Articles | Volume 17, issue 3
https://doi.org/10.5194/gmd-17-1409-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-17-1409-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Development and technical paper
| 
16 Feb 2024
Development and technical paper |
| 16 Feb 2024
| 16 Feb 2024
Numerical coupling of aerosol emissions, dry removal, and turbulent mixing in the E3SM Atmosphere Model version 1 (EAMv1) – Part 2: A semi-discrete error analysis framework for assessing coupling schemes
Center for Applied Scientific Computing, Lawrence Livermore National Laboratory, Livermore, California, USA
Atmospheric, Climate, and Earth Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA
Carol S. Woodward
Center for Applied Scientific Computing, Lawrence Livermore National Laboratory, Livermore, California, USA
Quan M. Bui
Center for Applied Scientific Computing, Lawrence Livermore National Laboratory, Livermore, California, USA
now at: Blue River Technology, Sunnyvale, California, USA
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Hui Wan, Kai Zhang, Christopher J. Vogl, Carol S. Woodward, Richard C. Easter, Philip J. Rasch, Yan Feng, and Hailong Wang
Geosci. Model Dev., 17, 1387–1407, https://doi.org/10.5194/gmd-17-1387-2024, https://doi.org/10.5194/gmd-17-1387-2024, 2024
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Sophisticated numerical models of the Earth's atmosphere include representations of many physical and chemical processes. In numerical simulations, these processes need to be calculated in a certain sequence. This study reveals the weaknesses of the sequence of calculations used for aerosol processes in a global atmosphere model. A revision of the sequence is proposed and its impacts on the simulated global aerosol climatology are evaluated.
Yu Yao, Po-Lun Ma, Yi Qin, Matthew W. Christensen, Hui Wan, Kai Zhang, Balwinder Singh, Meng Huang, and Mikhail Ovchinnikov
EGUsphere, https://doi.org/10.5194/egusphere-2024-523, https://doi.org/10.5194/egusphere-2024-523, 2024
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Giant aerosols have substantial effects on warm rain formation. However, it remains challenging to quantify the impact of giant particles at global scale. In this work, we applied earth system model to investigate its impacts by implementing new giant aerosol treatments to consider its physical process. We found this approach substantially affect liquid cloud and improved model's precipitation response to aerosols. Our findings demonstrate the significant impact of giant aerosols on climate.
Hui Wan, Kai Zhang, Christopher J. Vogl, Carol S. Woodward, Richard C. Easter, Philip J. Rasch, Yan Feng, and Hailong Wang
Geosci. Model Dev., 17, 1387–1407, https://doi.org/10.5194/gmd-17-1387-2024, https://doi.org/10.5194/gmd-17-1387-2024, 2024
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Sophisticated numerical models of the Earth's atmosphere include representations of many physical and chemical processes. In numerical simulations, these processes need to be calculated in a certain sequence. This study reveals the weaknesses of the sequence of calculations used for aerosol processes in a global atmosphere model. A revision of the sequence is proposed and its impacts on the simulated global aerosol climatology are evaluated.
Shixuan Zhang, Kai Zhang, Hui Wan, and Jian Sun
Geosci. Model Dev., 15, 6787–6816, https://doi.org/10.5194/gmd-15-6787-2022, https://doi.org/10.5194/gmd-15-6787-2022, 2022
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This study investigates the nudging implementation in the EAMv1 model. We find that (1) revising the sequence of calculations and using higher-frequency constraining data to improve the performance of a simulation nudged to EAMv1’s own meteorology, (2) using the relocated nudging tendency and 3-hourly ERA5 reanalysis to obtain a better agreement between nudged simulations and observations, and (3) using wind-only nudging are recommended for the estimates of global mean aerosol effects.
Kai Zhang, Wentao Zhang, Hui Wan, Philip J. Rasch, Steven J. Ghan, Richard C. Easter, Xiangjun Shi, Yong Wang, Hailong Wang, Po-Lun Ma, Shixuan Zhang, Jian Sun, Susannah M. Burrows, Manish Shrivastava, Balwinder Singh, Yun Qian, Xiaohong Liu, Jean-Christophe Golaz, Qi Tang, Xue Zheng, Shaocheng Xie, Wuyin Lin, Yan Feng, Minghuai Wang, Jin-Ho Yoon, and L. Ruby Leung
Atmos. Chem. Phys., 22, 9129–9160, https://doi.org/10.5194/acp-22-9129-2022, https://doi.org/10.5194/acp-22-9129-2022, 2022
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Here we analyze the effective aerosol forcing simulated by E3SM version 1 using both century-long free-running and short nudged simulations. The aerosol forcing in E3SMv1 is relatively large compared to other models, mainly due to the large indirect aerosol effect. Aerosol-induced changes in liquid and ice cloud properties in E3SMv1 have a strong correlation. The aerosol forcing estimates in E3SMv1 are sensitive to the parameterization changes in both liquid and ice cloud processes.
Hui Wan, Kai Zhang, Philip J. Rasch, Vincent E. Larson, Xubin Zeng, Shixuan Zhang, and Ross Dixon
Geosci. Model Dev., 15, 3205–3231, https://doi.org/10.5194/gmd-15-3205-2022, https://doi.org/10.5194/gmd-15-3205-2022, 2022
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This paper describes a tool embedded in a global climate model for sampling atmospheric conditions and monitoring physical processes as a numerical simulation is being carried out. The tool facilitates process-level model evaluation by allowing the users to select a wide range of quantities and processes to monitor at run time without having to do tedious ad hoc coding.
