Articles | Volume 15, issue 4
Geosci. Model Dev., 15, 1619–1632, 2022
https://doi.org/10.5194/gmd-15-1619-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Geosci. Model Dev., 15, 1619–1632, 2022
https://doi.org/10.5194/gmd-15-1619-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Model description paper
24 Feb 2022
Model description paper
| 24 Feb 2022
Supporting hierarchical soil biogeochemical modeling: version 2 of the Biogeochemical Transport and Reaction model (BeTR-v2)
Jinyun Tang et al.
Related authors
Licheng Liu, Shaoming Xu, Jinyun Tang, Kaiyu Guan, Timothy J. Griffis, Matthew D. Erickson, Alexander L. Frie, Xiaowei Jia, Taegon Kim, Lee T. Miller, Bin Peng, Shaowei Wu, Yufeng Yang, Wang Zhou, Vipin Kumar, and Zhenong Jin
Geosci. Model Dev., 15, 2839–2858, https://doi.org/10.5194/gmd-15-2839-2022, https://doi.org/10.5194/gmd-15-2839-2022, 2022
Short summary
Short summary
By incorporating the domain knowledge into a machine learning model, KGML-ag overcomes the well-known limitations of process-based models due to insufficient representations and constraints, and unlocks the “black box” of machine learning models. Therefore, KGML-ag can outperform existing approaches on capturing the hot moment and complex dynamics of N2O flux. This study will be a critical reference for the new generation of modeling paradigm for biogeochemistry and other geoscience processes.
Fushan Wang, Guangheng Ni, William J. Riley, Jinyun Tang, Dejun Zhu, and Ting Sun
Geosci. Model Dev., 12, 2119–2138, https://doi.org/10.5194/gmd-12-2119-2019, https://doi.org/10.5194/gmd-12-2119-2019, 2019
Short summary
Short summary
The current lake model in the Weather Research and Forecasting system was reported to be insufficient in simulating deep lakes and reservoirs. We thus revised the lake model by improving its spatial discretization scheme, surface property parameterization, diffusivity parameterization, and convection scheme. The revised model was evaluated at a deep reservoir in southwestern China and the results were in good agreement with measurements.
Jin-Yun Tang and William J. Riley
Geosci. Model Dev., 10, 3277–3295, https://doi.org/10.5194/gmd-10-3277-2017, https://doi.org/10.5194/gmd-10-3277-2017, 2017
Short summary
Short summary
We proposed the SUPECA kinetics to scale from single biogeochemical reactions to a network of mixed substrates and consumers. The framework for the first time represents single-substrate reactions, two-substrate reactions, and mineral surface sorption reactions in a scaling consistent manner. This new theory is theoretically solid and outperforms existing theories, particularly for substrate-limiting systems. The test with aerobic soil respiration showed its strengths for pragmatic application.
Fa Li, Qing Zhu, William J. Riley, Lei Zhao, Li Xu, Kunxiaojia Yuan, Min Chen, Huayi Wu, Zhipeng Gui, Jianya Gong, and James T. Randerson
Geosci. Model Dev., 16, 869–884, https://doi.org/10.5194/gmd-16-869-2023, https://doi.org/10.5194/gmd-16-869-2023, 2023
Short summary
Short summary
We developed an interpretable machine learning model to predict sub-seasonal and near-future wildfire-burned area over African and South American regions. We found strong time-lagged controls (up to 6–8 months) of local climate wetness on burned areas. A skillful use of such time-lagged controls in machine learning models results in highly accurate predictions of wildfire-burned areas; this will also help develop relevant early-warning and management systems for tropical wildfires.
Licheng Liu, Shaoming Xu, Jinyun Tang, Kaiyu Guan, Timothy J. Griffis, Matthew D. Erickson, Alexander L. Frie, Xiaowei Jia, Taegon Kim, Lee T. Miller, Bin Peng, Shaowei Wu, Yufeng Yang, Wang Zhou, Vipin Kumar, and Zhenong Jin
Geosci. Model Dev., 15, 2839–2858, https://doi.org/10.5194/gmd-15-2839-2022, https://doi.org/10.5194/gmd-15-2839-2022, 2022
Short summary
Short summary
By incorporating the domain knowledge into a machine learning model, KGML-ag overcomes the well-known limitations of process-based models due to insufficient representations and constraints, and unlocks the “black box” of machine learning models. Therefore, KGML-ag can outperform existing approaches on capturing the hot moment and complex dynamics of N2O flux. This study will be a critical reference for the new generation of modeling paradigm for biogeochemistry and other geoscience processes.
Qing Zhu, Fa Li, William J. Riley, Li Xu, Lei Zhao, Kunxiaojia Yuan, Huayi Wu, Jianya Gong, and James Randerson
Geosci. Model Dev., 15, 1899–1911, https://doi.org/10.5194/gmd-15-1899-2022, https://doi.org/10.5194/gmd-15-1899-2022, 2022
Short summary
Short summary
Wildfire is a devastating Earth system process that burns about 500 million hectares of land each year. It wipes out vegetation including trees, shrubs, and grasses and causes large losses of economic assets. However, modeling the spatial distribution and temporal changes of wildfire activities at a global scale is challenging. This study built a machine-learning-based wildfire surrogate model within an existing Earth system model and achieved high accuracy.
Jing Tao, Qing Zhu, William J. Riley, and Rebecca B. Neumann
The Cryosphere, 15, 5281–5307, https://doi.org/10.5194/tc-15-5281-2021, https://doi.org/10.5194/tc-15-5281-2021, 2021
Short summary
Short summary
We improved the DOE's E3SM land model (ELMv1-ECA) simulations of soil temperature, zero-curtain period durations, cold-season CH4, and CO2 emissions at several Alaskan Arctic tundra sites. We demonstrated that simulated CH4 emissions during zero-curtain periods accounted for more than 50 % of total emissions throughout the entire cold season (Sep to May). We also found that cold-season CO2 emissions largely offset warm-season net uptake currently and showed increasing trends from 1950 to 2017.
Kyle B. Delwiche, Sara Helen Knox, Avni Malhotra, Etienne Fluet-Chouinard, Gavin McNicol, Sarah Feron, Zutao Ouyang, Dario Papale, Carlo Trotta, Eleonora Canfora, You-Wei Cheah, Danielle Christianson, Ma. Carmelita R. Alberto, Pavel Alekseychik, Mika Aurela, Dennis Baldocchi, Sheel Bansal, David P. Billesbach, Gil Bohrer, Rosvel Bracho, Nina Buchmann, David I. Campbell, Gerardo Celis, Jiquan Chen, Weinan Chen, Housen Chu, Higo J. Dalmagro, Sigrid Dengel, Ankur R. Desai, Matteo Detto, Han Dolman, Elke Eichelmann, Eugenie Euskirchen, Daniela Famulari, Kathrin Fuchs, Mathias Goeckede, Sébastien Gogo, Mangaliso J. Gondwe, Jordan P. Goodrich, Pia Gottschalk, Scott L. Graham, Martin Heimann, Manuel Helbig, Carole Helfter, Kyle S. Hemes, Takashi Hirano, David Hollinger, Lukas Hörtnagl, Hiroki Iwata, Adrien Jacotot, Gerald Jurasinski, Minseok Kang, Kuno Kasak, John King, Janina Klatt, Franziska Koebsch, Ken W. Krauss, Derrick Y. F. Lai, Annalea Lohila, Ivan Mammarella, Luca Belelli Marchesini, Giovanni Manca, Jaclyn Hatala Matthes, Trofim Maximov, Lutz Merbold, Bhaskar Mitra, Timothy H. Morin, Eiko Nemitz, Mats B. Nilsson, Shuli Niu, Walter C. Oechel, Patricia Y. Oikawa, Keisuke Ono, Matthias Peichl, Olli Peltola, Michele L. Reba, Andrew D. Richardson, William Riley, Benjamin R. K. Runkle, Youngryel Ryu, Torsten Sachs, Ayaka Sakabe, Camilo Rey Sanchez, Edward A. Schuur, Karina V. R. Schäfer, Oliver Sonnentag, Jed P. Sparks, Ellen Stuart-Haëntjens, Cove Sturtevant, Ryan C. Sullivan, Daphne J. Szutu, Jonathan E. Thom, Margaret S. Torn, Eeva-Stiina Tuittila, Jessica Turner, Masahito Ueyama, Alex C. Valach, Rodrigo Vargas, Andrej Varlagin, Alma Vazquez-Lule, Joseph G. Verfaillie, Timo Vesala, George L. Vourlitis, Eric J. Ward, Christian Wille, Georg Wohlfahrt, Guan Xhuan Wong, Zhen Zhang, Donatella Zona, Lisamarie Windham-Myers, Benjamin Poulter, and Robert B. Jackson
Earth Syst. Sci. Data, 13, 3607–3689, https://doi.org/10.5194/essd-13-3607-2021, https://doi.org/10.5194/essd-13-3607-2021, 2021
Short summary
Short summary
Methane is an important greenhouse gas, yet we lack knowledge about its global emissions and drivers. We present FLUXNET-CH4, a new global collection of methane measurements and a critical resource for the research community. We use FLUXNET-CH4 data to quantify the seasonality of methane emissions from freshwater wetlands, finding that methane seasonality varies strongly with latitude. Our new database and analysis will improve wetland model accuracy and inform greenhouse gas budgets.
Robinson I. Negrón-Juárez, Jennifer A. Holm, Boris Faybishenko, Daniel Magnabosco-Marra, Rosie A. Fisher, Jacquelyn K. Shuman, Alessandro C. de Araujo, William J. Riley, and Jeffrey Q. Chambers
Biogeosciences, 17, 6185–6205, https://doi.org/10.5194/bg-17-6185-2020, https://doi.org/10.5194/bg-17-6185-2020, 2020
Short summary
Short summary
The temporal variability in the Landsat satellite near-infrared (NIR) band captured the dynamics of forest regrowth after disturbances in Central Amazon. This variability was represented by the dynamics of forest regrowth after disturbances were properly represented by the ELM-FATES model (Functionally Assembled Terrestrial Ecosystem Simulator (FATES) in the Energy Exascale Earth System Model (E3SM) Land Model (ELM)).
Kuang-Yu Chang, William J. Riley, Patrick M. Crill, Robert F. Grant, and Scott R. Saleska
Biogeosciences, 17, 5849–5860, https://doi.org/10.5194/bg-17-5849-2020, https://doi.org/10.5194/bg-17-5849-2020, 2020
Short summary
Short summary
Methane (CH4) is a strong greenhouse gas that can accelerate climate change and offset mitigation efforts. A key assumption embedded in many large-scale climate models is that ecosystem CH4 emissions can be estimated by fixed temperature relations. Here, we demonstrate that CH4 emissions cannot be parameterized by emergent temperature response alone due to variability driven by microbial and abiotic interactions. We also provide mechanistic understanding for observed CH4 emission hysteresis.
Haifan Liu, Heng Dai, Jie Niu, Bill X. Hu, Dongwei Gui, Han Qiu, Ming Ye, Xingyuan Chen, Chuanhao Wu, Jin Zhang, and William Riley
Hydrol. Earth Syst. Sci., 24, 4971–4996, https://doi.org/10.5194/hess-24-4971-2020, https://doi.org/10.5194/hess-24-4971-2020, 2020
Short summary
Short summary
It is still challenging to apply the quantitative and comprehensive global sensitivity analysis method to complex large-scale process-based hydrological models because of variant uncertainty sources and high computational cost. This work developed a new tool and demonstrate its implementation to a pilot example for comprehensive global sensitivity analysis of large-scale hydrological modelling. This method is mathematically rigorous and can be applied to other large-scale hydrological models.
Dalei Hao, Ghassem R. Asrar, Yelu Zeng, Qing Zhu, Jianguang Wen, Qing Xiao, and Min Chen
Earth Syst. Sci. Data, 12, 2209–2221, https://doi.org/10.5194/essd-12-2209-2020, https://doi.org/10.5194/essd-12-2209-2020, 2020
Short summary
Short summary
We adopted machine-learning models to generate the first global land products of SW–PAR based on DSCOVR/EPIC data. Our products are consistent with ground-based observations, capture the spatiotemporal patterns well and accurately track substantial diurnal, monthly and seasonal variations in SW–PAR. Our products provide a valuable alternative for solar photovoltaic applications and can be used to improve our understanding of the diurnal cycles of terrestrial water, carbon and energy fluxes.
