several similarities with other (flat) city centre sites. However, the mountain setting leads to characteristic daily and seasonal flow patterns (valley winds) and downslope windstorms that have a marked effect on temperature, wind speed, turbulence and pollutant concentration.
Lorenz Hänchen, Cornelia Klein, Fabien Maussion, Wolfgang Gurgiser, Pierluigi Calanca, and Georg Wohlfahrt
Earth Syst. Dynam., 13, 595–611, https://doi.org/10.5194/esd-13-595-2022, https://doi.org/10.5194/esd-13-595-2022, 2022
Short summary
Short summary
To date, farmers' perceptions of hydrological changes do not match analysis of meteorological data. In contrast to rainfall data, we find greening of vegetation, indicating increased water availability in the past decades. The start of the season is highly variable, making farmers' perceptions comprehensible. We show that the El Niño–Southern Oscillation has complex effects on vegetation seasonality but does not drive the greening we observe. Improved onset forecasts could help local farmers.
Matthias Göbel, Stefano Serafin, and Mathias W. Rotach
Geosci. Model Dev., 15, 669–681, https://doi.org/10.5194/gmd-15-669-2022, https://doi.org/10.5194/gmd-15-669-2022, 2022
Short summary
Short summary
We present WRFlux, an open-source software that allows numerically consistent, time-averaged budget evaluation of prognostic variables for the numerical weather prediction model WRF as well as the transformation of the budget equations from the terrain-following grid of the model to the Cartesian coordinate system. We demonstrate the performance and a possible application of WRFlux and illustrate the detrimental effects of approximations that are inconsistent with the model numerics.
Patryk Łakomiec, Jutta Holst, Thomas Friborg, Patrick Crill, Niklas Rakos, Natascha Kljun, Per-Ola Olsson, Lars Eklundh, Andreas Persson, and Janne Rinne
Biogeosciences, 18, 5811–5830, https://doi.org/10.5194/bg-18-5811-2021, https://doi.org/10.5194/bg-18-5811-2021, 2021
Short summary
Short summary
Methane emission from the subarctic mire with heterogeneous permafrost status was measured for the years 2014–2016. Lower methane emission was measured from the palsa mire sector while the thawing wet sector emitted more. Both sectors have a similar annual pattern with a gentle rise during spring and a decrease during autumn. The highest emission was observed in the late summer. Winter emissions were positive during the measurement period and have a significant impact on the annual budgets.
Johannes Horak, Marlis Hofer, Ethan Gutmann, Alexander Gohm, and Mathias W. Rotach
Geosci. Model Dev., 14, 1657–1680, https://doi.org/10.5194/gmd-14-1657-2021, https://doi.org/10.5194/gmd-14-1657-2021, 2021
Short summary
Short summary
This process-based evaluation of the atmospheric model ICAR is conducted to derive recommendations to increase the likelihood of its results being correct for the right reasons. We conclude that a different diagnosis of the atmospheric background state is necessary, as well as a model top at an elevation of at least 10 km. Alternative boundary conditions at the top were not found to be effective in reducing this model top elevation. The results have wide implications for future ICAR studies.
Paul C. Stoy, Adam A. Cook, John E. Dore, Natascha Kljun, William Kleindl, E. N. Jack Brookshire, and Tobias Gerken
Biogeosciences, 18, 961–975, https://doi.org/10.5194/bg-18-961-2021, https://doi.org/10.5194/bg-18-961-2021, 2021
Short summary
Short summary
The reintroduction of American bison creates multiple environmental benefits. Ruminants like bison also emit methane – a potent greenhouse gas – to the atmosphere, which has not been measured to date in a field setting. We measured methane efflux from an American bison herd during winter using eddy covariance. Automated cameras were used to approximate their location to calculate per-animal flux. From the measurements, bison do not emit more methane than the cattle they often replace.
Bettina Richter, Alec van Herwijnen, Mathias W. Rotach, and Jürg Schweizer
Nat. Hazards Earth Syst. Sci., 20, 2873–2888, https://doi.org/10.5194/nhess-20-2873-2020, https://doi.org/10.5194/nhess-20-2873-2020, 2020
Short summary
Short summary
We investigated the sensitivity of modeled snow instability to uncertainties in meteorological input, typically found in complex terrain. The formation of the weak layer was very robust due to the long dry period, indicated by a widespread avalanche problem. Once a weak layer has formed, precipitation mostly determined slab and weak layer properties and hence snow instability. When spatially assessing snow instability for avalanche forecasting, accurate precipitation patterns have to be known.
Bettina Richter, Jürg Schweizer, Mathias W. Rotach, and Alec van Herwijnen
The Cryosphere, 13, 3353–3366, https://doi.org/10.5194/tc-13-3353-2019, https://doi.org/10.5194/tc-13-3353-2019, 2019
Short summary
Short summary
Information on snow stability is important for avalanche forecasting. To improve the stability estimation in the snow cover model SNOWPACK, we suggested an improved parameterization for the critical crack length. We compared 3 years of field data to SNOWPACK simulations. The match between observed and modeled critical crack lengths greatly improved, and critical weak layers appear more prominently in the modeled vertical profile of critical crack length.
Olli Peltola, Timo Vesala, Yao Gao, Olle Räty, Pavel Alekseychik, Mika Aurela, Bogdan Chojnicki, Ankur R. Desai, Albertus J. Dolman, Eugenie S. Euskirchen, Thomas Friborg, Mathias Göckede, Manuel Helbig, Elyn Humphreys, Robert B. Jackson, Georg Jocher, Fortunat Joos, Janina Klatt, Sara H. Knox, Natalia Kowalska, Lars Kutzbach, Sebastian Lienert, Annalea Lohila, Ivan Mammarella, Daniel F. Nadeau, Mats B. Nilsson, Walter C. Oechel, Matthias Peichl, Thomas Pypker, William Quinton, Janne Rinne, Torsten Sachs, Mateusz Samson, Hans Peter Schmid, Oliver Sonnentag, Christian Wille, Donatella Zona, and Tuula Aalto
Earth Syst. Sci. Data, 11, 1263–1289, https://doi.org/10.5194/essd-11-1263-2019, https://doi.org/10.5194/essd-11-1263-2019, 2019
Short summary
Short summary
Here we develop a monthly gridded dataset of northern (> 45 N) wetland methane (CH4) emissions. The data product is derived using a random forest machine-learning technique and eddy covariance CH4 fluxes from 25 wetland sites. Annual CH4 emissions from these wetlands calculated from the derived data product are comparable to prior studies focusing on these areas. This product is an independent estimate of northern wetland CH4 emissions and hence could be used, e.g. for process model evaluation.
Christian Mallaun, Andreas Giez, Georg J. Mayr, and Mathias W. Rotach
Atmos. Chem. Phys., 19, 9769–9786, https://doi.org/10.5194/acp-19-9769-2019, https://doi.org/10.5194/acp-19-9769-2019, 2019
Short summary
Short summary
This study presents airborne measurements in shallow convection over land to investigate the dynamic properties of clouds focusing on possible narrow downdraughts in the surrounding of the clouds. A characteristic narrow downdraught region (
subsiding shell) is found directly outside the cloud borders for the mean vertical wind distribution. The
subsiding shellresults from the distribution of the highly variable updraughts and downdraughts in the near vicinity of the cloud.
Johannes Horak, Marlis Hofer, Fabien Maussion, Ethan Gutmann, Alexander Gohm, and Mathias W. Rotach
Hydrol. Earth Syst. Sci., 23, 2715–2734, https://doi.org/10.5194/hess-23-2715-2019, https://doi.org/10.5194/hess-23-2715-2019, 2019
Short summary
Short summary
This study presents an in-depth evaluation of the Intermediate Complexity Atmospheric Research (ICAR) model for high-resolution precipitation fields in complex topography. ICAR is evaluated with data from weather stations located in the Southern Alps of New Zealand. While ICAR underestimates rainfall amounts, it clearly improves over a coarser global model and shows potential to generate precipitation fields for long-term impact studies focused on the local impact of a changing global climate.
Chunjing Qiu, Dan Zhu, Philippe Ciais, Bertrand Guenet, Gerhard Krinner, Shushi Peng, Mika Aurela, Christian Bernhofer, Christian Brümmer, Syndonia Bret-Harte, Housen Chu, Jiquan Chen, Ankur R. Desai, Jiří Dušek, Eugénie S. Euskirchen, Krzysztof Fortuniak, Lawrence B. Flanagan, Thomas Friborg, Mateusz Grygoruk, Sébastien Gogo, Thomas Grünwald, Birger U. Hansen, David Holl, Elyn Humphreys, Miriam Hurkuck, Gerard Kiely, Janina Klatt, Lars Kutzbach, Chloé Largeron, Fatima Laggoun-Défarge, Magnus Lund, Peter M. Lafleur, Xuefei Li, Ivan Mammarella, Lutz Merbold, Mats B. Nilsson, Janusz Olejnik, Mikaell Ottosson-Löfvenius, Walter Oechel, Frans-Jan W. Parmentier, Matthias Peichl, Norbert Pirk, Olli Peltola, Włodzimierz Pawlak, Daniel Rasse, Janne Rinne, Gaius Shaver, Hans Peter Schmid, Matteo Sottocornola, Rainer Steinbrecher, Torsten Sachs, Marek Urbaniak, Donatella Zona, and Klaudia Ziemblinska
Geosci. Model Dev., 11, 497–519, https://doi.org/10.5194/gmd-11-497-2018, https://doi.org/10.5194/gmd-11-497-2018, 2018
Short summary
Short summary
Northern peatlands store large amount of soil carbon and are vulnerable to climate change. We implemented peatland hydrological and carbon accumulation processes into the ORCHIDEE land surface model. The model was evaluated against EC measurements from 30 northern peatland sites. The model generally well reproduced the spatial gradient and temporal variations in GPP and NEE at these sites. Water table depth was not well predicted but had only small influence on simulated NEE.
