Articles | Volume 12, issue 4
https://doi.org/10.5194/gmd-12-1525-2019
© Author(s) 2019. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-12-1525-2019
© Author(s) 2019. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Methods for assessment of models
| 
18 Apr 2019
Methods for assessment of models |
| 18 Apr 2019
| 18 Apr 2019
Scalable diagnostics for global atmospheric chemistry using Ristretto library (version 1.0)
Meghana Velegar
Department of Applied Mathematics, University of Washington, Seattle, WA 98195, USA
N. Benjamin Erichson
Department of Applied Mathematics, University of Washington, Seattle, WA 98195, USA
Christoph A. Keller
NASA Global Modeling and Assimilation Office, Goddard Space Flight Center, Greenbelt,
MD 20771, USA
Universities Space Research Association, Columbia, MD 21046, USA
J. Nathan Kutz
CORRESPONDING AUTHOR
Department of Applied Mathematics, University of Washington, Seattle, WA 98195, USA
Related authors
No articles found.
Meghana Velagar, Christoph Keller, and J. Nathan Kutz
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-77, https://doi.org/10.5194/gmd-2024-77, 2024
Preprint under review for GMD
Short summary
Short summary
We develop the data-driven method of dynamic mode decomposition for producing a robust and stable surrogate reduced order model of atmospheric chemistry dynamics. The model is computationally efficient, provides interpretable patterns of activity and produces uncertainty quantification metrics. It is ideal for forecasting of atmospheric chemistry in a computationally tractable manner.
Hongyu Liu, Bo Zhang, Richard H. Moore, Luke D. Ziemba, Richard A. Ferrare, Hyundeok Choi, Armin Sorooshian, David Painemal, Hailong Wang, Michael A. Shook, Amy Jo Scarino, Johnathan W. Hair, Ewan C. Crosbie, Marta A. Fenn, Taylor J. Shingler, Chris A. Hostetler, Gao Chen, Mary M. Kleb, Gan Luo, Fangqun Yu, Jason L. Tackett, Mark A. Vaughan, Yongxiang Hu, Glenn S. Diskin, John B. Nowak, Joshua P. DiGangi, Yonghoon Choi, Christoph A. Keller, and Matthew S. Johnson
EGUsphere, https://doi.org/10.5194/egusphere-2024-1127, https://doi.org/10.5194/egusphere-2024-1127, 2024
Short summary
Short summary
We use the GEOS-Chem model to simulate aerosols over the western North Atlantic Ocean (WNAO) during the winter and summer campaigns of ACTIVATE 2020. Model results are evaluated against in situ and remote sensing measurements from two aircraft as well as ground-based and satellite observations. The improved understanding of the aerosol life cycle, composition, transport pathways, and distribution has important implications for characterizing aerosol-cloud-meteorology interactions over the WNAO.
Randall V. Martin, Sebastian D. Eastham, Liam Bindle, Elizabeth W. Lundgren, Thomas L. Clune, Christoph A. Keller, William Downs, Dandan Zhang, Robert A. Lucchesi, Melissa P. Sulprizio, Robert M. Yantosca, Yanshun Li, Lucas Estrada, William M. Putman, Benjamin M. Auer, Atanas L. Trayanov, Steven Pawson, and Daniel J. Jacob
Geosci. Model Dev., 15, 8731–8748, https://doi.org/10.5194/gmd-15-8731-2022, https://doi.org/10.5194/gmd-15-8731-2022, 2022
Short summary
Short summary
Atmospheric chemistry models must be able to operate both online as components of Earth system models and offline as standalone models. The widely used GEOS-Chem model operates both online and offline, but the classic offline version is not suitable for massively parallel simulations. We describe a new generation of the offline high-performance GEOS-Chem (GCHP) that enables high-resolution simulations on thousands of cores, including on the cloud, with improved access, performance, and accuracy.
Liam Bindle, Randall V. Martin, Matthew J. Cooper, Elizabeth W. Lundgren, Sebastian D. Eastham, Benjamin M. Auer, Thomas L. Clune, Hongjian Weng, Jintai Lin, Lee T. Murray, Jun Meng, Christoph A. Keller, William M. Putman, Steven Pawson, and Daniel J. Jacob
Geosci. Model Dev., 14, 5977–5997, https://doi.org/10.5194/gmd-14-5977-2021, https://doi.org/10.5194/gmd-14-5977-2021, 2021
Short summary
Short summary
Atmospheric chemistry models like GEOS-Chem are versatile tools widely used in air pollution and climate studies. The simulations used in such studies can be very computationally demanding, and thus it is useful if the model can simulate a specific geographic region at a higher resolution than the rest of the globe. Here, we implement, test, and demonstrate a new variable-resolution capability in GEOS-Chem that is suitable for simulations conducted on supercomputers.
Haipeng Lin, Daniel J. Jacob, Elizabeth W. Lundgren, Melissa P. Sulprizio, Christoph A. Keller, Thibaud M. Fritz, Sebastian D. Eastham, Louisa K. Emmons, Patrick C. Campbell, Barry Baker, Rick D. Saylor, and Raffaele Montuoro
Geosci. Model Dev., 14, 5487–5506, https://doi.org/10.5194/gmd-14-5487-2021, https://doi.org/10.5194/gmd-14-5487-2021, 2021
Short summary
Short summary
Emissions are a central component of atmospheric chemistry models. The Harmonized Emissions Component (HEMCO) is a software component for computing emissions from a user-selected ensemble of emission inventories and algorithms. It allows users to select, add, and scale emissions from different sources through a configuration file with no change to the model source code. We demonstrate the implementation of HEMCO in several models, all sharing the same HEMCO core code and database library.
Christoph A. Keller, Mathew J. Evans, K. Emma Knowland, Christa A. Hasenkopf, Sruti Modekurty, Robert A. Lucchesi, Tomohiro Oda, Bruno B. Franca, Felipe C. Mandarino, M. Valeria Díaz Suárez, Robert G. Ryan, Luke H. Fakes, and Steven Pawson
Atmos. Chem. Phys., 21, 3555–3592, https://doi.org/10.5194/acp-21-3555-2021, https://doi.org/10.5194/acp-21-3555-2021, 2021
Short summary
Short summary
This study combines surface observations and model simulations to quantify the impact of COVID-19 restrictions on air quality across the world. The presented methodology removes the confounding impacts of meteorology on air pollution. Our results indicate that surface concentrations of nitrogen dioxide, an important air pollutant emitted during the combustion of fossil fuels, declined by up to 60 % following the implementation of COVID-19 containment measures.
Sarah A. Strode, James S. Wang, Michael Manyin, Bryan Duncan, Ryan Hossaini, Christoph A. Keller, Sylvia E. Michel, and James W. C. White
Atmos. Chem. Phys., 20, 8405–8419, https://doi.org/10.5194/acp-20-8405-2020, https://doi.org/10.5194/acp-20-8405-2020, 2020
Short summary
Short summary
The 13C : 12C isotopic ratio in methane (CH4) provides information about CH4 sources, but loss of CH4 by reaction with OH and chlorine (Cl) also affects this ratio. Tropospheric Cl provides a small and uncertain sink for CH4 but has a large effect on its isotopic ratio. We use the GEOS model with several different Cl fields to test the sensitivity of methane's isotopic composition to tropospheric Cl. Cl affects the global mean, hemispheric gradient, and seasonal cycle of the isotopic ratio.
Haipeng Lin, Xu Feng, Tzung-May Fu, Heng Tian, Yaping Ma, Lijuan Zhang, Daniel J. Jacob, Robert M. Yantosca, Melissa P. Sulprizio, Elizabeth W. Lundgren, Jiawei Zhuang, Qiang Zhang, Xiao Lu, Lin Zhang, Lu Shen, Jianping Guo, Sebastian D. Eastham, and Christoph A. Keller
Geosci. Model Dev., 13, 3241–3265, https://doi.org/10.5194/gmd-13-3241-2020, https://doi.org/10.5194/gmd-13-3241-2020, 2020
Short summary
Short summary
Online coupling of meteorology and chemistry models often presents maintenance issues with hard-wired coding. We present WRF-GC, an one-way online coupling of the WRF meteorological model and GEOS-Chem atmospheric chemistry model for regional atmospheric chemistry and air quality modeling. Our coupling structure allows future versions of either parent model to be immediately integrated into WRF-GC. The WRF-GC model was able to well reproduce regional PM2.5 with greater computational efficiency.
Christoph A. Keller and Mat J. Evans
Geosci. Model Dev., 12, 1209–1225, https://doi.org/10.5194/gmd-12-1209-2019, https://doi.org/10.5194/gmd-12-1209-2019, 2019
Short summary
Short summary
Computer simulations of atmospheric chemistry are a central tool to study the impact of air pollutants on the environment. These models are highly complex and require a lot of computing resources. In this study we show that machine learning can be used to predict air pollution with an accuracy that is comparable to the traditional, computationally expensive method. Such a machine-learning-based model has the potential to be orders of magnitude faster.