Po-Lun Ma, Bryce E. Harrop, Vincent E. Larson, Richard B. Neale, Andrew Gettelman, Hugh Morrison, Hailong Wang, Kai Zhang, Stephen A. Klein, Mark D. Zelinka, Yuying Zhang, Yun Qian, Jin-Ho Yoon, Christopher R. Jones, Meng Huang, Sheng-Lun Tai, Balwinder Singh, Peter A. Bogenschutz, Xue Zheng, Wuyin Lin, Johannes Quaas, Hélène Chepfer, Michael A. Brunke, Xubin Zeng, Johannes Mülmenstädt, Samson Hagos, Zhibo Zhang, Hua Song, Xiaohong Liu, Michael S. Pritchard, Hui Wan, Jingyu Wang, Qi Tang, Peter M. Caldwell, Jiwen Fan, Larry K. Berg, Jerome D. Fast, Mark A. Taylor, Jean-Christophe Golaz, Shaocheng Xie, Philip J. Rasch, and L. Ruby Leung
Geosci. Model Dev., 15, 2881–2916, https://doi.org/10.5194/gmd-15-2881-2022, https://doi.org/10.5194/gmd-15-2881-2022, 2022
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An alternative set of parameters for E3SM Atmospheric Model version 1 has been developed based on a tuning strategy that focuses on clouds. When clouds in every regime are improved, other aspects of the model are also improved, even though they are not the direct targets for calibration. The recalibrated model shows a lower sensitivity to anthropogenic aerosols and surface warming, suggesting potential improvements to the simulated climate in the past and future.
Hui Wan, Shixuan Zhang, Philip J. Rasch, Vincent E. Larson, Xubin Zeng, and Huiping Yan
Geosci. Model Dev., 14, 1921–1948, https://doi.org/10.5194/gmd-14-1921-2021, https://doi.org/10.5194/gmd-14-1921-2021, 2021
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Numerical models used in weather and climate research and prediction unavoidably contain numerical errors resulting from temporal discretization, and the impact of such errors can be substantial. Complex process interactions often make it difficult to pinpoint the exact sources of such errors. This study uses a series of sensitivity experiments to identify components in a global atmosphere model that are responsible for time step sensitivities in various cloud regimes.
Benjamin N. O. Kuffour, Nicholas B. Engdahl, Carol S. Woodward, Laura E. Condon, Stefan Kollet, and Reed M. Maxwell
Geosci. Model Dev., 13, 1373–1397, https://doi.org/10.5194/gmd-13-1373-2020, https://doi.org/10.5194/gmd-13-1373-2020, 2020
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Integrated hydrologic models (IHMs) were developed in order to allow for more accurate simulations of real-world ecohydrologic conditions. Many IHMs exist, and the literature can be dense, so it is often difficult to understand what a specific model can and cannot do. We provide a review of the current core capabilities, solution techniques, communication structure with other models, some limitations, and potential future improvements of one such open-source integrated model called ParFlow.
Chandan Sarangi, Yun Qian, Karl Rittger, Kathryn J. Bormann, Ying Liu, Hailong Wang, Hui Wan, Guangxing Lin, and Thomas H. Painter
Atmos. Chem. Phys., 19, 7105–7128, https://doi.org/10.5194/acp-19-7105-2019, https://doi.org/10.5194/acp-19-7105-2019, 2019
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Radiative forcing induced by deposition of light-absorbing particles (LAPs) on snow is an important surface forcing. Here, we have used high-resolution WRF-Chem (coupled with online snow–LAP–radiation model) simulations for 2013–2014 to estimate the spatial variation in LAP-induced snow albedo darkening effect in high-mountain Asia. Significant improvement in simulated LAP–snow properties with use of a higher spatial resolution for the same model configuration is illustrated over this region.
Kai Zhang, Philip J. Rasch, Mark A. Taylor, Hui Wan, Ruby Leung, Po-Lun Ma, Jean-Christophe Golaz, Jon Wolfe, Wuyin Lin, Balwinder Singh, Susannah Burrows, Jin-Ho Yoon, Hailong Wang, Yun Qian, Qi Tang, Peter Caldwell, and Shaocheng Xie
Geosci. Model Dev., 11, 1971–1988, https://doi.org/10.5194/gmd-11-1971-2018, https://doi.org/10.5194/gmd-11-1971-2018, 2018
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The conservation of total water is an important numerical feature for global Earth system models. Even small conservation problems in the water budget can lead to systematic errors in century-long simulations for sea level rise projection. This study quantifies and reduces various sources of water conservation error in the atmosphere component of the Energy Exascale Earth System Model.
David J. Gardner, Jorge E. Guerra, François P. Hamon, Daniel R. Reynolds, Paul A. Ullrich, and Carol S. Woodward
Geosci. Model Dev., 11, 1497–1515, https://doi.org/10.5194/gmd-11-1497-2018, https://doi.org/10.5194/gmd-11-1497-2018, 2018
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As the computational power of supercomputing systems increases, and models for simulating the fluid flow of the Earth's atmosphere operate at higher resolutions, new approaches for advancing these models in time will be necessary. In order to produce the best possible result in the least amount of time, we evaluate a number of splittings, methods, and solvers on two test cases. Based on these results, we identify the most accurate and efficient approaches for consideration in production models.
Yawen Liu, Kai Zhang, Yun Qian, Yuhang Wang, Yufei Zou, Yongjia Song, Hui Wan, Xiaohong Liu, and Xiu-Qun Yang
Atmos. Chem. Phys., 18, 31–47, https://doi.org/10.5194/acp-18-31-2018, https://doi.org/10.5194/acp-18-31-2018, 2018
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Fire aerosols have large impact on weather and climate through their effect on clouds and radiation, but it is difficult to quantify. Here we investigated the short-term effective radiative forcing of fire aerosols using the nudged hindcast ensemble simulations from global aerosol-climate model. Results show large effects of fire aerosols on both liquid and ice cloud and large ensemble spread of regional mean shortwave cloud radiative forcing over southern Mexico and the central US.