Jason Beringer, Ian McHugh, Lindsay B. Hutley, Peter Isaac, and Natascha Kljun
Biogeosciences, 14, 1457–1460, https://doi.org/10.5194/bg-14-1457-2017, https://doi.org/10.5194/bg-14-1457-2017, 2017
Short summary
Short summary
Standardised, quality-controlled and robust data from flux networks underpin the understanding of ecosystem processes and tools to manage our natural resources. The Dynamic INtegrated Gap-filling and partitioning for OzFlux (DINGO) system enables gap-filling and partitioning of fluxes and subsequently provides diagnostics and results. Quality data from robust systems like DINGO ensure the utility and uptake of flux data and facilitates synergies between flux, remote sensing and modelling.
Eva van Gorsel, Sebastian Wolf, James Cleverly, Peter Isaac, Vanessa Haverd, Cäcilia Ewenz, Stefan Arndt, Jason Beringer, Víctor Resco de Dios, Bradley J. Evans, Anne Griebel, Lindsay B. Hutley, Trevor Keenan, Natascha Kljun, Craig Macfarlane, Wayne S. Meyer, Ian McHugh, Elise Pendall, Suzanne M. Prober, and Richard Silberstein
Biogeosciences, 13, 5947–5964, https://doi.org/10.5194/bg-13-5947-2016, https://doi.org/10.5194/bg-13-5947-2016, 2016
Short summary
Short summary
Temperature extremes are expected to become more prevalent in the future and understanding ecosystem response is crucial. We synthesised measurements and model results to investigate the effect of a summer heat wave on carbon and water exchange across three biogeographic regions in southern Australia. Forests proved relatively resilient to short-term heat extremes but the response of woodlands indicates that the carbon sinks of large areas of Australia may not be sustainable in a future climate.
Daniel Leukauf, Alexander Gohm, and Mathias W. Rotach
Atmos. Chem. Phys., 16, 13049–13066, https://doi.org/10.5194/acp-16-13049-2016, https://doi.org/10.5194/acp-16-13049-2016, 2016
Short summary
Short summary
Since populated valleys suffer often from poor air quality, it is of interest to better understand the various mechanisms relevant to remove pollutants from the valley atmosphere. One mechanism is the transport by along-slope flows, which are generated during fair-weather days. In this study we quantify the amount of tracer that is removed from a valley atmosphere and the amount that is re-circulated within the valleys. For this study we are using the numerical weather model WRF.
Robert F. Grant, Albrecht Neftel, and Pierluigi Calanca
Biogeosciences, 13, 3549–3571, https://doi.org/10.5194/bg-13-3549-2016, https://doi.org/10.5194/bg-13-3549-2016, 2016
Short summary
Short summary
The magnitude of N2O emissions from managed grasslands depends on weather and on harvesting and fertilizer practices. Modelling provides a means to predict these emissions under diverse weather and management types. In this modelling study, we show that N2O emissions depend on how weather affects temperatures and water contents of surface litter and near-surface soil. N2O emissions modelled from the grassland were increased by suboptimal harvesting practices, fertilizer timing and soil properties.
G. Massaro, I. Stiperski, B. Pospichal, and M. W. Rotach
Atmos. Meas. Tech., 8, 3355–3367, https://doi.org/10.5194/amt-8-3355-2015, https://doi.org/10.5194/amt-8-3355-2015, 2015
J. S. Wagner, A. Gohm, and M. W. Rotach
Atmos. Chem. Phys., 15, 6589–6603, https://doi.org/10.5194/acp-15-6589-2015, https://doi.org/10.5194/acp-15-6589-2015, 2015
J. Hommeltenberg, H. P. Schmid, M. Drösler, and P. Werle
Biogeosciences, 11, 3477–3493, https://doi.org/10.5194/bg-11-3477-2014, https://doi.org/10.5194/bg-11-3477-2014, 2014
K. Zink, A. Pauling, M. W. Rotach, H. Vogel, P. Kaufmann, and B. Clot
Geosci. Model Dev., 6, 1961–1975, https://doi.org/10.5194/gmd-6-1961-2013, https://doi.org/10.5194/gmd-6-1961-2013, 2013
S. Metzger, W. Junkermann, M. Mauder, K. Butterbach-Bahl, B. Trancón y Widemann, F. Neidl, K. Schäfer, S. Wieneke, X. H. Zheng, H. P. Schmid, and T. Foken
Biogeosciences, 10, 2193–2217, https://doi.org/10.5194/bg-10-2193-2013, https://doi.org/10.5194/bg-10-2193-2013, 2013
Related subject area
Biogeosciences
Simple process-led algorithms for simulating habitats (SPLASH v.2.0): robust calculations of water and energy fluxes
A global behavioural model of human fire use and management: WHAM! v1.0
Terrestrial Ecosystem Model in R (TEMIR) version 1.0: simulating ecophysiological responses of vegetation to atmospheric chemical and meteorological changes
biospheremetrics v1.0.2: an R package to calculate two complementary terrestrial biosphere integrity indicators – human colonization of the biosphere (BioCol) and risk of ecosystem destabilization (EcoRisk)
Modeling boreal forest soil dynamics with the microbially explicit soil model MIMICS+ (v1.0)
Optimal enzyme allocation leads to the constrained enzyme hypothesis: the Soil Enzyme Steady Allocation Model (SESAM; v3.1)
Implementing a dynamic representation of fire and harvest including subgrid-scale heterogeneity in the tile-based land surface model CLASSIC v1.45
Inferring the tree regeneration niche from inventory data using a dynamic forest model
Optimising CH4 simulations from the LPJ-GUESS model v4.1 using an adaptive Markov chain Monte Carlo algorithm
The XSO framework (v0.1) and Phydra library (v0.1) for a flexible, reproducible, and integrated plankton community modeling environment in Python
AgriCarbon-EO v1.0.1: large-scale and high-resolution simulation of carbon fluxes by assimilation of Sentinel-2 and Landsat-8 reflectances using a Bayesian approach
SAMM version 1.0: a numerical model for microbial- mediated soil aggregate formation
Using Deep Learning to integrate paleoclimate and global biogeochemistry over Phanerozoic time
A model of the within-population variability of budburst in forest trees
Computationally efficient parameter estimation for high-dimensional ocean biogeochemical models
The community-centered freshwater biogeochemistry model unified RIVE v1.0: a unified version for water column
EAT v0.9.6: a 1D testbed for physical-biogeochemical data assimilation in natural waters
Observation-based sowing dates and cultivars significantly affect yield and irrigation for some crops in the Community Land Model (CLM5)
The statistical emulators of GGCMI phase 2: responses of year-to-year variation of crop yield to CO2, temperature, water, and nitrogen perturbations
A novel Eulerian model based on central moments to simulate age and reactivity continua interacting with mixing processes
Dynamic ecosystem assembly and escaping the “fire-trap” in the tropics: Insights from FATES_15.0.0
AdaScape 1.0: a coupled modelling tool to investigate the links between tectonics, climate, and biodiversity
An along-track Biogeochemical Argo modelling framework: a case study of model improvements for the Nordic seas
Peatland-VU-NUCOM (PVN 1.0): using dynamic plant functional types to model peatland vegetation, CH4, and CO2 emissions
Quantification of hydraulic trait control on plant hydrodynamics and risk of hydraulic failure within a demographic structured vegetation model in a tropical forest (FATES–HYDRO V1.0)
SedTrace 1.0: a Julia-based framework for generating and running reactive-transport models of marine sediment diagenesis specializing in trace elements and isotopes
A high-resolution marine mercury model MITgcm-ECCO2-Hg with online biogeochemistry
Improving nitrogen cycling in a land surface model (CLM5) to quantify soil N2O, NO, and NH3 emissions from enhanced rock weathering with croplands
Ocean biogeochemistry in the coupled ocean–sea ice–biogeochemistry model FESOM2.1–REcoM3
In-silico calculation of soil pH by SCEPTER v1.0
Forcing the Global Fire Emissions Database burned-area dataset into the Community Land Model version 5.0: impacts on carbon and water fluxes at high latitudes
Modeling boreal forest’s mineral soil and peat C stock dynamics with Yasso07 model coupled with updated moisture modifier
Modeling of non-structural carbohydrate dynamics by the spatially explicit individual-based dynamic global vegetation model SEIB-DGVM (SEIB-DGVM-NSC version 1.0)
MEDFATE 2.9.3: a trait-enabled model to simulate Mediterranean forest function and dynamics at regional scales
Modelling the role of livestock grazing in C and N cycling in grasslands with LPJmL5.0-grazing
Implementation of trait-based ozone plant sensitivity in the Yale Interactive terrestrial Biosphere model v1.0 to assess global vegetation damage
The Permafrost and Organic LayEr module for Forest Models (POLE-FM) 1.0
CompLaB v1.0: a scalable pore-scale model for flow, biogeochemistry, microbial metabolism, and biofilm dynamics
Validation of a new spatially explicit process-based model (HETEROFOR) to simulate structurally and compositionally complex forest stands in eastern North America
Global agricultural ammonia emissions simulated with the ORCHIDEE land surface model
ForamEcoGEnIE 2.0: incorporating symbiosis and spine traits into a trait-based global planktic foraminiferal model
FABM-NflexPD 2.0: testing an instantaneous acclimation approach for modeling the implications of phytoplankton eco-physiology for the carbon and nutrient cycles
Evaluating the vegetation–atmosphere coupling strength of ORCHIDEE land surface model (v7266)
Non-Redfieldian carbon model for the Baltic Sea (ERGOM version 1.2) – implementation and budget estimates
Implementation of a new crop phenology and irrigation scheme in the ISBA land surface model using SURFEX_v8.1
Simulating long-term responses of soil organic matter turnover to substrate stoichiometry by abstracting fast and small-scale microbial processes: the Soil Enzyme Steady Allocation Model (SESAM; v3.0)
Modeling demographic-driven vegetation dynamics and ecosystem biogeochemical cycling in NASA GISS's Earth system model (ModelE-BiomeE v.1.0)
Forest fluxes and mortality response to drought: model description (ORCHIDEE-CAN-NHA r7236) and evaluation at the Caxiuanã drought experiment
Matrix representation of lateral soil movements: scaling and calibrating CE-DYNAM (v2) at a continental level
CANOPS-GRB v1.0: a new Earth system model for simulating the evolution of ocean–atmosphere chemistry over geologic timescales
David Sandoval, Iain Colin Prentice, and Rodolfo L. B. Nóbrega
Geosci. Model Dev., 17, 4229–4309, https://doi.org/10.5194/gmd-17-4229-2024, https://doi.org/10.5194/gmd-17-4229-2024, 2024
Short summary
Short summary
Numerous estimates of water and energy balances depend on empirical equations requiring site-specific calibration, posing risks of "the right answers for the wrong reasons". We introduce novel first-principles formulations to calculate key quantities without requiring local calibration, matching predictions from complex land surface models.