Kai-Lan Chang, Owen R. Cooper, J. Jason West, Marc L. Serre, Martin G. Schultz, Meiyun Lin, Virginie Marécal, Béatrice Josse, Makoto Deushi, Kengo Sudo, Junhua Liu, and Christoph A. Keller
Geosci. Model Dev., 12, 955–978, https://doi.org/10.5194/gmd-12-955-2019, https://doi.org/10.5194/gmd-12-955-2019, 2019
Short summary
Short summary
We developed a new method for combining surface ozone observations from thousands of monitoring sites worldwide with the output from multiple atmospheric chemistry models. The result is a global surface ozone distribution with greater accuracy than any single model can achieve. We focused on an ozone metric relevant to human mortality caused by long-term ozone exposure. Our method can be applied to studies that quantify the impacts of ozone on human health and mortality.
Lu Hu, Christoph A. Keller, Michael S. Long, Tomás Sherwen, Benjamin Auer, Arlindo Da Silva, Jon E. Nielsen, Steven Pawson, Matthew A. Thompson, Atanas L. Trayanov, Katherine R. Travis, Stuart K. Grange, Mat J. Evans, and Daniel J. Jacob
Geosci. Model Dev., 11, 4603–4620, https://doi.org/10.5194/gmd-11-4603-2018, https://doi.org/10.5194/gmd-11-4603-2018, 2018
Short summary
Short summary
We present a full-year online global simulation of tropospheric chemistry at 12.5 km resolution. To the best of our knowledge, such a resolution in a state-of-the-science global simulation of tropospheric chemistry is unprecedented. This simulation will serve as the Nature Run for observing system simulation experiments to support the future geostationary satellite constellation for tropospheric chemistry, and can also be used for various air quality applications.
Sebastian D. Eastham, Michael S. Long, Christoph A. Keller, Elizabeth Lundgren, Robert M. Yantosca, Jiawei Zhuang, Chi Li, Colin J. Lee, Matthew Yannetti, Benjamin M. Auer, Thomas L. Clune, Jules Kouatchou, William M. Putman, Matthew A. Thompson, Atanas L. Trayanov, Andrea M. Molod, Randall V. Martin, and Daniel J. Jacob
Geosci. Model Dev., 11, 2941–2953, https://doi.org/10.5194/gmd-11-2941-2018, https://doi.org/10.5194/gmd-11-2941-2018, 2018
Short summary
Short summary
Global atmospheric chemical transport models are crucial tools in atmospheric science, used to address problems ranging from climate change to acid rain. GEOS-Chem High Performance (GCHP) is a new implementation of the widely used GEOS-Chem model, designed for massively parallel architectures. GCHP v11-02c is shown to be highly scalable from 6 to over 500 cores, enabling the routine simulation of global atmospheric chemistry from the surface to the stratopause at resolutions of ~50 km or finer.
Karen Yu, Christoph A. Keller, Daniel J. Jacob, Andrea M. Molod, Sebastian D. Eastham, and Michael S. Long
Geosci. Model Dev., 11, 305–319, https://doi.org/10.5194/gmd-11-305-2018, https://doi.org/10.5194/gmd-11-305-2018, 2018
Short summary
Short summary
Global simulations of atmospheric chemistry are generally conducted with off-line chemical transport models (CTMs) driven by archived meteorological data from general circulation models (GCMs). The off-line approach has the advantages of simplicity and expediency, but it is unable to reproduce the GCM transport exactly. We investigate the cascade of errors associated with the off-line approach using the GEOS-5 GCM and GEOS-Chem CTM and discuss improvements in the use of archived meteorology.
Katherine R. Travis, Daniel J. Jacob, Christoph A. Keller, Shi Kuang, Jintai Lin, Michael J. Newchurch, and Anne M. Thompson
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2017-596, https://doi.org/10.5194/acp-2017-596, 2017
Preprint retracted
Short summary
Short summary
Models severely overestimate surface ozone in the Southeast US during summertime which has implications for the design of air quality regulations. We use a model (GEOS-Chem) to interpret ozone observations from a suite of observations taken during August–September 2013. The model is unbiased relative to observations below 1 km but is biased high at the surface. We attribute this bias to model representation error, an underestimate in low-cloud, and insufficient treatment of vertical mixing.
Related subject area
Atmospheric sciences
Valid time shifting ensemble Kalman filter (VTS-EnKF) for dust storm forecasting
An updated parameterization of the unstable atmospheric surface layer in the Weather Research and Forecasting (WRF) modeling system
The impact of cloud microphysics and ice nucleation on Southern Ocean clouds assessed with single-column modeling and instrument simulators
An updated aerosol simulation in the Community Earth System Model (v2.1.3): dust and marine aerosol emissions and secondary organic aerosol formation
Exploring ship track spreading rates with a physics-informed Langevin particle parameterization
Do data-driven models beat numerical models in forecasting weather extremes? A comparison of IFS HRES, Pangu-Weather, and GraphCast
Development of the MPAS-CMAQ coupled system (V1.0) for multiscale global air quality modeling
Assessment of object-based indices to identify convective organization
The Global Forest Fire Emissions Prediction System version 1.0
NEIVAv1.0: Next-generation Emissions InVentory expansion of Akagi et al. (2011) version 1.0
FLEXPART version 11: improved accuracy, efficiency, and flexibility
Challenges of high-fidelity air quality modeling in urban environments – PALM sensitivity study during stable conditions
Air quality modeling intercomparison and multiscale ensemble chain for Latin America
Recommended coupling to global meteorological fields for long-term tracer simulations with WRF-GHG
Selecting CMIP6 global climate models (GCMs) for Coordinated Regional Climate Downscaling Experiment (CORDEX) dynamical downscaling over Southeast Asia using a standardised benchmarking framework
Improved definition of prior uncertainties in CO2 and CO fossil fuel fluxes and its impact on multi-species inversion with GEOS-Chem (v12.5)
RASCAL v1.0: an open-source tool for climatological time series reconstruction and extension
Introducing graupel density prediction in Weather Research and Forecasting (WRF) double-moment 6-class (WDM6) microphysics and evaluation of the modified scheme during the ICE-POP field campaign
Enabling high-performance cloud computing for the Community Multiscale Air Quality Model (CMAQ) version 5.3.3: performance evaluation and benefits for the user community
Atmospheric-river-induced precipitation in California as simulated by the regionally refined Simple Convective Resolving E3SM Atmosphere Model (SCREAM) Version 0
Recent improvements and maximum covariance analysis of aerosol and cloud properties in the EC-Earth3-AerChem model
GPU-HADVPPM4HIP V1.0: using the heterogeneous-compute interface for portability (HIP) to speed up the piecewise parabolic method in the CAMx (v6.10) air quality model on China's domestic GPU-like accelerator
Preliminary evaluation of the effect of electro-coalescence with conducting sphere approximation on the formation of warm cumulus clouds using SCALE-SDM version 0.2.5–2.3.0
Exploring the footprint representation of microwave radiance observations in an Arctic limited-area data assimilation system
Orbital-Radar v1.0.0: A tool to transform suborbital radar observations to synthetic EarthCARE cloud radar data
Analysis of model error in forecast errors of extended atmospheric Lorenz 05 systems and the ECMWF system
Description and validation of Vehicular Emissions from Road Traffic (VERT) 1.0, an R-based framework for estimating road transport emissions from traffic flows
AeroMix v1.0.1: a Python package for modeling aerosol optical properties and mixing states
Impact of ITCZ width on global climate: ITCZ-MIP
Deep-learning-driven simulations of boundary layer clouds over the Southern Great Plains
Mixed-precision computing in the GRIST dynamical core for weather and climate modelling
A conservative immersed boundary method for the multi-physics urban large-eddy simulation model uDALES v2.0
RCEMIP-II: mock-Walker simulations as phase II of the radiative–convective equilibrium model intercomparison project
Objective identification of meteorological fronts and climatologies from ERA-Interim and ERA5
TAMS: a tracking, classifying, and variable-assigning algorithm for mesoscale convective systems in simulated and satellite-derived datasets
Development of the adjoint of the unified tropospheric–stratospheric chemistry extension (UCX) in GEOS-Chem adjoint v36
New explicit formulae for the settling speed of prolate spheroids in the atmosphere: theoretical background and implementation in AerSett v2.0.2
ZJU-AERO V0.5: an Accurate and Efficient Radar Operator designed for CMA-GFS/MESO with the capability to simulate non-spherical hydrometeors
The Year of Polar Prediction site Model Intercomparison Project (YOPPsiteMIP) phase 1: project overview and Arctic winter forecast evaluation
Evaluating CHASER V4.0 global formaldehyde (HCHO) simulations using satellite, aircraft, and ground-based remote-sensing observations
Global variable-resolution simulations of extreme precipitation over Henan, China, in 2021 with MPAS-Atmosphere v7.3
The CHIMERE chemistry-transport model v2023r1
tobac v1.5: introducing fast 3D tracking, splits and mergers, and other enhancements for identifying and analysing meteorological phenomena
Merged Observatory Data Files (MODFs): an integrated observational data product supporting process-oriented investigations and diagnostics
Simulation of marine stratocumulus using the super-droplet method: numerical convergence and comparison to a double-moment bulk scheme using SCALE-SDM 5.2.6-2.3.1
Modeling of PAHs From Global to Regional Scales: Model Development and Investigation of Health Risks from 2013 to 2018 in China
WRF-Comfort: simulating microscale variability in outdoor heat stress at the city scale with a mesoscale model
Representing effects of surface heterogeneity in a multi-plume eddy diffusivity mass flux boundary layer parameterization
Can TROPOMI NO2 satellite data be used to track the drop in and resurgence of NOx emissions in Germany between 2019–2021 using the multi-source plume method (MSPM)?