Hui Wan, Kai Zhang, Philip J. Rasch, Balwinder Singh, Xingyuan Chen, and Jim Edwards
Geosci. Model Dev., 10, 537–552, https://doi.org/10.5194/gmd-10-537-2017, https://doi.org/10.5194/gmd-10-537-2017, 2017
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Solution reproductibility testing is an important task for assuring the software quality of a climate model. A new method is developed using the concept of numerical convergence with respect to temporal resolution. The method is objective, easy to implement, and computationally efficient. This paper describes the new test and demonstrates its utility in the Community Atmosphere Model version 5 (CAM5).
Kai Zhang, Chun Zhao, Hui Wan, Yun Qian, Richard C. Easter, Steven J. Ghan, Koichi Sakaguchi, and Xiaohong Liu
Geosci. Model Dev., 9, 607–632, https://doi.org/10.5194/gmd-9-607-2016, https://doi.org/10.5194/gmd-9-607-2016, 2016
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A sub-grid treatment based on Weibull distribution is introduced to CAM5 to take into account the impact of unresolved variability of surface wind speed on sea salt and dust emissions. Simulations show that sub-grid wind variability has relatively small impacts on the global mean sea salt emissions, but considerable influence on dust emissions. Dry convective eddies and mesoscale flows associated with complex topography are the major causes of dust emission enhancement.
H. Wan, P. J. Rasch, K. Zhang, Y. Qian, H. Yan, and C. Zhao
Geosci. Model Dev., 7, 1961–1977, https://doi.org/10.5194/gmd-7-1961-2014, https://doi.org/10.5194/gmd-7-1961-2014, 2014
K. Zhang, H. Wan, X. Liu, S. J. Ghan, G. J. Kooperman, P.-L. Ma, P. J. Rasch, D. Neubauer, and U. Lohmann
Atmos. Chem. Phys., 14, 8631–8645, https://doi.org/10.5194/acp-14-8631-2014, https://doi.org/10.5194/acp-14-8631-2014, 2014
H. Wan, P. J. Rasch, K. Zhang, J. Kazil, and L. R. Leung
Geosci. Model Dev., 6, 861–874, https://doi.org/10.5194/gmd-6-861-2013, https://doi.org/10.5194/gmd-6-861-2013, 2013
H. Wan, M. A. Giorgetta, G. Zängl, M. Restelli, D. Majewski, L. Bonaventura, K. Fröhlich, D. Reinert, P. Rípodas, L. Kornblueh, and J. Förstner
Geosci. Model Dev., 6, 735–763, https://doi.org/10.5194/gmd-6-735-2013, https://doi.org/10.5194/gmd-6-735-2013, 2013
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Hui Wan, Kai Zhang, Christopher J. Vogl, Carol S. Woodward, Richard C. Easter, Philip J. Rasch, Yan Feng, and Hailong Wang
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Geosci. Model Dev., 17, 1229–1247, https://doi.org/10.5194/gmd-17-1229-2024, https://doi.org/10.5194/gmd-17-1229-2024, 2024
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Geosci. Model Dev., 17, 781–794, https://doi.org/10.5194/gmd-17-781-2024, https://doi.org/10.5194/gmd-17-781-2024, 2024
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Geosci. Model Dev., 17, 335–346, https://doi.org/10.5194/gmd-17-335-2024, https://doi.org/10.5194/gmd-17-335-2024, 2024
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Boris Gailleton, Luca C. Malatesta, Guillaume Cordonnier, and Jean Braun
Geosci. Model Dev., 17, 71–90, https://doi.org/10.5194/gmd-17-71-2024, https://doi.org/10.5194/gmd-17-71-2024, 2024
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Geosci. Model Dev., 16, 7375–7409, https://doi.org/10.5194/gmd-16-7375-2023, https://doi.org/10.5194/gmd-16-7375-2023, 2023
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In geosciences, we often use simulations based on physical laws. These simulations can be computationally expensive, which is a problem if simulations must be performed many times (e.g., to add error bounds). We show how a novel machine learning method helps to reduce simulation time. In comparison to other approaches, which typically only look at the output of a simulation, the method considers physical laws in the simulation itself. The method provides reliable results faster than standard.
Carlos Spa, Otilio Rojas, and Josep de la Puente
Geosci. Model Dev., 16, 7237–7252, https://doi.org/10.5194/gmd-16-7237-2023, https://doi.org/10.5194/gmd-16-7237-2023, 2023
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This paper develops a calibration methodology of all absorbing techniques typically used by Fourier pseudo-spectral time-domain (PSTD) methods for geoacoustic wave simulations. The main contributions of the paper are (a) an implementation and quantitative comparison of all absorbing techniques available for PSTD methods through a simple and robust numerical experiment, and (b) a validation of these absorbing techniques in several 3-D seismic scenarios with gradual heterogeneity complexities.
Michael Hillier, Florian Wellmann, Eric A. de Kemp, Boyan Brodaric, Ernst Schetselaar, and Karine Bédard
Geosci. Model Dev., 16, 6987–7012, https://doi.org/10.5194/gmd-16-6987-2023, https://doi.org/10.5194/gmd-16-6987-2023, 2023
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Neural networks can be used effectively to model three-dimensional geological structures from point data, sampling geological interfaces, units, and structural orientations. Existing neural network approaches for this type of modelling are advanced by the efficient incorporation of unconformities, new knowledge inputs, and improved data fitting techniques. These advances permit the modelling of more complex geology in diverse geological settings, different-sized areas, and various data regimes.
Gianandrea Mannarini, Mario Leonardo Salinas, Lorenzo Carelli, Nicola Petacco, and Josip Orović
EGUsphere, https://doi.org/10.5194/egusphere-2023-2060, https://doi.org/10.5194/egusphere-2023-2060, 2023
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Ship weather routing has the potential to reduce CO2 emissions, but it currently lacks open and verifiable research. The Python-refactored VISIR-2 model considers currents, waves, and wind to optimise routes. The model was validated and its computational performance is now quasi-linear. VISIR-2 yields, for more than ten days in a year, two-digit savings for a ferry sailing in the Mediterranean Sea. Sailboat routes with wind and currents can be optimised as well.
