Articles | Volume 7, issue 4
https://doi.org/10.5194/gmd-7-1271-2014
© Author(s) 2014. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/gmd-7-1271-2014
© Author(s) 2014. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Model description paper
| 
04 Jul 2014
Model description paper |
| 04 Jul 2014
C-GEM (v 1.0): a new, cost-efficient biogeochemical model for estuaries and its application to a funnel-shaped system
C. Volta
Department of Earth and Environmental Sciences, Université Libre de Bruxelles, Brussels, Belgium
School of Geographical Sciences, University of Bristol, Bristol, UK
H. H. G. Savenije
Water Resources Section, Department of Water Management, Delft University of Technology, Delft, the Netherlands
G. G. Laruelle
Department of Earth and Environmental Sciences, Université Libre de Bruxelles, Brussels, Belgium
P. Regnier
Department of Earth and Environmental Sciences, Université Libre de Bruxelles, Brussels, Belgium
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Revised manuscript accepted for HESS
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Hongkai Gao, Chuntan Han, Rensheng Chen, Zijing Feng, Kang Wang, Fabrizio Fenicia, and Hubert Savenije
Hydrol. Earth Syst. Sci., 26, 4187–4208, https://doi.org/10.5194/hess-26-4187-2022, https://doi.org/10.5194/hess-26-4187-2022, 2022
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Haicheng Zhang, Ronny Lauerwald, Pierre Regnier, Philippe Ciais, Kristof Van Oost, Victoria Naipal, Bertrand Guenet, and Wenping Yuan
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We present a land surface model which can simulate the complete lateral transfer of sediment and carbon from land to ocean through rivers. Our model captures the water, sediment, and organic carbon discharges in European rivers well. Application of our model in Europe indicates that lateral carbon transfer can strongly change regional land carbon budgets by affecting organic carbon distribution and soil moisture.
Henry Zimba, Miriam Coenders-Gerrits, Kawawa Banda, Petra Hulsman, Nick van de Giesen, Imasiku Nyambe, and Hubert Savenije
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2022-114, https://doi.org/10.5194/hess-2022-114, 2022
Manuscript not accepted for further review
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We compare performance of evaporation models in the Luangwa Basin located in a semi-arid and complex Miombo ecosystem in Africa. Miombo plants changes colour, drop off leaves and acquire new leaves during the dry season. In addition, the plant roots go deep in the soil and appear to access groundwater. Results show that evaporation models with structure and process that do not capture this unique plant structure and behaviour appears to have difficulties to correctly estimating evaporation.
Laurène J. E. Bouaziz, Emma E. Aalbers, Albrecht H. Weerts, Mark Hegnauer, Hendrik Buiteveld, Rita Lammersen, Jasper Stam, Eric Sprokkereef, Hubert H. G. Savenije, and Markus Hrachowitz
Hydrol. Earth Syst. Sci., 26, 1295–1318, https://doi.org/10.5194/hess-26-1295-2022, https://doi.org/10.5194/hess-26-1295-2022, 2022
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Céline Gommet, Ronny Lauerwald, Philippe Ciais, Bertrand Guenet, Haicheng Zhang, and Pierre Regnier
Earth Syst. Dynam., 13, 393–418, https://doi.org/10.5194/esd-13-393-2022, https://doi.org/10.5194/esd-13-393-2022, 2022
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Dissolved organic carbon (DOC) leaching from soils into river networks is an important component of the land carbon (C) budget, but its spatiotemporal variation is not yet fully constrained. We use a land surface model to simulate the present-day land C budget at the European scale, including leaching of DOC from the soil. We found average leaching of 14.3 Tg C yr−1 (0.6 % of terrestrial net primary production) with seasonal variations. We determine runoff and temperature to be the main drivers.
Xi Wei, Josette Garnier, Vincent Thieu, Paul Passy, Romain Le Gendre, Gilles Billen, Maia Akopian, and Goulven Gildas Laruelle
Biogeosciences, 19, 931–955, https://doi.org/10.5194/bg-19-931-2022, https://doi.org/10.5194/bg-19-931-2022, 2022
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Hubert T. Samboko, Sten Schurer, Hubert H. G. Savenije, Hodson Makurira, Kawawa Banda, and Hessel Winsemius
Geosci. Instrum. Method. Data Syst., 11, 1–23, https://doi.org/10.5194/gi-11-1-2022, https://doi.org/10.5194/gi-11-1-2022, 2022
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Alizée Roobaert, Laure Resplandy, Goulven G. Laruelle, Enhui Liao, and Pierre Regnier
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Amanda R. Fay, Luke Gregor, Peter Landschützer, Galen A. McKinley, Nicolas Gruber, Marion Gehlen, Yosuke Iida, Goulven G. Laruelle, Christian Rödenbeck, Alizée Roobaert, and Jiye Zeng
Earth Syst. Sci. Data, 13, 4693–4710, https://doi.org/10.5194/essd-13-4693-2021, https://doi.org/10.5194/essd-13-4693-2021, 2021
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The movement of carbon dioxide from the atmosphere to the ocean is estimated using surface ocean carbon (pCO2) measurements and an equation including variables such as temperature and wind speed; the choices of these variables lead to uncertainties. We introduce the SeaFlux ensemble which provides carbon flux maps calculated in a consistent manner, thus reducing uncertainty by using common choices for wind speed and a set definition of "global" coverage.
Hongkai Gao, Chuntan Han, Rensheng Chen, Zijing Feng, Kang Wang, Fabrizio Fenicia, and Hubert Savenije
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2021-264, https://doi.org/10.5194/hess-2021-264, 2021
Manuscript not accepted for further review
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Permafrost hydrology is one of the 23 major unsolved problems in hydrology. In this study, we used a stepwise modeling and dynamic parameter method to examine the impact of permafrost on streamflow in the Hulu catchment in western China. We found that: topography and landscape are dominant controls on catchment response; baseflow recession is slower than other regions; precipitation-runoff relationship is non-stationary; permafrost impacts on streamflow mostly at the beginning of melting season.
Laurène J. E. Bouaziz, Fabrizio Fenicia, Guillaume Thirel, Tanja de Boer-Euser, Joost Buitink, Claudia C. Brauer, Jan De Niel, Benjamin J. Dewals, Gilles Drogue, Benjamin Grelier, Lieke A. Melsen, Sotirios Moustakas, Jiri Nossent, Fernando Pereira, Eric Sprokkereef, Jasper Stam, Albrecht H. Weerts, Patrick Willems, Hubert H. G. Savenije, and Markus Hrachowitz
Hydrol. Earth Syst. Sci., 25, 1069–1095, https://doi.org/10.5194/hess-25-1069-2021, https://doi.org/10.5194/hess-25-1069-2021, 2021
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We quantify the differences in internal states and fluxes of 12 process-based models with similar streamflow performance and assess their plausibility using remotely sensed estimates of evaporation, snow cover, soil moisture and total storage anomalies. The dissimilarities in internal process representation imply that these models cannot all simultaneously be close to reality. Therefore, we invite modelers to evaluate their models using multiple variables and to rely on multi-model studies.
Petra Hulsman, Hubert H. G. Savenije, and Markus Hrachowitz
Hydrol. Earth Syst. Sci., 25, 957–982, https://doi.org/10.5194/hess-25-957-2021, https://doi.org/10.5194/hess-25-957-2021, 2021
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Satellite observations have increasingly been used for model calibration, while model structural developments largely rely on discharge data. For large river basins, this often results in poor representations of system internal processes. This study explores the combined use of satellite-based evaporation and total water storage data for model structural improvement and spatial–temporal model calibration for a large, semi-arid and data-scarce river system.
César Dionisio Jiménez-Rodríguez, Miriam Coenders-Gerrits, Bart Schilperoort, Adriana del Pilar González-Angarita, and Hubert Savenije
Hydrol. Earth Syst. Sci., 25, 619–635, https://doi.org/10.5194/hess-25-619-2021, https://doi.org/10.5194/hess-25-619-2021, 2021
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During rainfall events, evaporation from tropical forests is usually ignored. However, the water retained in the canopy during rainfall increases the evaporation despite the high-humidity conditions. In a tropical wet forest in Costa Rica, it was possible to depict vapor plumes rising from the forest canopy during rainfall. These plumes are evidence of forest evaporation. Also, we identified the conditions that allowed this phenomenon to happen using time-lapse videos and meteorological data.
Bart Schilperoort, Miriam Coenders-Gerrits, César Jiménez Rodríguez, Christiaan van der Tol, Bas van de Wiel, and Hubert Savenije
Biogeosciences, 17, 6423–6439, https://doi.org/10.5194/bg-17-6423-2020, https://doi.org/10.5194/bg-17-6423-2020, 2020
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With distributed temperature sensing (DTS) we measured a vertical temperature profile in a forest, from the forest floor to above the treetops. Using this temperature profile we can see which parts of the forest canopy are colder (thus more dense) or warmer (and less dense) and study the effect this has on the suppression of turbulent mixing. This can be used to improve our knowledge of the interaction between the atmosphere and forests and improve carbon dioxide flux measurements over forests.