A spatiotemporally separated framework for reconstructing the sources of atmospheric radionuclide releases
Mijie Pang, Jianbing Jin, Arjo Segers, Huiya Jiang, Wei Han, Batjargal Buyantogtokh, Ji Xia, Li Fang, Jiandong Li, Hai Xiang Lin, and Hong Liao
Geosci. Model Dev., 17, 8223–8242, https://doi.org/10.5194/gmd-17-8223-2024, https://doi.org/10.5194/gmd-17-8223-2024, 2024
Short summary
Short summary
The ensemble Kalman filter (EnKF) improves dust storm forecasts but faces challenges with position errors. The valid time shifting EnKF (VTS-EnKF) addresses this by adjusting for position errors, enhancing accuracy in forecasting dust storms, as proven in tests on 2021 events, even with smaller ensembles and time intervals.
Prabhakar Namdev, Maithili Sharan, Piyush Srivastava, and Saroj Kanta Mishra
Geosci. Model Dev., 17, 8093–8114, https://doi.org/10.5194/gmd-17-8093-2024, https://doi.org/10.5194/gmd-17-8093-2024, 2024
Short summary
Short summary
Inadequate representation of surface–atmosphere interaction processes is a major source of uncertainty in numerical weather prediction models. Here, an effort has been made to improve the Weather Research and Forecasting (WRF) model version 4.2.2 by introducing a unique theoretical framework under convective conditions. In addition, to enhance the potential applicability of the WRF modeling system, various commonly used similarity functions under convective conditions have also been installed.
Andrew Gettelman, Richard Forbes, Roger Marchand, Chih-Chieh Chen, and Mark Fielding
Geosci. Model Dev., 17, 8069–8092, https://doi.org/10.5194/gmd-17-8069-2024, https://doi.org/10.5194/gmd-17-8069-2024, 2024
Short summary
Short summary
Supercooled liquid clouds (liquid clouds colder than 0°C) are common at higher latitudes (especially over the Southern Ocean) and are critical for constraining climate projections. We compare a single-column version of a weather model to observations with two different cloud schemes and find that both the dynamical environment and atmospheric aerosols are important for reproducing observations.
Yujuan Wang, Peng Zhang, Jie Li, Yaman Liu, Yanxu Zhang, Jiawei Li, and Zhiwei Han
Geosci. Model Dev., 17, 7995–8021, https://doi.org/10.5194/gmd-17-7995-2024, https://doi.org/10.5194/gmd-17-7995-2024, 2024
Short summary
Short summary
This study updates the CESM's aerosol schemes, focusing on dust, marine aerosol emissions, and secondary organic aerosol (SOA) . Dust emission modifications make deflation areas more continuous, improving results in North America and the sub-Arctic. Humidity correction to sea-salt emissions has a minor effect. Introducing marine organic aerosol emissions, coupled with ocean biogeochemical processes, and adding aqueous reactions for SOA formation advance the CESM's aerosol modelling results.
Lucas A. McMichael, Michael J. Schmidt, Robert Wood, Peter N. Blossey, and Lekha Patel
Geosci. Model Dev., 17, 7867–7888, https://doi.org/10.5194/gmd-17-7867-2024, https://doi.org/10.5194/gmd-17-7867-2024, 2024
Short summary
Short summary
Marine cloud brightening (MCB) is a climate intervention technique to potentially cool the climate. Climate models used to gauge regional climate impacts associated with MCB often assume large areas of the ocean are uniformly perturbed. However, a more realistic representation of MCB application would require information about how an injected particle plume spreads. This work aims to develop such a plume-spreading model.
Leonardo Olivetti and Gabriele Messori
Geosci. Model Dev., 17, 7915–7962, https://doi.org/10.5194/gmd-17-7915-2024, https://doi.org/10.5194/gmd-17-7915-2024, 2024
Short summary
Short summary
Data-driven models are becoming a viable alternative to physics-based models for weather forecasting up to 15 d into the future. However, it is unclear whether they are as reliable as physics-based models when forecasting weather extremes. We evaluate their performance in forecasting near-surface cold, hot, and windy extremes globally. We find that data-driven models can compete with physics-based models and that the choice of the best model mainly depends on the region and type of extreme.
David C. Wong, Jeff Willison, Jonathan E. Pleim, Golam Sarwar, James Beidler, Russ Bullock, Jerold A. Herwehe, Rob Gilliam, Daiwen Kang, Christian Hogrefe, George Pouliot, and Hosein Foroutan
Geosci. Model Dev., 17, 7855–7866, https://doi.org/10.5194/gmd-17-7855-2024, https://doi.org/10.5194/gmd-17-7855-2024, 2024
Short summary
Short summary
This work describe how we linked the meteorological Model for Prediction Across Scales – Atmosphere (MPAS-A) with the Community Multiscale Air Quality (CMAQ) air quality model to form a coupled modelling system. This could be used to study air quality or climate and air quality interaction at a global scale. This new model scales well in high-performance computing environments and performs well with respect to ground surface networks in terms of ozone and PM2.5.
Giulio Mandorli and Claudia J. Stubenrauch
Geosci. Model Dev., 17, 7795–7813, https://doi.org/10.5194/gmd-17-7795-2024, https://doi.org/10.5194/gmd-17-7795-2024, 2024
Short summary
Short summary
In recent years, several studies focused their attention on the disposition of convection. Lots of methods, called indices, have been developed to quantify the amount of convection clustering. These indices are evaluated in this study by defining criteria that must be satisfied and then evaluating the indices against these standards. None of the indices meet all criteria, with some only partially meeting them.
Kerry Anderson, Jack Chen, Peter Englefield, Debora Griffin, Paul A. Makar, and Dan Thompson
Geosci. Model Dev., 17, 7713–7749, https://doi.org/10.5194/gmd-17-7713-2024, https://doi.org/10.5194/gmd-17-7713-2024, 2024
Short summary
Short summary
The Global Forest Fire Emissions Prediction System (GFFEPS) is a model that predicts smoke and carbon emissions from wildland fires. The model calculates emissions from the ground up based on satellite-detected fires, modelled weather and fire characteristics. Unlike other global models, GFFEPS uses daily weather conditions to capture changing burning conditions on a day-to-day basis. GFFEPS produced lower carbon emissions due to the changing weather not captured by the other models.
Samiha Binte Shahid, Forrest G. Lacey, Christine Wiedinmyer, Robert J. Yokelson, and Kelley C. Barsanti
Geosci. Model Dev., 17, 7679–7711, https://doi.org/10.5194/gmd-17-7679-2024, https://doi.org/10.5194/gmd-17-7679-2024, 2024
Short summary
Short summary
The Next-generation Emissions InVentory expansion of Akagi (NEIVA) v.1.0 is a comprehensive biomass burning emissions database that allows integration of new data and flexible querying. Data are stored in connected datasets, including recommended averages of ~1500 constituents for 14 globally relevant fire types. Individual compounds were mapped to common model species to allow better attribution of emissions in modeling studies that predict the effects of fires on air quality and climate.
Lucie Bakels, Daria Tatsii, Anne Tipka, Rona Thompson, Marina Dütsch, Michael Blaschek, Petra Seibert, Katharina Baier, Silvia Bucci, Massimo Cassiani, Sabine Eckhardt, Christine Groot Zwaaftink, Stephan Henne, Pirmin Kaufmann, Vincent Lechner, Christian Maurer, Marie D. Mulder, Ignacio Pisso, Andreas Plach, Rakesh Subramanian, Martin Vojta, and Andreas Stohl
Geosci. Model Dev., 17, 7595–7627, https://doi.org/10.5194/gmd-17-7595-2024, https://doi.org/10.5194/gmd-17-7595-2024, 2024
Short summary
Short summary
Computer models are essential for improving our understanding of how gases and particles move in the atmosphere. We present an update of the atmospheric transport model FLEXPART. FLEXPART 11 is more accurate due to a reduced number of interpolations and a new scheme for wet deposition. It can simulate non-spherical aerosols and includes linear chemical reactions. It is parallelised using OpenMP and includes new user options. A new user manual details how to use FLEXPART 11.