Soyoung Ha, Jonathan J. Guerrette, Ivette Hernandez Banos, William C. Skamarock, and Michael G. Duda
EGUsphere, https://doi.org/10.5194/egusphere-2023-2299, https://doi.org/10.5194/egusphere-2023-2299, 2023
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To mitigate the imbalances in the initial conditions, this study introduces our recent implementation of the the incremental analysis update (IAU) in the Model for Prediction Across Scales for the Atmospheric component (MPAS-A), coupled with the Joint Effort for Data assimilation Integration (JEDI), through the cycling system. A month-long cycling run demonstrates the successful implementation of the IAU capability in the MPAS-JEDI cycling system.
Tor Nordam, Ruben Kristiansen, Raymond Nepstad, Erik van Sebille, and Andy M. Booth
Geosci. Model Dev., 16, 5339–5363, https://doi.org/10.5194/gmd-16-5339-2023, https://doi.org/10.5194/gmd-16-5339-2023, 2023
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We describe and compare two common methods, Eulerian and Lagrangian models, used to simulate the vertical transport of material in the ocean. They both solve the same transport problems but use different approaches for representing the underlying equations on the computer. The main focus of our study is on the numerical accuracy of the two approaches. Our results should be useful for other researchers creating or using these types of transport models.
Mathieu Gravey and Grégoire Mariethoz
Geosci. Model Dev., 16, 5265–5279, https://doi.org/10.5194/gmd-16-5265-2023, https://doi.org/10.5194/gmd-16-5265-2023, 2023
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Multiple‐point geostatistics are widely used to simulate complex spatial structures based on a training image. The use of these methods relies on the possibility of finding optimal training images and parametrization of the simulation algorithms. Here, we propose finding an optimal set of parameters using only the training image as input. The main advantage of our approach is to remove the risk of overfitting an objective function.
Siting Li, Ping Wang, Hong Wang, Yue Peng, Zhaodong Liu, Wenjie Zhang, Hongli Liu, Yaqiang Wang, Huizheng Che, and Xiaoye Zhang
Geosci. Model Dev., 16, 4171–4191, https://doi.org/10.5194/gmd-16-4171-2023, https://doi.org/10.5194/gmd-16-4171-2023, 2023
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Optimizing the initial state of atmospheric chemistry model input is one of the most essential methods to improve forecast accuracy. Considering the large computational load of the model, we introduce an ensemble optimal interpolation scheme (EnOI) for operational use and efficient updating of the initial fields of chemical components. The results suggest that EnOI provides a practical and cost-effective technique for improving the accuracy of chemical weather numerical forecasts.
Thomas Richter, Véronique Dansereau, Christian Lessig, and Piotr Minakowski
Geosci. Model Dev., 16, 3907–3926, https://doi.org/10.5194/gmd-16-3907-2023, https://doi.org/10.5194/gmd-16-3907-2023, 2023
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Sea ice covers not only the pole regions but affects the weather and climate globally. For example, its white surface reflects more sunlight than land. The oceans around the poles are therefore kept cool, which affects the circulation in the oceans worldwide. Simulating the behavior and changes in sea ice on a computer is, however, very difficult. We propose a new computer simulation that better models how cracks in the ice change over time and show this by comparing to other simulations.
Federica Castino, Feijia Yin, Volker Grewe, Hiroshi Yamashita, Sigrun Matthes, Simone Dietmüller, Sabine Baumann, Manuel Soler, Abolfazl Simorgh, Maximilian Mendiguchia Meuser, Florian Linke, and Benjamin Lührs
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-88, https://doi.org/10.5194/gmd-2023-88, 2023
Revised manuscript accepted for GMD
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We introduce SolFinder 1.0, a decision-making tool to select trade-offs between different objective functions, including fuel use, flight time, NOx emissions, contrail distance, and climate impact. The module is included in the AirTraf 3.0 submodel, which optimizes trajectories under weather conditions simulated by an atmospheric model (EMAC). This paper focuses on the ability of the module to identify eco-efficient trajectories, which reduce the flights climate impact at limited cost penalties.
Emma J. MacKie, Michael Field, Lijing Wang, Zhen Yin, Nathan Schoedl, Matthew Hibbs, and Allan Zhang
Geosci. Model Dev., 16, 3765–3783, https://doi.org/10.5194/gmd-16-3765-2023, https://doi.org/10.5194/gmd-16-3765-2023, 2023
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Earth scientists often have to fill in spatial gaps in measurements. This gap-filling or interpolation can be accomplished with geostatistical methods, where the statistical relationships between measurements are used to inform how these gaps should be filled. Despite the broad utility of these methods, there are few freely available geostatistical software applications. We present GStatSim, a Python package for performing different geostatistical interpolation methods.
Ian Madden, Simone Marras, and Jenny Suckale
Geosci. Model Dev., 16, 3479–3500, https://doi.org/10.5194/gmd-16-3479-2023, https://doi.org/10.5194/gmd-16-3479-2023, 2023
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To aid risk managers who may wish to rapidly assess tsunami risk but may lack high-performance computing infrastructure, we provide an accessible software package able to rapidly model tsunami inundation over real topography by leveraging Google's Tensor Processing Unit, a high-performance hardware. Minimally trained users can take advantage of the rapid modeling abilities provided by this package via a web browser thanks to the ease of use of Google Cloud Platform.
Youtong Rong, Paul Bates, and Jeffrey Neal
Geosci. Model Dev., 16, 3291–3311, https://doi.org/10.5194/gmd-16-3291-2023, https://doi.org/10.5194/gmd-16-3291-2023, 2023
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A novel subgrid channel (SGC) model is developed for river–floodplain modelling, allowing utilization of subgrid-scale bathymetric information while performing computations on relatively coarse grids. By including adaptive artificial diffusion, potential numerical instability, which the original SGC solver had, in low-friction regions such as urban areas is addressed. Evaluation of the new SGC model through structured tests confirmed that the accuracy and stability have improved.