Peter Landschützer, Goulven G. Laruelle, Alizee Roobaert, and Pierre Regnier
Earth Syst. Sci. Data, 12, 2537–2553, https://doi.org/10.5194/essd-12-2537-2020, https://doi.org/10.5194/essd-12-2537-2020, 2020
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In recent years, multiple estimates of the global air–sea CO2 flux emerged from upscaling shipboard pCO2 measurements. They are however limited to the open-ocean domain and do not consider the coastal ocean, i.e. a significant marine sink for CO2. We build towards an integrated pCO2 product that combines both the open-ocean and coastal-ocean domain and focus on the evaluation of the common overlap area of these products and how well the aquatic continuum is represented in the new climatology.
Justus G. V. van Ramshorst, Miriam Coenders-Gerrits, Bart Schilperoort, Bas J. H. van de Wiel, Jonathan G. Izett, John S. Selker, Chad W. Higgins, Hubert H. G. Savenije, and Nick C. van de Giesen
Atmos. Meas. Tech., 13, 5423–5439, https://doi.org/10.5194/amt-13-5423-2020, https://doi.org/10.5194/amt-13-5423-2020, 2020
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In this work we present experimental results of a novel actively heated fiber-optic (AHFO) observational wind-probing technique. We utilized a controlled wind-tunnel setup to assess both the accuracy and precision of AHFO under a range of operational conditions (wind speed, angles of attack and temperature differences). AHFO has the potential to provide high-resolution distributed observations of wind speeds, allowing for better spatial characterization of fine-scale processes.
Marielle Saunois, Ann R. Stavert, Ben Poulter, Philippe Bousquet, Josep G. Canadell, Robert B. Jackson, Peter A. Raymond, Edward J. Dlugokencky, Sander Houweling, Prabir K. Patra, Philippe Ciais, Vivek K. Arora, David Bastviken, Peter Bergamaschi, Donald R. Blake, Gordon Brailsford, Lori Bruhwiler, Kimberly M. Carlson, Mark Carrol, Simona Castaldi, Naveen Chandra, Cyril Crevoisier, Patrick M. Crill, Kristofer Covey, Charles L. Curry, Giuseppe Etiope, Christian Frankenberg, Nicola Gedney, Michaela I. Hegglin, Lena Höglund-Isaksson, Gustaf Hugelius, Misa Ishizawa, Akihiko Ito, Greet Janssens-Maenhout, Katherine M. Jensen, Fortunat Joos, Thomas Kleinen, Paul B. Krummel, Ray L. Langenfelds, Goulven G. Laruelle, Licheng Liu, Toshinobu Machida, Shamil Maksyutov, Kyle C. McDonald, Joe McNorton, Paul A. Miller, Joe R. Melton, Isamu Morino, Jurek Müller, Fabiola Murguia-Flores, Vaishali Naik, Yosuke Niwa, Sergio Noce, Simon O'Doherty, Robert J. Parker, Changhui Peng, Shushi Peng, Glen P. Peters, Catherine Prigent, Ronald Prinn, Michel Ramonet, Pierre Regnier, William J. Riley, Judith A. Rosentreter, Arjo Segers, Isobel J. Simpson, Hao Shi, Steven J. Smith, L. Paul Steele, Brett F. Thornton, Hanqin Tian, Yasunori Tohjima, Francesco N. Tubiello, Aki Tsuruta, Nicolas Viovy, Apostolos Voulgarakis, Thomas S. Weber, Michiel van Weele, Guido R. van der Werf, Ray F. Weiss, Doug Worthy, Debra Wunch, Yi Yin, Yukio Yoshida, Wenxin Zhang, Zhen Zhang, Yuanhong Zhao, Bo Zheng, Qing Zhu, Qiuan Zhu, and Qianlai Zhuang
Earth Syst. Sci. Data, 12, 1561–1623, https://doi.org/10.5194/essd-12-1561-2020, https://doi.org/10.5194/essd-12-1561-2020, 2020
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Understanding and quantifying the global methane (CH4) budget is important for assessing realistic pathways to mitigate climate change. We have established a consortium of multidisciplinary scientists under the umbrella of the Global Carbon Project to synthesize and stimulate new research aimed at improving and regularly updating the global methane budget. This is the second version of the review dedicated to the decadal methane budget, integrating results of top-down and bottom-up estimates.
Petra Hulsman, Hessel C. Winsemius, Claire I. Michailovsky, Hubert H. G. Savenije, and Markus Hrachowitz
Hydrol. Earth Syst. Sci., 24, 3331–3359, https://doi.org/10.5194/hess-24-3331-2020, https://doi.org/10.5194/hess-24-3331-2020, 2020
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In the absence of discharge data in ungauged basins, remotely sensed river water level data, i.e. altimetry, may provide valuable information to calibrate hydrological models. This study illustrated that for large rivers in data-scarce regions, river altimetry data from multiple locations combined with GRACE data have the potential to fill this gap when combined with estimates of the river geometry, thereby allowing a step towards more reliable hydrological modelling in data-scarce regions.
Matteo Puglini, Victor Brovkin, Pierre Regnier, and Sandra Arndt
Biogeosciences, 17, 3247–3275, https://doi.org/10.5194/bg-17-3247-2020, https://doi.org/10.5194/bg-17-3247-2020, 2020
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A reaction-transport model to assess the potential non-turbulent methane flux from the East Siberian Arctic sediments to water columns is applied here. We show that anaerobic oxidation of methane (AOM) is an efficient filter except for high values of sedimentation rate and advective flow, which enable considerable non-turbulent steady-state methane fluxes. Significant transient methane fluxes can also occur during the building-up phase of the AOM-performing biomass microbial community.
César Dionisio Jiménez-Rodríguez, Miriam Coenders-Gerrits, Jochen Wenninger, Adriana Gonzalez-Angarita, and Hubert Savenije
Hydrol. Earth Syst. Sci., 24, 2179–2206, https://doi.org/10.5194/hess-24-2179-2020, https://doi.org/10.5194/hess-24-2179-2020, 2020
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Tropical forest ecosystems are able to export a lot of water to the atmosphere by means of evaporation. However, little is known on how their complex structure affects this water flux. This paper analyzes the contribution of three canopy layers in terms of water fluxes and stable water isotope signatures. During the dry season in 2018 the two lower canopy layers provide 20 % of measured evaporation, highlighting the importance of knowing how forest structure can affect the hydrological cycle.
Nutchanart Sriwongsitanon, Wasana Jandang, Thienchart Suwawong, and Hubert H.~G. Savenije
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2020-82, https://doi.org/10.5194/hess-2020-82, 2020
Manuscript not accepted for further review
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In this paper we present a method to distribute crucial model parameters over subcatchments so as to enhance overall rainfall-runoff performance. We also analyse how soil moisture indicators can be used to distribute root zone moisture capacity over subcatchments. NDII proves to be very effective for this purpose, resulting in better overall model performance, good temporal correspondence between modelled soil moisture and the SWI, and improved recession behavior and dry season flow.
Zhilin Zhang and Hubert Savenije
Earth Syst. Dynam., 10, 667–684, https://doi.org/10.5194/esd-10-667-2019, https://doi.org/10.5194/esd-10-667-2019, 2019
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Natural systems evolve towards a state of maximum power, including estuarine circulation. The energy of lighter fresh water drives circulation, while it dissipates by friction. This rotational flow causes the spread of salinity, which is represented by the dispersion coefficient. In this paper, the maximum power concept provides a new equation for this coefficient. Together with the steady-state equation, this results in a new analytical model for density-driven salinity intrusion.
César Dionisio Jiménez-Rodríguez, Miriam Coenders-Gerrits, Thom Bogaard, Erika Vatiero, and Hubert Savenije
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2019-344, https://doi.org/10.5194/hess-2019-344, 2019
Revised manuscript not accepted
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Knowing the isotopic composition of water vapor in the air is a difficult task. The estimation of δ18O and δ2H has to be done carefully, because it is accompanied by a high risk of methodological errors (if it is sampled) or wrong assumptions that can lead to incorrect values (if it is modeled). The aim of this work was to compare available sampling methods for water vapor in the air and estimate their isotopic composition, comparing the results against direct measurements of the sampled air.
Huayang Cai, Hubert H. G. Savenije, Erwan Garel, Xianyi Zhang, Leicheng Guo, Min Zhang, Feng Liu, and Qingshu Yang
Hydrol. Earth Syst. Sci., 23, 2779–2794, https://doi.org/10.5194/hess-23-2779-2019, https://doi.org/10.5194/hess-23-2779-2019, 2019
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Tide–river dynamics play an essential role in large-scale river deltas as they exert a tremendous impact on delta morphodynamics, salt intrusion and deltaic ecosystems. For the first time, we illustrate that there is a critical river discharge, beyond which tidal damping is reduced with increasing river discharge, and we explore the underlying mechanism using an analytical model. The results are useful for guiding sustainable water management and sediment transport in tidal rivers.