Jaroslav Resler, Petra Bauerová, Michal Belda, Martin Bureš, Kryštof Eben, Vladimír Fuka, Jan Geletič, Radek Jareš, Jan Karel, Josef Keder, Pavel Krč, William Patiño, Jelena Radović, Hynek Řezníček, Matthias Sühring, Adriana Šindelářová, and Ondřej Vlček
Geosci. Model Dev., 17, 7513–7537, https://doi.org/10.5194/gmd-17-7513-2024, https://doi.org/10.5194/gmd-17-7513-2024, 2024
Short summary
Short summary
Detailed modeling of urban air quality in stable conditions is a challenge. We show the unprecedented sensitivity of a large eddy simulation (LES) model to meteorological boundary conditions and model parameters in an urban environment under stable conditions. We demonstrate the crucial role of boundary conditions for the comparability of results with observations. The study reveals a strong sensitivity of the results to model parameters and model numerical instabilities during such conditions.
Jorge E. Pachón, Mariel A. Opazo, Pablo Lichtig, Nicolas Huneeus, Idir Bouarar, Guy Brasseur, Cathy W. Y. Li, Johannes Flemming, Laurent Menut, Camilo Menares, Laura Gallardo, Michael Gauss, Mikhail Sofiev, Rostislav Kouznetsov, Julia Palamarchuk, Andreas Uppstu, Laura Dawidowski, Nestor Y. Rojas, María de Fátima Andrade, Mario E. Gavidia-Calderón, Alejandro H. Delgado Peralta, and Daniel Schuch
Geosci. Model Dev., 17, 7467–7512, https://doi.org/10.5194/gmd-17-7467-2024, https://doi.org/10.5194/gmd-17-7467-2024, 2024
Short summary
Short summary
Latin America (LAC) has some of the most populated urban areas in the world, with high levels of air pollution. Air quality management in LAC has been traditionally focused on surveillance and building emission inventories. This study performed the first intercomparison and model evaluation in LAC, with interesting and insightful findings for the region. A multiscale modeling ensemble chain was assembled as a first step towards an air quality forecasting system.
David Ho, Michał Gałkowski, Friedemann Reum, Santiago Botía, Julia Marshall, Kai Uwe Totsche, and Christoph Gerbig
Geosci. Model Dev., 17, 7401–7422, https://doi.org/10.5194/gmd-17-7401-2024, https://doi.org/10.5194/gmd-17-7401-2024, 2024
Short summary
Short summary
Atmospheric model users often overlook the impact of the land–atmosphere interaction. This study accessed various setups of WRF-GHG simulations that ensure consistency between the model and driving reanalysis fields. We found that a combination of nudging and frequent re-initialization allows certain improvement by constraining the soil moisture fields and, through its impact on atmospheric mixing, improves atmospheric transport.
Phuong Loan Nguyen, Lisa V. Alexander, Marcus J. Thatcher, Son C. H. Truong, Rachael N. Isphording, and John L. McGregor
Geosci. Model Dev., 17, 7285–7315, https://doi.org/10.5194/gmd-17-7285-2024, https://doi.org/10.5194/gmd-17-7285-2024, 2024
Short summary
Short summary
We use a comprehensive approach to select a subset of CMIP6 models for dynamical downscaling over Southeast Asia, taking into account model performance, model independence, data availability and the range of future climate projections. The standardised benchmarking framework is applied to assess model performance through both statistical and process-based metrics. Ultimately, we identify two independent model groups that are suitable for dynamical downscaling in the Southeast Asian region.
Ingrid Super, Tia Scarpelli, Arjan Droste, and Paul I. Palmer
Geosci. Model Dev., 17, 7263–7284, https://doi.org/10.5194/gmd-17-7263-2024, https://doi.org/10.5194/gmd-17-7263-2024, 2024
Short summary
Short summary
Monitoring greenhouse gas emission reductions requires a combination of models and observations, as well as an initial emission estimate. Each component provides information with a certain level of certainty and is weighted to yield the most reliable estimate of actual emissions. We describe efforts for estimating the uncertainty in the initial emission estimate, which significantly impacts the outcome. Hence, a good uncertainty estimate is key for obtaining reliable information on emissions.
Álvaro González-Cervera and Luis Durán
Geosci. Model Dev., 17, 7245–7261, https://doi.org/10.5194/gmd-17-7245-2024, https://doi.org/10.5194/gmd-17-7245-2024, 2024
Short summary
Short summary
RASCAL is an open-source Python tool designed for reconstructing daily climate observations, especially in regions with complex local phenomena. It merges large-scale weather patterns with local weather using the analog method. Evaluations in central Spain show that RASCAL outperforms ERA20C reanalysis in reconstructing precipitation and temperature. RASCAL offers opportunities for broad scientific applications, from short-term forecasts to local-scale climate change scenarios.
Sun-Young Park, Kyo-Sun Sunny Lim, Kwonil Kim, Gyuwon Lee, and Jason A. Milbrandt
Geosci. Model Dev., 17, 7199–7218, https://doi.org/10.5194/gmd-17-7199-2024, https://doi.org/10.5194/gmd-17-7199-2024, 2024
Short summary
Short summary
We enhance the WDM6 scheme by incorporating predicted graupel density. The modification affects graupel characteristics, including fall velocity–diameter and mass–diameter relationships. Simulations highlight changes in graupel distribution and precipitation patterns, potentially influencing surface snow amounts. The study underscores the significance of integrating predicted graupel density for a more realistic portrayal of microphysical properties in weather models.
Christos I. Efstathiou, Elizabeth Adams, Carlie J. Coats, Robert Zelt, Mark Reed, John McGee, Kristen M. Foley, Fahim I. Sidi, David C. Wong, Steven Fine, and Saravanan Arunachalam
Geosci. Model Dev., 17, 7001–7027, https://doi.org/10.5194/gmd-17-7001-2024, https://doi.org/10.5194/gmd-17-7001-2024, 2024
Short summary
Short summary
We present a summary of enabling high-performance computing of the Community Multiscale Air Quality Model (CMAQ) – a state-of-the-science community multiscale air quality model – on two cloud computing platforms through documenting the technologies, model performance, scaling and relative merits. This may be a new paradigm for computationally intense future model applications. We initiated this work due to a need to leverage cloud computing advances and to ease the learning curve for new users.
Peter A. Bogenschutz, Jishi Zhang, Qi Tang, and Philip Cameron-Smith
Geosci. Model Dev., 17, 7029–7050, https://doi.org/10.5194/gmd-17-7029-2024, https://doi.org/10.5194/gmd-17-7029-2024, 2024
Short summary
Short summary
Using high-resolution and state-of-the-art modeling techniques we simulate five atmospheric river events for California to test the capability to represent precipitation for these events. We find that our model is able to capture the distribution of precipitation very well but suffers from overestimating the precipitation amounts over high elevation. Increasing the resolution further has no impact on reducing this bias, while increasing the domain size does have modest impacts.
Manu Anna Thomas, Klaus Wyser, Shiyu Wang, Marios Chatziparaschos, Paraskevi Georgakaki, Montserrat Costa-Surós, Maria Gonçalves Ageitos, Maria Kanakidou, Carlos Pérez García-Pando, Athanasios Nenes, Twan van Noije, Philippe Le Sager, and Abhay Devasthale
Geosci. Model Dev., 17, 6903–6927, https://doi.org/10.5194/gmd-17-6903-2024, https://doi.org/10.5194/gmd-17-6903-2024, 2024
Short summary
Short summary
Aerosol–cloud interactions occur at a range of spatio-temporal scales. While evaluating recent developments in EC-Earth3-AerChem, this study aims to understand the extent to which the Twomey effect manifests itself at larger scales. We find a reduction in the warm bias over the Southern Ocean due to model improvements. While we see footprints of the Twomey effect at larger scales, the negative relationship between cloud droplet number and liquid water drives the shortwave radiative effect.
Kai Cao, Qizhong Wu, Lingling Wang, Hengliang Guo, Nan Wang, Huaqiong Cheng, Xiao Tang, Dongxing Li, Lina Liu, Dongqing Li, Hao Wu, and Lanning Wang
Geosci. Model Dev., 17, 6887–6901, https://doi.org/10.5194/gmd-17-6887-2024, https://doi.org/10.5194/gmd-17-6887-2024, 2024
Short summary
Short summary
AMD’s heterogeneous-compute interface for portability was implemented to port the piecewise parabolic method solver from NVIDIA GPUs to China's GPU-like accelerators. The results show that the larger the model scale, the more acceleration effect on the GPU-like accelerator, up to 28.9 times. The multi-level parallelism achieves a speedup of 32.7 times on the heterogeneous cluster. By comparing the results, the GPU-like accelerators have more accuracy for the geoscience numerical models.