Marielle Saunois, Ann R. Stavert, Ben Poulter, Philippe Bousquet, Josep G. Canadell, Robert B. Jackson, Peter A. Raymond, Edward J. Dlugokencky, Sander Houweling, Prabir K. Patra, Philippe Ciais, Vivek K. Arora, David Bastviken, Peter Bergamaschi, Donald R. Blake, Gordon Brailsford, Lori Bruhwiler, Kimberly M. Carlson, Mark Carrol, Simona Castaldi, Naveen Chandra, Cyril Crevoisier, Patrick M. Crill, Kristofer Covey, Charles L. Curry, Giuseppe Etiope, Christian Frankenberg, Nicola Gedney, Michaela I. Hegglin, Lena Höglund-Isaksson, Gustaf Hugelius, Misa Ishizawa, Akihiko Ito, Greet Janssens-Maenhout, Katherine M. Jensen, Fortunat Joos, Thomas Kleinen, Paul B. Krummel, Ray L. Langenfelds, Goulven G. Laruelle, Licheng Liu, Toshinobu Machida, Shamil Maksyutov, Kyle C. McDonald, Joe McNorton, Paul A. Miller, Joe R. Melton, Isamu Morino, Jurek Müller, Fabiola Murguia-Flores, Vaishali Naik, Yosuke Niwa, Sergio Noce, Simon O'Doherty, Robert J. Parker, Changhui Peng, Shushi Peng, Glen P. Peters, Catherine Prigent, Ronald Prinn, Michel Ramonet, Pierre Regnier, William J. Riley, Judith A. Rosentreter, Arjo Segers, Isobel J. Simpson, Hao Shi, Steven J. Smith, L. Paul Steele, Brett F. Thornton, Hanqin Tian, Yasunori Tohjima, Francesco N. Tubiello, Aki Tsuruta, Nicolas Viovy, Apostolos Voulgarakis, Thomas S. Weber, Michiel van Weele, Guido R. van der Werf, Ray F. Weiss, Doug Worthy, Debra Wunch, Yi Yin, Yukio Yoshida, Wenxin Zhang, Zhen Zhang, Yuanhong Zhao, Bo Zheng, Qing Zhu, Qiuan Zhu, and Qianlai Zhuang
Earth Syst. Sci. Data, 12, 1561–1623, https://doi.org/10.5194/essd-12-1561-2020, https://doi.org/10.5194/essd-12-1561-2020, 2020
Short summary
Short summary
Understanding and quantifying the global methane (CH4) budget is important for assessing realistic pathways to mitigate climate change. We have established a consortium of multidisciplinary scientists under the umbrella of the Global Carbon Project to synthesize and stimulate new research aimed at improving and regularly updating the global methane budget. This is the second version of the review dedicated to the decadal methane budget, integrating results of top-down and bottom-up estimates.
Haifan Liu, Heng Dai, Jie Niu, Bill X. Hu, Han Qiu, Dongwei Gui, Ming Ye, Xingyuan Chen, Chuanhao Wu, Jin Zhang, and William Riley
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2019-246, https://doi.org/10.5194/hess-2019-246, 2019
Manuscript not accepted for further review
Fushan Wang, Guangheng Ni, William J. Riley, Jinyun Tang, Dejun Zhu, and Ting Sun
Geosci. Model Dev., 12, 2119–2138, https://doi.org/10.5194/gmd-12-2119-2019, https://doi.org/10.5194/gmd-12-2119-2019, 2019
Short summary
Short summary
The current lake model in the Weather Research and Forecasting system was reported to be insufficient in simulating deep lakes and reservoirs. We thus revised the lake model by improving its spatial discretization scheme, surface property parameterization, diffusivity parameterization, and convection scheme. The revised model was evaluated at a deep reservoir in southwestern China and the results were in good agreement with measurements.
Kuang-Yu Chang, William J. Riley, Patrick M. Crill, Robert F. Grant, Virginia I. Rich, and Scott R. Saleska
The Cryosphere, 13, 647–663, https://doi.org/10.5194/tc-13-647-2019, https://doi.org/10.5194/tc-13-647-2019, 2019
Short summary
Short summary
Permafrost peatlands store large amounts of carbon potentially vulnerable to decomposition under changing climate. We estimated effects of climate forcing biases on carbon cycling at a thawing permafrost peatland in subarctic Sweden. Our results indicate that many climate reanalysis products are cold and wet biased in our study region, leading to erroneous active layer depth and carbon budget estimates. Future studies should recognize the effects of climate forcing uncertainty on carbon cycling.
Gautam Bisht, William J. Riley, Glenn E. Hammond, and David M. Lorenzetti
Geosci. Model Dev., 11, 4085–4102, https://doi.org/10.5194/gmd-11-4085-2018, https://doi.org/10.5194/gmd-11-4085-2018, 2018
Short summary
Short summary
Most existing global land surface models used to study impacts of climate change on water resources routinely use different models for near-surface unsaturated soil and the deeper groundwater table. We developed a model that uses a unified treatment of soil hydrologic processes throughout the entire soil column. Using a calibrated drainage parameter, the new model is able to correctly predict deep water table depth as reported in an observationally constrained global dataset.
Xiyan Xu, William J. Riley, Charles D. Koven, and Gensuo Jia
Biogeosciences Discuss., https://doi.org/10.5194/bg-2018-257, https://doi.org/10.5194/bg-2018-257, 2018
Preprint withdrawn
Gautam Bisht, William J. Riley, Haruko M. Wainwright, Baptiste Dafflon, Fengming Yuan, and Vladimir E. Romanovsky
Geosci. Model Dev., 11, 61–76, https://doi.org/10.5194/gmd-11-61-2018, https://doi.org/10.5194/gmd-11-61-2018, 2018
Short summary
Short summary
The land model integrated into the Energy Exascale Earth System Model was extended to include snow redistribution (SR) and lateral subsurface hydrologic and thermal processes. Simulation results at a polygonal tundra site near Barrow, Alaska, showed that inclusion of SR resulted in a better agreement with observations. Excluding lateral subsurface processes had a small impact on mean states but caused a large overestimation of spatial variability in soil moisture and temperature.
Gautam Bisht, Maoyi Huang, Tian Zhou, Xingyuan Chen, Heng Dai, Glenn E. Hammond, William J. Riley, Janelle L. Downs, Ying Liu, and John M. Zachara
Geosci. Model Dev., 10, 4539–4562, https://doi.org/10.5194/gmd-10-4539-2017, https://doi.org/10.5194/gmd-10-4539-2017, 2017
Short summary
Short summary
A fully coupled three-dimensional surface and subsurface land model, CP v1.0, was developed to simulate three-way interactions among river water, groundwater, and land surface processes. The coupled model can be used for improving mechanistic understanding of ecosystem functioning and biogeochemical cycling along river corridors under historical and future hydroclimatic changes. The dataset presented in this study can also serve as a good benchmarking case for testing other integrated models.
Marielle Saunois, Philippe Bousquet, Ben Poulter, Anna Peregon, Philippe Ciais, Josep G. Canadell, Edward J. Dlugokencky, Giuseppe Etiope, David Bastviken, Sander Houweling, Greet Janssens-Maenhout, Francesco N. Tubiello, Simona Castaldi, Robert B. Jackson, Mihai Alexe, Vivek K. Arora, David J. Beerling, Peter Bergamaschi, Donald R. Blake, Gordon Brailsford, Lori Bruhwiler, Cyril Crevoisier, Patrick Crill, Kristofer Covey, Christian Frankenberg, Nicola Gedney, Lena Höglund-Isaksson, Misa Ishizawa, Akihiko Ito, Fortunat Joos, Heon-Sook Kim, Thomas Kleinen, Paul Krummel, Jean-François Lamarque, Ray Langenfelds, Robin Locatelli, Toshinobu Machida, Shamil Maksyutov, Joe R. Melton, Isamu Morino, Vaishali Naik, Simon O'Doherty, Frans-Jan W. Parmentier, Prabir K. Patra, Changhui Peng, Shushi Peng, Glen P. Peters, Isabelle Pison, Ronald Prinn, Michel Ramonet, William J. Riley, Makoto Saito, Monia Santini, Ronny Schroeder, Isobel J. Simpson, Renato Spahni, Atsushi Takizawa, Brett F. Thornton, Hanqin Tian, Yasunori Tohjima, Nicolas Viovy, Apostolos Voulgarakis, Ray Weiss, David J. Wilton, Andy Wiltshire, Doug Worthy, Debra Wunch, Xiyan Xu, Yukio Yoshida, Bowen Zhang, Zhen Zhang, and Qiuan Zhu
Atmos. Chem. Phys., 17, 11135–11161, https://doi.org/10.5194/acp-17-11135-2017, https://doi.org/10.5194/acp-17-11135-2017, 2017
Short summary
Short summary
Following the Global Methane Budget 2000–2012 published in Saunois et al. (2016), we use the same dataset of bottom-up and top-down approaches to discuss the variations in methane emissions over the period 2000–2012. The changes in emissions are discussed both in terms of trends and quasi-decadal changes. The ensemble gathered here allows us to synthesise the robust changes in terms of regional and sectorial contributions to the increasing methane emissions.
Jin-Yun Tang and William J. Riley
Geosci. Model Dev., 10, 3277–3295, https://doi.org/10.5194/gmd-10-3277-2017, https://doi.org/10.5194/gmd-10-3277-2017, 2017
Short summary
Short summary
We proposed the SUPECA kinetics to scale from single biogeochemical reactions to a network of mixed substrates and consumers. The framework for the first time represents single-substrate reactions, two-substrate reactions, and mineral surface sorption reactions in a scaling consistent manner. This new theory is theoretically solid and outperforms existing theories, particularly for substrate-limiting systems. The test with aerobic soil respiration showed its strengths for pragmatic application.
Sina Muster, Kurt Roth, Moritz Langer, Stephan Lange, Fabio Cresto Aleina, Annett Bartsch, Anne Morgenstern, Guido Grosse, Benjamin Jones, A. Britta K. Sannel, Ylva Sjöberg, Frank Günther, Christian Andresen, Alexandra Veremeeva, Prajna R. Lindgren, Frédéric Bouchard, Mark J. Lara, Daniel Fortier, Simon Charbonneau, Tarmo A. Virtanen, Gustaf Hugelius, Juri Palmtag, Matthias B. Siewert, William J. Riley, Charles D. Koven, and Julia Boike
Earth Syst. Sci. Data, 9, 317–348, https://doi.org/10.5194/essd-9-317-2017, https://doi.org/10.5194/essd-9-317-2017, 2017
Short summary
Short summary
Waterbodies are abundant in Arctic permafrost lowlands. Most waterbodies are ponds with a surface area smaller than 100 x 100 m. The Permafrost Region Pond and Lake Database (PeRL) for the first time maps ponds as small as 10 x 10 m. PeRL maps can be used to document changes both by comparing them to historical and future imagery. The distribution of waterbodies in the Arctic is important to know in order to manage resources in the Arctic and to improve climate predictions in the Arctic.
Kathrin M. Keller, Sebastian Lienert, Anil Bozbiyik, Thomas F. Stocker, Olga V. Churakova (Sidorova), David C. Frank, Stefan Klesse, Charles D. Koven, Markus Leuenberger, William J. Riley, Matthias Saurer, Rolf Siegwolf, Rosemarie B. Weigt, and Fortunat Joos
Biogeosciences, 14, 2641–2673, https://doi.org/10.5194/bg-14-2641-2017, https://doi.org/10.5194/bg-14-2641-2017, 2017
Marielle Saunois, Philippe Bousquet, Ben Poulter, Anna Peregon, Philippe Ciais, Josep G. Canadell, Edward J. Dlugokencky, Giuseppe Etiope, David Bastviken, Sander Houweling, Greet Janssens-Maenhout, Francesco N. Tubiello, Simona Castaldi, Robert B. Jackson, Mihai Alexe, Vivek K. Arora, David J. Beerling, Peter Bergamaschi, Donald R. Blake, Gordon Brailsford, Victor Brovkin, Lori Bruhwiler, Cyril Crevoisier, Patrick Crill, Kristofer Covey, Charles Curry, Christian Frankenberg, Nicola Gedney, Lena Höglund-Isaksson, Misa Ishizawa, Akihiko Ito, Fortunat Joos, Heon-Sook Kim, Thomas Kleinen, Paul Krummel, Jean-François Lamarque, Ray Langenfelds, Robin Locatelli, Toshinobu Machida, Shamil Maksyutov, Kyle C. McDonald, Julia Marshall, Joe R. Melton, Isamu Morino, Vaishali Naik, Simon O'Doherty, Frans-Jan W. Parmentier, Prabir K. Patra, Changhui Peng, Shushi Peng, Glen P. Peters, Isabelle Pison, Catherine Prigent, Ronald Prinn, Michel Ramonet, William J. Riley, Makoto Saito, Monia Santini, Ronny Schroeder, Isobel J. Simpson, Renato Spahni, Paul Steele, Atsushi Takizawa, Brett F. Thornton, Hanqin Tian, Yasunori Tohjima, Nicolas Viovy, Apostolos Voulgarakis, Michiel van Weele, Guido R. van der Werf, Ray Weiss, Christine Wiedinmyer, David J. Wilton, Andy Wiltshire, Doug Worthy, Debra Wunch, Xiyan Xu, Yukio Yoshida, Bowen Zhang, Zhen Zhang, and Qiuan Zhu
Earth Syst. Sci. Data, 8, 697–751, https://doi.org/10.5194/essd-8-697-2016, https://doi.org/10.5194/essd-8-697-2016, 2016
Short summary
Short summary
An accurate assessment of the methane budget is important to understand the atmospheric methane concentrations and trends and to provide realistic pathways for climate change mitigation. The various and diffuse sources of methane as well and its oxidation by a very short lifetime radical challenge this assessment. We quantify the methane sources and sinks as well as their uncertainties based on both bottom-up and top-down approaches provided by a broad international scientific community.