Xiaqiong Zhou and Hann-Ming Henry Juang
Geosci. Model Dev., 16, 3263–3274, https://doi.org/10.5194/gmd-16-3263-2023, https://doi.org/10.5194/gmd-16-3263-2023, 2023
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The National Centers for Environmental Prediction Global Forecast System version 16 experienced model instability failures in real-time runs resolved by increasing the minimum thickness depth parameter. Further investigation revealed that the issue was caused by the advection of geopotential heights at the model's layer interfaces. By replacing high-order boundary conditions with zero-gradient boundary conditions for interface-wind reconstruction, the instability was effectively addressed.
Grant T. Euen, Shangxin Liu, Rene Gassmöller, Timo Heister, and Scott D. King
Geosci. Model Dev., 16, 3221–3239, https://doi.org/10.5194/gmd-16-3221-2023, https://doi.org/10.5194/gmd-16-3221-2023, 2023
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Due to the increasing availability of high-performance computing over the past few decades, numerical models have become an important tool for research. Here we test two geodynamic codes that produce such models: ASPECT, a newer code, and CitcomS, an older one. We show that they produce solutions that are extremely close. As methods and codes become more complex over time, showing reproducibility allows us to seamlessly link previously known information to modern methodologies.
Ali Dashti, Jens Carsten Grimmer, Christophe Geuzaine, Florian Bauer, and Thomas Kohl
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-105, https://doi.org/10.5194/gmd-2023-105, 2023
Revised manuscript accepted for GMD
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This study developed a new meshing workflow to enable making meshes that follow geological models. This workflow also allows us to import several geological models as input for the mesh generator and later on export the same number of watertight meshes. This way, geological uncertainty can be directly included in the numerical simulations. This study evaluates the impact of the geological uncertainty on thermohydraulic performance of the reservoir for high temperature heat storage applications.
Mohammad Kazem Sharifian, Georges Kesserwani, Alovya Ahmed Chowdhury, Jeffrey Neal, and Paul Bates
Geosci. Model Dev., 16, 2391–2413, https://doi.org/10.5194/gmd-16-2391-2023, https://doi.org/10.5194/gmd-16-2391-2023, 2023
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This paper describes a new release of the LISFLOOD-FP model for fast and efficient flood simulations. It features a new non-uniform grid generator that uses multiwavelet analyses to sensibly coarsens the resolutions where the local topographic variations are smooth. Moreover, the model is parallelised on the graphical processing units (GPUs) to further boost computational efficiency. The performance of the model is assessed for five real-world case studies, noting its potential applications.
Bruno K. Zürcher
Geosci. Model Dev., 16, 1697–1711, https://doi.org/10.5194/gmd-16-1697-2023, https://doi.org/10.5194/gmd-16-1697-2023, 2023
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We present a novel algorithm to efficiently compute Barnes interpolation, which is a method for transforming data values recorded at irregularly spaced points into a corresponding regular grid. In contrast to naive implementations with an algorithmic complexity that depends on the product of the number of sample points and the number of grid points, our approach reduces this dependency to their sum.
David H. Marsico and Paul A. Ullrich
Geosci. Model Dev., 16, 1537–1551, https://doi.org/10.5194/gmd-16-1537-2023, https://doi.org/10.5194/gmd-16-1537-2023, 2023
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Climate models involve several different components, such as the atmosphere, ocean, and land models. Information needs to be exchanged, or remapped, between these models, and devising algorithms for performing this exchange is important for ensuring the accuracy of climate simulations. In this paper, we examine the efficacy of several traditional and novel approaches to remapping on the sphere and demonstrate where our approaches offer improvement.
Moritz Liebl, Jörg Robl, Stefan Hergarten, David Lundbek Egholm, and Kurt Stüwe
Geosci. Model Dev., 16, 1315–1343, https://doi.org/10.5194/gmd-16-1315-2023, https://doi.org/10.5194/gmd-16-1315-2023, 2023
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In this study, we benchmark a topography-based model for glacier erosion (OpenLEM) with a well-established process-based model (iSOSIA). Our experiments show that large-scale erosion patterns and particularly the transformation of valley length geometry from fluvial to glacial conditions are very similar in both models. This finding enables the application of OpenLEM to study the influence of climate and tectonics on glaciated mountains with reasonable computational effort on standard PCs.
James Kent, Thomas Melvin, and Golo Albert Wimmer
Geosci. Model Dev., 16, 1265–1276, https://doi.org/10.5194/gmd-16-1265-2023, https://doi.org/10.5194/gmd-16-1265-2023, 2023
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This paper introduces the Met Office's new shallow water model. The shallow water model is a building block towards the Met Office's new atmospheric dynamical core. The shallow water model is tested on a number of standard spherical shallow water test cases, including flow over mountains and unstable jets. Results show that the model produces similar results to other shallow water models in the literature.
Anthony Gruber, Max Gunzburger, Lili Ju, Rihui Lan, and Zhu Wang
Geosci. Model Dev., 16, 1213–1229, https://doi.org/10.5194/gmd-16-1213-2023, https://doi.org/10.5194/gmd-16-1213-2023, 2023
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This work applies a novel technical tool, multifidelity Monte Carlo (MFMC) estimation, to three climate-related benchmark experiments involving oceanic, atmospheric, and glacial modeling. By considering useful quantities such as maximum sea height and total (kinetic) energy, we show that MFMC leads to predictions which are more accurate and less costly than those obtained by standard methods. This suggests MFMC as a potential drop-in replacement for estimation in realistic climate models.