Erwin Zehe, Ralf Loritz, Conrad Jackisch, Martijn Westhoff, Axel Kleidon, Theresa Blume, Sibylle K. Hassler, and Hubert H. Savenije
Hydrol. Earth Syst. Sci., 23, 971–987, https://doi.org/10.5194/hess-23-971-2019, https://doi.org/10.5194/hess-23-971-2019, 2019
Martijn Westhoff, Axel Kleidon, Stan Schymanski, Benjamin Dewals, Femke Nijsse, Maik Renner, Henk Dijkstra, Hisashi Ozawa, Hubert Savenije, Han Dolman, Antoon Meesters, and Erwin Zehe
Earth Syst. Dynam. Discuss., https://doi.org/10.5194/esd-2019-6, https://doi.org/10.5194/esd-2019-6, 2019
Publication in ESD not foreseen
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Even models relying on physical laws have parameters that need to be measured or estimated. Thermodynamic optimality principles potentially offer a way to reduce the number of estimated parameters by stating that a system evolves to an optimum state. These principles have been applied successfully within the Earth system, but it is often unclear what to optimize and how. In this review paper we identify commonalities between different successful applications as well as some doubtful applications.
Hongkai Gao, Christian Birkel, Markus Hrachowitz, Doerthe Tetzlaff, Chris Soulsby, and Hubert H. G. Savenije
Hydrol. Earth Syst. Sci., 23, 787–809, https://doi.org/10.5194/hess-23-787-2019, https://doi.org/10.5194/hess-23-787-2019, 2019
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Supported by large-sample ecological observations, a novel, simple and topography-driven runoff generation module (HSC-MCT) was created. The HSC-MCT is calibration-free, and therefore it can be used to predict in ungauged basins, and has great potential to be generalized at the global scale. Also, it allows us to reproduce the variation of saturation areas, which has great potential to be used for broader hydrological, ecological, climatological, and biogeochemical studies.
Nevil Quinn, Günter Blöschl, András Bárdossy, Attilio Castellarin, Martyn Clark, Christophe Cudennec, Demetris Koutsoyiannis, Upmanu Lall, Lubomir Lichner, Juraj Parajka, Christa D. Peters-Lidard, Graham Sander, Hubert Savenije, Keith Smettem, Harry Vereecken, Alberto Viglione, Patrick Willems, Andy Wood, Ross Woods, Chong-Yu Xu, and Erwin Zehe
Proc. IAHS, 380, 3–8, https://doi.org/10.5194/piahs-380-3-2018, https://doi.org/10.5194/piahs-380-3-2018, 2018
Laurène Bouaziz, Albrecht Weerts, Jaap Schellekens, Eric Sprokkereef, Jasper Stam, Hubert Savenije, and Markus Hrachowitz
Hydrol. Earth Syst. Sci., 22, 6415–6434, https://doi.org/10.5194/hess-22-6415-2018, https://doi.org/10.5194/hess-22-6415-2018, 2018
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We quantify net intercatchment groundwater flows in the Meuse basin in a complementary three-step approach through (1) water budget accounting, (2) testing a set of conceptual hydrological models and (3) evaluating against remote sensing actual evaporation data. We show that net intercatchment groundwater flows can make up as much as 25 % of mean annual precipitation in the headwaters and should therefore be accounted for in conceptual models to prevent overestimating actual evaporation rates.
Dirk-Jan D. Kok, Saket Pande, Jules B. van Lier, Angela R. C. Ortigara, Hubert Savenije, and Stefan Uhlenbrook
Hydrol. Earth Syst. Sci., 22, 5781–5799, https://doi.org/10.5194/hess-22-5781-2018, https://doi.org/10.5194/hess-22-5781-2018, 2018
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Phosphorus (P) is important to global food security. Thus it is concerning that natural P reserves are predicted to deplete within the century. Here we explore the potential of P recovery from wastewater (WW) at global scale. We identify high production and demand sites to determine optimal market prices and trade flows. We show that 20 % of the agricultural demand can be met, yet only 4 % can be met economically. Nonetheless, this recovery stimulates circular economic development in WW treatment.
Nevil Quinn, Günter Blöschl, András Bárdossy, Attilio Castellarin, Martyn Clark, Christophe Cudennec, Demetris Koutsoyiannis, Upmanu Lall, Lubomir Lichner, Juraj Parajka, Christa D. Peters-Lidard, Graham Sander, Hubert Savenije, Keith Smettem, Harry Vereecken, Alberto Viglione, Patrick Willems, Andy Wood, Ross Woods, Chong-Yu Xu, and Erwin Zehe
Hydrol. Earth Syst. Sci., 22, 5735–5739, https://doi.org/10.5194/hess-22-5735-2018, https://doi.org/10.5194/hess-22-5735-2018, 2018
César~Dionisio Jiménez-Rodríguez, Miriam Coenders-Gerrits, Thom Bogaard, Erika Vatiero, and Hubert Savenije
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2018-538, https://doi.org/10.5194/hess-2018-538, 2018
Manuscript not accepted for further review
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The measurement of stable isotopes in water vapor has been improved with the use of laser technologies. Its direct application in the field depends on the availability of infrastructure or the budget of the project. For those cases when it is not possible, we provide an alternative method to sample the air for its later measurement. This method is based on the use of a low-cost polyethylene bag, getting stable measurements with a volume of 450 mL of air reducing the risk of sample deterioration.
Petra Hulsman, Thom A. Bogaard, and Hubert H. G. Savenije
Hydrol. Earth Syst. Sci., 22, 5081–5095, https://doi.org/10.5194/hess-22-5081-2018, https://doi.org/10.5194/hess-22-5081-2018, 2018
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In many river basins, the development of hydrological models is challenged by poor discharge data availability and quality. In contrast, water level data are more reliable, as these are direct measurements and are unprocessed. In this study, an alternative calibration method is presented using water-level time series and the Strickler–Manning formula instead of discharge. This is applied to a semi-distributed rainfall-runoff model for the semi-arid, poorly gauged Mara River basin in Kenya.
Lan Wang-Erlandsson, Ingo Fetzer, Patrick W. Keys, Ruud J. van der Ent, Hubert H. G. Savenije, and Line J. Gordon
Hydrol. Earth Syst. Sci., 22, 4311–4328, https://doi.org/10.5194/hess-22-4311-2018, https://doi.org/10.5194/hess-22-4311-2018, 2018
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Winds carry air moisture from one place to another. Thus, land-use change that alters air moisture content can also modify downwind rainfall and distant river flows. This aspect has rarely been taken into account in studies of river flow changes. We show here that remote land-use change effect on rainfall can exceed that of local, and that foreign nation influence on river flows is much more prevalent than previously thought. This has important implications for both land and water governance.
Huayang Cai, Marco Toffolon, Hubert H. G. Savenije, Qingshu Yang, and Erwan Garel
Ocean Sci., 14, 769–782, https://doi.org/10.5194/os-14-769-2018, https://doi.org/10.5194/os-14-769-2018, 2018
Stefanie R. Lutz, Andrea Popp, Tim van Emmerik, Tom Gleeson, Liz Kalaugher, Karsten Möbius, Tonie Mudde, Brett Walton, Rolf Hut, Hubert Savenije, Louise J. Slater, Anna Solcerova, Cathelijne R. Stoof, and Matthias Zink
Hydrol. Earth Syst. Sci., 22, 3589–3599, https://doi.org/10.5194/hess-22-3589-2018, https://doi.org/10.5194/hess-22-3589-2018, 2018
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Media play a key role in the communication between scientists and the general public. However, the interaction between scientists and journalists is not always straightforward. In this opinion paper, we present insights from hydrologists and journalists into the benefits, aftermath and potential pitfalls of science–media interaction. We aim to encourage scientists to participate in the diverse and evolving media landscape, and we call on the scientific community to support scientists who do so.
Fabiola Murguia-Flores, Sandra Arndt, Anita L. Ganesan, Guillermo Murray-Tortarolo, and Edward R. C. Hornibrook
Geosci. Model Dev., 11, 2009–2032, https://doi.org/10.5194/gmd-11-2009-2018, https://doi.org/10.5194/gmd-11-2009-2018, 2018
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Soil bacteria known as methanotrophs are the only biological sink for atmospheric methane (CH4). Their activity depends on climatic and edaphic conditions, thus varies spatially and temporarily. Based on this, we developed a model (MeMo v1.0) to assess the global CH4 consumption by soils. The global CH4 uptake was 33.5 Tg CH4 yr-1 for 1990–2009, with an increasing trend of 0.1 Tg CH4 yr-2. The regional analysis proved that warm and semiarid regions represent the most efficient CH4 sink.
Alizée Roobaert, Goulven G. Laruelle, Peter Landschützer, and Pierre Regnier
Biogeosciences, 15, 1701–1720, https://doi.org/10.5194/bg-15-1701-2018, https://doi.org/10.5194/bg-15-1701-2018, 2018
Hubert H. G. Savenije
Hydrol. Earth Syst. Sci., 22, 1911–1916, https://doi.org/10.5194/hess-22-1911-2018, https://doi.org/10.5194/hess-22-1911-2018, 2018
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This paper provides the connection between two simple equations describing groundwater flow at different scales: the Darcy equation describes groundwater flow at pore scale, the linear reservoir equation at catchment scale. The connection between the two appears to be very simple. The two parameters of the equations are proportional, depending on the porosity of the subsoil and the resistance for the groundwater to enter the surface drainage network.