Xiyan Xu, William J. Riley, Charles D. Koven, Dave P. Billesbach, Rachel Y.-W. Chang, Róisín Commane, Eugénie S. Euskirchen, Sean Hartery, Yoshinobu Harazono, Hiroki Iwata, Kyle C. McDonald, Charles E. Miller, Walter C. Oechel, Benjamin Poulter, Naama Raz-Yaseef, Colm Sweeney, Margaret Torn, Steven C. Wofsy, Zhen Zhang, and Donatella Zona
Biogeosciences, 13, 5043–5056, https://doi.org/10.5194/bg-13-5043-2016, https://doi.org/10.5194/bg-13-5043-2016, 2016
Short summary
Short summary
Wetlands are the largest global natural methane source. Peat-rich bogs and fens lying between 50°N and 70°N contribute 10–30% to this source. The predictive capability of the seasonal methane cycle can directly affect the estimation of global methane budget. We present multiscale methane seasonal emission by observations and modeling and find that the uncertainties in predicting the seasonal methane emissions are from the wetland extent, cold-season CH4 production and CH4 transport processes.
Xiaofeng Xu, Fengming Yuan, Paul J. Hanson, Stan D. Wullschleger, Peter E. Thornton, William J. Riley, Xia Song, David E. Graham, Changchun Song, and Hanqin Tian
Biogeosciences, 13, 3735–3755, https://doi.org/10.5194/bg-13-3735-2016, https://doi.org/10.5194/bg-13-3735-2016, 2016
Short summary
Short summary
Accurately projecting future climate change requires a good methane modeling. However, how good the current models are and what are the key improvements needed remain unclear. This paper reviews the 40 published methane models to characterize the strengths and weakness of current methane models and further lay out the roadmap for future model improvements.
Jinyun Tang and William J. Riley
Biogeosciences Discuss., https://doi.org/10.5194/bg-2016-233, https://doi.org/10.5194/bg-2016-233, 2016
Preprint retracted
J. Y. Tang and W. J. Riley
Biogeosciences, 13, 723–735, https://doi.org/10.5194/bg-13-723-2016, https://doi.org/10.5194/bg-13-723-2016, 2016
Short summary
Short summary
We present a generic flux-limiting approach to simultaneously handle the availability limitation from many substrates, a problem common in all biogeochemical models. Our approach does not have the ordering problem like a few existing ad hoc approaches, and is straightforward to implement. Our results imply that significant uncertainties could have occurred in many biogeochemical models because of the improper handling of the substrate co-limitation problem.
Q. Zhu, W. J. Riley, J. Tang, and C. D. Koven
Biogeosciences, 13, 341–363, https://doi.org/10.5194/bg-13-341-2016, https://doi.org/10.5194/bg-13-341-2016, 2016
Short summary
Short summary
Here we develop, calibrate, and test a nutrient competition model that accounts for multiple soil nutrients interacting with multiple biotic and abiotic consumers based on enzyme kinetics theory. Our model provides an ecologically consistent representation of nutrient competition appropriate for land biogeochemical models integrated in Earth system models.
C. D. Koven, J. Q. Chambers, K. Georgiou, R. Knox, R. Negron-Juarez, W. J. Riley, V. K. Arora, V. Brovkin, P. Friedlingstein, and C. D. Jones
Biogeosciences, 12, 5211–5228, https://doi.org/10.5194/bg-12-5211-2015, https://doi.org/10.5194/bg-12-5211-2015, 2015
Short summary
Short summary
Terrestrial carbon feedbacks are a large uncertainty in climate change. We separate modeled feedback responses into those governed by changed carbon inputs (productivity) and changed outputs (turnover). The disaggregated responses show that both are important in controlling inter-model uncertainty. Interactions between productivity and turnover are also important, and research must focus on these interactions for more accurate projections of carbon cycle feedbacks.
U. Mishra and W. J. Riley
Biogeosciences, 12, 3993–4004, https://doi.org/10.5194/bg-12-3993-2015, https://doi.org/10.5194/bg-12-3993-2015, 2015
T. J. Bohn, J. R. Melton, A. Ito, T. Kleinen, R. Spahni, B. D. Stocker, B. Zhang, X. Zhu, R. Schroeder, M. V. Glagolev, S. Maksyutov, V. Brovkin, G. Chen, S. N. Denisov, A. V. Eliseev, A. Gallego-Sala, K. C. McDonald, M.A. Rawlins, W. J. Riley, Z. M. Subin, H. Tian, Q. Zhuang, and J. O. Kaplan
Biogeosciences, 12, 3321–3349, https://doi.org/10.5194/bg-12-3321-2015, https://doi.org/10.5194/bg-12-3321-2015, 2015
Short summary
Short summary
We evaluated 21 forward models and 5 inversions over western Siberia in terms of CH4 emissions and simulated wetland areas and compared these results to an intensive in situ CH4 flux data set, several wetland maps, and two satellite inundation products. In addition to assembling a definitive collection of methane emissions estimates for the region, we were able to identify the types of wetland maps and model features necessary for accurate simulations of high-latitude wetlands.
N. J. Bouskill, W. J. Riley, and J. Y. Tang
Biogeosciences, 11, 6969–6983, https://doi.org/10.5194/bg-11-6969-2014, https://doi.org/10.5194/bg-11-6969-2014, 2014
G. Bisht and W. J. Riley
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hessd-11-12833-2014, https://doi.org/10.5194/hessd-11-12833-2014, 2014
Revised manuscript has not been submitted
G. S. H. Pau, G. Bisht, and W. J. Riley
Geosci. Model Dev., 7, 2091–2105, https://doi.org/10.5194/gmd-7-2091-2014, https://doi.org/10.5194/gmd-7-2091-2014, 2014
J. Y. Tang and W. J. Riley
Biogeosciences, 11, 3721–3728, https://doi.org/10.5194/bg-11-3721-2014, https://doi.org/10.5194/bg-11-3721-2014, 2014
W. J. Riley, F. Maggi, M. Kleber, M. S. Torn, J. Y. Tang, D. Dwivedi, and N. Guerry
Geosci. Model Dev., 7, 1335–1355, https://doi.org/10.5194/gmd-7-1335-2014, https://doi.org/10.5194/gmd-7-1335-2014, 2014
W. J. Riley and C. Shen
Hydrol. Earth Syst. Sci., 18, 2463–2483, https://doi.org/10.5194/hess-18-2463-2014, https://doi.org/10.5194/hess-18-2463-2014, 2014
I. N. Williams, W. J. Riley, M. S. Torn, S. C. Biraud, and M. L. Fischer
Atmos. Chem. Phys., 14, 1571–1585, https://doi.org/10.5194/acp-14-1571-2014, https://doi.org/10.5194/acp-14-1571-2014, 2014
J. Y. Tang and W. J. Riley
Biogeosciences, 10, 8329–8351, https://doi.org/10.5194/bg-10-8329-2013, https://doi.org/10.5194/bg-10-8329-2013, 2013
C. D. Koven, W. J. Riley, Z. M. Subin, J. Y. Tang, M. S. Torn, W. D. Collins, G. B. Bonan, D. M. Lawrence, and S. C. Swenson
Biogeosciences, 10, 7109–7131, https://doi.org/10.5194/bg-10-7109-2013, https://doi.org/10.5194/bg-10-7109-2013, 2013
P. C. Stoy, M. C. Dietze, A. D. Richardson, R. Vargas, A. G. Barr, R. S. Anderson, M. A. Arain, I. T. Baker, T. A. Black, J. M. Chen, R. B. Cook, C. M. Gough, R. F. Grant, D. Y. Hollinger, R. C. Izaurralde, C. J. Kucharik, P. Lafleur, B. E. Law, S. Liu, E. Lokupitiya, Y. Luo, J. W. Munger, C. Peng, B. Poulter, D. T. Price, D. M. Ricciuto, W. J. Riley, A. K. Sahoo, K. Schaefer, C. R. Schwalm, H. Tian, H. Verbeeck, and E. Weng
Biogeosciences, 10, 6893–6909, https://doi.org/10.5194/bg-10-6893-2013, https://doi.org/10.5194/bg-10-6893-2013, 2013
J. H. Shim, H. H. Powers, C. W. Meyer, A. Knohl, T. E. Dawson, W. J. Riley, W. T. Pockman, and N. McDowell
Biogeosciences, 10, 4937–4956, https://doi.org/10.5194/bg-10-4937-2013, https://doi.org/10.5194/bg-10-4937-2013, 2013
R. Wania, J. R. Melton, E. L. Hodson, B. Poulter, B. Ringeval, R. Spahni, T. Bohn, C. A. Avis, G. Chen, A. V. Eliseev, P. O. Hopcroft, W. J. Riley, Z. M. Subin, H. Tian, P. M. van Bodegom, T. Kleinen, Z. C. Yu, J. S. Singarayer, S. Zürcher, D. P. Lettenmaier, D. J. Beerling, S. N. Denisov, C. Prigent, F. Papa, and J. O. Kaplan
Geosci. Model Dev., 6, 617–641, https://doi.org/10.5194/gmd-6-617-2013, https://doi.org/10.5194/gmd-6-617-2013, 2013
S. C. Biraud, M. S. Torn, J. R. Smith, C. Sweeney, W. J. Riley, and P. P. Tans
Atmos. Meas. Tech., 6, 751–763, https://doi.org/10.5194/amt-6-751-2013, https://doi.org/10.5194/amt-6-751-2013, 2013
W. J. Riley
Geosci. Model Dev., 6, 345–352, https://doi.org/10.5194/gmd-6-345-2013, https://doi.org/10.5194/gmd-6-345-2013, 2013
J. Y. Tang and W. J. Riley
Hydrol. Earth Syst. Sci., 17, 873–893, https://doi.org/10.5194/hess-17-873-2013, https://doi.org/10.5194/hess-17-873-2013, 2013
J. R. Melton, R. Wania, E. L. Hodson, B. Poulter, B. Ringeval, R. Spahni, T. Bohn, C. A. Avis, D. J. Beerling, G. Chen, A. V. Eliseev, S. N. Denisov, P. O. Hopcroft, D. P. Lettenmaier, W. J. Riley, J. S. Singarayer, Z. M. Subin, H. Tian, S. Zürcher, V. Brovkin, P. M. van Bodegom, T. Kleinen, Z. C. Yu, and J. O. Kaplan
Biogeosciences, 10, 753–788, https://doi.org/10.5194/bg-10-753-2013, https://doi.org/10.5194/bg-10-753-2013, 2013
J. Y. Tang, W. J. Riley, C. D. Koven, and Z. M. Subin
Geosci. Model Dev., 6, 127–140, https://doi.org/10.5194/gmd-6-127-2013, https://doi.org/10.5194/gmd-6-127-2013, 2013
Related subject area
Climate and Earth system modeling
The pseudo-global-warming (PGW) approach: methodology, software package PGW4ERA5 v1.1, validation, and sensitivity analyses
AttentionFire_v1.0: interpretable machine learning fire model for burned-area predictions over tropics
Cell tracking of convective rainfall: sensitivity of climate-change signal to tracking algorithm and cell definition (Cell-TAO v1.0)
ICON-Sapphire: simulating the components of the Earth system and their interactions at kilometer and subkilometer scales
Ocean Modeling with Adaptive REsolution (OMARE; version 1.0) – refactoring the NEMO model (version 4.0.1) with the parallel computing framework of JASMIN – Part 1: Adaptive grid refinement in an idealized double-gyre case
Monthly-scale extended predictions using the atmospheric model coupled with a slab ocean
stoPET v1.0: a stochastic potential evapotranspiration generator for simulation of climate change impacts
URANOS v1.0 – the Ultra Rapid Adaptable Neutron-Only Simulation for Environmental Research
Combining regional mesh refinement with vertically enhanced physics to target marine stratocumulus biases as demonstrated in the Energy Exascale Earth System Model version 1
Evaluation of native Earth system model output with ESMValTool v2.6.0
WRF–ML v1.0: a bridge between WRF v4.3 and machine learning parameterizations and its application to atmospheric radiative transfer
The Euro-Mediterranean Center on Climate Change (CMCC) decadal prediction system
Climate impacts of parameterizing subgrid variation and partitioning of land surface heat fluxes to the atmosphere with the NCAR CESM1.2
Accelerated photosynthesis routine in LPJmL4
Improving scalability of Earth system models through coarse-grained component concurrency – a case study with the ICON v2.6.5 modelling system
Temperature forecasting by deep learning methods
Pathfinder v1.0.1: a Bayesian-inferred simple carbon–climate model to explore climate change scenarios
Inclusion of a cold hardening scheme to represent frost tolerance is essential to model realistic plant hydraulics in the Arctic–boreal zone in CLM5.0-FATES-Hydro
Implementation and evaluation of the GEOS-Chem chemistry module version 13.1.2 within the Community Earth System Model v2.1
Assessment of JSBACHv4.30 as a land component of ICON-ESM-V1 in comparison to its predecessor JSBACHv3.2 of MPI-ESM1.2
Global biomass burning fuel consumption and emissions at 500 m spatial resolution based on the Global Fire Emissions Database (GFED)
Impact of increased resolution on the representation of the Canary upwelling system in climate models
Assessing Responses and Impacts of Solar climate intervention on the Earth system with stratospheric aerosol injection (ARISE-SAI): protocol and initial results from the first simulations