Piyoosh Jaysaval, Glenn E. Hammond, and Timothy C. Johnson
Geosci. Model Dev., 16, 961–976, https://doi.org/10.5194/gmd-16-961-2023, https://doi.org/10.5194/gmd-16-961-2023, 2023
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We present a robust and highly scalable implementation of numerical forward modeling and inversion algorithms for geophysical electrical resistivity tomography data. The implementation is publicly available and developed within the framework of PFLOTRAN (http://www.pflotran.org), an open-source, state-of-the-art massively parallel subsurface flow and transport simulation code. The paper details all the theoretical and implementation aspects of the new capabilities along with test examples.
Lucas Schauer, Michael J. Schmidt, Nicholas B. Engdahl, Stephen D. Pankavich, David A. Benson, and Diogo Bolster
Geosci. Model Dev., 16, 833–849, https://doi.org/10.5194/gmd-16-833-2023, https://doi.org/10.5194/gmd-16-833-2023, 2023
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We develop a multi-dimensional, parallelized domain decomposition strategy for mass-transfer particle tracking methods in two and three dimensions, investigate different procedures for decomposing the domain, and prescribe an optimal tiling based on physical problem parameters and the number of available CPU cores. For an optimally subdivided diffusion problem, the parallelized algorithm achieves nearly perfect linear speedup in comparison with the serial run-up to thousands of cores.
John Mern and Jef Caers
Geosci. Model Dev., 16, 289–313, https://doi.org/10.5194/gmd-16-289-2023, https://doi.org/10.5194/gmd-16-289-2023, 2023
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In this work, we formulate the sequential geoscientific data acquisition problem as a problem that is similar to playing chess against nature, except the pieces are not fully observed. Solutions to these problems are given in AI and rarely used in geoscientific data planning. We illustrate our approach to a simple 2D problem of mineral exploration.
Jevgenijs Steinbuks, Yongyang Cai, Jonas Jaegermeyr, and Thomas W. Hertel
EGUsphere, https://doi.org/10.5194/egusphere-2022-863, https://doi.org/10.5194/egusphere-2022-863, 2023
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This paper applies cutting-edge numerical methods to show how uncertain climate change and technological progress affect the future utilization of the scarce world's land resources. The paper's key insight is to illustrate how much global cropland will expand when future crop yields are unknown. The more uncertain the future crop yields are, the more forest conversion will be necessary to sustain human welfare. Some of that conversion takes place even when crop yields are not actually affected.
Ziqi Gao, Yifeng Wang, Petros Vasilakos, Cesunica E. Ivey, Khanh Do, and Armistead G. Russell
Geosci. Model Dev., 15, 9015–9029, https://doi.org/10.5194/gmd-15-9015-2022, https://doi.org/10.5194/gmd-15-9015-2022, 2022
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While the national ambient air quality standard of ozone is based on the 3-year average of the fourth highest 8 h maximum (MDA8) ozone concentrations, these predicted extreme values using numerical methods are always biased low. We built four computational models (GAM, MARS, random forest and SVR) to predict the fourth highest MDA8 ozone in Southern California using precursor emissions, meteorology and climatological patterns. All models presented acceptable performance, with GAM being the best.
Zhihao Wang, Jason Goetz, and Alexander Brenning
Geosci. Model Dev., 15, 8765–8784, https://doi.org/10.5194/gmd-15-8765-2022, https://doi.org/10.5194/gmd-15-8765-2022, 2022
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A lack of inventory data can be a limiting factor in developing landslide predictive models, which are crucial for supporting hazard policy and decision-making. We show how case-based reasoning and domain adaptation (transfer-learning techniques) can effectively retrieve similar landslide modeling situations for prediction in new data-scarce areas. Using cases in Italy, Austria, and Ecuador, our findings support the application of transfer learning for areas that require rapid model development.
Till Sachau, Haibin Yang, Justin Lang, Paul D. Bons, and Louis Moresi
Geosci. Model Dev., 15, 8749–8764, https://doi.org/10.5194/gmd-15-8749-2022, https://doi.org/10.5194/gmd-15-8749-2022, 2022
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Knowledge of the internal structures of the major continental ice sheets is improving, thanks to new investigative techniques. These structures are an essential indication of the flow behavior and dynamics of ice transport, which in turn is important for understanding the actual impact of the vast amounts of water trapped in continental ice sheets on global sea-level rise. The software studied here is specifically designed to simulate such structures and their evolution.
Keith J. Roberts, Alexandre Olender, Lucas Franceschini, Robert C. Kirby, Rafael S. Gioria, and Bruno S. Carmo
Geosci. Model Dev., 15, 8639–8667, https://doi.org/10.5194/gmd-15-8639-2022, https://doi.org/10.5194/gmd-15-8639-2022, 2022
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Finite-element methods (FEMs) permit the use of more flexible unstructured meshes but are rarely used in full waveform inversions (FWIs), an iterative process that reconstructs velocity models of earth’s subsurface, due to computational and memory storage costs. To reduce those costs, novel software is presented allowing the use of high-order mass-lumped FEMs on triangular meshes, together with a material-property mesh-adaptation performance-enhancing strategy, enabling its use in FWIs.
Konstantinos Papadakis, Yann Pfau-Kempf, Urs Ganse, Markus Battarbee, Markku Alho, Maxime Grandin, Maxime Dubart, Lucile Turc, Hongyang Zhou, Konstantinos Horaites, Ivan Zaitsev, Giulia Cozzani, Maarja Bussov, Evgeny Gordeev, Fasil Tesema, Harriet George, Jonas Suni, Vertti Tarvus, and Minna Palmroth
Geosci. Model Dev., 15, 7903–7912, https://doi.org/10.5194/gmd-15-7903-2022, https://doi.org/10.5194/gmd-15-7903-2022, 2022
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Vlasiator is a plasma simulation code that simulates the entire near-Earth space at a global scale. As 6D simulations require enormous amounts of computational resources, Vlasiator uses adaptive mesh refinement (AMR) to lighten the computational burden. However, due to Vlasiator’s grid topology, AMR simulations suffer from grid aliasing artifacts that affect the global results. In this work, we present and evaluate the performance of a mechanism for alleviating those artifacts.