Oliver Perkins, Matthew Kasoar, Apostolos Voulgarakis, Cathy Smith, Jay Mistry, and James D. A. Millington
Geosci. Model Dev., 17, 3993–4016, https://doi.org/10.5194/gmd-17-3993-2024, https://doi.org/10.5194/gmd-17-3993-2024, 2024
Short summary
Short summary
Wildfire is often presented in the media as a danger to human life. Yet globally, millions of people’s livelihoods depend on using fire as a tool. So, patterns of fire emerge from interactions between humans, land use, and climate. This complexity means scientists cannot yet reliably say how fire will be impacted by climate change. So, we developed a new model that represents globally how people use and manage fire. The model reveals the extent and diversity of how humans live with and use fire.
Amos P. K. Tai, David H. Y. Yung, and Timothy Lam
Geosci. Model Dev., 17, 3733–3764, https://doi.org/10.5194/gmd-17-3733-2024, https://doi.org/10.5194/gmd-17-3733-2024, 2024
Short summary
Short summary
We have developed the Terrestrial Ecosystem Model in R (TEMIR), which simulates plant carbon and pollutant uptake and predicts their response to varying atmospheric conditions. This model is designed to couple with an atmospheric chemistry model so that questions related to plant–atmosphere interactions, such as the effects of climate change, rising CO2, and ozone pollution on forest carbon uptake, can be addressed. The model has been well validated with both ground and satellite observations.
Fabian Stenzel, Johanna Braun, Jannes Breier, Karlheinz Erb, Dieter Gerten, Jens Heinke, Sarah Matej, Sebastian Ostberg, Sibyll Schaphoff, and Wolfgang Lucht
Geosci. Model Dev., 17, 3235–3258, https://doi.org/10.5194/gmd-17-3235-2024, https://doi.org/10.5194/gmd-17-3235-2024, 2024
Short summary
Short summary
We provide an R package to compute two biosphere integrity metrics that can be applied to simulations of vegetation growth from the dynamic global vegetation model LPJmL. The pressure metric BioCol indicates that we humans modify and extract > 20 % of the potential preindustrial natural biomass production. The ecosystems state metric EcoRisk shows a high risk of ecosystem destabilization in many regions as a result of climate change and land, water, and fertilizer use.
Elin Ristorp Aas, Heleen A. de Wit, and Terje K. Berntsen
Geosci. Model Dev., 17, 2929–2959, https://doi.org/10.5194/gmd-17-2929-2024, https://doi.org/10.5194/gmd-17-2929-2024, 2024
Short summary
Short summary
By including microbial processes in soil models, we learn how the soil system interacts with its environment and responds to climate change. We present a soil process model, MIMICS+, which is able to reproduce carbon stocks found in boreal forest soils better than a conventional land model. With the model we also find that when adding nitrogen, the relationship between soil microbes changes notably. Coupling the model to a vegetation model will allow for further study of these mechanisms.
Thomas Wutzler, Christian Reimers, Bernhard Ahrens, and Marion Schrumpf
Geosci. Model Dev., 17, 2705–2725, https://doi.org/10.5194/gmd-17-2705-2024, https://doi.org/10.5194/gmd-17-2705-2024, 2024
Short summary
Short summary
Soil microbes provide a strong link for elemental fluxes in the earth system. The SESAM model applies an optimality assumption to model those linkages and their adaptation. We found that a previous heuristic description was a special case of a newly developed more rigorous description. The finding of new behaviour at low microbial biomass led us to formulate the constrained enzyme hypothesis. We now can better describe how microbially mediated linkages of elemental fluxes adapt across decades.
Salvatore R. Curasi, Joe R. Melton, Elyn R. Humphreys, Txomin Hermosilla, and Michael A. Wulder
Geosci. Model Dev., 17, 2683–2704, https://doi.org/10.5194/gmd-17-2683-2024, https://doi.org/10.5194/gmd-17-2683-2024, 2024
Short summary
Short summary
Canadian forests are responding to fire, harvest, and climate change. Models need to quantify these processes and their carbon and energy cycling impacts. We develop a scheme that, based on satellite records, represents fire, harvest, and the sparsely vegetated areas that these processes generate. We evaluate model performance and demonstrate the impacts of disturbance on carbon and energy cycling. This work has implications for land surface modeling and assessing Canada’s terrestrial C cycle.
Yannek Käber, Florian Hartig, and Harald Bugmann
Geosci. Model Dev., 17, 2727–2753, https://doi.org/10.5194/gmd-17-2727-2024, https://doi.org/10.5194/gmd-17-2727-2024, 2024
Short summary
Short summary
Many forest models include detailed mechanisms of forest growth and mortality, but regeneration is often simplified. Testing and improving forest regeneration models is challenging. We address this issue by exploring how forest inventories from unmanaged European forests can be used to improve such models. We find that competition for light among trees is captured by the model, unknown model components can be informed by forest inventory data, and climatic effects are challenging to capture.
Jalisha T. Kallingal, Johan Lindström, Paul A. Miller, Janne Rinne, Maarit Raivonen, and Marko Scholze
Geosci. Model Dev., 17, 2299–2324, https://doi.org/10.5194/gmd-17-2299-2024, https://doi.org/10.5194/gmd-17-2299-2024, 2024
Short summary
Short summary
By unlocking the mysteries of CH4 emissions from wetlands, our work improved the accuracy of the LPJ-GUESS vegetation model using Bayesian statistics. Via assimilation of long-term real data from a wetland, we significantly enhanced CH4 emission predictions. This advancement helps us better understand wetland contributions to atmospheric CH4, which are crucial for addressing climate change. Our method offers a promising tool for refining global climate models and guiding conservation efforts
Benjamin Post, Esteban Acevedo-Trejos, Andrew D. Barton, and Agostino Merico
Geosci. Model Dev., 17, 1175–1195, https://doi.org/10.5194/gmd-17-1175-2024, https://doi.org/10.5194/gmd-17-1175-2024, 2024
Short summary
Short summary
Creating computational models of how phytoplankton grows in the ocean is a technical challenge. We developed a new tool set (Xarray-simlab-ODE) for building such models using the programming language Python. We demonstrate the tool set in a library of plankton models (Phydra). Our goal was to allow scientists to develop models quickly, while also allowing the model structures to be changed easily. This allows us to test many different structures of our models to find the most appropriate one.
Taeken Wijmer, Ahmad Al Bitar, Ludovic Arnaud, Remy Fieuzal, and Eric Ceschia
Geosci. Model Dev., 17, 997–1021, https://doi.org/10.5194/gmd-17-997-2024, https://doi.org/10.5194/gmd-17-997-2024, 2024
Short summary
Short summary
Quantification of carbon fluxes of crops is an essential building block for the construction of a monitoring, reporting, and verification approach. We developed an end-to-end platform (AgriCarbon-EO) that assimilates, through a Bayesian approach, high-resolution (10 m) optical remote sensing data into radiative transfer and crop modelling at regional scale (100 x 100 km). Large-scale estimates of carbon flux are validated against in situ flux towers and yield maps and analysed at regional scale.
Moritz Laub, Sergey Blagodatsky, Marijn Van de Broek, Samuel Schlichenmaier, Benjapon Kunlanit, Johan Six, Patma Vityakon, and Georg Cadisch
Geosci. Model Dev., 17, 931–956, https://doi.org/10.5194/gmd-17-931-2024, https://doi.org/10.5194/gmd-17-931-2024, 2024
Short summary
Short summary
To manage soil organic matter (SOM) sustainably, we need a better understanding of the role that soil microbes play in aggregate protection. Here, we propose the SAMM model, which connects soil aggregate formation to microbial growth. We tested it against data from a tropical long-term experiment and show that SAMM effectively represents the microbial growth, SOM, and aggregate dynamics and that it can be used to explore the importance of aggregate formation in SOM stabilization.
Dongyu Zheng, Andrew Merdith, Yves Goddéris, Yannick Donnadieu, Khushboo Gurung, and Benjamin J. W. Mills
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-230, https://doi.org/10.5194/gmd-2023-230, 2024
Revised manuscript accepted for GMD
Short summary
Short summary
This study uses a deep learning method to enhance the time resolution of paleoclimate simulations to 1 million years. This improved resolution allows a climate-biogeochemical model for more accurate predictions of climate shifts. The method may be critical in developing new fully-continuous methods that are able to translate over a moving continental surface in deep time with high-resolution at a reasonable computational expense.