Introducing the VIIRS-based Fire Emission Inventory version 0 (VFEIv0)
Impact of physical parameterizations on wind simulation with WRF V3.9.1.1 under stable conditions at planetary boundary layer gray-zone resolution: a case study over the coastal regions of North China
Advancing precipitation prediction using a new-generation storm-resolving model framework – SIMA-MPAS (V1.0): a case study over the western United States
SURFER v2.0: a flexible and simple model linking anthropogenic CO2 emissions and solar radiation modification to ocean acidification and sea level rise
Analysis of Systematic Biases in Tropospheric Hydrostatic Delay Models and Construction of Correction Model
A new bootstrap technique to quantify uncertainty in estimates of ground surface temperature and ground heat flux histories from geothermal data
Modeling the topographic influence on aboveground biomass using a coupled model of hillslope hydrology and ecosystem dynamics
Impacts of the ice-particle size distribution shape parameter on climate simulations with the Community Atmosphere Model Version 6 (CAM6)
A modeling framework to understand historical and projected ocean climate change in large coupled ensembles
TriCCo v1.1.0 – a cubulation-based method for computing connected components on triangular grids
Estimation of missing building height in OpenStreetMap data: a French case study using GeoClimate 0.0.1
The Moist Quasi-Geostrophic Coupled Model: MQ-GCM 2.0
Transport parameterization of the Polar SWIFT model (version 2)
Analog data assimilation for the selection of suitable general circulation models
Uncertainty and sensitivity analysis for probabilistic weather and climate-risk modelling: an implementation in CLIMADA v.3.1.0
Grid refinement in ICON v2.6.4
Simulating marine neodymium isotope distributions using ND v1.0 coupled to the ocean component of the FAMOUS-MOSES1 climate model: sensitivities to reversible scavenging efficiency and benthic source distributions
Classification of tropical cyclone containing images using a convolutional neural network: performance and sensitivity to the learning dataset
The ICON-A model for direct QBO simulations on GPUs (version icon-cscs:baf28a514)
Further improvement and evaluation of nudging in the E3SM Atmosphere Model version 1 (EAMv1): simulations of the mean climate, weather events, and anthropogenic aerosol effects
HORAYZON v1.2: an efficient and flexible ray-tracing algorithm to compute horizon and sky view factor
UKESM1.1: Development and evaluation of an updated configuration of the UK Earth System Model
LPJ-GUESS/LSMv1.0: a next-generation land surface model with high ecological realism
Downscaling multi-model climate projection ensembles with deep learning (DeepESD): contribution to CORDEX EUR-44
Intercomparison of four algorithms for detecting tropical cyclones using ERA5
Inland lake temperature initialization via coupled cycling with atmospheric data assimilation
wavetrisk-2.1: an adaptive dynamical core for ocean modelling
Roman Brogli, Christoph Heim, Jonas Mensch, Silje Lund Sørland, and Christoph Schär
Geosci. Model Dev., 16, 907–926, https://doi.org/10.5194/gmd-16-907-2023, https://doi.org/10.5194/gmd-16-907-2023, 2023
Short summary
Short summary
The pseudo-global-warming (PGW) approach is a downscaling methodology that imposes the large-scale GCM-based climate change signal on the boundary conditions of a regional climate simulation. It offers several benefits in comparison to conventional downscaling. We present a detailed description of the methodology, provide companion software to facilitate the preparation of PGW simulations, and present validation and sensitivity studies.
Fa Li, Qing Zhu, William J. Riley, Lei Zhao, Li Xu, Kunxiaojia Yuan, Min Chen, Huayi Wu, Zhipeng Gui, Jianya Gong, and James T. Randerson
Geosci. Model Dev., 16, 869–884, https://doi.org/10.5194/gmd-16-869-2023, https://doi.org/10.5194/gmd-16-869-2023, 2023
Short summary
Short summary
We developed an interpretable machine learning model to predict sub-seasonal and near-future wildfire-burned area over African and South American regions. We found strong time-lagged controls (up to 6–8 months) of local climate wetness on burned areas. A skillful use of such time-lagged controls in machine learning models results in highly accurate predictions of wildfire-burned areas; this will also help develop relevant early-warning and management systems for tropical wildfires.
Edmund P. Meredith, Uwe Ulbrich, and Henning W. Rust
Geosci. Model Dev., 16, 851–867, https://doi.org/10.5194/gmd-16-851-2023, https://doi.org/10.5194/gmd-16-851-2023, 2023
Short summary
Short summary
Cell-tracking algorithms allow for the study of properties of a convective cell across its lifetime and, in particular, how these respond to climate change. We investigated whether the design of the algorithm can affect the magnitude of the climate-change signal. The algorithm's criteria for identifying a cell were found to have a strong impact on the warming response. The sensitivity of the warming response to different algorithm settings and cell types should thus be fully explored.
Cathy Hohenegger, Peter Korn, Leonidas Linardakis, René Redler, Reiner Schnur, Panagiotis Adamidis, Jiawei Bao, Swantje Bastin, Milad Behravesh, Martin Bergemann, Joachim Biercamp, Hendryk Bockelmann, Renate Brokopf, Nils Brüggemann, Lucas Casaroli, Fatemeh Chegini, George Datseris, Monika Esch, Geet George, Marco Giorgetta, Oliver Gutjahr, Helmuth Haak, Moritz Hanke, Tatiana Ilyina, Thomas Jahns, Johann Jungclaus, Marcel Kern, Daniel Klocke, Lukas Kluft, Tobias Kölling, Luis Kornblueh, Sergey Kosukhin, Clarissa Kroll, Junhong Lee, Thorsten Mauritsen, Carolin Mehlmann, Theresa Mieslinger, Ann Kristin Naumann, Laura Paccini, Angel Peinado, Divya Sri Praturi, Dian Putrasahan, Sebastian Rast, Thomas Riddick, Niklas Roeber, Hauke Schmidt, Uwe Schulzweida, Florian Schütte, Hans Segura, Radomyra Shevchenko, Vikram Singh, Mia Specht, Claudia Christine Stephan, Jin-Song von Storch, Raphaela Vogel, Christian Wengel, Marius Winkler, Florian Ziemen, Jochem Marotzke, and Bjorn Stevens
Geosci. Model Dev., 16, 779–811, https://doi.org/10.5194/gmd-16-779-2023, https://doi.org/10.5194/gmd-16-779-2023, 2023
Short summary
Short summary
Models of the Earth system used to understand climate and predict its change typically employ a grid spacing of about 100 km. Yet, many atmospheric and oceanic processes occur on much smaller scales. In this study, we present a new model configuration designed for the simulation of the components of the Earth system and their interactions at kilometer and smaller scales, allowing an explicit representation of the main drivers of the flow of energy and matter by solving the underlying equations.
Yan Zhang, Xuantong Wang, Yuhao Sun, Chenhui Ning, Shiming Xu, Hengbin An, Dehong Tang, Hong Guo, Hao Yang, Ye Pu, Bo Jiang, and Bin Wang
Geosci. Model Dev., 16, 679–704, https://doi.org/10.5194/gmd-16-679-2023, https://doi.org/10.5194/gmd-16-679-2023, 2023
Short summary
Short summary
We construct a new ocean model, OMARE, that can carry out multi-scale ocean simulation with adaptive mesh refinement. OMARE is based on the refactorization of NEMO with a third-party, high-performance piece of middleware. We report the porting process and experiments of an idealized western-boundary current system. The new model simulates turbulent and temporally varying mesoscale and submesoscale processes via adaptive refinement. Related topics and future work with OMARE are also discussed.
Zhenming Wang, Shaoqing Zhang, Yishuai Jin, Yinglai Jia, Yangyang Yu, Yang Gao, Xiaolin Yu, Mingkui Li, Xiaopei Lin, and Lixin Wu
Geosci. Model Dev., 16, 705–717, https://doi.org/10.5194/gmd-16-705-2023, https://doi.org/10.5194/gmd-16-705-2023, 2023
Short summary
Short summary
To improve the numerical model predictability of monthly extended-range scales, we use the simplified slab ocean model (SOM) to restrict the complicated sea surface temperature (SST) bias from a 3-D dynamical ocean model. As for SST prediction, whether in space or time, the WRF-SOM is verified to have better performance than the WRF-ROMS, which has a significant impact on the atmosphere. For extreme weather events such as typhoons, the predictions of WRF-SOM are in good agreement with WRF-ROMS.
Dagmawi Teklu Asfaw, Michael Bliss Singer, Rafael Rosolem, David MacLeod, Mark Cuthbert, Edisson Quichimbo Miguitama, Manuel F. Rios Gaona, and Katerina Michaelides
Geosci. Model Dev., 16, 557–571, https://doi.org/10.5194/gmd-16-557-2023, https://doi.org/10.5194/gmd-16-557-2023, 2023
Short summary
Short summary
stoPET is a new stochastic potential evapotranspiration (PET) generator for the globe at hourly resolution. Many stochastic weather generators are used to generate stochastic rainfall time series; however, no such model exists for stochastically generating plausible PET time series. As such, stoPET represents a significant methodological advance. stoPET generate many realizations of PET to conduct climate studies related to the water balance, agriculture, water resources, and ecology.
Markus Köhli, Martin Schrön, Steffen Zacharias, and Ulrich Schmidt
Geosci. Model Dev., 16, 449–477, https://doi.org/10.5194/gmd-16-449-2023, https://doi.org/10.5194/gmd-16-449-2023, 2023
Short summary
Short summary
In the last decades, Monte Carlo codes were often consulted to study neutrons near the surface. As an alternative for the growing community of CRNS, we developed URANOS. The main model features are tracking of particle histories from creation to detection, detector representations as layers or geometric shapes, a voxel-based geometry model, and material setup based on color codes in ASCII matrices or bitmap images. The entire software is developed in C++ and features a graphical user interface.
Peter A. Bogenschutz, Hsiang-He Lee, Qi Tang, and Takanobu Yamaguchi
Geosci. Model Dev., 16, 335–352, https://doi.org/10.5194/gmd-16-335-2023, https://doi.org/10.5194/gmd-16-335-2023, 2023
Short summary
Short summary
Models that are used to simulate and predict climate often have trouble representing specific cloud types, such as stratocumulus, that are particularly thin in the vertical direction. It has been found that increasing the model resolution can help improve this problem. In this paper, we develop a novel framework that increases the horizontal and vertical resolutions only for areas of the globe that contain stratocumulus, hence reducing the model runtime while providing better results.
Manuel Schlund, Birgit Hassler, Axel Lauer, Bouwe Andela, Patrick Jöckel, Rémi Kazeroni, Saskia Loosveldt Tomas, Brian Medeiros, Valeriu Predoi, Stéphane Sénési, Jérôme Servonnat, Tobias Stacke, Javier Vegas-Regidor, Klaus Zimmermann, and Veronika Eyring
Geosci. Model Dev., 16, 315–333, https://doi.org/10.5194/gmd-16-315-2023, https://doi.org/10.5194/gmd-16-315-2023, 2023
Short summary
Short summary
The Earth System Model Evaluation Tool (ESMValTool) is a community diagnostics and performance metrics tool for routine evaluation of Earth system models. Originally, ESMValTool was designed to process reformatted output provided by large model intercomparison projects like the Coupled Model Intercomparison Project (CMIP). Here, we describe a new extension of ESMValTool that allows for reading and processing native climate model output, i.e., data that have not been reformatted before.