Ruyi Zhang, Limin Zhou, Shin-ichiro Shima, and Huawei Yang
Geosci. Model Dev., 17, 6761–6774, https://doi.org/10.5194/gmd-17-6761-2024, https://doi.org/10.5194/gmd-17-6761-2024, 2024
Short summary
Short summary
Solar activity weakly ionises Earth's atmosphere, charging cloud droplets. Electro-coalescence is when oppositely charged droplets stick together. We introduce an analytical expression of electro-coalescence probability and use it in a warm-cumulus-cloud simulation. Results show that charge cases increase rain and droplet size, with the new method outperforming older ones. The new method requires longer computation time, but its impact on rain justifies inclusion in meteorology models.
Máté Mile, Stephanie Guedj, and Roger Randriamampianina
Geosci. Model Dev., 17, 6571–6587, https://doi.org/10.5194/gmd-17-6571-2024, https://doi.org/10.5194/gmd-17-6571-2024, 2024
Short summary
Short summary
Satellite observations provide crucial information about atmospheric constituents in a global distribution that helps to better predict the weather over sparsely observed regions like the Arctic. However, the use of satellite data is usually conservative and imperfect. In this study, a better spatial representation of satellite observations is discussed and explored by a so-called footprint function or operator, highlighting its added value through a case study and diagnostics.
Lukas Pfitzenmaier, Pavlos Kollias, Nils Risse, Imke Schirmacher, Bernat Puigdomenech Treserras, and Katia Lamer
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-129, https://doi.org/10.5194/gmd-2024-129, 2024
Revised manuscript accepted for GMD
Short summary
Short summary
Orbital-radar is a Python tool transferring sub-orbital radar data (ground-based, airborne, and forward-simulated NWP) into synthetical space-borne cloud profiling radar data mimicking the platform characteristics, e.g. EarthCARE or CloudSat CPR. The novelty of orbital-radar is the simulation platform characteristic noise floors and errors. By this long time data sets can be transformed into synthetic observations for Cal/Valor sensitivity studies for new or future satellite missions.
Hynek Bednář and Holger Kantz
Geosci. Model Dev., 17, 6489–6511, https://doi.org/10.5194/gmd-17-6489-2024, https://doi.org/10.5194/gmd-17-6489-2024, 2024
Short summary
Short summary
The forecast error growth of atmospheric phenomena is caused by initial and model errors. When studying the initial error growth, it may turn out that small-scale phenomena, which contribute little to the forecast product, significantly affect the ability to predict this product. With a negative result, we investigate in the extended Lorenz (2005) system whether omitting these phenomena will improve predictability. A theory explaining and describing this behavior is developed.
Giorgio Veratti, Alessandro Bigi, Sergio Teggi, and Grazia Ghermandi
Geosci. Model Dev., 17, 6465–6487, https://doi.org/10.5194/gmd-17-6465-2024, https://doi.org/10.5194/gmd-17-6465-2024, 2024
Short summary
Short summary
In this study, we present VERT (Vehicular Emissions from Road Traffic), an R package designed to estimate transport emissions using traffic estimates and vehicle fleet composition data. Compared to other tools available in the literature, VERT stands out for its user-friendly configuration and flexibility of user input. Case studies demonstrate its accuracy in both urban and regional contexts, making it a valuable tool for air quality management and transport scenario planning.
Sam P. Raj, Puna Ram Sinha, Rohit Srivastava, Srinivas Bikkina, and Damu Bala Subrahamanyam
Geosci. Model Dev., 17, 6379–6399, https://doi.org/10.5194/gmd-17-6379-2024, https://doi.org/10.5194/gmd-17-6379-2024, 2024
Short summary
Short summary
A Python successor to the aerosol module of the OPAC model, named AeroMix, has been developed, with enhanced capabilities to better represent real atmospheric aerosol mixing scenarios. AeroMix’s performance in modeling aerosol mixing states has been evaluated against field measurements, substantiating its potential as a versatile aerosol optical model framework for next-generation algorithms to infer aerosol mixing states and chemical composition.
Angeline G. Pendergrass, Michael P. Byrne, Oliver Watt-Meyer, Penelope Maher, and Mark J. Webb
Geosci. Model Dev., 17, 6365–6378, https://doi.org/10.5194/gmd-17-6365-2024, https://doi.org/10.5194/gmd-17-6365-2024, 2024
Short summary
Short summary
The width of the tropical rain belt affects many aspects of our climate, yet we do not understand what controls it. To better understand it, we present a method to change it in numerical model experiments. We show that the method works well in four different models. The behavior of the width is unexpectedly simple in some ways, such as how strong the winds are as it changes, but in other ways, it is more complicated, especially how temperature increases with carbon dioxide.
Tianning Su and Yunyan Zhang
Geosci. Model Dev., 17, 6319–6336, https://doi.org/10.5194/gmd-17-6319-2024, https://doi.org/10.5194/gmd-17-6319-2024, 2024
Short summary
Short summary
Using 2 decades of field observations over the Southern Great Plains, this study developed a deep-learning model to simulate the complex dynamics of boundary layer clouds. The deep-learning model can serve as the cloud parameterization within reanalysis frameworks, offering insights into improving the simulation of low clouds. By quantifying biases due to various meteorological factors and parameterizations, this deep-learning-driven approach helps bridge the observation–modeling divide.
Siyuan Chen, Yi Zhang, Yiming Wang, Zhuang Liu, Xiaohan Li, and Wei Xue
Geosci. Model Dev., 17, 6301–6318, https://doi.org/10.5194/gmd-17-6301-2024, https://doi.org/10.5194/gmd-17-6301-2024, 2024
Short summary
Short summary
This study explores strategies and techniques for implementing mixed-precision code optimization within an atmosphere model dynamical core. The coded equation terms in the governing equations that are sensitive (or insensitive) to the precision level have been identified. The performance of mixed-precision computing in weather and climate simulations was analyzed.
Sam O. Owens, Dipanjan Majumdar, Chris E. Wilson, Paul Bartholomew, and Maarten van Reeuwijk
Geosci. Model Dev., 17, 6277–6300, https://doi.org/10.5194/gmd-17-6277-2024, https://doi.org/10.5194/gmd-17-6277-2024, 2024
Short summary
Short summary
Designing cities that are resilient, sustainable, and beneficial to health requires an understanding of urban climate and air quality. This article presents an upgrade to the multi-physics numerical model uDALES, which can simulate microscale airflow, heat transfer, and pollutant dispersion in urban environments. This upgrade enables it to resolve realistic urban geometries more accurately and to take advantage of the resources available on current and future high-performance computing systems.
Allison A. Wing, Levi G. Silvers, and Kevin A. Reed
Geosci. Model Dev., 17, 6195–6225, https://doi.org/10.5194/gmd-17-6195-2024, https://doi.org/10.5194/gmd-17-6195-2024, 2024
Short summary
Short summary
This paper presents the experimental design for a model intercomparison project to study tropical clouds and climate. It is a follow-up from a prior project that used a simplified framework for tropical climate. The new project adds one new component – a specified pattern of sea surface temperatures as the lower boundary condition. We provide example results from one cloud-resolving model and one global climate model and test the sensitivity to the experimental parameters.
Philip G. Sansom and Jennifer L. Catto
Geosci. Model Dev., 17, 6137–6151, https://doi.org/10.5194/gmd-17-6137-2024, https://doi.org/10.5194/gmd-17-6137-2024, 2024
Short summary
Short summary
Weather fronts bring a lot of rain and strong winds to many regions of the mid-latitudes. We have developed an updated method of identifying these fronts in gridded data that can be used on new datasets with small grid spacing. The method can be easily applied to different datasets due to the use of open-source software for its development and shows improvements over similar previous methods. We present an updated estimate of the average frequency of fronts over the past 40 years.
Kelly M. Núñez Ocasio and Zachary L. Moon
Geosci. Model Dev., 17, 6035–6049, https://doi.org/10.5194/gmd-17-6035-2024, https://doi.org/10.5194/gmd-17-6035-2024, 2024
Short summary
Short summary
TAMS is an open-source Python-based package for tracking and classifying mesoscale convective systems that can be used to study observed and simulated systems. Each step of the algorithm is described in this paper with examples showing how to make use of visualization and post-processing tools within the package. A unique and valuable feature of this tracker is its support for unstructured grids in the identification stage and grid-independent tracking.