Zhilin Zhang and Hubert H. G. Savenije
Earth Syst. Dynam., 9, 241–247, https://doi.org/10.5194/esd-9-241-2018, https://doi.org/10.5194/esd-9-241-2018, 2018
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This paper presents a new equation for the dispersion of salinity in alluvial estuaries based on the maximum power concept. The new equation is physically based and replaces previous empirical equations. It is very useful for application in practice because in contrast to previous methods it no longer requires a calibration parameter, turning the method into a predictive method. The paper presents successful applications in more than 23 estuaries in different parts of the world.
Dirk-Jan Daniel Kok, Saket Pande, Angela Renata Cordeiro Ortigara, Hubert Savenije, and Stefan Uhlenbrook
Proc. IAHS, 376, 83–86, https://doi.org/10.5194/piahs-376-83-2018, https://doi.org/10.5194/piahs-376-83-2018, 2018
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Phosphorus is necessary for the development of crops and is therefore essential in safeguarding our food security. Several studies predict that our rock phosphate reserves, used to create synthetic, phosphatic fertilizers, may become depleted within this century. This study roughly approximates for which areas in Africa we can instead recover phosphorus from wastewater in order to reduce our dependancy on unsustainable rock phosphate.
Bart Schilperoort, Miriam Coenders-Gerrits, Willem Luxemburg, César Jiménez Rodríguez, César Cisneros Vaca, and Hubert Savenije
Hydrol. Earth Syst. Sci., 22, 819–830, https://doi.org/10.5194/hess-22-819-2018, https://doi.org/10.5194/hess-22-819-2018, 2018
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Using the
DTStechnology, we measured the evaporation of a forest using fibre optic cables. The cables work like long thermometers, with a measurement every 12.5 cm. We placed the cables vertically along the tower, one cable being dry, the other kept wet. By looking at the dry and wet cable temperatures over the height we are able to study heat storage and the amount of water the forest is evaporating. These results can be used to better understand the storage and heat exchange of forests.
Axel Kleidon and Hubert H. G. Savenije
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2017-674, https://doi.org/10.5194/hess-2017-674, 2017
Revised manuscript not accepted
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At larger scales, the flow of rivers can often be described by a relatively simple, exponential decay, and it is unclear how such simple behaviour can be explained given that river basins show such vast complexity. Here, we use a highly idealised model to show that such simple behaviour can be explained by viewing it as the emergent consequence of the groundwater system (which feeds river flow) minimising its energy dissipation.
Goulven G. Laruelle, Peter Landschützer, Nicolas Gruber, Jean-Louis Tison, Bruno Delille, and Pierre Regnier
Biogeosciences, 14, 4545–4561, https://doi.org/10.5194/bg-14-4545-2017, https://doi.org/10.5194/bg-14-4545-2017, 2017
Jakob Zscheischler, Miguel D. Mahecha, Valerio Avitabile, Leonardo Calle, Nuno Carvalhais, Philippe Ciais, Fabian Gans, Nicolas Gruber, Jens Hartmann, Martin Herold, Kazuhito Ichii, Martin Jung, Peter Landschützer, Goulven G. Laruelle, Ronny Lauerwald, Dario Papale, Philippe Peylin, Benjamin Poulter, Deepak Ray, Pierre Regnier, Christian Rödenbeck, Rosa M. Roman-Cuesta, Christopher Schwalm, Gianluca Tramontana, Alexandra Tyukavina, Riccardo Valentini, Guido van der Werf, Tristram O. West, Julie E. Wolf, and Markus Reichstein
Biogeosciences, 14, 3685–3703, https://doi.org/10.5194/bg-14-3685-2017, https://doi.org/10.5194/bg-14-3685-2017, 2017
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Here we synthesize a wide range of global spatiotemporal observational data on carbon exchanges between the Earth surface and the atmosphere. A key challenge was to consistently combining observational products of terrestrial and aquatic surfaces. Our primary goal is to identify today’s key uncertainties and observational shortcomings that would need to be addressed in future measurement campaigns or expansions of in situ observatories.
Randal D. Koster, Alan K. Betts, Paul A. Dirmeyer, Marc Bierkens, Katrina E. Bennett, Stephen J. Déry, Jason P. Evans, Rong Fu, Felipe Hernandez, L. Ruby Leung, Xu Liang, Muhammad Masood, Hubert Savenije, Guiling Wang, and Xing Yuan
Hydrol. Earth Syst. Sci., 21, 3777–3798, https://doi.org/10.5194/hess-21-3777-2017, https://doi.org/10.5194/hess-21-3777-2017, 2017
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Large-scale hydrological variability can affect society in profound ways; floods and droughts, for example, often cause major damage and hardship. A recent gathering of hydrologists at a symposium to honor the career of Professor Eric Wood motivates the present survey of recent research on this variability. The surveyed literature and the illustrative examples provided in the paper show that research into hydrological variability continues to be strong, vibrant, and multifaceted.
Zhilin Zhang and Hubert H. G. Savenije
Hydrol. Earth Syst. Sci., 21, 3287–3305, https://doi.org/10.5194/hess-21-3287-2017, https://doi.org/10.5194/hess-21-3287-2017, 2017
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An estuary is where fresh water rivers meet the salty open sea. This mixture of salty fresh water leads to a varying water quality. There a model works well showing how far the salty water can travel, with an empirical parameter that needs to be calibrated every time. This paper provides a possible solution for this parameter to make the model predictive. Also, the model was improved by considering 2-D exchange flow. This new model was supported by observations in 18 estuaries around the world.
Goulven Gildas Laruelle, Nicolas Goossens, Sandra Arndt, Wei-Jun Cai, and Pierre Regnier
Biogeosciences, 14, 2441–2468, https://doi.org/10.5194/bg-14-2441-2017, https://doi.org/10.5194/bg-14-2441-2017, 2017
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The C-GEM generic reactive-transport model is applied to each tidal estuary of the US East Coast. Seasonal simulations are performed, which allows the understanding and quantification of the effect of the estuarine filter on the lateral fluxes of carbon coming from rivers.
Catchments as meta-organisms – a new blueprint for hydrological modelling
Hubert H. G. Savenije and Markus Hrachowitz
Hydrol. Earth Syst. Sci., 21, 1107–1116, https://doi.org/10.5194/hess-21-1107-2017, https://doi.org/10.5194/hess-21-1107-2017, 2017
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The natural environment that we live in is the result of evolution. This does not only apply to ecosystems, but also to the physical environment through which the water flows. This has resulted in the formation of flow patterns that obey sometimes surprisingly simple mathematical laws. Hydrological models should represent the physics of these patterns and should account for the fact that the ecosystem adjusts itself continuously to changing circumstances. Physics-based models are alive!
Tanja de Boer-Euser, Laurène Bouaziz, Jan De Niel, Claudia Brauer, Benjamin Dewals, Gilles Drogue, Fabrizio Fenicia, Benjamin Grelier, Jiri Nossent, Fernando Pereira, Hubert Savenije, Guillaume Thirel, and Patrick Willems
Hydrol. Earth Syst. Sci., 21, 423–440, https://doi.org/10.5194/hess-21-423-2017, https://doi.org/10.5194/hess-21-423-2017, 2017
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In this study, the rainfall–runoff models of eight international research groups were compared for a set of subcatchments of the Meuse basin to investigate the influence of certain model components on the modelled discharge. Although the models showed similar performances based on general metrics, clear differences could be observed for specific events. The differences during drier conditions could indeed be linked to differences in model structures.
Remko Nijzink, Christopher Hutton, Ilias Pechlivanidis, René Capell, Berit Arheimer, Jim Freer, Dawei Han, Thorsten Wagener, Kevin McGuire, Hubert Savenije, and Markus Hrachowitz
Hydrol. Earth Syst. Sci., 20, 4775–4799, https://doi.org/10.5194/hess-20-4775-2016, https://doi.org/10.5194/hess-20-4775-2016, 2016
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The core component of many hydrological systems, the moisture storage capacity available to vegetation, is typically treated as a calibration parameter in hydrological models and often considered to remain constant in time. In this paper we test the potential of a recently introduced method to robustly estimate catchment-scale root-zone storage capacities exclusively based on climate data to reproduce the temporal evolution of root-zone storage under change (deforestation).
James A. Bradley, Sandra Arndt, Marie Šabacká, Liane G. Benning, Gary L. Barker, Joshua J. Blacker, Marian L. Yallop, Katherine E. Wright, Christopher M. Bellas, Jonathan Telling, Martyn Tranter, and Alexandre M. Anesio
Biogeosciences, 13, 5677–5696, https://doi.org/10.5194/bg-13-5677-2016, https://doi.org/10.5194/bg-13-5677-2016, 2016
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Soil development following glacier retreat was characterized using a novel integrated field, laboratory and modelling approach in Svalbard. We found community shifts in bacteria, which were responsible for driving cycles in carbon and nutrients. Allochthonous inputs were also important in sustaining bacterial production. This study shows how an integrated model–data approach can improve understanding and obtain a more holistic picture of soil development in an increasingly ice-free future world.