Xiaohui Zhong, Zhijian Ma, Yichen Yao, Lifei Xu, Yuan Wu, and Zhibin Wang
Geosci. Model Dev., 16, 199–209, https://doi.org/10.5194/gmd-16-199-2023, https://doi.org/10.5194/gmd-16-199-2023, 2023
Short summary
Short summary
More and more researchers use deep learning models to replace physics-based parameterizations to accelerate weather simulations. However, embedding the ML models within the weather models is difficult as they are implemented in different languages. This work proposes a coupling framework to allow ML-based parameterizations to be coupled with the Weather Research and Forecasting (WRF) model. We also demonstrate using the coupler to couple the ML-based radiation schemes with the WRF model.
Dario Nicolì, Alessio Bellucci, Paolo Ruggieri, Panos J. Athanasiadis, Stefano Materia, Daniele Peano, Giusy Fedele, Riccardo Hénin, and Silvio Gualdi
Geosci. Model Dev., 16, 179–197, https://doi.org/10.5194/gmd-16-179-2023, https://doi.org/10.5194/gmd-16-179-2023, 2023
Short summary
Short summary
Decadal climate predictions, obtained by constraining the initial condition of a dynamical model through a truthful estimate of the observed climate state, provide an accurate assessment of the near-term climate and are useful for informing decision-makers on future climate-related risks. The predictive skill for key variables is assessed from the operational decadal prediction system compared with non-initialized historical simulations so as to quantify the added value of initialization.
Ming Yin, Yilun Han, Yong Wang, Wenqi Sun, Jianbo Deng, Daoming Wei, Ying Kong, and Bin Wang
Geosci. Model Dev., 16, 135–156, https://doi.org/10.5194/gmd-16-135-2023, https://doi.org/10.5194/gmd-16-135-2023, 2023
Short summary
Short summary
All global climate models (GCMs) use the grid-averaged surface heat fluxes to drive the atmosphere, and thus their horizontal variations within the grid cell are averaged out. In this regard, a novel scheme considering the variation and partitioning of the surface heat fluxes within the grid cell is developed. The scheme reduces the long-standing rainfall biases on the southern and eastern margins of the Tibetan Plateau. The performance of key variables at the global scale is also evaluated.
Jenny Niebsch, Werner von Bloh, Kirsten Thonicke, and Ronny Ramlau
Geosci. Model Dev., 16, 17–33, https://doi.org/10.5194/gmd-16-17-2023, https://doi.org/10.5194/gmd-16-17-2023, 2023
Short summary
Short summary
The impacts of climate change require strategies for climate adaptation. Dynamic global vegetation models (DGVMs) are used to study the effects of multiple processes in the biosphere under climate change. There is a demand for a better computational performance of the models. In this paper, the photosynthesis model in the Lund–Potsdam–Jena managed Land DGVM (4.0.002) was examined. We found a better numerical solution of a nonlinear equation. A significant run time reduction was possible.
Leonidas Linardakis, Irene Stemmler, Moritz Hanke, Lennart Ramme, Fatemeh Chegini, Tatiana Ilyina, and Peter Korn
Geosci. Model Dev., 15, 9157–9176, https://doi.org/10.5194/gmd-15-9157-2022, https://doi.org/10.5194/gmd-15-9157-2022, 2022
Short summary
Short summary
In Earth system modelling, we are facing the challenge of making efficient use of very large machines, with millions of cores. To meet this challenge we will need to employ multi-level and multi-dimensional parallelism. Component concurrency, being a function parallel technique, offers an additional dimension to the traditional data-parallel approaches. In this paper we examine the behaviour of component concurrency and identify the conditions for its optimal application.
Bing Gong, Michael Langguth, Yan Ji, Amirpasha Mozaffari, Scarlet Stadtler, Karim Mache, and Martin G. Schultz
Geosci. Model Dev., 15, 8931–8956, https://doi.org/10.5194/gmd-15-8931-2022, https://doi.org/10.5194/gmd-15-8931-2022, 2022
Short summary
Short summary
Inspired by the success of deep learning in various domains, we test the applicability of video prediction methods by generative adversarial network (GAN)-based deep learning to predict the 2 m temperature over Europe. Our video prediction models have skill in predicting the diurnal cycle of 2 m temperature up to 12 h ahead. Complemented by probing the relevance of several model parameters, this study confirms the potential of deep learning in meteorological forecasting applications.
Thomas Bossy, Thomas Gasser, and Philippe Ciais
Geosci. Model Dev., 15, 8831–8868, https://doi.org/10.5194/gmd-15-8831-2022, https://doi.org/10.5194/gmd-15-8831-2022, 2022
Short summary
Short summary
We developed a new simple climate model designed to fill a perceived gap within the existing simple climate models by fulfilling three key requirements: calibration using Bayesian inference, the possibility of coupling with integrated assessment models, and the capacity to explore climate scenarios compatible with limiting climate impacts. Here, we describe the model and its calibration using the latest data from complex CMIP6 models and the IPCC AR6, and we assess its performance.
Marius S. A. Lambert, Hui Tang, Kjetil S. Aas, Frode Stordal, Rosie A. Fisher, Yilin Fang, Junyan Ding, and Frans-Jan W. Parmentier
Geosci. Model Dev., 15, 8809–8829, https://doi.org/10.5194/gmd-15-8809-2022, https://doi.org/10.5194/gmd-15-8809-2022, 2022
Short summary
Short summary
In this study, we implement a hardening mortality scheme into CTSM5.0-FATES-Hydro and evaluate how it impacts plant hydraulics and vegetation growth. Our work shows that the hydraulic modifications prescribed by the hardening scheme are necessary to model realistic vegetation growth in cold climates, in contrast to the default model that simulates almost nonexistent and declining vegetation due to abnormally large water loss through the roots.
Thibaud M. Fritz, Sebastian D. Eastham, Louisa K. Emmons, Haipeng Lin, Elizabeth W. Lundgren, Steve Goldhaber, Steven R. H. Barrett, and Daniel J. Jacob
Geosci. Model Dev., 15, 8669–8704, https://doi.org/10.5194/gmd-15-8669-2022, https://doi.org/10.5194/gmd-15-8669-2022, 2022
Short summary
Short summary
We bring the state-of-the-science chemistry module GEOS-Chem into the Community Earth System Model (CESM). We show that some known differences between results from GEOS-Chem and CESM's CAM-chem chemistry module may be due to the configuration of model meteorology rather than inherent differences in the model chemistry. This is a significant step towards a truly modular Earth system model and allows two strong but currently separate research communities to benefit from each other's advances.
Rainer Schneck, Veronika Gayler, Julia E. M. S. Nabel, Thomas Raddatz, Christian H. Reick, and Reiner Schnur
Geosci. Model Dev., 15, 8581–8611, https://doi.org/10.5194/gmd-15-8581-2022, https://doi.org/10.5194/gmd-15-8581-2022, 2022
Short summary
Short summary
The versions of ICON-A and ICON-Land/JSBACHv4 used for this study constitute the first milestone in the development of the new ICON Earth System Model ICON-ESM. JSBACHv4 is the successor of JSBACHv3, and most of the parameterizations of JSBACHv4 are re-implementations from JSBACHv3. We assess and compare the performance of JSBACHv4 and JSBACHv3. Overall, the JSBACHv4 results are as good as JSBACHv3, but both models reveal the same main shortcomings, e.g. the depiction of the leaf area index.
Dave van Wees, Guido R. van der Werf, James T. Randerson, Brendan M. Rogers, Yang Chen, Sander Veraverbeke, Louis Giglio, and Douglas C. Morton
Geosci. Model Dev., 15, 8411–8437, https://doi.org/10.5194/gmd-15-8411-2022, https://doi.org/10.5194/gmd-15-8411-2022, 2022
Short summary
Short summary
We present a global fire emission model based on the GFED model framework with a spatial resolution of 500 m. The higher resolution allowed for a more detailed representation of spatial heterogeneity in fuels and emissions. Specific modules were developed to model, for example, emissions from fire-related forest loss and belowground burning. Results from the 500 m model were compared to GFED4s, showing that global emissions were relatively similar but that spatial differences were substantial.
Adama Sylla, Emilia Sanchez Gomez, Juliette Mignot, and Jorge López-Parages
Geosci. Model Dev., 15, 8245–8267, https://doi.org/10.5194/gmd-15-8245-2022, https://doi.org/10.5194/gmd-15-8245-2022, 2022
Short summary
Short summary
Increasing model resolution depends on the subdomain of the Canary upwelling considered. In the Iberian Peninsula, the high-resolution (HR) models do not seem to better simulate the upwelling indices, while in Morocco to the Senegalese coast, the HR models show a clear improvement. Thus increasing the resolution of a global climate model does not necessarily have to be the only way to better represent the climate system. There is still much work to be done in terms of physical parameterizations.
Jadwiga H. Richter, Daniele Visioni, Douglas G. MacMartin, David A. Bailey, Nan Rosenbloom, Brian Dobbins, Walker R. Lee, Mari Tye, and Jean-Francois Lamarque
Geosci. Model Dev., 15, 8221–8243, https://doi.org/10.5194/gmd-15-8221-2022, https://doi.org/10.5194/gmd-15-8221-2022, 2022
Short summary
Short summary
Solar climate intervention using stratospheric aerosol injection is a proposed method of reducing global mean temperatures to reduce the worst consequences of climate change. We present a new modeling protocol aimed at simulating a plausible deployment of stratospheric aerosol injection and reproducibility of simulations using other Earth system models: Assessing Responses and Impacts of Solar climate intervention on the Earth system with stratospheric aerosol injection (ARISE-SAI).
Gonzalo A. Ferrada, Meng Zhou, Jun Wang, Alexei Lyapustin, Yujie Wang, Saulo R. Freitas, and Gregory R. Carmichael
Geosci. Model Dev., 15, 8085–8109, https://doi.org/10.5194/gmd-15-8085-2022, https://doi.org/10.5194/gmd-15-8085-2022, 2022
Short summary
Short summary
The smoke from fires is composed of different compounds that interact with the atmosphere and can create poor air-quality episodes. Here, we present a new fire inventory based on satellite observations from the Visible Infrared Imaging Radiometer Suite (VIIRS). We named this inventory the VIIRS-based Fire Emission Inventory (VFEI). Advantages of VFEI are its high resolution (~500 m) and that it provides information for many species. VFEI is publicly available and has provided data since 2012.
Entao Yu, Rui Bai, Xia Chen, and Lifang Shao
Geosci. Model Dev., 15, 8111–8134, https://doi.org/10.5194/gmd-15-8111-2022, https://doi.org/10.5194/gmd-15-8111-2022, 2022
Short summary
Short summary
A large number of simulations are conducted to investigate how different physical parameterization schemes impact surface wind simulations under stable weather conditions over the coastal regions of North China using the Weather Research and Forecasting model with a horizontal grid spacing of 0.5 km. Results indicate that the simulated wind speed is most sensitive to the planetary boundary layer schemes, followed by short-wave/long-wave radiation schemes and microphysics schemes.
Xingying Huang, Andrew Gettelman, William C. Skamarock, Peter Hjort Lauritzen, Miles Curry, Adam Herrington, John T. Truesdale, and Michael Duda
Geosci. Model Dev., 15, 8135–8151, https://doi.org/10.5194/gmd-15-8135-2022, https://doi.org/10.5194/gmd-15-8135-2022, 2022
Short summary
Short summary
We focus on the recent development of a state-of-the-art storm-resolving global climate model and investigate how this next-generation model performs for precipitation prediction over the western USA. Results show realistic representations of precipitation with significantly enhanced snowpack over complex terrains. The model evaluation advances the unified modeling of large-scale forcing constraints and realistic fine-scale features to advance multi-scale climate predictions and changes.
Marina Martínez Montero, Michel Crucifix, Victor Couplet, Nuria Brede, and Nicola Botta
Geosci. Model Dev., 15, 8059–8084, https://doi.org/10.5194/gmd-15-8059-2022, https://doi.org/10.5194/gmd-15-8059-2022, 2022
Short summary
Short summary
We present SURFER, a lightweight model that links CO2 emissions and geoengineering to ocean acidification and sea level rise from glaciers, ocean thermal expansion and Greenland and Antarctic ice sheets. The ice sheet module adequately describes the tipping points of both Greenland and Antarctica. SURFER is understandable, fast, accurate up to several thousands of years, capable of emulating results obtained by state of the art models and well suited for policy analyses.