Jianhong Lin, Daniel Berveiller, Christophe François, Heikki Hänninen, Alexandre Morfin, Gaëlle Vincent, Rui Zhang, Cyrille Rathgeber, and Nicolas Delpierre
Geosci. Model Dev., 17, 865–879, https://doi.org/10.5194/gmd-17-865-2024, https://doi.org/10.5194/gmd-17-865-2024, 2024
Short summary
Short summary
Currently, the high variability of budburst between individual trees is overlooked. The consequences of this neglect when projecting the dynamics and functioning of tree communities are unknown. Here we develop the first process-oriented model to describe the difference in budburst dates between individual trees in plant populations. Beyond budburst, the model framework provides a basis for studying the dynamics of phenological traits under climate change, from the individual to the community.
Skyler Kern, Mary E. McGuinn, Katherine M. Smith, Nadia Pinardi, Kyle E. Niemeyer, Nicole S. Lovenduski, and Peter E. Hamlington
Geosci. Model Dev., 17, 621–649, https://doi.org/10.5194/gmd-17-621-2024, https://doi.org/10.5194/gmd-17-621-2024, 2024
Short summary
Short summary
Computational models are used to simulate the behavior of marine ecosystems. The models often have unknown parameters that need to be calibrated to accurately represent observational data. Here, we propose a novel approach to simultaneously determine a large set of parameters for a one-dimensional model of a marine ecosystem in the surface ocean at two contrasting sites. By utilizing global and local optimization techniques, we estimate many parameters in a computationally efficient manner.
Shuaitao Wang, Vincent Thieu, Gilles Billen, Josette Garnier, Marie Silvestre, Audrey Marescaux, Xingcheng Yan, and Nicolas Flipo
Geosci. Model Dev., 17, 449–476, https://doi.org/10.5194/gmd-17-449-2024, https://doi.org/10.5194/gmd-17-449-2024, 2024
Short summary
Short summary
This paper presents unified RIVE v1.0, a unified version of the freshwater biogeochemistry model RIVE. It harmonizes different RIVE implementations, providing the referenced formalisms for microorganism activities to describe full biogeochemical cycles in the water column (e.g., carbon, nutrients, oxygen). Implemented as open-source projects in Python 3 (pyRIVE 1.0) and ANSI C (C-RIVE 0.32), unified RIVE v1.0 promotes and enhances collaboration among research teams and public services.
Jorn Bruggeman, Karsten Bolding, Lars Nerger, Anna Teruzzi, Simone Spada, Jozef Skákala, and Stefano Ciavatta
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-238, https://doi.org/10.5194/gmd-2023-238, 2023
Revised manuscript accepted for GMD
Short summary
Short summary
To understand and predict the ocean’s capacity for carbon sequestration, its ability to supply food, and its response to climate change, we need the best possible estimate of its physical and biogeochemical properties. This is obtained through “data assimilation”, which blends numerical models and observations. Here, we present EAT, a flexible and efficient testbed that allows any scientist to explore and further develop the state-of-the-art in data assimilation.
Sam S. Rabin, William J. Sacks, Danica L. Lombardozzi, Lili Xia, and Alan Robock
Geosci. Model Dev., 16, 7253–7273, https://doi.org/10.5194/gmd-16-7253-2023, https://doi.org/10.5194/gmd-16-7253-2023, 2023
Short summary
Short summary
Climate models can help us simulate how the agricultural system will be affected by and respond to environmental change, but to be trustworthy they must realistically reproduce historical patterns. When farmers plant their crops and what varieties they choose will be important aspects of future adaptation. Here, we improve the crop component of a global model to better simulate observed growing seasons and examine the impacts on simulated crop yields and irrigation demand.
Weihang Liu, Tao Ye, Christoph Müller, Jonas Jägermeyr, James A. Franke, Haynes Stephens, and Shuo Chen
Geosci. Model Dev., 16, 7203–7221, https://doi.org/10.5194/gmd-16-7203-2023, https://doi.org/10.5194/gmd-16-7203-2023, 2023
Short summary
Short summary
We develop a machine-learning-based crop model emulator with the inputs and outputs of multiple global gridded crop model ensemble simulations to capture the year-to-year variation of crop yield under future climate change. The emulator can reproduce the year-to-year variation of simulated yield given by the crop models under CO2, temperature, water, and nitrogen perturbations. Developing this emulator can provide a tool to project future climate change impact in a simple way.
Jurjen Rooze, Heewon Jung, and Hagen Radtke
Geosci. Model Dev., 16, 7107–7121, https://doi.org/10.5194/gmd-16-7107-2023, https://doi.org/10.5194/gmd-16-7107-2023, 2023
Short summary
Short summary
Chemical particles in nature have properties such as age or reactivity. Distributions can describe the properties of chemical concentrations. In nature, they are affected by mixing processes, such as chemical diffusion, burrowing animals, and bottom trawling. We derive equations for simulating the effect of mixing on central moments that describe the distributions. We then demonstrate applications in which these equations are used to model continua in disturbed natural environments.
Jacquelyn K. Shuman, Rosie A. Fisher, Charles D. Koven, Ryan G. Knox, Lara M. Kueppers, and Chonggang Xu
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-191, https://doi.org/10.5194/gmd-2023-191, 2023
Revised manuscript accepted for GMD
Short summary
Short summary
We adapt a fire-behavior and effects module for use in a size-structured vegetation demographic model to test how climate, fire regime and fire-tolerance plant traits interact to determine the distribution of tropical forests and grasslands. Our model captures the connection between fire disturbance and plant fire-tolerance strategies in determining plant distribution and provides a useful tool for understanding the vulnerability of these areas under changing conditions across the tropics.
Esteban Acevedo-Trejos, Jean Braun, Katherine Kravitz, N. Alexia Raharinirina, and Benoît Bovy
Geosci. Model Dev., 16, 6921–6941, https://doi.org/10.5194/gmd-16-6921-2023, https://doi.org/10.5194/gmd-16-6921-2023, 2023
Short summary
Short summary
The interplay of tectonics and climate influences the evolution of life and the patterns of biodiversity we observe on earth's surface. Here we present an adaptive speciation component coupled with a landscape evolution model that captures the essential earth-surface, ecological, and evolutionary processes that lead to the diversification of taxa. We can illustrate with our tool how life and landforms co-evolve to produce distinct biodiversity patterns on geological timescales.
Veli Çağlar Yumruktepe, Erik Askov Mousing, Jerry Tjiputra, and Annette Samuelsen
Geosci. Model Dev., 16, 6875–6897, https://doi.org/10.5194/gmd-16-6875-2023, https://doi.org/10.5194/gmd-16-6875-2023, 2023
Short summary
Short summary
We present an along BGC-Argo track 1D modelling framework. The model physics is constrained by the BGC-Argo temperature and salinity profiles to reduce the uncertainties related to mixed layer dynamics, allowing the evaluation of the biogeochemical formulation and parameterization. We objectively analyse the model with BGC-Argo and satellite data and improve the model biogeochemical dynamics. We present the framework, example cases and routines for model improvement and implementations.
Tanya J. R. Lippmann, Ype van der Velde, Monique M. P. D. Heijmans, Han Dolman, Dimmie M. D. Hendriks, and Ko van Huissteden
Geosci. Model Dev., 16, 6773–6804, https://doi.org/10.5194/gmd-16-6773-2023, https://doi.org/10.5194/gmd-16-6773-2023, 2023
Short summary
Short summary
Vegetation is a critical component of carbon storage in peatlands but an often-overlooked concept in many peatland models. We developed a new model capable of simulating the response of vegetation to changing environments and management regimes. We evaluated the model against observed chamber data collected at two peatland sites. We found that daily air temperature, water level, harvest frequency and height, and vegetation composition drive methane and carbon dioxide emissions.
Chonggang Xu, Bradley Christoffersen, Zachary Robbins, Ryan Knox, Rosie A. Fisher, Rutuja Chitra-Tarak, Martijn Slot, Kurt Solander, Lara Kueppers, Charles Koven, and Nate McDowell
Geosci. Model Dev., 16, 6267–6283, https://doi.org/10.5194/gmd-16-6267-2023, https://doi.org/10.5194/gmd-16-6267-2023, 2023
Short summary
Short summary
We introduce a plant hydrodynamic model for the U.S. Department of Energy (DOE)-sponsored model, the Functionally Assembled Terrestrial Ecosystem Simulator (FATES). To better understand this new model system and its functionality in tropical forest ecosystems, we conducted a global parameter sensitivity analysis at Barro Colorado Island, Panama. We identified the key parameters that affect the simulated plant hydrodynamics to guide both modeling and field campaign studies.
Jianghui Du
Geosci. Model Dev., 16, 5865–5894, https://doi.org/10.5194/gmd-16-5865-2023, https://doi.org/10.5194/gmd-16-5865-2023, 2023
Short summary
Short summary
Trace elements and isotopes (TEIs) are important tools to study the changes in the ocean environment both today and in the past. However, the behaviors of TEIs in marine sediments are poorly known, limiting our ability to use them in oceanography. Here we present a modeling framework that can be used to generate and run models of the sedimentary cycling of TEIs assisted with advanced numerical tools in the Julia language, lowering the coding barrier for the general user to study marine TEIs.