Artur Safin, Damien Bouffard, Firat Ozdemir, Cintia L. Ramón, James Runnalls, Fotis Georgatos, Camille Minaudo, and Jonas Šukys
Geosci. Model Dev., 15, 7715–7730, https://doi.org/10.5194/gmd-15-7715-2022, https://doi.org/10.5194/gmd-15-7715-2022, 2022
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Reconciling the differences between numerical model predictions and observational data is always a challenge. In this paper, we investigate the viability of a novel approach to the calibration of a three-dimensional hydrodynamic model of Lake Geneva, where the target parameters are inferred in terms of distributions. We employ a filtering technique that generates physically consistent model trajectories and implement a neural network to enable bulk-to-skin temperature conversion.
Colin Grudzien and Marc Bocquet
Geosci. Model Dev., 15, 7641–7681, https://doi.org/10.5194/gmd-15-7641-2022, https://doi.org/10.5194/gmd-15-7641-2022, 2022
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Iterative optimization techniques, the state of the art in data assimilation, have largely focused on extending forecast accuracy to moderate- to long-range forecast systems. However, current methodology may not be cost-effective in reducing forecast errors in online, short-range forecast systems. We propose a novel optimization of these techniques for online, short-range forecast cycles, simultaneously providing an improvement in forecast accuracy and a reduction in the computational cost.
Yangyang Yu, Shaoqing Zhang, Haohuan Fu, Lixin Wu, Dexun Chen, Yang Gao, Zhiqiang Wei, Dongning Jia, and Xiaopei Lin
Geosci. Model Dev., 15, 6695–6708, https://doi.org/10.5194/gmd-15-6695-2022, https://doi.org/10.5194/gmd-15-6695-2022, 2022
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To understand the scientific consequence of perturbations caused by slave cores in heterogeneous computing environments, we examine the influence of perturbation amplitudes on the determination of the cloud bottom and cloud top and compute the probability density function (PDF) of generated clouds. A series of comparisons of the PDFs between homogeneous and heterogeneous systems show consistently acceptable error tolerances when using slave cores in heterogeneous computing environments.
Vijay S. Mahadevan, Jorge E. Guerra, Xiangmin Jiao, Paul Kuberry, Yipeng Li, Paul Ullrich, David Marsico, Robert Jacob, Pavel Bochev, and Philip Jones
Geosci. Model Dev., 15, 6601–6635, https://doi.org/10.5194/gmd-15-6601-2022, https://doi.org/10.5194/gmd-15-6601-2022, 2022
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Coupled Earth system models require transfer of field data between multiple components with varying spatial resolutions to determine the correct climate behavior. We present the Metrics for Intercomparison of Remapping Algorithms (MIRA) protocol to evaluate the accuracy, conservation properties, monotonicity, and local feature preservation of four different remapper algorithms for various unstructured mesh problems of interest. Future extensions to more practical use cases are also discussed.
Cited articles
Barrett, A. I., Wellmann, C., Seifert, A., Hoose, C., Vogel, B., and Kunz, M.: One Step at a Time: How Model Time Step Significantly Affects Convection-Permitting Simulations, J. Adv. Model. Earth Syst., 11, 641–658, https://doi.org/10.1029/2018MS001418, 2019. a
Caya, A., Laprise, R., and Zwack, P.: Consequences of Using the Splitting Method for Implementing Physical Forcings in a Semi-Implicit Semi-Lagrangian Model, Mon. Weather Rev., 126, 1707–1713, https://doi.org/10.1175/1520-0493(1998)126<1707:COUTSM>2.0.CO;2, 1998. a
Donahue, A. S. and Caldwell, P. M.: Performance and Accuracy Implications of Parallel Split Physics-Dynamics Coupling in the Energy Exascale Earth System Atmosphere Model, J. Adv. Model. Earth Sy., 12, e2020MS002080, https://doi.org/10.1029/2020MS002080, 2020. a
Dubal, M., Wood, N., and Staniforth, A.: Analysis of Parallel versus Sequential Splittings for Time-Stepping Physical Parameterizations, Mon. Weather Rev., 132, 121–132, https://doi.org/10.1175/1520-0493(2004)131<0121:AOPVSS>2.0.CO;2, 2004. a
Dubal, M., Wood, N., and Staniforth, A.: Mixed Parallel-Sequential-Split Schemes for Time-Stepping Multiple Physical Parameterizations, Mon. Weather Rev., 133, 989–1002, https://doi.org/10.1175/MWR2893.1, 2005. a
Dubal, M., Wood, N., and Staniforth, A.: Some numerical properties of approaches to physics-dynamics coupling for NWP, Q. J. Roy. Meteorol. Soc., 132, 27–42, https://doi.org/10.1256/qj.05.49, 2006. a
Feng, Y., Wang, H., Rasch, P. J., Zhang, K., Lin, W., Tang, Q., Xie, S., Hamilton, D. S., Mahowald, N., and Yu, H.: Global Dust Cycle and Direct Radiative Effect in E3SM Version 1: Impact of Increasing Model Resolution, J. Adv. Model. Earth Sy., 14, e2021MS002909, https://doi.org/10.1029/2021MS002909, 2022. a, b, c