Haopeng Fan, Siran Li, Zhongmiao Sun, Guorui Xiao, Xinxing Li, and Xiaogang Liu
EGUsphere, https://doi.org/10.5194/egusphere-2022-898, https://doi.org/10.5194/egusphere-2022-898, 2022
Short summary
Short summary
The bias of traditional tropospheric zenith hydrostatic delay (ZHD) model is usually thought negligible, yet it still reaches 10 mm sometimes and would lead to mm-level position errors for space geodetic observations. Therefore, We analyzed the bias’ characteristics and present a grid model to correct the traditional ZHD formula. When we verified the efficiency based on data from ECMWF (European Centre for Medium-Range Weather Forecasts), it turned out that ZHD biases were rectified by ~50 %.
Francisco José Cuesta-Valero, Hugo Beltrami, Stephan Gruber, Almudena García-García, and J. Fidel González-Rouco
Geosci. Model Dev., 15, 7913–7932, https://doi.org/10.5194/gmd-15-7913-2022, https://doi.org/10.5194/gmd-15-7913-2022, 2022
Short summary
Short summary
Inversions of subsurface temperature profiles provide past long-term estimates of ground surface temperature histories and ground heat flux histories at timescales of decades to millennia. Theses estimates complement high-frequency proxy temperature reconstructions and are the basis for studying continental heat storage. We develop and release a new bootstrap method to derive meaningful confidence intervals for the average surface temperature and heat flux histories from any number of profiles.
Yilin Fang, L. Ruby Leung, Charles D. Koven, Gautam Bisht, Matteo Detto, Yanyan Cheng, Nate McDowell, Helene Muller-Landau, S. Joseph Wright, and Jeffrey Q. Chambers
Geosci. Model Dev., 15, 7879–7901, https://doi.org/10.5194/gmd-15-7879-2022, https://doi.org/10.5194/gmd-15-7879-2022, 2022
Short summary
Short summary
We develop a model that integrates an Earth system model with a three-dimensional hydrology model to explicitly resolve hillslope topography and water flow underneath the land surface to understand how local-scale hydrologic processes modulate vegetation along water availability gradients. Our coupled model can be used to improve the understanding of the diverse impact of local heterogeneity and water flux on nutrient availability and plant communities.
Wentao Zhang, Xiangjun Shi, and Chunsong Lu
Geosci. Model Dev., 15, 7751–7766, https://doi.org/10.5194/gmd-15-7751-2022, https://doi.org/10.5194/gmd-15-7751-2022, 2022
Short summary
Short summary
The two-moment bulk cloud microphysics scheme used in CAM6 was modified to consider the impacts of the ice-crystal size distribution shape parameter (μi). After that, how the μi impacts cloud microphysical processes and then climate simulations is clearly illustrated by offline tests and CAM6 model experiments. Our results and findings are useful for the further development of μi-related parameterizations.
Yona Silvy, Clément Rousset, Eric Guilyardi, Jean-Baptiste Sallée, Juliette Mignot, Christian Ethé, and Gurvan Madec
Geosci. Model Dev., 15, 7683–7713, https://doi.org/10.5194/gmd-15-7683-2022, https://doi.org/10.5194/gmd-15-7683-2022, 2022
Short summary
Short summary
A modeling framework is introduced to understand and decompose the mechanisms causing the ocean temperature, salinity and circulation to change since the pre-industrial period and into 21st century scenarios of global warming. This framework aims to look at the response to changes in the winds and in heat and freshwater exchanges at the ocean interface in global climate models, throughout the 1850–2100 period, to unravel their individual effects on the changing physical structure of the ocean.
Aiko Voigt, Petra Schwer, Noam von Rotberg, and Nicole Knopf
Geosci. Model Dev., 15, 7489–7504, https://doi.org/10.5194/gmd-15-7489-2022, https://doi.org/10.5194/gmd-15-7489-2022, 2022
Short summary
Short summary
In climate science, it is helpful to identify coherent objects, for example, those formed by clouds. However, many models now use unstructured grids, which makes it harder to identify coherent objects. We present a new method that solves this problem by moving model data from an unstructured triangular grid to a structured cubical grid. We implement the method in an open-source Python package and show that the method is ready to be applied to climate model data.
Jérémy Bernard, Erwan Bocher, Elisabeth Le Saux Wiederhold, François Leconte, and Valéry Masson
Geosci. Model Dev., 15, 7505–7532, https://doi.org/10.5194/gmd-15-7505-2022, https://doi.org/10.5194/gmd-15-7505-2022, 2022
Short summary
Short summary
OpenStreetMap is a collaborative project aimed at creaing a free dataset containing topographical information. Since these data are available worldwide, they can be used as standard data for geoscience studies. However, most buildings miss the height information that constitutes key data for numerous fields (urban climate, noise propagation, air pollution). In this work, the building height is estimated using statistical modeling using indicators that characterize the building's environment.
Sergey Kravtsov, Ilijana Mastilovic, Andrew McC. Hogg, William K. Dewar, and Jeffrey R. Blundell
Geosci. Model Dev., 15, 7449–7469, https://doi.org/10.5194/gmd-15-7449-2022, https://doi.org/10.5194/gmd-15-7449-2022, 2022
Short summary
Short summary
Climate is a complex system whose behavior is shaped by multitudes of processes operating on widely different spatial scales and timescales. In hierarchical modeling, one goes back and forth between highly idealized process models and state-of-the-art models coupling the entire range of climate subsystems to identify specific phenomena and understand their dynamics. The present contribution highlights an intermediate climate model focussing on midlatitude ocean–atmosphere interactions.
Ingo Wohltmann, Daniel Kreyling, and Ralph Lehmann
Geosci. Model Dev., 15, 7243–7255, https://doi.org/10.5194/gmd-15-7243-2022, https://doi.org/10.5194/gmd-15-7243-2022, 2022
Short summary
Short summary
The study evaluates the performance of the Data Assimilation Research Testbed (DART), equipped with the recently added forward operator Radiative Transfer for TOVS (RTTOV), in assimilating FY-4A visible images into the Weather Research and Forecasting (WRF) model. The ability of the WRF-DART/RTTOV system to improve the forecasting skills for a tropical storm over East Asia and the Western Pacific is demonstrated in an Observing System Simulation Experiment framework.
Juan Ruiz, Pierre Ailliot, Thi Tuyet Trang Chau, Pierre Le Bras, Valérie Monbet, Florian Sévellec, and Pierre Tandeo
Geosci. Model Dev., 15, 7203–7220, https://doi.org/10.5194/gmd-15-7203-2022, https://doi.org/10.5194/gmd-15-7203-2022, 2022
Short summary
Short summary
We present a new approach to validate numerical simulations of the current climate. The method can take advantage of existing climate simulations produced by different centers combining an analog forecasting approach with data assimilation to quantify how well a particular model reproduces a sequence of observed values. The method can be applied with different observations types and is implemented locally in space and time significantly reducing the associated computational cost.
Chahan M. Kropf, Alessio Ciullo, Laura Otth, Simona Meiler, Arun Rana, Emanuel Schmid, Jamie W. McCaughey, and David N. Bresch
Geosci. Model Dev., 15, 7177–7201, https://doi.org/10.5194/gmd-15-7177-2022, https://doi.org/10.5194/gmd-15-7177-2022, 2022
Short summary
Short summary
Mathematical models are approximations, and modellers need to understand and ideally quantify the arising uncertainties. Here, we describe and showcase the first, simple-to-use, uncertainty and sensitivity analysis module of the open-source and open-access climate-risk modelling platform CLIMADA. This may help to enhance transparency and intercomparison of studies among climate-risk modellers, help focus future research, and lead to better-informed decisions on climate adaptation.
Günther Zängl, Daniel Reinert, and Florian Prill
Geosci. Model Dev., 15, 7153–7176, https://doi.org/10.5194/gmd-15-7153-2022, https://doi.org/10.5194/gmd-15-7153-2022, 2022
Short summary
Short summary
This article describes the implementation of grid refinement in the ICOsahedral Nonhydrostatic (ICON) model, which has been jointly developed at several German institutions and constitutes a unified modeling system for global and regional numerical weather prediction and climate applications. The grid refinement allows using a higher resolution in regional domains and transferring the information back to the global domain by means of a feedback mechanism.
Suzanne Robinson, Ruza Ivanovic, Lauren Gregoire, Julia Tindall, Tina van de Flierdt, Yves Plancherel, Frerk Pöppelmeier, Kazuyo Tachikawa, and Paul Valdes
EGUsphere, https://doi.org/10.5194/egusphere-2022-606, https://doi.org/10.5194/egusphere-2022-606, 2022
Short summary
Short summary
We present the implementation of neodymium (Nd) isotopes into the ocean model of FAMOUS (ND v1.0). Nd fluxes from seafloor sediment alongside incorporation of Nd onto sinking particles represent the major global sources and sinks. However, model-data mismatch in the North Pacific and northern North Atlantic suggest that certain reactive components of the sediment interact the most with seawater. Our results are important for interpreting Nd isotopes in terms of ocean circulation.
Sébastien Gardoll and Olivier Boucher
Geosci. Model Dev., 15, 7051–7073, https://doi.org/10.5194/gmd-15-7051-2022, https://doi.org/10.5194/gmd-15-7051-2022, 2022
Short summary
Short summary
Tropical cyclones (TCs) are one of the most devastating natural disasters, which justifies monitoring and prediction in the context of a changing climate. In this study, we have adapted and tested a convolutional neural network (CNN) for the classification of reanalysis outputs (ERA5 and MERRA-2 labeled by HURDAT2) according to the presence or absence of TCs. We tested the impact of interpolation and of "mixing and matching" the training and test sets on the performance of the CNN.
Marco A. Giorgetta, William Sawyer, Xavier Lapillonne, Panagiotis Adamidis, Dmitry Alexeev, Valentin Clément, Remo Dietlicher, Jan Frederik Engels, Monika Esch, Henning Franke, Claudia Frauen, Walter M. Hannah, Benjamin R. Hillman, Luis Kornblueh, Philippe Marti, Matthew R. Norman, Robert Pincus, Sebastian Rast, Daniel Reinert, Reiner Schnur, Uwe Schulzweida, and Bjorn Stevens
Geosci. Model Dev., 15, 6985–7016, https://doi.org/10.5194/gmd-15-6985-2022, https://doi.org/10.5194/gmd-15-6985-2022, 2022
Short summary
Short summary
This work presents a first version of the ICON atmosphere model that works not only on CPUs, but also on GPUs. This GPU-enabled ICON version is benchmarked on two GPU machines and a CPU machine. While the weak scaling is very good on CPUs and GPUs, the strong scaling is poor on GPUs. But the high performance of GPU machines allowed for first simulations of a short period of the quasi-biennial oscillation at very high resolution with explicit convection and gravity wave forcing.
Shixuan Zhang, Kai Zhang, Hui Wan, and Jian Sun
Geosci. Model Dev., 15, 6787–6816, https://doi.org/10.5194/gmd-15-6787-2022, https://doi.org/10.5194/gmd-15-6787-2022, 2022
Short summary
Short summary
This study investigates the nudging implementation in the EAMv1 model. We find that (1) revising the sequence of calculations and using higher-frequency constraining data to improve the performance of a simulation nudged to EAMv1’s own meteorology, (2) using the relocated nudging tendency and 3-hourly ERA5 reanalysis to obtain a better agreement between nudged simulations and observations, and (3) using wind-only nudging are recommended for the estimates of global mean aerosol effects.
Christian R. Steger, Benjamin Steger, and Christoph Schär
Geosci. Model Dev., 15, 6817–6840, https://doi.org/10.5194/gmd-15-6817-2022, https://doi.org/10.5194/gmd-15-6817-2022, 2022
Short summary
Short summary
Terrain horizon and sky view factor are crucial quantities for many geoscientific applications; e.g. they are used to account for effects of terrain on surface radiation in climate and land surface models. Because typical terrain horizon algorithms are inefficient for high-resolution (< 30 m) elevation data, we developed a new algorithm based on a ray-tracing library. A comparison with two conventional methods revealed both its high performance and its accuracy for complex terrain.
Jane Patricia Mulcahy, Colin G. Jones, Steven T. Rumbold, Till Kuhlbrodt, Andrea J. Dittus, Edward W. Blockley, Andrew Yool, Jeremy Walton, Catherine Hardacre, Timothy Andrews, Alejandro Bodas-Salcedo, Marc Stringer, Lee de Mora, Phil Harris, Richard Hill, Doug Kelley, Eddy Robertson, and Yongming Tang
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2022-113, https://doi.org/10.5194/gmd-2022-113, 2022
Revised manuscript accepted for GMD
Short summary
Short summary
Recent global climate models simulate historical global mean surface temperatures which are colder than observed possibly to due to aerosol cooling. This raises questions about the model’s ability to simulate important climate processes and reduces confidence in their future climate predictions. We present a new version of the UK Earth System Model which has an improved simulation of aerosols and historical temperature record. Results from a range of climate change experiments are presented.