Siyu Zhu, Peipei Wu, Siyi Zhang, Oliver Jahn, Shu Li, and Yanxu Zhang
Geosci. Model Dev., 16, 5915–5929, https://doi.org/10.5194/gmd-16-5915-2023, https://doi.org/10.5194/gmd-16-5915-2023, 2023
Short summary
Short summary
In this study, we estimate the global biogeochemical cycling of Hg in a state-of-the-art physical-ecosystem ocean model (high-resolution-MITgcm/Hg), providing a more accurate portrayal of surface Hg concentrations in estuarine and coastal areas, strong western boundary flow and upwelling areas, and concentration diffusion as vortex shapes. The high-resolution model can help us better predict the transport and fate of Hg in the ocean and its impact on the global Hg cycle.
Maria Val Martin, Elena Blanc-Betes, Ka Ming Fung, Euripides P. Kantzas, Ilsa B. Kantola, Isabella Chiaravalloti, Lyla L. Taylor, Louisa K. Emmons, William R. Wieder, Noah J. Planavsky, Michael D. Masters, Evan H. DeLucia, Amos P. K. Tai, and David J. Beerling
Geosci. Model Dev., 16, 5783–5801, https://doi.org/10.5194/gmd-16-5783-2023, https://doi.org/10.5194/gmd-16-5783-2023, 2023
Short summary
Short summary
Enhanced rock weathering (ERW) is a CO2 removal strategy that involves applying crushed rocks (e.g., basalt) to agricultural soils. However, unintended processes within the N cycle due to soil pH changes may affect the climate benefits of C sequestration. ERW could drive changes in soil emissions of non-CO2 GHGs (N2O) and trace gases (NO and NH3) that may affect air quality. We present a new improved N cycling scheme for the land model (CLM5) to evaluate ERW effects on soil gas N emissions.
Özgür Gürses, Laurent Oziel, Onur Karakuş, Dmitry Sidorenko, Christoph Völker, Ying Ye, Moritz Zeising, Martin Butzin, and Judith Hauck
Geosci. Model Dev., 16, 4883–4936, https://doi.org/10.5194/gmd-16-4883-2023, https://doi.org/10.5194/gmd-16-4883-2023, 2023
Short summary
Short summary
This paper assesses the biogeochemical model REcoM3 coupled to the ocean–sea ice model FESOM2.1. The model can be used to simulate the carbon uptake or release of the ocean on timescales of several hundred years. A detailed analysis of the nutrients, ocean productivity, and ecosystem is followed by the carbon cycle. The main conclusion is that the model performs well when simulating the observed mean biogeochemical state and variability and is comparable to other ocean–biogeochemical models.
Yoshiki Kanzaki, Isabella Chiaravalloti, Shuang Zhang, Noah J. Planavsky, and Christopher T. Reinhard
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-137, https://doi.org/10.5194/gmd-2023-137, 2023
Revised manuscript accepted for GMD
Short summary
Short summary
Soil pH is one of the most commonly measured agronomical and biogeochemical indices, mostly reflecting exchangeable acidity. Explicit simulation of both porewater pH and bulk soil pH is thus crucial to accurate evaluation of alkalinity required to counteract soil acidification and resulting capture of anthropogenic carbon dioxide through the Enhanced Rock Weathering technique. This has been enabled by the updated reactive-transport SCEPTER code and newly developed framework to simulate soil pH.
Hocheol Seo and Yeonjoo Kim
Geosci. Model Dev., 16, 4699–4713, https://doi.org/10.5194/gmd-16-4699-2023, https://doi.org/10.5194/gmd-16-4699-2023, 2023
Short summary
Short summary
Wildfire is a crucial factor in carbon and water fluxes on the Earth system. About 2.1 Pg of carbon is released into the atmosphere by wildfires annually. Because the fire processes are still limitedly represented in land surface models, we forced the daily GFED4 burned area into the land surface model over Alaska and Siberia. The results with the GFED4 burned area significantly improved the simulated carbon emissions and net ecosystem exchange compared to the default simulation.
Boris Ťupek, Aleksi Lehtonen, Alla Yurova, Rose Abramoff, Stefano Manzoni, Bertrand Guenet, Elisa Bruni, Samuli Launiainen, Mikko Peltoniemi, Shoji Hashimoto, Xianglin Tian, Juha Heikkinen, Kari Minkkinen, and Raisa Mäkipää
EGUsphere, https://doi.org/10.5194/egusphere-2023-1523, https://doi.org/10.5194/egusphere-2023-1523, 2023
Short summary
Short summary
Improving representation of peatlands in Earth system models (ESMs) (e.g., in Yasso soil C model coupled with JSBACH model) is rare. We updated Yasso07 moisture dependency for applications on both the mineral soils and peatlands of boreal forest. Our moisture function improved the simulated peatland C stocks and CO2 dynamics. However, due to nature of the measurements used for Bayesian MCMC data assimilation, it contrasts with functions in other ESMs (see graphical abstract).
Hideki Ninomiya, Tomomichi Kato, Lea Végh, and Lan Wu
Geosci. Model Dev., 16, 4155–4170, https://doi.org/10.5194/gmd-16-4155-2023, https://doi.org/10.5194/gmd-16-4155-2023, 2023
Short summary
Short summary
Non-structural carbohydrates (NSCs) play a crucial role in plants to counteract the effects of climate change. We added a new NSC module into the SEIB-DGVM, an individual-based ecosystem model. The simulated NSC levels and their seasonal patterns show a strong agreement with observed NSC data at both point and global scales. The model can be used to simulate the biotic effects resulting from insufficient NSCs, which are otherwise difficult to measure in terrestrial ecosystems globally.
Miquel De Cáceres, Roberto Molowny-Horas, Antoine Cabon, Jordi Martínez-Vilalta, Maurizio Mencuccini, Raúl García-Valdés, Daniel Nadal-Sala, Santiago Sabaté, Nicolas Martin-StPaul, Xavier Morin, Francesco D'Adamo, Enric Batllori, and Aitor Améztegui
Geosci. Model Dev., 16, 3165–3201, https://doi.org/10.5194/gmd-16-3165-2023, https://doi.org/10.5194/gmd-16-3165-2023, 2023
Short summary
Short summary
Regional-level applications of dynamic vegetation models are challenging because they need to accommodate the variation in plant functional diversity. This can be done by estimating parameters from available plant trait databases while adopting alternative solutions for missing data. Here we present the design, parameterization and evaluation of MEDFATE (version 2.9.3), a novel model of forest dynamics for its application over a region in the western Mediterranean Basin.
Jens Heinke, Susanne Rolinski, and Christoph Müller
Geosci. Model Dev., 16, 2455–2475, https://doi.org/10.5194/gmd-16-2455-2023, https://doi.org/10.5194/gmd-16-2455-2023, 2023
Short summary
Short summary
We develop a livestock module for the global vegetation model LPJmL5.0 to simulate the impact of grazing dairy cattle on carbon and nitrogen cycles in grasslands. A novelty of the approach is that it accounts for the effect of feed quality on feed uptake and feed utilization by animals. The portioning of dietary nitrogen into milk, feces, and urine shows very good agreement with estimates obtained from animal trials.
Yimian Ma, Xu Yue, Stephen Sitch, Nadine Unger, Johan Uddling, Lina M. Mercado, Cheng Gong, Zhaozhong Feng, Huiyi Yang, Hao Zhou, Chenguang Tian, Yang Cao, Yadong Lei, Alexander W. Cheesman, Yansen Xu, and Maria Carolina Duran Rojas
Geosci. Model Dev., 16, 2261–2276, https://doi.org/10.5194/gmd-16-2261-2023, https://doi.org/10.5194/gmd-16-2261-2023, 2023
Short summary
Short summary
Plants have been found to respond differently to O3, but the variations in the sensitivities have rarely been explained nor fully implemented in large-scale assessment. This study proposes a new O3 damage scheme with leaf mass per area to unify varied sensitivities for all plant species. Our assessment reveals an O3-induced reduction of 4.8 % in global GPP, with the highest reduction of >10 % for cropland, suggesting an emerging risk of crop yield loss under the threat of O3 pollution.
Winslow D. Hansen, Adrianna Foster, Benjamin Gaglioti, Rupert Seidl, and Werner Rammer
Geosci. Model Dev., 16, 2011–2036, https://doi.org/10.5194/gmd-16-2011-2023, https://doi.org/10.5194/gmd-16-2011-2023, 2023
Short summary
Short summary
Permafrost and the thick soil-surface organic layers that insulate permafrost are important controls of boreal forest dynamics and carbon cycling. However, both are rarely included in process-based vegetation models used to simulate future ecosystem trajectories. To address this challenge, we developed a computationally efficient permafrost and soil organic layer module that operates at fine spatial (1 ha) and temporal (daily) resolutions.
Heewon Jung, Hyun-Seob Song, and Christof Meile
Geosci. Model Dev., 16, 1683–1696, https://doi.org/10.5194/gmd-16-1683-2023, https://doi.org/10.5194/gmd-16-1683-2023, 2023
Short summary
Short summary
Microbial activity responsible for many chemical transformations depends on environmental conditions. These can vary locally, e.g., between poorly connected pores in porous media. We present a modeling framework that resolves such small spatial scales explicitly, accounts for feedback between transport and biogeochemical conditions, and can integrate state-of-the-art representations of microbes in a computationally efficient way, making it broadly applicable in science and engineering use cases.
Arthur Guignabert, Quentin Ponette, Frédéric André, Christian Messier, Philippe Nolet, and Mathieu Jonard
Geosci. Model Dev., 16, 1661–1682, https://doi.org/10.5194/gmd-16-1661-2023, https://doi.org/10.5194/gmd-16-1661-2023, 2023
Short summary
Short summary
Spatially explicit and process-based models are useful to test innovative forestry practices under changing and uncertain conditions. However, their larger use is often limited by the restricted range of species and stand structures they can reliably account for. We therefore calibrated and evaluated such a model, HETEROFOR, for 23 species across southern Québec. Our results showed that the model is robust and can predict accurately both individual tree growth and stand dynamics in this region.