Ali D. Abdullah, Jacqueline I. A. Gisen, Pieter van der Zaag, Hubert H. G. Savenije, Usama F. A. Karim, Ilyas Masih, and Ioana Popescu
Hydrol. Earth Syst. Sci., 20, 4031–4042, https://doi.org/10.5194/hess-20-4031-2016, https://doi.org/10.5194/hess-20-4031-2016, 2016
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A comprehensive and detailed data set of the salinity distribution over an entire year in a complex and dynamic (because heavily utilized and modified) deltaic river system was thoroughly analysed, and formed the basis for a validated analytical model that can predict the extent of seawater among other salinity sources in an estuary. The procedure can be applied to other estuaries.
Nutchanart Sriwongsitanon, Hongkai Gao, Hubert H. G. Savenije, Ekkarin Maekan, Sirikanya Saengsawang, and Sansarith Thianpopirug
Hydrol. Earth Syst. Sci., 20, 3361–3377, https://doi.org/10.5194/hess-20-3361-2016, https://doi.org/10.5194/hess-20-3361-2016, 2016
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We demonstrated that the readily available NDII remote sensing product is a very useful proxy for moisture storage in the root zone of vegetation. We compared the temporal variation of the NDII with the root zone storage in a hydrological model of eight catchments in the Upper Ping River in Thailand, yielding very good results. Having a reliable NDII product that can help us to estimate the actual moisture storage in catchments is a major contribution to prediction in ungauged basins.
Nadja I. den Besten, Saket Pande, and Hubert H. G. Savenije
Proc. IAHS, 373, 115–118, https://doi.org/10.5194/piahs-373-115-2016, https://doi.org/10.5194/piahs-373-115-2016, 2016
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Maharashtra is one of the states in India that has witnessed highest rates of farmer suicides as proportion of total number of suicides. We interpret the crisis using a socio-hydrological model in two adjoining regions in Maharashtra, Marathwada and Desh, with higher farmer suicide rates in the former. The analysis confirms existing narratives: low (soil) water storage capacities, no irrigation and access to alternative sources of incomes are to blame for the crisis.
Lan Wang-Erlandsson, Wim G. M. Bastiaanssen, Hongkai Gao, Jonas Jägermeyr, Gabriel B. Senay, Albert I. J. M. van Dijk, Juan P. Guerschman, Patrick W. Keys, Line J. Gordon, and Hubert H. G. Savenije
Hydrol. Earth Syst. Sci., 20, 1459–1481, https://doi.org/10.5194/hess-20-1459-2016, https://doi.org/10.5194/hess-20-1459-2016, 2016
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We present an "Earth observation-based" method for estimating root zone storage capacity – a critical parameter in land surface modelling that represents the maximum amount of soil moisture available for vegetation. Variability within a land cover type is captured, and a global model evaporation simulation is overall improved, particularly in sub-humid to humid regions with seasonality. This new method can eliminate the need for unreliable soil and root depth data in land surface modelling.
Huayang Cai, Hubert H. G. Savenije, Chenjuan Jiang, Lili Zhao, and Qingshu Yang
Hydrol. Earth Syst. Sci., 20, 1177–1195, https://doi.org/10.5194/hess-20-1177-2016, https://doi.org/10.5194/hess-20-1177-2016, 2016
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In this paper, an analytical model for tide-river dynamics has been used to understand the influence of tide and fresh water discharge on the rise of mean water level along the estuary, which remains poorly understood. It is shown that the mean water level is influenced primarily by the tide-river interaction in the tide-dominated region, while it is mainly controlled by the river flow in the upstream part of the estuary.
Remko C. Nijzink, Luis Samaniego, Juliane Mai, Rohini Kumar, Stephan Thober, Matthias Zink, David Schäfer, Hubert H. G. Savenije, and Markus Hrachowitz
Hydrol. Earth Syst. Sci., 20, 1151–1176, https://doi.org/10.5194/hess-20-1151-2016, https://doi.org/10.5194/hess-20-1151-2016, 2016
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The heterogeneity of landscapes in river basins strongly affects the hydrological response. In this study, the distributed mesoscale Hydrologic Model (mHM) was equipped with additional processes identified by landscapes within one modelling cell. Seven study catchments across Europe were selected to test the value of this additional sub-grid heterogeneity. In addition, the models were constrained based on expert knowledge. Generally, the modifications improved the representation of low flows.
Demetris Koutsoyiannis, Günter Blöschl, András Bárdossy, Christophe Cudennec, Denis Hughes, Alberto Montanari, Insa Neuweiler, and Hubert Savenije
Hydrol. Earth Syst. Sci., 20, 1081–1084, https://doi.org/10.5194/hess-20-1081-2016, https://doi.org/10.5194/hess-20-1081-2016, 2016
Chiara Volta, Goulven Gildas Laruelle, Sandra Arndt, and Pierre Regnier
Hydrol. Earth Syst. Sci., 20, 991–1030, https://doi.org/10.5194/hess-20-991-2016, https://doi.org/10.5194/hess-20-991-2016, 2016
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A generic estuarine model is applied to three idealized tidal estuaries representing the main hydro-geometrical estuarine classes. The study provides insight into the estuarine biogeochemical dynamics, in particular the air-water CO2/sub> flux, as well as the potential response to future environmental changes and to uncertainties in model parameter values. We believe that our approach could help improving upscaling strategies to better integrate estuaries in regional/global biogeochemical studies.
J. A. Bradley, A. M. Anesio, J. S. Singarayer, M. R. Heath, and S. Arndt
Geosci. Model Dev., 8, 3441–3470, https://doi.org/10.5194/gmd-8-3441-2015, https://doi.org/10.5194/gmd-8-3441-2015, 2015
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Recent climate warming causing ice retreat exposes new terrestrial ecosystems that have potentially significant yet largely unexplored roles on large-scale biogeochemical cycling and climate. SHIMMER (Soil biogeocHemIcal Model for Microbial Ecosystem Response) is a new numerical model designed to simulate microbial community establishment and elemental cycling (C, N and P) during initial soil formation in exposed glacier forefields. It is also transferable to other extreme ecosystem types.
J. I. A. Gisen, H. H. G. Savenije, and R. C. Nijzink
Hydrol. Earth Syst. Sci., 19, 2791–2803, https://doi.org/10.5194/hess-19-2791-2015, https://doi.org/10.5194/hess-19-2791-2015, 2015
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We revised the predictive equations for two calibrated parameters in salt intrusion model (the Van der Burgh coefficient K and dispersion coefficient D) using an extended database of 89 salinity profiles including 8 newly conducted salinity measurements. The revised predictive equations consist of easily measured parameters such as the geometry of estuary, tide, friction and the Richardson number. These equations are useful in obtaining the first estimate of salinity distribution in an estuary.
D. Diederen, H. H. G. Savenije, and M. Toffolon
Ocean Sci. Discuss., https://doi.org/10.5194/osd-12-925-2015, https://doi.org/10.5194/osd-12-925-2015, 2015
Revised manuscript not accepted
C. Le Quéré, R. Moriarty, R. M. Andrew, G. P. Peters, P. Ciais, P. Friedlingstein, S. D. Jones, S. Sitch, P. Tans, A. Arneth, T. A. Boden, L. Bopp, Y. Bozec, J. G. Canadell, L. P. Chini, F. Chevallier, C. E. Cosca, I. Harris, M. Hoppema, R. A. Houghton, J. I. House, A. K. Jain, T. Johannessen, E. Kato, R. F. Keeling, V. Kitidis, K. Klein Goldewijk, C. Koven, C. S. Landa, P. Landschützer, A. Lenton, I. D. Lima, G. Marland, J. T. Mathis, N. Metzl, Y. Nojiri, A. Olsen, T. Ono, S. Peng, W. Peters, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. E. Salisbury, U. Schuster, J. Schwinger, R. Séférian, J. Segschneider, T. Steinhoff, B. D. Stocker, A. J. Sutton, T. Takahashi, B. Tilbrook, G. R. van der Werf, N. Viovy, Y.-P. Wang, R. Wanninkhof, A. Wiltshire, and N. Zeng
Earth Syst. Sci. Data, 7, 47–85, https://doi.org/10.5194/essd-7-47-2015, https://doi.org/10.5194/essd-7-47-2015, 2015
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Carbon dioxide (CO2) emissions from human activities (burning fossil fuels and cement production, deforestation and other land-use change) are set to rise again in 2014.
This study (updated yearly) makes an accurate assessment of anthropogenic CO2 emissions and their redistribution between the atmosphere, ocean, and terrestrial biosphere in order to better understand the global carbon cycle, support the development of climate policies, and project future climate change.