Irene C. Dedoussi, Daven K. Henze, Sebastian D. Eastham, Raymond L. Speth, and Steven R. H. Barrett
Geosci. Model Dev., 17, 5689–5703, https://doi.org/10.5194/gmd-17-5689-2024, https://doi.org/10.5194/gmd-17-5689-2024, 2024
Short summary
Short summary
Atmospheric model gradients provide a meaningful tool for better understanding the underlying atmospheric processes. Adjoint modeling enables computationally efficient gradient calculations. We present the adjoint of the GEOS-Chem unified chemistry extension (UCX). With this development, the GEOS-Chem adjoint model can capture stratospheric ozone and other processes jointly with tropospheric processes. We apply it to characterize the Antarctic ozone depletion potential of active halogen species.
Sylvain Mailler, Sotirios Mallios, Arineh Cholakian, Vassilis Amiridis, Laurent Menut, and Romain Pennel
Geosci. Model Dev., 17, 5641–5655, https://doi.org/10.5194/gmd-17-5641-2024, https://doi.org/10.5194/gmd-17-5641-2024, 2024
Short summary
Short summary
We propose two explicit expressions to calculate the settling speed of solid atmospheric particles with prolate spheroidal shapes. The first formulation is based on theoretical arguments only, while the second one is based on computational fluid dynamics calculations. We show that the first method is suitable for virtually all atmospheric aerosols, provided their shape can be adequately described as a prolate spheroid, and we provide an implementation of the first method in AerSett v2.0.2.
Hejun Xie, Lei Bi, and Wei Han
Geosci. Model Dev., 17, 5657–5688, https://doi.org/10.5194/gmd-17-5657-2024, https://doi.org/10.5194/gmd-17-5657-2024, 2024
Short summary
Short summary
A radar operator plays a crucial role in utilizing radar observations to enhance numerical weather forecasts. However, developing an advanced radar operator is challenging due to various complexities associated with the wave scattering by non-spherical hydrometeors, radar beam propagation, and multiple platforms. In this study, we introduce a novel radar operator named the Accurate and Efficient Radar Operator developed by ZheJiang University (ZJU-AERO) which boasts several unique features.
Jonathan J. Day, Gunilla Svensson, Barbara Casati, Taneil Uttal, Siri-Jodha Khalsa, Eric Bazile, Elena Akish, Niramson Azouz, Lara Ferrighi, Helmut Frank, Michael Gallagher, Øystein Godøy, Leslie M. Hartten, Laura X. Huang, Jareth Holt, Massimo Di Stefano, Irene Suomi, Zen Mariani, Sara Morris, Ewan O'Connor, Roberta Pirazzini, Teresa Remes, Rostislav Fadeev, Amy Solomon, Johanna Tjernström, and Mikhail Tolstykh
Geosci. Model Dev., 17, 5511–5543, https://doi.org/10.5194/gmd-17-5511-2024, https://doi.org/10.5194/gmd-17-5511-2024, 2024
Short summary
Short summary
The YOPP site Model Intercomparison Project (YOPPsiteMIP), which was designed to facilitate enhanced weather forecast evaluation in polar regions, is discussed here, focussing on describing the archive of forecast data and presenting a multi-model evaluation at Arctic supersites during February and March 2018. The study highlights an underestimation in boundary layer temperature variance that is common across models and a related inability to forecast cold extremes at several of the sites.
Hossain Mohammed Syedul Hoque, Kengo Sudo, Hitoshi Irie, Yanfeng He, and Md Firoz Khan
Geosci. Model Dev., 17, 5545–5571, https://doi.org/10.5194/gmd-17-5545-2024, https://doi.org/10.5194/gmd-17-5545-2024, 2024
Short summary
Short summary
Using multi-platform observations, we validated global formaldehyde (HCHO) simulations from a chemistry transport model. HCHO is a crucial intermediate in the chemical catalytic cycle that governs the ozone formation in the troposphere. The model was capable of replicating the observed spatiotemporal variability in HCHO. In a few cases, the model's capability was limited. This is attributed to the uncertainties in the observations and the model parameters.
Zijun Liu, Li Dong, Zongxu Qiu, Xingrong Li, Huiling Yuan, Dongmei Meng, Xiaobin Qiu, Dingyuan Liang, and Yafei Wang
Geosci. Model Dev., 17, 5477–5496, https://doi.org/10.5194/gmd-17-5477-2024, https://doi.org/10.5194/gmd-17-5477-2024, 2024
Short summary
Short summary
In this study, we completed a series of simulations with MPAS-Atmosphere (version 7.3) to study the extreme precipitation event of Henan, China, during 20–22 July 2021. We found the different performance of two built-in parameterization scheme suites (mesoscale and convection-permitting suites) with global quasi-uniform and variable-resolution meshes. This study holds significant implications for advancing the understanding of the scale-aware capability of MPAS-Atmosphere.
Laurent Menut, Arineh Cholakian, Romain Pennel, Guillaume Siour, Sylvain Mailler, Myrto Valari, Lya Lugon, and Yann Meurdesoif
Geosci. Model Dev., 17, 5431–5457, https://doi.org/10.5194/gmd-17-5431-2024, https://doi.org/10.5194/gmd-17-5431-2024, 2024
Short summary
Short summary
A new version of the CHIMERE model is presented. This version contains both computational and physico-chemical changes. The computational changes make it easy to choose the variables to be extracted as a result, including values of maximum sub-hourly concentrations. Performance tests show that the model is 1.5 to 2 times faster than the previous version for the same setup. Processes such as turbulence, transport schemes and dry deposition have been modified and updated.
G. Alexander Sokolowsky, Sean W. Freeman, William K. Jones, Julia Kukulies, Fabian Senf, Peter J. Marinescu, Max Heikenfeld, Kelcy N. Brunner, Eric C. Bruning, Scott M. Collis, Robert C. Jackson, Gabrielle R. Leung, Nils Pfeifer, Bhupendra A. Raut, Stephen M. Saleeby, Philip Stier, and Susan C. van den Heever
Geosci. Model Dev., 17, 5309–5330, https://doi.org/10.5194/gmd-17-5309-2024, https://doi.org/10.5194/gmd-17-5309-2024, 2024
Short summary
Short summary
Building on previous analysis tools developed for atmospheric science, the original release of the Tracking and Object-Based Analysis (tobac) Python package, v1.2, was open-source, modular, and insensitive to the type of gridded input data. Here, we present the latest version of tobac, v1.5, which substantially improves scientific capabilities and computational efficiency from the previous version. These enhancements permit new uses for tobac in atmospheric science and potentially other fields.
Taneil Uttal, Leslie M. Hartten, Siri Jodha Khalsa, Barbara Casati, Gunilla Svensson, Jonathan Day, Jareth Holt, Elena Akish, Sara Morris, Ewan O'Connor, Roberta Pirazzini, Laura X. Huang, Robert Crawford, Zen Mariani, Øystein Godøy, Johanna A. K. Tjernström, Giri Prakash, Nicki Hickmon, Marion Maturilli, and Christopher J. Cox
Geosci. Model Dev., 17, 5225–5247, https://doi.org/10.5194/gmd-17-5225-2024, https://doi.org/10.5194/gmd-17-5225-2024, 2024
Short summary
Short summary
A Merged Observatory Data File (MODF) format to systematically collate complex atmosphere, ocean, and terrestrial data sets collected by multiple instruments during field campaigns is presented. The MODF format is also designed to be applied to model output data, yielding format-matching Merged Model Data Files (MMDFs). MODFs plus MMDFs will augment and accelerate the synergistic use of model results with observational data to increase understanding and predictive skill.
Chongzhi Yin, Shin-ichiro Shima, Lulin Xue, and Chunsong Lu
Geosci. Model Dev., 17, 5167–5189, https://doi.org/10.5194/gmd-17-5167-2024, https://doi.org/10.5194/gmd-17-5167-2024, 2024
Short summary
Short summary
We investigate numerical convergence properties of a particle-based numerical cloud microphysics model (SDM) and a double-moment bulk scheme for simulating a marine stratocumulus case, compare their results with model intercomparison project results, and present possible explanations for the different results of the SDM and the bulk scheme. Aerosol processes can be accurately simulated using SDM, and this may be an important factor affecting the behavior and morphology of marine stratocumulus.
Zichen Wu, Xueshun Chen, Zifa Wang, Huansheng Chen, Zhe Wang, Qing Mu, Lin Wu, Wending Wang, Xiao Tang, Jie Li, Ying Li, Qizhong Wu, Yang Wang, Zhiyin Zou, and Zijian Jiang
EGUsphere, https://doi.org/10.5194/egusphere-2024-1437, https://doi.org/10.5194/egusphere-2024-1437, 2024
Short summary
Short summary
We developed a model to simulate polycyclic aromatic hydrocarbons (PAHs) from global to regional scales. The model can well reproduce the distribution of PAHs. The concentration of BaP (indicator species for PAHs) could exceed the target values of 1 ng m-3 over some areas (e.g., in central Europe, India, and eastern China). The change of BaP is less than PM2.5 from 2013 to 2018. China still faces significant potential health risks posed by BaP although "the Action Plan" has been implemented.