Maureen Beaudor, Nicolas Vuichard, Juliette Lathière, Nikolaos Evangeliou, Martin Van Damme, Lieven Clarisse, and Didier Hauglustaine
Geosci. Model Dev., 16, 1053–1081, https://doi.org/10.5194/gmd-16-1053-2023, https://doi.org/10.5194/gmd-16-1053-2023, 2023
Short summary
Short summary
Ammonia mainly comes from the agricultural sector, and its volatilization relies on environmental variables. Our approach aims at benefiting from an Earth system model framework to estimate it. By doing so, we represent a consistent spatial distribution of the emissions' response to environmental changes.
We greatly improved the seasonal cycle of emissions compared with previous work. In addition, our model includes natural soil emissions (that are rarely represented in modeling approaches).
Rui Ying, Fanny M. Monteiro, Jamie D. Wilson, and Daniela N. Schmidt
Geosci. Model Dev., 16, 813–832, https://doi.org/10.5194/gmd-16-813-2023, https://doi.org/10.5194/gmd-16-813-2023, 2023
Short summary
Short summary
Planktic foraminifera are marine-calcifying zooplankton; their shells are widely used to measure past temperature and productivity. We developed ForamEcoGEnIE 2.0 to simulate the four subgroups of this organism. We found that the relative abundance distribution agrees with marine sediment core-top data and that carbon export and biomass are close to sediment trap and plankton net observations respectively. This model provides the opportunity to study foraminiferal ecology in any geological era.
Onur Kerimoglu, Markus Pahlow, Prima Anugerahanti, and Sherwood Lan Smith
Geosci. Model Dev., 16, 95–108, https://doi.org/10.5194/gmd-16-95-2023, https://doi.org/10.5194/gmd-16-95-2023, 2023
Short summary
Short summary
In classical models that track the changes in the elemental composition of phytoplankton, additional state variables are required for each element resolved. In this study, we show how the behavior of such an explicit model can be approximated using an
instantaneous acclimationapproach, in which the elemental composition of the phytoplankton is assumed to adjust to an optimal value instantaneously. Through rigorous tests, we evaluate the consistency of this scheme.
Yuan Zhang, Devaraju Narayanappa, Philippe Ciais, Wei Li, Daniel Goll, Nicolas Vuichard, Martin G. De Kauwe, Laurent Li, and Fabienne Maignan
Geosci. Model Dev., 15, 9111–9125, https://doi.org/10.5194/gmd-15-9111-2022, https://doi.org/10.5194/gmd-15-9111-2022, 2022
Short summary
Short summary
There are a few studies to examine if current models correctly represented the complex processes of transpiration. Here, we use a coefficient Ω, which indicates if transpiration is mainly controlled by vegetation processes or by turbulence, to evaluate the ORCHIDEE model. We found a good performance of ORCHIDEE, but due to compensation of biases in different processes, we also identified how different factors control Ω and where the model is wrong. Our method is generic to evaluate other models.
Thomas Neumann, Hagen Radtke, Bronwyn Cahill, Martin Schmidt, and Gregor Rehder
Geosci. Model Dev., 15, 8473–8540, https://doi.org/10.5194/gmd-15-8473-2022, https://doi.org/10.5194/gmd-15-8473-2022, 2022
Short summary
Short summary
Marine ecosystem models are usually constrained by the elements nitrogen and phosphorus and consider carbon in organic matter in a fixed ratio. Recent observations show a substantial deviation from the simulated carbon cycle variables. In this study, we present a marine ecosystem model for the Baltic Sea which allows for a flexible uptake ratio for carbon, nitrogen, and phosphorus. With this extension, the model reflects much more reasonable variables of the marine carbon cycle.
Arsène Druel, Simon Munier, Anthony Mucia, Clément Albergel, and Jean-Christophe Calvet
Geosci. Model Dev., 15, 8453–8471, https://doi.org/10.5194/gmd-15-8453-2022, https://doi.org/10.5194/gmd-15-8453-2022, 2022
Short summary
Short summary
Crop phenology and irrigation is implemented into a land surface model able to work at a global scale. A case study is presented over Nebraska (USA). Simulations with and without the new scheme are compared to different satellite-based observations. The model is able to produce a realistic yearly irrigation water amount. The irrigation scheme improves the simulated leaf area index, gross primary productivity, evapotransipiration, and land surface temperature.
Thomas Wutzler, Lin Yu, Marion Schrumpf, and Sönke Zaehle
Geosci. Model Dev., 15, 8377–8393, https://doi.org/10.5194/gmd-15-8377-2022, https://doi.org/10.5194/gmd-15-8377-2022, 2022
Short summary
Short summary
Soil microbes process soil organic matter and affect carbon storage and plant nutrition at the ecosystem scale. We hypothesized that decadal dynamics is constrained by the ratios of elements in litter inputs, microbes, and matter and that microbial community optimizes growth. This allowed the SESAM model to descibe decadal-term carbon sequestration in soils and other biogeochemical processes explicitly accounting for microbial processes but without its problematic fine-scale parameterization.
Ensheng Weng, Igor Aleinov, Ram Singh, Michael J. Puma, Sonali S. McDermid, Nancy Y. Kiang, Maxwell Kelley, Kevin Wilcox, Ray Dybzinski, Caroline E. Farrior, Stephen W. Pacala, and Benjamin I. Cook
Geosci. Model Dev., 15, 8153–8180, https://doi.org/10.5194/gmd-15-8153-2022, https://doi.org/10.5194/gmd-15-8153-2022, 2022
Short summary
Short summary
We develop a demographic vegetation model to improve the representation of terrestrial vegetation dynamics and ecosystem biogeochemical cycles in the Goddard Institute for Space Studies ModelE. The individual-based competition for light and soil resources makes the modeling of eco-evolutionary optimality possible. This model will enable ModelE to simulate long-term biogeophysical and biogeochemical feedbacks between the climate system and land ecosystems at decadal to centurial temporal scales.
Yitong Yao, Emilie Joetzjer, Philippe Ciais, Nicolas Viovy, Fabio Cresto Aleina, Jerome Chave, Lawren Sack, Megan Bartlett, Patrick Meir, Rosie Fisher, and Sebastiaan Luyssaert
Geosci. Model Dev., 15, 7809–7833, https://doi.org/10.5194/gmd-15-7809-2022, https://doi.org/10.5194/gmd-15-7809-2022, 2022
Short summary
Short summary
To facilitate more mechanistic modeling of drought effects on forest dynamics, our study implements a hydraulic module to simulate the vertical water flow, change in water storage and percentage loss of stem conductance (PLC). With the relationship between PLC and tree mortality, our model can successfully reproduce the large biomass drop observed under throughfall exclusion. Our hydraulic module provides promising avenues benefiting the prediction for mortality under future drought events.
Arthur Nicolaus Fendrich, Philippe Ciais, Emanuele Lugato, Marco Carozzi, Bertrand Guenet, Pasquale Borrelli, Victoria Naipal, Matthew McGrath, Philippe Martin, and Panos Panagos
Geosci. Model Dev., 15, 7835–7857, https://doi.org/10.5194/gmd-15-7835-2022, https://doi.org/10.5194/gmd-15-7835-2022, 2022
Short summary
Short summary
Currently, spatially explicit models for soil carbon stock can simulate the impacts of several changes. However, they do not incorporate the erosion, lateral transport, and deposition (ETD) of soil material. The present work developed ETD formulation, illustrated model calibration and validation for Europe, and presented the results for a depositional site. We expect that our work advances ETD models' description and facilitates their reproduction and incorporation in land surface models.
Kazumi Ozaki, Devon B. Cole, Christopher T. Reinhard, and Eiichi Tajika
Geosci. Model Dev., 15, 7593–7639, https://doi.org/10.5194/gmd-15-7593-2022, https://doi.org/10.5194/gmd-15-7593-2022, 2022
Short summary
Short summary
A new biogeochemical model (CANOPS-GRB v1.0) for assessing the redox stability and dynamics of the ocean–atmosphere system on geologic timescales has been developed. In this paper, we present a full description of the model and its performance. CANOPS-GRB is a useful tool for understanding the factors regulating atmospheric O2 level and has the potential to greatly refine our current understanding of Earth's oxygenation history.
Cited articles
Aubinet, M., Chermanne, B., Vandenhaute, M., Longdoz, B., Yernaux, M., and Laitat, E.: Long Term Carbon Dioxide Exchange Above a Mixed Forest in the Belgian Ardennes, Agr. Forest Meteorol., 108, 293–315, 2001.
Baldocchi, D.: Flux Footprints Within and Over Forest Canopies, Bound.-Lay. Meteorol., 85, 273–292, 1997.
Barcza, Z., Kern, A., Haszpra, L., and Kljun, N.: Spatial Representativeness of Tall Tower Eddy Covariance Measurements Using Remote Sensing and Footprint Analysis, Agr. Forest Meteorol., 149, 795–807, 2009.
Batchvarova, E. and Gryning, S.-E.: Applied Model for the Growth of the Daytime Mixed Layer, Bound.-Lay. Meteorol., 56, 261–274, 1991.
Chang, J. C. and Hanna, S. R.: Air Quality Model Performance Evaluation, Meteorol. Atmos. Phys., 87, 167–196, 2004.
Chasmer, L., Kljun, N., Barr, A., Black, A., Hopkinson, C., McCaughey, J., and Treitz, P.: Influences of Vegetation Structure and Elevation on CO2 Uptake in a Mature Jack Pine Forest in Saskatchewan, Canada, Can. J. Forest Res., 38, 2746–2761, 2008.