David Martín Belda, Peter Anthoni, David Wårlind, Stefan Olin, Guy Schurgers, Jing Tang, Benjamin Smith, and Almut Arneth
Geosci. Model Dev., 15, 6709–6745, https://doi.org/10.5194/gmd-15-6709-2022, https://doi.org/10.5194/gmd-15-6709-2022, 2022
Short summary
Short summary
We present a number of augmentations to the ecosystem model LPJ-GUESS, which will allow us to use it in studies of the interactions between the land biosphere and the climate. The new module enables calculation of fluxes of energy and water into the atmosphere that are consistent with the modelled vegetation processes. The modelled fluxes are in fair agreement with observations across 21 sites from the FLUXNET network.
Jorge Baño-Medina, Rodrigo Manzanas, Ezequiel Cimadevilla, Jesús Fernández, Jose González-Abad, Antonio S. Cofiño, and José Manuel Gutiérrez
Geosci. Model Dev., 15, 6747–6758, https://doi.org/10.5194/gmd-15-6747-2022, https://doi.org/10.5194/gmd-15-6747-2022, 2022
Short summary
Short summary
Deep neural networks are used to produce downscaled regional climate change projections over Europe for temperature and precipitation for the first time. The resulting dataset, DeepESD, is analyzed against state-of-the-art downscaling methodologies, reproducing more accurately the observed climate in the historical period and showing plausible future climate change signals with low computational requirements.
Stella Bourdin, Sébastien Fromang, William Dulac, Julien Cattiaux, and Fabrice Chauvin
Geosci. Model Dev., 15, 6759–6786, https://doi.org/10.5194/gmd-15-6759-2022, https://doi.org/10.5194/gmd-15-6759-2022, 2022
Short summary
Short summary
When studying tropical cyclones in a large dataset, one needs objective and automatic procedures to detect their specific pattern. Applying four different such algorithms to a reconstruction of the climate, we show that the choice of the algorithm is crucial to the climatology obtained. Mainly, the algorithms differ in their sensitivity to weak storms so that they provide different frequencies and durations. We review the different options to consider for the choice of the tracking methodology.
Stanley G. Benjamin, Tatiana G. Smirnova, Eric P. James, Eric J. Anderson, Ayumi Fujisaki-Manome, John G. W. Kelley, Greg E. Mann, Andrew D. Gronewold, Philip Chu, and Sean G. T. Kelley
Geosci. Model Dev., 15, 6659–6676, https://doi.org/10.5194/gmd-15-6659-2022, https://doi.org/10.5194/gmd-15-6659-2022, 2022
Short summary
Short summary
Application of 1-D lake models coupled within earth-system prediction models will improve accuracy but requires accurate initialization of lake temperatures. Here, we describe a lake initialization method by cycling within a weather prediction model to constrain lake temperature evolution. We compared these lake temperature values with other estimates and found much reduced errors (down to 1-2 K). The lake cycling initialization is now applied to two operational US NOAA weather models.
Nicholas K.-R. Kevlahan and Florian Lemarié
Geosci. Model Dev., 15, 6521–6539, https://doi.org/10.5194/gmd-15-6521-2022, https://doi.org/10.5194/gmd-15-6521-2022, 2022
Short summary
Short summary
WAVETRISK-2.1 is an innovative climate model for the world's oceans. It uses state-of-the-art techniques to change the model's resolution locally, from O(100 km) to O(5 km), as the ocean changes. This dynamic adaptivity makes optimal use of available supercomputer resources, and allows two-dimensional global scales and three-dimensional submesoscales to be captured in the same simulation. WAVETRISK-2.1 is designed to be coupled its companion global atmosphere model, WAVETRISK-1.x.
Cited articles
Ahlström, A., Smith, B., Lindström, J., Rummukainen, M., and Uvo, C. B.: GCM characteristics explain the majority of uncertainty in projected 21st century terrestrial ecosystem carbon balance, Biogeosciences, 10, 1517–1528, https://doi.org/10.5194/bg-10-1517-2013, 2013.
Ahrens, B., Braakhekke, M. C., Guggenberger, G., Schrumpf, M., and
Reichstein, M.: Contribution of sorption, DOC transport and microbial
interactions to the C-14 age of a soil organic carbon profile: Insights from
a calibrated process model, Soil. Biol. Biochem., 88, 390–402, 2015.
Berardi, D., Brzostek, E., Blanc-Betes, E., Davison, B., DeLucia, E. H.,
Hartman, M. D., Kent, J., Parton, W. J., Saha, D., and Hudiburg, T. W.:
21st-century biogeochemical modeling: Challenges for Century-based models
and where do we go from here?, GCB Bioenergy, 1–15, https://doi.org/10.1111/gcbb.12730, 2020.
Bergstra, J. and Bengio, Y.: Random Search for Hyper-Parameter Optimization,
J. Mach. Learn. Res., 13, 281–305, 2012.
Burrows, S. M., Maltrud, M., Yang, X., Zhu, Q., Jeffery, N., Shi, X.,
Ricciuto, D., Wang, S., Bisht, G., Tang, J., Wolfe, J., Harrop, B. E.,
Singh, B., Brent, L., Baldwin, S., Zhou, T., Cameron-Smith, P., Keen, N.,
Collier, N., Xu, M., Hunke, E. C., Elliott, S. M., Turner, A. K., Li, H.,
Wang, H., Golaz, J. C., Bond-Lamberty, B., Hoffman, F. M., Riley, W. J.,
Thornton, P. E., Calvin, K., and Leung, L. R.: The DOE E3SM v1.1
Biogeochemistry Configuration: Description and Simulated Ecosystem-Climate
Responses to Historical Changes in Forcing, J. Adv. Model. Earth. Sy., 12, e2019MS001766, https://doi.org/10.1029/2019MS001766, 2020.
Collier, N., Hoffman, F. M., Lawrence, D. M., Keppel-Aleks, G., Koven, C.
D., Riley, W. J., Mu, M. Q., and Randerson, J. T.: The International Land
Model Benchmarking (ILAMB) System: Design, Theory, and Implementation, J. Adv. Model. Earth. Sy., 10, 2731–2754, 2018.
Davies-Barnard, T., Meyerholt, J., Zaehle, S., Friedlingstein, P., Brovkin, V., Fan, Y., Fisher, R. A., Jones, C. D., Lee, H., Peano, D., Smith, B., Wårlind, D., and Wiltshire, A. J.: Nitrogen cycling in CMIP6 land surface models: progress and limitations, Biogeosciences, 17, 5129–5148, https://doi.org/10.5194/bg-17-5129-2020, 2020.
Dwivedi, D., Riley, W. J., Torn, M. S., Spycher, N., Maggi, F., and Tang, J.
Y.: Mineral properties, microbes, transport, and plant-input profiles
control vertical distribution and age of soil carbon stocks, Soil. Biol.
Biochem., 107, 244–259, 2017.
Fisher, R. A. and Koven, C. D.: Perspectives on the Future of Land Surface
Models and the Challenges of Representing Complex Terrestrial Systems, J. Adv. Model. Earth. Sy., 12, e2018MS001453, https://doi.org/10.1029/2018MS001453, 2020.
Golaz, J. C., Caldwell, P. M., Van Roekel, L. P., Petersen, M. R., Tang, Q.,
Wolfe, J. D., Abeshu, G., Anantharaj, V., Asay-Davis, X. S., Bader, D. C.,
Baldwin, S. A., Bisht, G., Bogenschutz, P. A., Branstetter, M., Brunke, M.
A., Brus, S. R., Burrows, S. M., Cameron-Smith, P. J., Donahue, A. S.,
Deakin, M., Easter, R. C., Evans, K. J., Feng, Y., Flanner, M., Foucar, J.
G., Fyke, J. G., Griffin, B. M., Hannay, C., Harrop, B. E., Hoffman, M. J.,
Hunke, E. C., Jacob, R. L., Jacobsen, D. W., Jeffery, N., Jones, P. W.,
Keen, N. D., Klein, S. A., Larson, V. E., Leung, L. R., Li, H. Y., Lin, W.
Y., Lipscomb, W. H., Ma, P. L., Mahajan, S., Maltrud, M. E., Mametjanov, A.,
McClean, J. L., McCoy, R. B., Neale, R. B., Price, S. F., Qian, Y., Rasch,
P. J., Eyre, J. E. J. R., Riley, W. J., Ringler, T. D., Roberts, A. F.,
Roesler, E. L., Salinger, A. G., Shaheen, Z., Shi, X. Y., Singh, B., Tang,
J. Y., Taylor, M. A., Thornton, P. E., Turner, A. K., Veneziani, M., Wan,
H., Wang, H. L., Wang, S. L., Williams, D. N., Wolfram, P. J., Worley, P.
H., Xie, S. C., Yang, Y., Yoon, J. H., Zelinka, M. D., Zender, C. S., Zeng,
X. B., Zhang, C. Z., Zhang, K., Zhang, Y., Zheng, X., Zhou, T., and Zhu, Q.:
The DOE E3SM Coupled Model Version 1: Overview and Evaluation at Standard
Resolution, J. Adv. Model. Earth. Sy., 11, 2089–2129, 2019.
Grant, R. F.: Modelling changes in nitrogen cycling to sustain increases in forest productivity under elevated atmospheric CO2 and contrasting site conditions, Biogeosciences, 10, 7703–7721, https://doi.org/10.5194/bg-10-7703-2013, 2013.
Gross, M., Wan, H., Rasch, P. J., Caldwell, P. M., Williamson, D. L.,
Klocke, D., Jablonowski, C., Thatcher, D. R., Wood, N., Cullen, M., Beare,
B., Willett, M., Lemarie, F., Blayo, E., Malardel, S., Termonia, P.,
Gassmann, A., Lauritzen, P. H., Johansen, H., Zarzycki, C. M., Sakaguchi,
K., and Leung, R.: Physics-Dynamics Coupling in Weather, Climate, and Earth
System Models: Challenges and Recent Progress, Mon. Weather Rev., 146,
3505–3544, 2018.
Hirano, T., Kim, H., and Tanaka, Y.: Long-term half-hourly measurement of
soil CO2 concentration and soil respiration in a temperate deciduous forest, J. Geophys. Res.-Atmos., 108, 4631, https://doi.org/10.1029/2003JD003766, 2003.
Hoffman, F. M., Randerson, J. T., Arora, V. K., Bao, Q., Cadule, P., Ji, D.,
Jones, C. D., Kawamiya, M., Khatiwala, S., Lindsay, K., Obata, A.,
Shevliakova, E., Six, K. D., Tjiputra, J. F., Volodin, E. M., and Wu, T.:
Causes and implications of persistent atmospheric carbon dioxide biases in
Earth System Models, J. Geophys. Res.-Biogeo., 119, 141–162, 2014.
Huntzinger, D. N., Michalak, A. M., Schwalm, C., Ciais, P., King, A. W.,
Fang, Y., Schaefer, K., Wei, Y., Cook, R. B., Fisher, J. B., Hayes, D.,
Huang, M., Ito, A., Jain, A. K., Lei, H., Lu, C., Maignan, F., Mao, J.,
Parazoo, N., Peng, S., Poulter, B., Ricciuto, D., Shi, X., Tian, H., Wang,
W., Zeng, N., and Zhao, F.: Uncertainty in the response of terrestrial
carbon sink to environmental drivers undermines carbon-climate feedback
predictions, Sci. Rep.-UK, 7, 4765, https://doi.org/10.1038/s41598-017-03818-2, 2017.
Hurrell, J. W., Holland, M. M., Gent, P. R., Ghan, S., Kay, J. E., Kushner,
P. J., Lamarque, J. F., Large, W. G., Lawrence, D., Lindsay, K., Lipscomb,
W. H., Long, M. C., Mahowald, N., Marsh, D. R., Neale, R. B., Rasch, P.,
Vavrus, S., Vertenstein, M., Bader, D., Collins, W. D., Hack, J. J., Kiehl,
J., and Marshall, S.: The Community Earth System Model A Framework for
Collaborative Research, B. Am. Meteorol. Soc., 94, 1339–1360, 2013.
Jarvis, N. J., Taylor, A., Larsbo, M., Etana, A., and Rosen, K.: Modelling
the effects of bioturbation on the re-distribution of 137Cs in an
undisturbed grassland soil, Eur. J. Soil. Sci., 61, 24–34, 2010.