Alberto Martilli, Negin Nazarian, E. Scott Krayenhoff, Jacob Lachapelle, Jiachen Lu, Esther Rivas, Alejandro Rodriguez-Sanchez, Beatriz Sanchez, and José Luis Santiago
Geosci. Model Dev., 17, 5023–5039, https://doi.org/10.5194/gmd-17-5023-2024, https://doi.org/10.5194/gmd-17-5023-2024, 2024
Short summary
Short summary
Here, we present a model that quantifies the thermal stress and its microscale variability at a city scale with a mesoscale model. This tool can have multiple applications, from early warnings of extreme heat to the vulnerable population to the evaluation of the effectiveness of heat mitigation strategies. It is the first model that includes information on microscale variability in a mesoscale model, something that is essential for fully evaluating heat stress.
Nathan P. Arnold
Geosci. Model Dev., 17, 5041–5056, https://doi.org/10.5194/gmd-17-5041-2024, https://doi.org/10.5194/gmd-17-5041-2024, 2024
Short summary
Short summary
Earth system models often represent the land surface at smaller scales than the atmosphere, but surface–atmosphere coupling uses only aggregated surface properties. This study presents a method to allow heterogeneous surface properties to modify boundary layer updrafts. The method is tested in single column experiments. Updraft properties are found to reasonably covary with surface conditions, and simulated boundary layer variability is enhanced over more heterogeneous land surfaces.
Enrico Dammers, Janot Tokaya, Christian Mielke, Kevin Hausmann, Debora Griffin, Chris McLinden, Henk Eskes, and Renske Timmermans
Geosci. Model Dev., 17, 4983–5007, https://doi.org/10.5194/gmd-17-4983-2024, https://doi.org/10.5194/gmd-17-4983-2024, 2024
Short summary
Short summary
Nitrogen dioxide (NOx) is produced by sources such as industry and traffic and is directly linked to negative impacts on health and the environment. The current construction of emission inventories to keep track of NOx emissions is slow and time-consuming. Satellite measurements provide a way to quickly and independently estimate emissions. In this study, we apply a consistent methodology to derive NOx emissions over Germany and illustrate the value of having such a method for fast projections.
Yuhan Xu, Sheng Fang, Xinwen Dong, and Shuhan Zhuang
Geosci. Model Dev., 17, 4961–4982, https://doi.org/10.5194/gmd-17-4961-2024, https://doi.org/10.5194/gmd-17-4961-2024, 2024
Short summary
Short summary
Recent atmospheric radionuclide leakages from unknown sources have posed a new challenge in nuclear emergency assessment. Reconstruction via environmental observations is the only feasible way to identify sources, but simultaneous reconstruction of the source location and release rate yields high uncertainties. We propose a spatiotemporally separated reconstruction strategy that avoids these uncertainties and outperforms state-of-the-art methods with respect to accuracy and uncertainty ranges.
Cited articles
Avnery, S., Mauzerall, D. L., Liu, J., and Horowitz, L. W.: Global crop yield
reductions due to surface ozone exposure: 1. Year 2000 crop production losses
and economic damage, Atmos. Environ., 45, 2284–2296,
https://doi.org/10.1016/j.atmosenv.2010.11.045, 2011. a
Bey, I., Jacob, D. J., Yantosca, R. M., Logan, J. A., Field, B. D., Fiore, A.
M., Li, Q., Liu, H. Y., Mickley, L. J., and Schultz, M. G. Global modeling of
tropospheric chemistry with assimilated meteorology: Model description and
evaluation, J. Geophys. Res., 106, 23073–23095, https://doi.org/10.1029/2001JD000807,
2001. a, b
Battaglino, C., Ballard, G., and Kolda, T. G.: A practical randomized CP
tensor decomposition, SIAM J. Matrix Anal. A., 39, 876–901, 2018. a
Benner, P., Gugercin, S., and Willcox, K.: A survey of projection-based model
reduction methods for parametric dynamical systems, SIAM Rev., 57, 483–531,
2015. a
Bian, H. and Prather, M. J.: Fast-J2: Accurate Simulation of Stratospheric
Photolysis in Global Chemical Models, J. Atmos. Chem., 41, 281–296,
https://doi.org/10.1023/A:1014980619462, 2002. a
Brasseur, G. P. and Jacob, D. J.: Modeling of Atmospheric Chemistry,
Cambridge University Press, Cambridge, UK, 2017. a
Cooper, M., Martin, R. V., Wespes, C., Coheur, P.-F., Clerbaux, C., and
Murray, L. T.: Tropospheric nitric acid columns from the IASI satellite
instrument interpreted with a chemical transport model: Implications for
parameterizations of nitric oxide production by lightning, J. Geophys.
Res.-Atmos., 119, 10068–10079, https://doi.org/10.1002/2014JD021907, 2014. a
Cunningham, J. P. and Ghahramani, Z.: Linear dimensionality reduction:
survey, insights, and generalizations, J. Mach. Learn. Res., 16, 2859–2900,
2015. a
Drineas, P. and Mahoney, M. W.: RandNLA: randomized numerical linear algebra,
Commun. ACM, 59, 80–90, 2016. a
Eastham, S. D., Weisenstein, D. K., and Barrett, S. R.: Development and
evaluation of the unified tropospheric–stratospheric chemistry extension
(UCX) for the global chemistry-transport model GEOS-Chem, Atmos. Environ.,
89, 52–63, https://doi.org/10.1016/j.atmosenv.2014.02.001, 2014. a
Eastham, S. D., Long, M. S., Keller, C. A., Lundgren, E., Yantosca, R. M.,
Zhuang, J., Li, C., Lee, C. J., Yannetti, M., Auer, B. M., Clune, T. L.,
Kouatchou, J., Putman, W. M., Thompson, M. A., Trayanov, A. L., Molod, A. M.,
Martin, R. V., and Jacob, D. J.: GEOS-Chem High Performance (GCHP v11-02c): a
next-generation implementation of the GEOS-Chem chemical transport model for
massively parallel applications, Geosci. Model Dev., 11, 2941–2953,
https://doi.org/10.5194/gmd-11-2941-2018, 2018. a
Eckart, C. and Young, G.: The approximation of one matrix by another of lower
rank, Psychometrika, 1, 211–218, 1936. a
Erichson, N. B., Voronin, S., Brunton, S. L., and Kutz, J. N.: Randomized
matrix decompositions using R, arXiv preprint, arXiv:1608.02148, 2016. a
Erichson, N. B., Brunton, S. L., and Kutz, J. N.: Compressed singular value
decomposition for image and video processing, in: 2017 IEEE International
Conference on Computer Vision Workshops (ICCVW), Venice, Italy, 22–29
October 2017, IEEE, 1880–1888, 2017a. a
Erichson, N. B., Manohar, K., Brunton, S. L., and Kutz, J. N.: Randomized CP
tensor decomposition, arXiv preprint, arXiv:1703.09074, 2017b. a
Erichson, N. B., Mendible, A., Wihlborn, S., and Kutz, J. N.: Randomized
Nonnegative Matrix Factorization, Pattern Recogn. Lett., 104, 1–7, 2018a. a
Erichson, N. B., Zeng, P., Manohar, K., Brunton, S. L., Kutz, J. N., and
Aravkin, A. Y.: Sparse Principal Component Analysis via Variable Projection,
arXiv preprint, arXiv:1804.00341, 2018b. a
Erichson, N. B.: Ristretto, available at:
https://github.com/erichson/ristretto, last access: 15 April 2019. a
Gillis, N.: Introduction to nonnegative matrix factorization, arXiv preprint
arXiv: 1703.00663, 2017. a
Gittens, A., Rothauge, K., Wang, S., Mahoney, M. W., Gerhardt, L., Kottalam,
J., Ringenburg, M., and Maschhoff, K.: Accelerating Large-Scale Data Analysis by Offloading to
High-Performance Computing Libraries using Alchemist, arXiv preprint,
arXiv:1805.11800, 2018. a
Hu, L., Keller, C. A., Long, M. S., Sherwen, T., Auer, B., Da Silva, A.,
Nielsen, J. E., Pawson, S., Thompson, M. A., Trayanov, A. L., Travis, K. R.,
Grange, S. K., Evans, M. J., and Jacob, D. J.: Global simulation of
tropospheric chemistry at 12.5 km resolution: performance and evaluation of
the GEOS-Chem chemical module (v10-1) within the NASA GEOS Earth system model
(GEOS-5 ESM), Geosci. Model Dev., 11, 4603–4620,
https://doi.org/10.5194/gmd-11-4603-2018, 2018. a
Juntto, S. and Paatero, P.: Analysis of daily precipitation data by positive
matrix factorization, Environmetrics, 5, 127–144, 1994. a
Kutz, J. N., Brunton, S. L., Brunton, B. W., and Proctor, J. L.: Dynamic Mode
Decomposition: Data-Driven Modeling of Complex Systems, SIAM-Society for
Industrial and Applied Mathematics, USA, 2016. a
Lee, D. D. and Seung, S. H.: Learning the parts of objects by non-negative
matrix factorization, Nature, 401, 788–791, 1999. a
Lee, E., Chan, C. K., and Paatero, P.: Application of positive matrix
factorization in source apportionment of particulate pollutants in Hong Kong,
Atmos. Environ., 33, 3201–3212, 1999. a
Long, M. S., Yantosca, R., Nielsen, J. E., Keller, C. A., da Silva, A.,
Sulprizio, M. P., Pawson, S., and Jacob, D. J.: Development of a
grid-independent GEOS-Chem chemical transport model (v9-02) as an atmospheric
chemistry module for Earth system models, Geosci. Model Dev., 8, 595–602,
https://doi.org/10.5194/gmd-8-595-2015, 2015. a
Mahoney, M. W.: Randomized
algorithms for matrices and data, Foundations and Trends in Machine Learning,
3, 123–224, 2011. a
Mao, J., Jacob, D. J., Evans, M. J., Olson, J. R., Ren, X., Brune, W. H.,
Clair, J. M. St., Crounse, J. D., Spencer, K. M., Beaver, M. R., Wennberg, P.