S. Pande, L. Arkesteijn, H. Savenije, and L. A. Bastidas
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hessd-12-3945-2015, https://doi.org/10.5194/hessd-12-3945-2015, 2015
Revised manuscript not accepted
G. G. Laruelle, R. Lauerwald, J. Rotschi, P. A. Raymond, J. Hartmann, and P. Regnier
Biogeosciences, 12, 1447–1458, https://doi.org/10.5194/bg-12-1447-2015, https://doi.org/10.5194/bg-12-1447-2015, 2015
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This study quantifies the exchange of carbon dioxide (CO2) between the atmosphere and the land-ocean aquatic continuum (LOAC) of the northeast North American coast, which consists of rivers, estuaries, and the coastal ocean. Our analysis reveals significant variations of the flux intensity both in time and space across the study area. Ice cover, snowmelt, and the intensity of the estuarine filter are identified as important control factors of the CO2 exchange along the LOAC.
J. D. Edixhoven, J. Gupta, and H. H. G. Savenije
Earth Syst. Dynam., 5, 491–507, https://doi.org/10.5194/esd-5-491-2014, https://doi.org/10.5194/esd-5-491-2014, 2014
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Phosphate rock is a finite resource required for fertilizer production. Following a debate over the PR depletion timeline, global PR reserves were recently increased 4-fold based mainly on a restatement of Moroccan reserves. We review whether this restatement is methodologically compatible with resource terminology used in major resource classifications, whether resource classification nomenclature is sufficiently understood in the literature, and whether the recent restatements are reliable.
S. Gharari, M. Hrachowitz, F. Fenicia, H. Gao, and H. H. G. Savenije
Hydrol. Earth Syst. Sci., 18, 4839–4859, https://doi.org/10.5194/hess-18-4839-2014, https://doi.org/10.5194/hess-18-4839-2014, 2014
S. Gharari, M. Shafiei, M. Hrachowitz, R. Kumar, F. Fenicia, H. V. Gupta, and H. H. G. Savenije
Hydrol. Earth Syst. Sci., 18, 4861–4870, https://doi.org/10.5194/hess-18-4861-2014, https://doi.org/10.5194/hess-18-4861-2014, 2014
L. Wang-Erlandsson, R. J. van der Ent, L. J. Gordon, and H. H. G. Savenije
Earth Syst. Dynam., 5, 441–469, https://doi.org/10.5194/esd-5-441-2014, https://doi.org/10.5194/esd-5-441-2014, 2014
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We investigate the temporal characteristics of partitioned evaporation on land, and we present STEAM (Simple Terrestrial Evaporation to Atmosphere Model) -- a hydrological land-surface model developed to provide inputs to moisture tracking. The terrestrial residence timescale of transpiration (days to months) has larger inter-seasonal variation and is substantially longer than that of interception (hours). This can cause differences in moisture recycling, which is investigated more in Part 2.
R. J. van der Ent, L. Wang-Erlandsson, P. W. Keys, and H. H. G. Savenije
Earth Syst. Dynam., 5, 471–489, https://doi.org/10.5194/esd-5-471-2014, https://doi.org/10.5194/esd-5-471-2014, 2014
T. H. M. van Emmerik, Z. Li, M. Sivapalan, S. Pande, J. Kandasamy, H. H. G. Savenije, A. Chanan, and S. Vigneswaran
Hydrol. Earth Syst. Sci., 18, 4239–4259, https://doi.org/10.5194/hess-18-4239-2014, https://doi.org/10.5194/hess-18-4239-2014, 2014
H. Cai, H. H. G. Savenije, and C. Jiang
Hydrol. Earth Syst. Sci., 18, 4153–4168, https://doi.org/10.5194/hess-18-4153-2014, https://doi.org/10.5194/hess-18-4153-2014, 2014
M. Valk, H. H. G. Savenije, C. C. J. M. Tiberius, and W. M. J. Luxemburg
Hydrol. Earth Syst. Sci., 18, 2599–2613, https://doi.org/10.5194/hess-18-2599-2014, https://doi.org/10.5194/hess-18-2599-2014, 2014
G. Blöschl, A. Bárdossy, D. Koutsoyiannis, Z. W. Kundzewicz, I. Littlewood, A. Montanari, and H. Savenije
Hydrol. Earth Syst. Sci., 18, 2433–2435, https://doi.org/10.5194/hess-18-2433-2014, https://doi.org/10.5194/hess-18-2433-2014, 2014
C. Le Quéré, G. P. Peters, R. J. Andres, R. M. Andrew, T. A. Boden, P. Ciais, P. Friedlingstein, R. A. Houghton, G. Marland, R. Moriarty, S. Sitch, P. Tans, A. Arneth, A. Arvanitis, D. C. E. Bakker, L. Bopp, J. G. Canadell, L. P. Chini, S. C. Doney, A. Harper, I. Harris, J. I. House, A. K. Jain, S. D. Jones, E. Kato, R. F. Keeling, K. Klein Goldewijk, A. Körtzinger, C. Koven, N. Lefèvre, F. Maignan, A. Omar, T. Ono, G.-H. Park, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. Schwinger, J. Segschneider, B. D. Stocker, T. Takahashi, B. Tilbrook, S. van Heuven, N. Viovy, R. Wanninkhof, A. Wiltshire, and S. Zaehle
Earth Syst. Sci. Data, 6, 235–263, https://doi.org/10.5194/essd-6-235-2014, https://doi.org/10.5194/essd-6-235-2014, 2014
H. Gao, M. Hrachowitz, F. Fenicia, S. Gharari, and H. H. G. Savenije
Hydrol. Earth Syst. Sci., 18, 1895–1915, https://doi.org/10.5194/hess-18-1895-2014, https://doi.org/10.5194/hess-18-1895-2014, 2014
S. Pande, L. Arkesteijn, H. H. G. Savenije, and L. A. Bastidas
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hessd-11-2555-2014, https://doi.org/10.5194/hessd-11-2555-2014, 2014
Manuscript not accepted for further review
H. H. G. Savenije, A. Y. Hoekstra, and P. van der Zaag
Hydrol. Earth Syst. Sci., 18, 319–332, https://doi.org/10.5194/hess-18-319-2014, https://doi.org/10.5194/hess-18-319-2014, 2014
H. Cai, H. H. G. Savenije, and M. Toffolon
Hydrol. Earth Syst. Sci., 18, 287–304, https://doi.org/10.5194/hess-18-287-2014, https://doi.org/10.5194/hess-18-287-2014, 2014
R. J. van der Ent, O. A. Tuinenburg, H.-R. Knoche, H. Kunstmann, and H. H. G. Savenije
Hydrol. Earth Syst. Sci., 17, 4869–4884, https://doi.org/10.5194/hess-17-4869-2013, https://doi.org/10.5194/hess-17-4869-2013, 2013
B. M. C. Fischer, M. L. Mul, and H. H. G. Savenije
Hydrol. Earth Syst. Sci., 17, 2161–2170, https://doi.org/10.5194/hess-17-2161-2013, https://doi.org/10.5194/hess-17-2161-2013, 2013
G. G. Laruelle, H. H. Dürr, R. Lauerwald, J. Hartmann, C. P. Slomp, N. Goossens, and P. A. G. Regnier
Hydrol. Earth Syst. Sci., 17, 2029–2051, https://doi.org/10.5194/hess-17-2029-2013, https://doi.org/10.5194/hess-17-2029-2013, 2013
T. Euser, H. C. Winsemius, M. Hrachowitz, F. Fenicia, S. Uhlenbrook, and H. H. G. Savenije
Hydrol. Earth Syst. Sci., 17, 1893–1912, https://doi.org/10.5194/hess-17-1893-2013, https://doi.org/10.5194/hess-17-1893-2013, 2013
A. M. J. Coenders-Gerrits, L. Hopp, H. H. G. Savenije, and L. Pfister
Hydrol. Earth Syst. Sci., 17, 1749–1763, https://doi.org/10.5194/hess-17-1749-2013, https://doi.org/10.5194/hess-17-1749-2013, 2013
M. Hrachowitz, H. Savenije, T. A. Bogaard, D. Tetzlaff, and C. Soulsby
Hydrol. Earth Syst. Sci., 17, 533–564, https://doi.org/10.5194/hess-17-533-2013, https://doi.org/10.5194/hess-17-533-2013, 2013
V. Krumins, M. Gehlen, S. Arndt, P. Van Cappellen, and P. Regnier
Biogeosciences, 10, 371–398, https://doi.org/10.5194/bg-10-371-2013, https://doi.org/10.5194/bg-10-371-2013, 2013
Related subject area
Biogeosciences
EAT v1.0.0: a 1D test bed for physical–biogeochemical data assimilation in natural waters
Using deep learning to integrate paleoclimate and global biogeochemistry over the Phanerozoic Eon
Modelling boreal forest's mineral soil and peat C dynamics with the Yasso07 model coupled with the Ricker moisture modifier
Dynamic ecosystem assembly and escaping the “fire trap” in the tropics: insights from FATES_15.0.0
In silico calculation of soil pH by SCEPTER v1.0
Simple process-led algorithms for simulating habitats (SPLASH v.2.0): robust calculations of water and energy fluxes
A global behavioural model of human fire use and management: WHAM! v1.0
Terrestrial Ecosystem Model in R (TEMIR) version 1.0: simulating ecophysiological responses of vegetation to atmospheric chemical and meteorological changes
biospheremetrics v1.0.2: an R package to calculate two complementary terrestrial biosphere integrity indicators – human colonization of the biosphere (BioCol) and risk of ecosystem destabilization (EcoRisk)
Modeling boreal forest soil dynamics with the microbially explicit soil model MIMICS+ (v1.0)
Optimal enzyme allocation leads to the constrained enzyme hypothesis: the Soil Enzyme Steady Allocation Model (SESAM; v3.1)
Implementing a dynamic representation of fire and harvest including subgrid-scale heterogeneity in the tile-based land surface model CLASSIC v1.45
Inferring the tree regeneration niche from inventory data using a dynamic forest model
Quantifying the role of ozone-caused damage to vegetation in the Earth system: A new parameterization scheme for photosynthetic and stomatal responses
Optimising CH4 simulations from the LPJ-GUESS model v4.1 using an adaptive Markov chain Monte Carlo algorithm
Impacts of land-use change on biospheric carbon: an oriented benchmark using ORCHIDEE land surface model