Jung, M., Reichstein, M., Schwalm, C. R., Huntingford, C., Sitch, S.,
Ahlstrom, A., Arneth, A., Camps-Valls, G., Ciais, P., Friedlingstein, P.,
Gans, F., Ichii, K., Ain, A. K. J., Kato, E., Papale, D., Poulter, B.,
Raduly, B., Rodenbeck, C., Tramontana, G., Viovy, N., Wang, Y. P., Weber,
U., Zaehle, S., and Zeng, N.: Compensatory water effects link yearly global
land CO2 sink changes to temperature, Nature, 541, 516–520, 2017.
Koven, C., Friedlingstein, P., Ciais, P., Khvorostyanov, D., Krinner, G.,
and Tarnocai, C.: On the formation of high-latitude soil carbon stocks:
Effects of cryoturbation and insulation by organic matter in a land surface
model, Geophys. Res. Lett., 36, L21501, https://doi.org/10.1029/2009GL040150, 2009.
Koven, C. D., Riley, W. J., Subin, Z. M., Tang, J. Y., Torn, M. S., Collins, W. D., Bonan, G. B., Lawrence, D. M., and Swenson, S. C.: The effect of vertically resolved soil biogeochemistry and alternate soil C and N models on C dynamics of CLM4, Biogeosciences, 10, 7109–7131, https://doi.org/10.5194/bg-10-7109-2013, 2013.
Kumar, A., Jaiswal, D. K., and Kumar, N.: Analytical solutions of
one-dimensional advection-diffusion equation with variable coefficients in a
finite domain, J. Earth. Syst. Sci., 118, 539–549, 2009.
Le Quéré, C., Andrew, R. M., Canadell, J. G., Sitch, S., Korsbakken, J. I., Peters, G. P., Manning, A. C., Boden, T. A., Tans, P. P., Houghton, R. A., Keeling, R. F., Alin, S., Andrews, O. D., Anthoni, P., Barbero, L., Bopp, L., Chevallier, F., Chini, L. P., Ciais, P., Currie, K., Delire, C., Doney, S. C., Friedlingstein, P., Gkritzalis, T., Harris, I., Hauck, J., Haverd, V., Hoppema, M., Klein Goldewijk, K., Jain, A. K., Kato, E., Körtzinger, A., Landschützer, P., Lefèvre, N., Lenton, A., Lienert, S., Lombardozzi, D., Melton, J. R., Metzl, N., Millero, F., Monteiro, P. M. S., Munro, D. R., Nabel, J. E. M. S., Nakaoka, S., O'Brien, K., Olsen, A., Omar, A. M., Ono, T., Pierrot, D., Poulter, B., Rödenbeck, C., Salisbury, J., Schuster, U., Schwinger, J., Séférian, R., Skjelvan, I., Stocker, B. D., Sutton, A. J., Takahashi, T., Tian, H., Tilbrook, B., van der Laan-Luijkx, I. T., van der Werf, G. R., Viovy, N., Walker, A. P., Wiltshire, A. J., and Zaehle, S.: Global Carbon Budget 2016, Earth Syst. Sci. Data, 8, 605–649, https://doi.org/10.5194/essd-8-605-2016, 2016.
Luo, Y. Q., Randerson, J. T., Abramowitz, G., Bacour, C., Blyth, E., Carvalhais, N., Ciais, P., Dalmonech, D., Fisher, J. B., Fisher, R., Friedlingstein, P., Hibbard, K., Hoffman, F., Huntzinger, D., Jones, C. D., Koven, C., Lawrence, D., Li, D. J., Mahecha, M., Niu, S. L., Norby, R., Piao, S. L., Qi, X., Peylin, P., Prentice, I. C., Riley, W., Reichstein, M., Schwalm, C., Wang, Y. P., Xia, J. Y., Zaehle, S., and Zhou, X. H.: A framework for benchmarking land models, Biogeosciences, 9, 3857–3874, https://doi.org/10.5194/bg-9-3857-2012, 2012.
Manson, J. R. and Wallis, S. G.: A conservative, semi-Lagrangian fate and
transport model for fluvial systems – I. Theoretical development, Water Res., 34, 3769–3777, 2000.
Medvigy, D., Wang, G. S., Zhu, Q., Riley, W. J., Trierweiler, A. M., Waring,
B. G., Xu, X. T., and Powers, J. S.: Observed variation in soil properties
can drive large variation in modelled forest functioning and composition
during tropical forest secondary succession, New Phytol., 223, 1820–1833,
2019.
Munhoven, G.: Model of Early Diagenesis in the Upper Sediment with Adaptable complexity – MEDUSA (v. 2): a time-dependent biogeochemical sediment module for Earth system models, process analysis and teaching, Geosci. Model Dev., 14, 3603–3631, https://doi.org/10.5194/gmd-14-3603-2021, 2021.
Oleson, K. W., Lawrence, D. M., Bonan, G. B., Drewniak, B., Huang, M.,
Koven, C. D., Levis, S., Li, F., Riley, W. J., Subin, Z. M., Swenson, S. C.,
Thornton, P. E., Bozbiyik, A., Fisher, R., Heald, C. L., Kluzek, E.,
Lamarque, J. F., Lawrence, P. J., Leung, L. R., Lipscomb, W. H., Muszala,
S., Ricciuto, D. M., Sacks, W., Sun, Y., Tang, J. Y., and Yang, Z.:
Technical Description of version 4.5 of the Community Land Model (CLM),
National Center for Atmospheric Research, Boulder, Colorado, NCAR/TN-503+STR, https://doi.org/10.5065/D6RR1W7M, 2013.
Petrovskii, S. and Petrovskaya, N.: Computational ecology as an emerging
science, Interface Focus, 2, 241–254, 2012.
Riley, W. J., Zhu, Q., and Tang, J. Y.: Weaker land-climate feedbacks from
nutrient uptake during photosynthesis-inactive periods, Nat. Clim. Change., 8, 1002–1006, 2018.
Riley, W. J., Sierra, C., Tang, J. Y., Bouskill, N. J., Zhu, Q., and
Abramoff, R.: Next generation soil biogeochemistry model representations: A
proposed community open source model farm (BeTR-S), in: Multi-scale
Biogeochemical Processes in Soil Ecosystems: Critical Reactions and
Resilience to Climate Changes, edited by: Yang, Y., Keiluweit, M., Senesi, N., and Xing, B., John Wiley & Sons, Inc, 233–257,
ISBN 9781119480433, 2022.
rubisco-sfa: ILAMB, GitHub [code], https://github.com/rubisco-sfa/ILAMB (last access: 23 February 2022), 2021.
Simpson, M. J. and Landman, K. A.: Analysis of split operator methods
applied to reactive transport with Monod kinetics, Adv. Water Resour., 30,
2026–2033, 2007.
Tang, J. Y.: BeTR-biogeochemistry-modeling/sbetr: New release after bgc update with elm, Zenodo [data set], https://doi.org/10.5281/zenodo.5526854, 2021.
Tang, J. Y.: v1.0.0 jinyuntang/E3SM: ELMv1-BeTR-ECA for BeTR-v2 paper, Zenodo [data set], https://doi.org/10.5281/zenodo.6233165, 2022.
Tang, J. Y. and Riley, W. J.: A total quasi-steady-state formulation of substrate uptake kinetics in complex networks and an example application to microbial litter decomposition, Biogeosciences, 10, 8329–8351, https://doi.org/10.5194/bg-10-8329-2013, 2013.
Tang, J. Y. and Riley, W. J.: Technical Note: Simple formulations and solutions of the dual-phase diffusive transport for biogeochemical modeling, Biogeosciences, 11, 3721–3728, https://doi.org/10.5194/bg-11-3721-2014, 2014.
Tang, J. Y. and Riley, W. J.: Technical Note: A generic law-of-the-minimum flux limiter for simulating substrate limitation in biogeochemical models, Biogeosciences, 13, 723–735, https://doi.org/10.5194/bg-13-723-2016, 2016.
Tang, J. Y. and Riley, W. J.: Predicted Land Carbon Dynamics Are Strongly
Dependent on the Numerical Coupling of Nitrogen Mobilizing and Immobilizing
Processes: A Demonstration with the E3SM Land Model, Earth Interact., 22, 11, https://doi.org/10.1175/EI-D-17-0023.1, 2018.
Tang, J. Y. and Riley, W. J.: Linear two-pool models are insufficient to
infer soil organic matter decomposition temperature sensitivity from
incubations, Biogeochemistry, 149, 251–261, 2020.
Tang, J. Y. and Riley, W. J.: On the modeling paradigm of plant root
nutrient acquisition, Plant Soil, 459, 441–451, 2021.
Tang, J., Zhuang, Q., Shannon, R. D., and White, J. R.: Quantifying wetland methane emissions with process-based models of different complexities, Biogeosciences, 7, 3817–3837, https://doi.org/10.5194/bg-7-3817-2010, 2010.
Tang, J. Y., Riley, W. J., Koven, C. D., and Subin, Z. M.: CLM4-BeTR, a generic biogeochemical transport and reaction module for CLM4: model development, evaluation, and application, Geosci. Model Dev., 6, 127–140, https://doi.org/10.5194/gmd-6-127-2013, 2013.
Tang, J. Y., Riley, W. J., and Niu, J.: Incorporating root hydraulic
redistribution in CLM4.5: Effects on predicted site and global
evapotranspiration, soil moisture, and water storage, J. Adv. Model. Earth. Sy., 7, 1828–1848, 2015.
Todd-Brown, K. E. O., Randerson, J. T., Hopkins, F., Arora, V., Hajima, T., Jones, C., Shevliakova, E., Tjiputra, J., Volodin, E., Wu, T., Zhang, Q., and Allison, S. D.: Changes in soil organic carbon storage predicted by Earth system models during the 21st century, Biogeosciences, 11, 2341–2356, https://doi.org/10.5194/bg-11-2341-2014, 2014.
Tramontana, G., Jung, M., Schwalm, C. R., Ichii, K., Camps-Valls, G., Ráduly, B., Reichstein, M., Arain, M. A., Cescatti, A., Kiely, G., Merbold, L., Serrano-Ortiz, P., Sickert, S., Wolf, S., and Papale, D.: Predicting carbon dioxide and energy fluxes across global FLUXNET sites with regression algorithms, Biogeosciences, 13, 4291–4313, https://doi.org/10.5194/bg-13-4291-2016, 2016.
Wieder, W. R., Allison, S. D., Davidson, E. A., Georgiou, K., Hararuk, O.,
He, Y. J., Hopkins, F., Luo, Y. Q., Smith, M. J., Sulman, B., Todd-Brown,
K., Wang, Y. P., Xia, J. Y., and Xu, X. F.: Explicitly representing soil
microbial processes in Earth system models, Global Biogeochem. Cy., 29,
1782–1800, 2015.
Zaehle, S., Medlyn, B. E., De Kauwe, M. G., Walker, A. P., Dietze, M. C.,
Hickler, T., Luo, Y. Q., Wang, Y. P., El-Masri, B., Thornton, P., Jain, A.,
Wang, S. S., Warlind, D., Weng, E. S., Parton, W., Iversen, C. M.,
Gallet-Budynek, A., McCarthy, H., Finzi, A. C., Hanson, P. J., Prentice, I.
C., Oren, R., and Norby, R. J.: Evaluation of 11 terrestrial carbon-nitrogen
cycle models against observations from two temperate Free-Air CO2 Enrichment studies, New Phytol., 202, 803–822, 2014.
Zhu, Q., Riley, W. J., Tang, J., and Koven, C. D.: Multiple soil nutrient competition between plants, microbes, and mineral surfaces: model development, parameterization, and example applications in several tropical forests, Biogeosciences, 13, 341–363, https://doi.org/10.5194/bg-13-341-2016, 2016.
Zhu, Q., Riley, W. J., and Tang, J. Y.: A new theory of plant-microbe
nutrient competition resolves inconsistencies between observations and model
predictions, Ecol. Appl., 27, 875–886, 2017.
Zhu, Q., Riley, W. J., Tang, J. Y., Collier, N., Hoffman, F. M., Yang, X.
J., and Bisht, G.: Representing nitrogen, phosphorus, and carbon
interactions in the E3SM land model: development and dlobal benchmarking, J. Adv. Model. Earth. Sy., 11, 2238–2258, 2019.
Short summary
We here describe version 2 of BeTR, a reactive transport model created to help ease the development of biogeochemical capability in Earth system models that are used for quantifying ecosystem–climate feedbacks. We then coupled BeTR-v2 to the Energy Exascale Earth System Model to quantify how different numerical couplings of plants and soils affect simulated ecosystem biogeochemistry. We found that different couplings lead to significant uncertainty that is not correctable by tuning parameters.
We here describe version 2 of BeTR, a reactive transport model created to help ease the...