Gross, M., Wan, H., Rasch, P. J., Caldwell, P. M., Williamson, D. L., Klocke, D., Jablonowski, C., Thatcher, D. R., Wood, N., Cullen, M., Beare, B., Willett, M., Lemarié, F., Blayo, E., Malardel, S., Termonia, P., Gassmann, A., Lauritzen, P. H., Johansen, H., Zarzycki, C., Sakaguchi, K., and Leung, R.: Physics–Dynamics Coupling in Weather, Climate, and Earth System Models: Challenges and Recent Progress, Mon. Weather Rev., 146, 3505–3544, https://doi.org/10.1175/MWR-D-17-0345.1, 2018. a, b
Hairer, E., Wanner, G., and Lubich, C.: Numerical Integrators, Springer Berlin Heidelberg, Berlin, Heidelberg, 27–50, https://doi.org/10.1007/3-540-30666-8_2, 2006. a
Heinzeller, D., Bernardet, L., Firl, G., Zhang, M., Sun, X., and Ek, M.: The Common Community Physics Package (CCPP) Framework v6, Geosci. Model Dev., 16, 2235–2259, https://doi.org/10.5194/gmd-16-2235-2023, 2023. a
Keyes, D. E., McInnes, L. C., Woodward, C., et al.: Multiphysics simulations: Challenges and opportunities, Int. J. High Perform. C., 27, 4–83, https://doi.org/10.1177/1094342012468181, 2013. a
LeVeque, R. J.: Time-split methods for partial differential equations, PhD thesis, Stanford University, https://apps.dtic.mil/sti/pdfs/ADA119417.pdf (last access: 12 February 2024), 1982. a
Rasch, P. J., Xie, S., Ma, P.-L., Lin, W., Wang, H., Tang, Q., Burrows, S. M., Caldwell, P., Zhang, K., Easter, R. C., Cameron-Smith, P., Singh, B., Wan, H., Golaz, J.-C., Harrop, B. E., Roesler, E., Bacmeister, J., Larson, V. E., Evans, K. J., Qian, Y., Taylor, M., Leung, L. R., Zhang, Y., Brent, L., Branstetter, M., Hannay, C., Mahajan, S., Mametjanov, A., Neale, R., Richter, J. H., Yoon, J.-H., Zender, C. S., Bader, D., Flanner, M., Foucar, J. G., Jacob, R., Keen, N., Klein, S. A., Liu, X., Salinger, A., Shrivastava, M., and Yang, Y.: An Overview of the Atmospheric Component of the Energy Exascale Earth System Model, J. Adv. Model. Earth Sy., 11, 2377–2411, https://doi.org/10.1029/2019MS001629, 2019. a
Santos, S. P., Caldwell, P. M., and Bretherton, C. S.: Cloud Process Coupling and Time Integration in the E3SM Atmosphere Model, J. Adv. Model. Earth Sy., 13, e2020MS002359, https://doi.org/10.1029/2020MS002359, 2021. a, b
Staniforth, A., Wood, N., and Côté, J.: Analysis of the numerics of physics-dynamics coupling, Q. J. Roy. Meteor. Soc., 128, 2779–2799, https://doi.org/10.1256/qj.02.25, 2002. a
Ubbiali, S., Schär, C., Schlemmer, L., and Schulthess, T. C.: A Numerical Analysis of Six Physics-Dynamics Coupling Schemes for Atmospheric Models, J. Adv. Model. Earth Sy., 13, e2020MS002377, https://doi.org/10.1029/2020MS002377, 2021. a, b, c
Wan, H.: EAMv1 code with revised aerosol process coupling (tag v1_cflx_2021), Zenodo [code], https://doi.org/10.5281/zenodo.7995850, 2023. a
Wan, H. and Zhang, K.: Compressed EAMv1 simulation output for evaluating two aerosol process coupling schemes, Zenodo [data set], https://doi.org/10.5281/zenodo.10407375, 2023. a
Wan, H., Rasch, P. J., Zhang, K., Kazil, J., and Leung, L. R.: Numerical issues associated with compensating and competing processes in climate models: an example from ECHAM-HAM, Geosci. Model Dev., 6, 861–874, https://doi.org/10.5194/gmd-6-861-2013, 2013. a
Wan, H., Zhang, S., Rasch, P. J., Larson, V. E., Zeng, X., and Yan, H.: Quantifying and attributing time step sensitivities in present-day climate simulations conducted with EAMv1, Geosci. Model Dev., 14, 1921–1948, https://doi.org/10.5194/gmd-14-1921-2021, 2021. a, b
Wan, H., Zhang, K., Rasch, P. J., Larson, V. E., Zeng, X., Zhang, S., and Dixon, R.: CondiDiag1.0: a flexible online diagnostic tool for conditional sampling and budget analysis in the E3SM atmosphere model (EAM), Geosci. Model Dev., 15, 3205–3231, https://doi.org/10.5194/gmd-15-3205-2022, 2022. a
Wan, H., Zhang, K., Vogl, C. J., Woodward, C. S., Easter, R. C., Rasch, P. J., Feng, Y., and Wang, H.: Numerical coupling of aerosol emissions, dry removal, and turbulent mixing in the E3SM Atmosphere Model version 1 (EAMv1) – Part 1: Dust budget analyses and the impacts of a revised coupling scheme, Geosci. Model Dev., 17, 1387–1407, https://doi.org/10.5194/gmd-17-1387-2024, 2024. a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s, t, u
Williamson, D. L.: The effect of time steps and time-scales on parametrization suites, Q. J. Roy. Meteor. Soc., 139, 548–560, https://doi.org/10.1002/qj.1992, 2013. a, b
Zhou, L. and Harris, L.: Integrated Dynamics-Physics Coupling for Weather to Climate Models: GFDL SHiELD With In-Line Microphysics, Geophys. Res. Lett., 49, e2022GL100519, https://doi.org/10.1029/2022GL100519, 2022. a
Short summary
Generally speaking, accurate climate simulation requires an accurate evolution of the underlying mathematical equations on large computers. The equations are typically formulated and evolved in process groups. Process coupling refers to how the evolution of each group is combined with that of other groups to evolve the full set of equations for the whole atmosphere. This work presents a mathematical framework to evaluate methods without the need to first implement the methods.
Generally speaking, accurate climate simulation requires an accurate evolution of the underlying...