DeepPhenoMem V1.0: Deep learning modelling of canopy greenness dynamics accounting for multi-variate meteorological memory effects on vegetation phenology
The XSO framework (v0.1) and Phydra library (v0.1) for a flexible, reproducible, and integrated plankton community modeling environment in Python
Exploring the Potential of History Matching for Land Surface Model Calibration
AgriCarbon-EO v1.0.1: large-scale and high-resolution simulation of carbon fluxes by assimilation of Sentinel-2 and Landsat-8 reflectances using a Bayesian approach
SAMM version 1.0: a numerical model for microbial- mediated soil aggregate formation
A model of the within-population variability of budburst in forest trees
Computationally efficient parameter estimation for high-dimensional ocean biogeochemical models
Radiocarbon analysis reveals underestimation of soil organic carbon persistence in new-generation soil models
The community-centered freshwater biogeochemistry model unified RIVE v1.0: a unified version for water column
Observation-based sowing dates and cultivars significantly affect yield and irrigation for some crops in the Community Land Model (CLM5)
The statistical emulators of GGCMI phase 2: responses of year-to-year variation of crop yield to CO2, temperature, water, and nitrogen perturbations
A novel Eulerian model based on central moments to simulate age and reactivity continua interacting with mixing processes
AdaScape 1.0: a coupled modelling tool to investigate the links between tectonics, climate, and biodiversity
An along-track Biogeochemical Argo modelling framework: a case study of model improvements for the Nordic seas
Peatland-VU-NUCOM (PVN 1.0): using dynamic plant functional types to model peatland vegetation, CH4, and CO2 emissions
Quantification of hydraulic trait control on plant hydrodynamics and risk of hydraulic failure within a demographic structured vegetation model in a tropical forest (FATES–HYDRO V1.0)
SedTrace 1.0: a Julia-based framework for generating and running reactive-transport models of marine sediment diagenesis specializing in trace elements and isotopes
A high-resolution marine mercury model MITgcm-ECCO2-Hg with online biogeochemistry
Improving nitrogen cycling in a land surface model (CLM5) to quantify soil N2O, NO, and NH3 emissions from enhanced rock weathering with croplands
Assimilation of Carbonyl Sulfide (COS) fluxes within the adjoint-based data assimilation system–Nanjing University Carbon Assimilation System (NUCAS v1.0)
Ocean biogeochemistry in the coupled ocean–sea ice–biogeochemistry model FESOM2.1–REcoM3
Forcing the Global Fire Emissions Database burned-area dataset into the Community Land Model version 5.0: impacts on carbon and water fluxes at high latitudes
Modeling of non-structural carbohydrate dynamics by the spatially explicit individual-based dynamic global vegetation model SEIB-DGVM (SEIB-DGVM-NSC version 1.0)
Implementing a coral reef CaCO3 production module in the iLOVECLIM climate model
MEDFATE 2.9.3: a trait-enabled model to simulate Mediterranean forest function and dynamics at regional scales
Modelling the role of livestock grazing in C and N cycling in grasslands with LPJmL5.0-grazing
Implementation of trait-based ozone plant sensitivity in the Yale Interactive terrestrial Biosphere model v1.0 to assess global vegetation damage
The Permafrost and Organic LayEr module for Forest Models (POLE-FM) 1.0
CompLaB v1.0: a scalable pore-scale model for flow, biogeochemistry, microbial metabolism, and biofilm dynamics
Validation of a new spatially explicit process-based model (HETEROFOR) to simulate structurally and compositionally complex forest stands in eastern North America
Global agricultural ammonia emissions simulated with the ORCHIDEE land surface model
ForamEcoGEnIE 2.0: incorporating symbiosis and spine traits into a trait-based global planktic foraminiferal model
FABM-NflexPD 2.0: testing an instantaneous acclimation approach for modeling the implications of phytoplankton eco-physiology for the carbon and nutrient cycles
Evaluating the vegetation–atmosphere coupling strength of ORCHIDEE land surface model (v7266)
Jorn Bruggeman, Karsten Bolding, Lars Nerger, Anna Teruzzi, Simone Spada, Jozef Skákala, and Stefano Ciavatta
Geosci. Model Dev., 17, 5619–5639, https://doi.org/10.5194/gmd-17-5619-2024, https://doi.org/10.5194/gmd-17-5619-2024, 2024
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To understand and predict the ocean’s capacity for carbon sequestration, its ability to supply food, and its response to climate change, we need the best possible estimate of its physical and biogeochemical properties. This is obtained through data assimilation which blends numerical models and observations. We present the Ensemble and Assimilation Tool (EAT), a flexible and efficient test bed that allows any scientist to explore and further develop the state of the art in data assimilation.
Dongyu Zheng, Andrew S. Merdith, Yves Goddéris, Yannick Donnadieu, Khushboo Gurung, and Benjamin J. W. Mills
Geosci. Model Dev., 17, 5413–5429, https://doi.org/10.5194/gmd-17-5413-2024, https://doi.org/10.5194/gmd-17-5413-2024, 2024
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This study uses a deep learning method to upscale the time resolution of paleoclimate simulations to 1 million years. This improved resolution allows a climate-biogeochemical model to more accurately predict climate shifts. The method may be critical in developing new fully continuous methods that are able to be applied over a moving continental surface in deep time with high resolution at reasonable computational expense.
Boris Ťupek, Aleksi Lehtonen, Alla Yurova, Rose Abramoff, Bertrand Guenet, Elisa Bruni, Samuli Launiainen, Mikko Peltoniemi, Shoji Hashimoto, Xianglin Tian, Juha Heikkinen, Kari Minkkinen, and Raisa Mäkipää
Geosci. Model Dev., 17, 5349–5367, https://doi.org/10.5194/gmd-17-5349-2024, https://doi.org/10.5194/gmd-17-5349-2024, 2024
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Updating the Yasso07 soil C model's dependency on decomposition with a hump-shaped Ricker moisture function improved modelled soil organic C (SOC) stocks in a catena of mineral and organic soils in boreal forest. The Ricker function, set to peak at a rate of 1 and calibrated against SOC and CO2 data using a Bayesian approach, showed a maximum in well-drained soils. Using SOC and CO2 data together with the moisture only from the topsoil humus was crucial for accurate model estimates.
Jacquelyn K. Shuman, Rosie A. Fisher, Charles Koven, Ryan Knox, Lara Kueppers, and Chonggang Xu
Geosci. Model Dev., 17, 4643–4671, https://doi.org/10.5194/gmd-17-4643-2024, https://doi.org/10.5194/gmd-17-4643-2024, 2024
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We adapt a fire behavior and effects module for use in a size-structured vegetation demographic model to test how climate, fire regime, and fire-tolerance plant traits interact to determine the distribution of tropical forests and grasslands. Our model captures the connection between fire disturbance and plant fire-tolerance strategies in determining plant distribution and provides a useful tool for understanding the vulnerability of these areas under changing conditions across the tropics.
Yoshiki Kanzaki, Isabella Chiaravalloti, Shuang Zhang, Noah J. Planavsky, and Christopher T. Reinhard
Geosci. Model Dev., 17, 4515–4532, https://doi.org/10.5194/gmd-17-4515-2024, https://doi.org/10.5194/gmd-17-4515-2024, 2024
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Soil pH is one of the most commonly measured agronomical and biogeochemical indices, mostly reflecting exchangeable acidity. Explicit simulation of both porewater and bulk soil pH is thus crucial to the accurate evaluation of alkalinity required to counteract soil acidification and the resulting capture of anthropogenic carbon dioxide through the enhanced weathering technique. This has been enabled by the updated reactive–transport SCEPTER code and newly developed framework to simulate soil pH.
David Sandoval, Iain Colin Prentice, and Rodolfo L. B. Nóbrega
Geosci. Model Dev., 17, 4229–4309, https://doi.org/10.5194/gmd-17-4229-2024, https://doi.org/10.5194/gmd-17-4229-2024, 2024
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Numerous estimates of water and energy balances depend on empirical equations requiring site-specific calibration, posing risks of "the right answers for the wrong reasons". We introduce novel first-principles formulations to calculate key quantities without requiring local calibration, matching predictions from complex land surface models.