O., Cubison, M. J., Jimenez, J. L., Fried, A., Weibring, P., Walega, J. G.,
Hall, S. R., Weinheimer, A. J., Cohen, R. C., Chen, G., Crawford, J. H.,
McNaughton, C., Clarke, A. D., Jaeglé, L., Fisher, J. A., Yantosca, R.
M., Le Sager, P., and Carouge, C.: Chemistry of hydrogen oxide radicals (HOx)
in the Arctic troposphere in spring, Atmos. Chem. Phys., 10, 5823–5838,
https://doi.org/10.5194/acp-10-5823-2010, 2010. a
Mao, J., Paulot, F., Jacob, D. J., Cohen, R. C., Crounse, J. D., Wennberg,
P. O., Keller, C. A., Hudman, R. C., Barkley, M. P., and Horowitz, L. W.:
Ozone and organic nitrates over the eastern United States: Sensitivity to
isoprene chemistry, J. Geophys. Res.-Atmos., 118, 11256–11268,
https://doi.org/10.1002/jgrd.50817, 2013. a
Mao, J., Carlton, A., Cohen, R. C., Brune, W. H., Brown, S. S., Wolfe, G. M.,
Jimenez, J. L., Pye, H. O. T., Lee Ng, N., Xu, L., McNeill, V. F.,
Tsigaridis, K., McDonald, B. C., Warneke, C., Guenther, A., Alvarado, M. J.,
de Gouw, J., Mickley, L. J., Leibensperger, E. M., Mathur, R., Nolte, C. G.,
Portmann, R. W., Unger, N., Tosca, M., and Horowitz, L. W.: Southeast
Atmosphere Studies: learning from model-observation syntheses, Atmos. Chem.
Phys., 18, 2615–2651, https://doi.org/10.5194/acp-18-2615-2018, 2018. a
Martinsson, P.-G.: Randomized methods for matrix computations, arXiv
preprint, arXiv:1607.01649, 2016. a
Murray, L. T., Jacob, D. J., Logan, J. A., Hudman, R. C.,
and Koshak, W. J.: Optimized regional and interannual variability
of lightning in a global chemical transport model constrained by
LIS/OTD satellite data, J. Geophys. Res.-Atmos., 117, D20307,
https://doi.org/10.1029/2012JD017934, 2012. a
Parrella, J. P., Jacob, D. J., Liang, Q., Zhang, Y., Mickley, L. J., Miller,
B., Evans, M. J., Yang, X., Pyle, J. A., Theys, N., and Van Roozendael, M.:
Tropospheric bromine chemistry: implications for present and pre-industrial
ozone and mercury, Atmos. Chem. Phys., 12, 6723–6740,
https://doi.org/10.5194/acp-12-6723-2012, 2012. a
Paterson, K. G., Sagady, J. L., Hooper, D. L., Bertman, S. B., Carroll,
M. A., and Shepson, P. B.: Analysis of air quality data using positive matrix
factorization, Environ. Sci. Technol., 33, 635–641, 1999. a
Roberts, G., Wooster, M. J., and Lagoudakis, E.: Annual and diurnal african
biomass burning temporal dynamics, Biogeosciences, 6, 849–866,
https://doi.org/10.5194/bg-6-849-2009, 2009. a
Rokhlin, V., Szlam, A., and Tygert, M.: A Randomized Algorithm for Principal
Component Analysis, SIAM J. Matrix Anal. A., 31, 1100–1124, 2010. a
Sherwen, T., Evans, M. J., Sommariva, R., Hollis, L. D. J., Ball, S. M.,
Monks, P. S., Reed, C., Carpenter, L. J., Lee, J. D., Forster, G., Bandy, B.,
Reeves, C. E., and Bloss, W. J.: Effects of halogens on European air-quality,
Faraday Discuss., 200, 75–100, https://doi.org/10.1039/C7FD00026J, 2017.
a
Silva, R. A., West, J. J., Zhang, Y., Anenberg, S. C., Lamarque, J.-F.,
Shindell, D. T., Collins, W. J., Dalsoren, S., Faluvegi, G., Folberth, G.,
Horowitz, L. W., Nagashima, T., Naik, V., Rumbold, S., Skeie, R., Sudo, K.,
Takemura, T., Bergmann, D., Cameron-Smith, P., Cionni, I., Doherty, R. M.,
Eyring, V., Josse, B., MacKenzie, I. A., Plummer, D., Righi, M., Stevenson,
D. S., Strode, S., Szopa, S., and Zeng, G.: Global premature mortality due to
anthropogenic outdoor air pollution and the contribution of past climate
change, Environ. Res. Lett., 8, 034005, https://doi.org/10.1088/1748-9326/8/3/034005,
2013. a
Stevenson, D. S., Dentener, F. J., Schultz, M. G., Ellingsen, K., van Noije,
T. P. C., Wild, O., Zeng, G., Amann, M., Atherton, C. S., Bell, N., Bergmann,
D. J., Bey, I., Butler, T., Cofala, J., Collins, W. J., Derwent, R. G.,
Doherty, R. M., Drevet, J., Eskes, H. J., Fiore, A. M., Gauss, M.,
Hauglustaine, D. A., Horowitz, L. W., Isaksen, I. S. A., Krol, M. C.,
Lamarque, J.-F., Lawrence, M. G., Montanaro, V., Müller, J.-F., Pitari,
G., Prather, M. J., Pyle, J. A., Rast, S., Rodriguez, J. M., Sanderson,
M. G., Savage, N. H., Shindell, D. T., Strahan, S. E., Sudo, K., and Szopa,
S.: Multimodel ensemble simulations of present-day and near-future
tropospheric ozone, J. Geophys. Res., 111, D08301,
https://doi.org/10.1029/2005JD006338, 2006. a
Trendafilov, N., Jolliffe, I. T., and Uddin, M.: A modified principal
component technique based on the LASSO, J. Comput. Graph. Stat., 12,
531–547, 2003. a
Velagar, M.: Scalable Diagnostics, available at:
https://github.com/ mvelegar/ScalableDiagnostics, last access: 15 April 2019. a
Voronin, S. and Martinsson, P.-G.: RSVDPACK: An implementation of randomized
algorithms for computing the singular value, interpolative, and CUR
decompositions of matrices on multi-core and GPU architectures, arXiv
preprint, arXiv:1502.05366, 2015. a
Xie, Y.-L., Hopke, P. K., Paatero, P., Barrie, L. A., and Li, S.-M.:
Identification of Source Nature and Seasonal Variations of Arctic Aerosol
bypositive matrix factorization, J. Atmos. Sci., 56, 249–260, 1999. a
Zou, H. and Hastie, T.: Regularization and Variable Selection via the Elastic
Net, J. R. Stat. Soc. B, 67, 301–320, 2003. a
Short summary
We introduce a new set of algorithmic tools capable of producing scalable, low-rank decompositions of global spatiotemporal atmospheric chemistry data. By exploiting emerging randomized linear algebra algorithms, a suite of decompositions are proposed that efficiently extract the dominant features from global atmospheric chemistry at longitude, latitude, and elevation with improved interpretability. The algorithms provide a strategy for the global monitoring of atmospheric chemistry.
We introduce a new set of algorithmic tools capable of producing scalable, low-rank...