Chasmer, L., Barr, A. G., Hopkinson, C., McCaughey, J. H., Treitz, P., Black, T. A., and Shashkov, A.: Scaling and Assessment of GPP from MODIS Using a Combination of Airborne Lidar and Eddy Covariance Measurements over Jack Pine Forests, Remote Sens. Environ., 113, 82–93, 2009.
Deardorff, J. W. and Willis, G. E.: A Parameterization of Diffusion into the Mixed Layer, J. Appl. Meteor., 14, 1451–1458, 1975.
de Haan, P. and Rotach, M. W.: A Novel Approach to Atmospheric Dispersion Modelling: the Puff-Particle Model (PPM), Q. J. Roy. Meteorol. Soc., 124, 2771–2792, 1998.
Detto, M., Montaldo, N., Albertson, J. D., Mancini, M., and Katul, G.: Soil Moisture and Vegetation Controls on Evapotranspiration in a Heterogeneous Mediterranean Ecosystem on Sardinia, Italy, Water Resour. Res., 42, W08419, https://doi.org/10.1029/2005WR004693, 2006.
Flesch, T. K.: The Footprint for Flux Measurements, from Backward Lagrangian Stochastic Models, Bound.-Lay. Meteorol., 78, 399–404, 1996.
Gelybó, G., Barcza, Z., Kern, A., and Kljun, N.: Effect of Spatial Heterogeneity on the Validation of Remote Sensing based GPP Estimations, Agr. Forest Meteorol., 174, 43–53, 2013.
Göckede, M., Foken, T., Aubinet, M., Aurela, M., Banza, J., Bernhofer, C., Bonnefond, J. M., Brunet, Y., Carrara, A., Clement, R., Dellwik, E., Elbers, J., Eugster, W., Fuhrer, J., Granier, A., Grünwald, T., Heinesch, B., Janssens, I. A., Knohl, A., Koeble, R., Laurila, T., Longdoz, B., Manca, G., Marek, M., Markkanen, T., Mateus, J., Matteucci, G., Mauder, M., Migliavacca, M., Minerbi, S., Moncrieff, J., Montagnani, L., Moors, E., Ourcival, J.-M., Papale, D., Pereira, J., Pilegaard, K., Pita, G., Rambal, S., Rebmann, C., Rodrigues, A., Rotenberg, E., Sanz, M. J., Sedlak, P., Seufert, G., Siebicke, L., Soussana, J. F., Valentini, R., Vesala, T., Verbeeck, H., and Yakir, D.: Quality control of CarboEurope flux data – Part 1: Coupling footprint analyses with flux data quality assessment to evaluate sites in forest ecosystems, Biogeosciences, 5, 433–450, https://doi.org/10.5194/bg-5-433-2008, 2008.
Grimmond, C. S. B. and Oke, T. R.: Aerodynamic Properties of Urban Areas Derived from Analysis of Surface Form, J. Appl. Meteorol., 38, 1262–1292, 1999.
Haenel, H.-D. and Grünhage, L.: Footprint Analysis: A Closed Analytical Solution Based on Height-Dependent Profiles of Wind Speed and Eddy Viscosity, Bound.-Lay. Meteorol., 93, 395–409, 1999.
Hanna, S. R. and Chang, J. C.: Hybrid Plume Dispersion Model (HPDM) Improvements and Testing at Three Field Sites, Atmos. Environ., 27A, 1491–1508, 1993.
Hanna, S. R., Chang, J. C., and Strimaitis, D. G.: Hazardous Gas Model Evaluation with Field Observations, Atmos. Environ., 27A, 2265–2281, 1993.
Hellsten, A., Luukkonen, S. M., Steinfeld, G., Kanani-Suhring, F., Markkanen, T., Järvi, L., Vesala , T., and Raasch, S.: Footprint Evaluation for Flux and Concentration Measurements for an Urban-like Canopy with Coupled Lagrangian Stochastic and Large-eddy Simulation Models, Bound.-Lay. Meteorol., 157, 191–217, 2015.
Högström, U.: Review of Some Basic Characteristics of the Atmospheric Surface Layer, Bound.-Lay. Meteorol., 78, 215–246, 1996.
Holtslag, A. A. M. and Nieuwstadt, F. T. M.: Scaling the Atmospheric Boundary-Layer, Bound.-Lay. Meteorol., 36, 201–209, 1986.
Horst, T. W. and Weil, J. C.: Footprint Estimation for Scalar Flux Measurements in the Atmospheric Surface Layer, Bound.-Lay. Meteorol., 59, 279–296, 1992.
Horst, T. W. and Weil, J. C.: How Far is Far Enough?: The Fetch Requirements for Micrometeorological Measurement of Surface Fluxes, J. Atmos. Ocean. Tech., 11, 1018–1025, 1994.
Hsieh, C. I., Katul, G., and Chi, T.: An Approximate Analytical Model for Footprint Estimation of Scalar Fluxes in Thermally Stratified Atmospheric Flows, Adv. Water Resour., 23, 765–772, 2000.
Hsieh, C. I., Siqueira, M., Katul, G., and Chu, C.-R.: Predicting Scalar Source-Sink and Flux Distributions Within a Forest Canopy Using a 2-D Lagrangian Stochastic Dispersion Model, Bound.-Lay. Meteorol., 109, 113–138, 2003.
Hutjes, R. W. A., Vellinga, O. S., Gioli, B., and Miglietta, F.: Dis-aggregation of Airborne Flux Measurements Using Footprint Analysis, Agr. Forest Meteorol., 150, 966–983, 2010.
Kim, J., Guo, Q., Baldocchi, D. D., Leclerc, M. Y., Xu, L., and Schmid, H. P.: Upscaling Fluxes from Tower to Landscape: Overlaying Flux Footprints on High-resolution (IKONOS) Images of Vegetation Cover, Agr. Forest Meteorol., 136, 132–146, 2006.
Kljun, N., Rotach, M. W., and Schmid, H. P.: A 3D Backward Lagrangian Footprint Model for a Wide Range of Boundary Layer Stratifications, Bound.-Lay. Meteorol., 103, 205–226, 2002.
Kljun, N., Kormann, R., Rotach, M. W., and Meixner, F. X.: Comparison of the L}agrangian Footprint Model {LPDM-B with an Analytical Footprint Model, Bound.-Lay. Meteorol., 106, 349–355, 2003.
Kljun, N., Kastner-Klein, P., Fedorovich, E., and Rotach, M. W.: Evaluation of Lagrangian Footprint Model Using Data from a Wind Tunnel Convective Boundary Layer, Agr. Forest Meteorol., 127, 189–201, 2004a.
Kljun, N., Rotach, M. W., and Calanca, P.: A Simple Parameterisation for Flux Footprint Predictions, Bound.-Lay. Meteorol., 112, 503–523, 2004b.
Kormann, R. and Meixner, F. X.: An Analytical Footprint Model for Non-Neutral Stratification, Bound.-Lay. Meteorol., 99, 207–224, 2001.
Kustas, W. P., Anderson, M. C., French, A. N., and Vickers, D.: Using a Remote Sensing Field Experiment to Investigate Flux-footprint Relations and Flux Sampling Distributions for Tower and Aircraft-based Observations, Adv. Water Resour., 29, 355–368, 2006.
Lagarias, J. C., Reeds, J. A., Wright, M. H., and Wright, P. E.: Convergence Properties of the Nelder-Mead Simplex Method in Low Dimensions, SIAM J. Optimiz., 9, 112–147, 1998.
Leclerc, M. Y. and Foken, T.: Footprints in Micrometeorology and Ecology, 1st Edn., Springer, Heidelberg, Germany, New York, USA, Dordrecht, the Netherlands, London, UK, 2014.
Leclerc, M. Y. and Thurtell, G. W.: Footprint Prediction of Scalar Fluxes Using a Markovian Analysis, Bound.-Lay. Meteorol., 52, 247–258, 1990.
Leclerc, M. Y., Shen, S., and Lamb, B.: Observations and Large-Eddy Simulation Modeling of Footprints in the Lower Convective Boundary Layer, J. Geophys. Res., 102, 9323–9334, 1997.
Li, F., Kustas, W. P., Anderson, M. C., Prueger, J. H., and Scott, R. L.: Effect of Remote Sensing Spatial Resolution on Interpreting Tower-based Flux Observations, Remote Sens. Environ., 112, 337–349, 2008.
Lindroth, A., Grelle, A., and Morén, A.-S.: Long-term Measurements of Boreal Forest Carbon Balance Reveal Large Temperature Sensitivity, Glob. Change Biol., 4, 443–450, 1998.
Luhar, A. K. and Rao, K. S.: Source Footprint Analysis for Scalar Fluxes Measured in Flows over an Inhomogeneous Surface, NATO Chal. M., 18, 315–322, 1994.
Markkanen, T., Steinfeld, G., Kljun, N., Raasch, S., and Foken, T.: Comparison of conventional Lagrangian stochastic footprint models against LES driven footprint estimates, Atmos. Chem. Phys., 9, 5575–5586, https://doi.org/10.5194/acp-9-5575-2009, 2009.
Mauder, M., Desjardins, R. L., and MacPherson, I.: Creating Surface Flux Maps from Airborne Measurements: Application to the Mackenzie Area GEWEX Study MAGS 1999, Bound.-Lay. Meteorol., 129, 431–450, 2008.
Mauder, M., Cuntz, M., Drüe, C., Graf, A., Rebmann, C., Schmid, H. P., Schmidt, M., and Steinbrecher, R.: A strategy for Quality and Uncertainty assessment of Long-term Eddy-covariance Measurements, Agr. Forest Meteorol., 169, 122–135, 2013.
Maurer, K. D., Hardiman, B. S., Vogel, C. S., and Bohrer, G.: Canopy-structure effects on surface roughness parameters: Observations in a Great Lakes mixed-deciduous forest, Agr. Forest Meteorol., 177, 24–34, 2013.
Metzger, S., Junkermann, W., Mauder, M., Beyrich, F., Butterbach-Bahl, K., Schmid, H. P., and Foken, T.: Eddy-covariance flux measurements with a weight-shift microlight aircraft, Atmos. Meas. Tech., 5, 1699–1717, https://doi.org/10.5194/amt-5-1699-2012, 2012.
Nagy, M. T., Janssens, I. A., Yuste, J. C., Carrara, A., and Ceulemans, R.: Footprint-adjusted Net Ecosystem CO2 Exchange and Carbon Balance Components of a Temperate Forest, Agr. Forest Meteorol., 139, 344–360, 2006.
Nieuwstadt, F. T. M.: Application of Mixed-Layer Similarity to the Observed Dispersion from a Ground-Level Source, J. Appl. Meteorol., 19, 157–162, 1980.
Nieuwstadt, F. T. M.: The Steady-state Height and Resistance Laws of the Nocturnal Boundary Layer: Theory Compared with Cabauw Observations, Bound.-Lay. Meteorol., 20, 3–17, 1981.
Pasquill, F. and Smith, F. B.: Atmospheric Diffusion, Ellis Horwood Limited, 3rd Edn., J. Wiley and Sons, New York, USA, 1983.
Rahman, A. F., Gamon, J. A., Fuentes, D. A., Roberts, D. A., and Prentiss, D.: Modeling Spatially Distributed Ecosystem Flux of Boreal Forest Using Hyperspectral Indices from AVIRIS Imagery, J. Geophys. Res.-Atmos., 106, 33579–33591, 2001.
Rannik, Ü., Aubinet, M., Kurbanmuradov, O., Sabelfeld, K. K., Markkanen, T., and Vesala, T.: Footprint Analysis for Measurements over a Heterogeneous Forest, Bound.-Lay. Meteorol., 97, 137–166, 2000.
Raupach, M. R., Antonia, R. A., and Rajagopalan, S.: Rough-Wall Turbulent Boundary Layers, Appl. Mech. Rev., 44, 1–25, 1991.
Rebmann, C., Göckede, M., Foken, T., Aubinet, M., Aurela, M., Berbigier, P., Bernhofer, C., Buchmann, N., Carrara, A., Cescatti, A., Ceulemans, R., Clement, R., Elbers, J. A., Granier, A., Grünwald, T., Guyon, D., Havránková, K., Heinesch, B., Knohl, A., Laurila, T., Longdoz, B., Marcolla, B., Markkanen, T., Miglietta, F., Moncrieff, K., Montagnani, L., Moors, E., Nardino, M., Ourcival, J.-M., Rambal, S., Rannik, Ü., Rotenberg, E., Sedlak, P., Unterhuber, G., Vesala, T., and Yakir, D.: Quality Analysis Applied on Eddy Covariance Measurements at Complex Forest Sites Using Footprint Modelling, Theor. Appl. Climatol., 80, 121–141, 2005.
Rotach, M. W.: Determination of the Zero Plane Displacement in an Urban Environment, Bound.-Lay. Meteorol., 67, 187–193, 1994.
Rotach, M. W. and Calanca, P.: Microclimate, in: Encyclopedia of Atmospheric Sciences, edited by: North, G. R., Vol. 1, 258–264, Academic Press, Elsevier Science Publishing Co. Inc., London, UK, 2nd Edn., 2014.
Rotach, M. W., Gryning, S.-E., and Tassone, C.: A Two-Dimensional Lagrangian Stochastic Dispersion Model for Daytime Conditions, Q. J. Roy. Meteorol. Soc., 122, 367–389, 1996.
Rotach, M. W., Gryning, S.-E., Batchvarova, E., Christen, A., and Vogt, R.: Pollutant Dispersion Close to an Urban Surface: the BUBBLE Tracer Experiment, Meteorol. Atmos. Phys., 87, 39–56, 2004.
Schmid, H. P.: Source Areas for Scalars and Scalar Fluxes, Bound.-Lay. Meteorol., 67, 293–318, 1994.
Schmid, H. P.: Experimental Design for Flux Measurements: Matching Scales of Observations and Fluxes, Agr. Forest Meteorol., 87, 179–200, 1997.
Schmid, H. P.: Footprint Modeling for Vegetation Atmosphere Exchange Studies: A Review and Perspective, Agr. Forest Meteorol., 113, 159–184, 2002.
Schmid, H. P. and Lloyd, C. R.: Spatial Representativeness and the Location Bias of Flux Footprints over Inhomogeneous Areas, Agr. Forest Meteorol., 93, 195–209, 1999.
Schmid, H. P. and Oke, T. R.: A Model to Estimate the Source Area Contributing to Turbulent Exchange in the Surface Layer over Patchy Terrain, Q. J. Roy. Meteorol. Soc., 116, 965–988, 1990.
Schuepp, P. H., Leclerc, M. Y., Macpherson, J. I., and Desjardins, R. L.: Footprint Prediction of Scalar Fluxes from Analytical Solutions of the Diffusion Equation, Bound.-Lay. Meteorol., 50, 355–373, 1990.
Seibert, P., Beyrich, F., Gryning, S.-E., Joffre, S., Rasmussen, A., and Tercier, P.: Review and Intercomparison of Operational Methods for the Determination of the Mixing Height, Atmos. Environ., 34, 1001–1027, 2000.
Sogachev, A. and Lloyd, J.: Using a One-And-a-Half Order Closure Model of the Atmospheric Boundary Layer for Surface Flux Footprint Estimation, Bound.-Lay. Meteorol., 112, 467–502, 2004.
Sogachev, A., Leclerc, M. Y., Karipot, A., Zhang, G., and Vesala, T.: Effect of Clearcuts on Footprints and Flux Measurements Above a Forest Canopy, Agr. Forest Meteorol., 133, 182–196, 2005.
Steinfeld, G., Raasch, S., and Markkanen, T.: Footprints in Homogeneously and Heterogeneously Driven Boundary Layers Derived from a Lagrangian Stochastic Particle Model Embedded into Large-Eddy Simulation, Bound.-Lay. Meteorol., 129, 225–248, 2008.
Stull, R. B.: An Introduction to Boundary Layer Meteorology, Kluwer Academic Publishers, Dordrecht, the Netherlands, 680 pp., 1988.
Sutherland, G., Chasmer, L. E., Petrone, R. M., Kljun, N., and Devito, K. J.: Evaluating the Use of Spatially Varying Versus Bulk Average 3D Vegetation Structural Inputs to Modelled Evapotranspiration Within Heterogeneous Land Cover Types, Ecohydrology, 7, 1545–1559, 2014.
Taylor, G. I.: Diffusion by Continuous Movements, P. Lond. Math. Soc., 20, 196–211, 1921.
Tennekes, H.: Similarity Laws and Scale Relations in Planetary Boundary Layers, in: Workshop on Micrometeorology, edited by: Haugen, D. A., Amer. Meteorol. Soc., Boston, USA, 1973.
Thomson, D. J.: Criteria for the Selection of Stochastic Models of Particle Trajectories in Turbulent Flows, J. Fluid Mech., 180, 529–556, 1987.
Vesala, T., Kljun, N., Rannik, Ü., Rinne, J., Sogachev, A., Markkanen, T., Sabelfeld, K., Foken, T., and Leclerc, M.: Flux and Concentration Footprint Modelling: State of the Art, Environ. Pollut., 152, 653–666, 2008.
Wang, W. and Davis, K. J.: A Numerical Study of the Influence of a Clearcut on Eddy-Covariance Fluxes of CO2 Measured Above a Forest, Agr. Forest Meteorol., 148, 1488–1500, 2008.
Weil, J. C. and Horst, T. W.: Footprint Estimates for Atmospheric Flux Measurements in the Convective Boundary Layer, in: Precipitation Scavening and Atmosphere – Surface Exchange, edited by: Schartz, S. and Slinn, W., Vol. 2, 717–728, Hemisphere Publishing, Washington, D.C., USA, 1992.
Wilson, J. D. and Swaters, G. E.: The Source Area Influencing a Measurement in the Planetary Boundary Layer: The "Footprint" and the "Distribution of Contact Distance", Bound.-Lay. Meteorol., 55, 25–46, 1991.
Zilitinkevich, S. S.: On the Determination of the Height of the Ekman Boundary Layer, Bound.-Lay. Meteorol., 3, 141–145, 1972.
Zilitinkevich, S. S. and Mironov, D. V.: A Mulit-Limit Formulation for the Equilibrium Depth of a Stably Stratified Boundary Layer, Bound.-Lay. Meteorol., 81, 325–351, 1996.
Zilitinkevich, S. S., Esau, I., and Baklanov, A.: Further Comments on the Equilibrium Height of Neutral and Stable Planetary Boundary Layers, Q. J. Roy. Meteorol. Soc., 133, 265–271, 2007.
Zilitinkevich, S. S., Tyuryakov, S. A., Troitskaya, Y. I., and Mareev, E. A.: Theoretical Models of the Height of the Atmospheric Boundary Layer and Turbulent Entrainment at Its Upper Boundary, Izv. Atmos. Ocean. Phys., 48, 133–142, 2012.
Short summary
Flux footprint models describe the surface area of influence of a flux measurement. They are used for designing flux tower sites, and for interpretation of flux measurements. The two-dimensional footprint parameterisation (FFP) presented here is suitable for processing large data sets, and, unlike other fast footprint models, FFP is applicable to daytime or night-time measurements, fluxes from short masts over grassland to tall towers over mature forests, and even to airborne flux measurements.
Flux footprint models describe the surface area of influence of a flux measurement. They are...