Oliver Perkins, Matthew Kasoar, Apostolos Voulgarakis, Cathy Smith, Jay Mistry, and James D. A. Millington
Geosci. Model Dev., 17, 3993–4016, https://doi.org/10.5194/gmd-17-3993-2024, https://doi.org/10.5194/gmd-17-3993-2024, 2024
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Wildfire is often presented in the media as a danger to human life. Yet globally, millions of people’s livelihoods depend on using fire as a tool. So, patterns of fire emerge from interactions between humans, land use, and climate. This complexity means scientists cannot yet reliably say how fire will be impacted by climate change. So, we developed a new model that represents globally how people use and manage fire. The model reveals the extent and diversity of how humans live with and use fire.
Amos P. K. Tai, David H. Y. Yung, and Timothy Lam
Geosci. Model Dev., 17, 3733–3764, https://doi.org/10.5194/gmd-17-3733-2024, https://doi.org/10.5194/gmd-17-3733-2024, 2024
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We have developed the Terrestrial Ecosystem Model in R (TEMIR), which simulates plant carbon and pollutant uptake and predicts their response to varying atmospheric conditions. This model is designed to couple with an atmospheric chemistry model so that questions related to plant–atmosphere interactions, such as the effects of climate change, rising CO2, and ozone pollution on forest carbon uptake, can be addressed. The model has been well validated with both ground and satellite observations.
Fabian Stenzel, Johanna Braun, Jannes Breier, Karlheinz Erb, Dieter Gerten, Jens Heinke, Sarah Matej, Sebastian Ostberg, Sibyll Schaphoff, and Wolfgang Lucht
Geosci. Model Dev., 17, 3235–3258, https://doi.org/10.5194/gmd-17-3235-2024, https://doi.org/10.5194/gmd-17-3235-2024, 2024
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We provide an R package to compute two biosphere integrity metrics that can be applied to simulations of vegetation growth from the dynamic global vegetation model LPJmL. The pressure metric BioCol indicates that we humans modify and extract > 20 % of the potential preindustrial natural biomass production. The ecosystems state metric EcoRisk shows a high risk of ecosystem destabilization in many regions as a result of climate change and land, water, and fertilizer use.
Elin Ristorp Aas, Heleen A. de Wit, and Terje K. Berntsen
Geosci. Model Dev., 17, 2929–2959, https://doi.org/10.5194/gmd-17-2929-2024, https://doi.org/10.5194/gmd-17-2929-2024, 2024
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By including microbial processes in soil models, we learn how the soil system interacts with its environment and responds to climate change. We present a soil process model, MIMICS+, which is able to reproduce carbon stocks found in boreal forest soils better than a conventional land model. With the model we also find that when adding nitrogen, the relationship between soil microbes changes notably. Coupling the model to a vegetation model will allow for further study of these mechanisms.
Thomas Wutzler, Christian Reimers, Bernhard Ahrens, and Marion Schrumpf
Geosci. Model Dev., 17, 2705–2725, https://doi.org/10.5194/gmd-17-2705-2024, https://doi.org/10.5194/gmd-17-2705-2024, 2024
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Soil microbes provide a strong link for elemental fluxes in the earth system. The SESAM model applies an optimality assumption to model those linkages and their adaptation. We found that a previous heuristic description was a special case of a newly developed more rigorous description. The finding of new behaviour at low microbial biomass led us to formulate the constrained enzyme hypothesis. We now can better describe how microbially mediated linkages of elemental fluxes adapt across decades.
Salvatore R. Curasi, Joe R. Melton, Elyn R. Humphreys, Txomin Hermosilla, and Michael A. Wulder
Geosci. Model Dev., 17, 2683–2704, https://doi.org/10.5194/gmd-17-2683-2024, https://doi.org/10.5194/gmd-17-2683-2024, 2024
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Canadian forests are responding to fire, harvest, and climate change. Models need to quantify these processes and their carbon and energy cycling impacts. We develop a scheme that, based on satellite records, represents fire, harvest, and the sparsely vegetated areas that these processes generate. We evaluate model performance and demonstrate the impacts of disturbance on carbon and energy cycling. This work has implications for land surface modeling and assessing Canada’s terrestrial C cycle.
Yannek Käber, Florian Hartig, and Harald Bugmann
Geosci. Model Dev., 17, 2727–2753, https://doi.org/10.5194/gmd-17-2727-2024, https://doi.org/10.5194/gmd-17-2727-2024, 2024
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Many forest models include detailed mechanisms of forest growth and mortality, but regeneration is often simplified. Testing and improving forest regeneration models is challenging. We address this issue by exploring how forest inventories from unmanaged European forests can be used to improve such models. We find that competition for light among trees is captured by the model, unknown model components can be informed by forest inventory data, and climatic effects are challenging to capture.
Fang Li, Zhimin Zhou, Samuel Levis, Stephen Sitch, Felicity Hayes, Zhaozhong Feng, Peter Reich, Zhiyi Zhao, and Yanqing Zhou
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-6, https://doi.org/10.5194/gmd-2024-6, 2024
Revised manuscript accepted for GMD
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This study introduces a new scheme to simulate surface ozone damage to vegetation in regional and global process-based models. Based on 4210 data points from ozone experiments, it accurately reproduces statistically significant linear or nonlinear photosynthetic and stomatal response to ozone in observations for all vegetation types. It also enables models to implicitly capture the variability in plant ozone tolerance and the shift among species within a vegetation type.
Jalisha T. Kallingal, Johan Lindström, Paul A. Miller, Janne Rinne, Maarit Raivonen, and Marko Scholze
Geosci. Model Dev., 17, 2299–2324, https://doi.org/10.5194/gmd-17-2299-2024, https://doi.org/10.5194/gmd-17-2299-2024, 2024
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By unlocking the mysteries of CH4 emissions from wetlands, our work improved the accuracy of the LPJ-GUESS vegetation model using Bayesian statistics. Via assimilation of long-term real data from a wetland, we significantly enhanced CH4 emission predictions. This advancement helps us better understand wetland contributions to atmospheric CH4, which are crucial for addressing climate change. Our method offers a promising tool for refining global climate models and guiding conservation efforts
Thi Lan Anh Dinh, Daniel Goll, Philippe Ciais, and Ronny Lauerwald
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-42, https://doi.org/10.5194/gmd-2024-42, 2024
Revised manuscript accepted for GMD
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The study assesses the performance of the dynamic global vegetation model (DGVM), ORCHIDEE, in capturing the impact of land-use change on carbon stocks across Europe. Comparisons with observations reveal that the model accurately represents carbon fluxes and stocks. Despite the underestimations in certain land-use conversions, the model describes general trends in soil carbon response to land-use change, aligning with the site observations.
Guohua Liu, Mirco Migliavacca, Christian Reimers, Basil Kraft, Markus Reichstein, Andrew Richardson, Lisa Wingate, Nicolas Delpierre, Hui Yang, and Alexander Winkler
EGUsphere, https://doi.org/10.5194/egusphere-2024-464, https://doi.org/10.5194/egusphere-2024-464, 2024
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Our study employs Long Short-Term Memory (LSTM) networks to model canopy greenness and phenology, integrating meteorological memory effects. LSTM model outperforms traditional methods, enhancing accuracy in predicting greenness dynamics and phenological transitions across plant functional types. Highlighting the importance of multi-variate meteorological memory effects, our research pioneers unlocking the secrets of vegetation phenology responses to climate change with deep learning techniques.
Benjamin Post, Esteban Acevedo-Trejos, Andrew D. Barton, and Agostino Merico
Geosci. Model Dev., 17, 1175–1195, https://doi.org/10.5194/gmd-17-1175-2024, https://doi.org/10.5194/gmd-17-1175-2024, 2024
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Creating computational models of how phytoplankton grows in the ocean is a technical challenge. We developed a new tool set (Xarray-simlab-ODE) for building such models using the programming language Python. We demonstrate the tool set in a library of plankton models (Phydra). Our goal was to allow scientists to develop models quickly, while also allowing the model structures to be changed easily. This allows us to test many different structures of our models to find the most appropriate one.
Nina Raoult, Simon Beylat, James M. Salter, Frédéric Hourdin, Vladislav Bastrikov, Catherine Ottlé, and Philippe Peylin
EGUsphere, https://doi.org/10.5194/egusphere-2023-2996, https://doi.org/10.5194/egusphere-2023-2996, 2024
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We use computer models to predict how the land surface will respond to climate change. However, these complex models do not always simulate what we observe in real life, limiting their effectiveness. To improve their accuracy, we use sophisticated statistical and computational techniques. Here we test a technique called “History matching” against more common approaches. This method adapts well to these models, helping better understand how they work and therefore how to make them more realistic.
Taeken Wijmer, Ahmad Al Bitar, Ludovic Arnaud, Remy Fieuzal, and Eric Ceschia
Geosci. Model Dev., 17, 997–1021, https://doi.org/10.5194/gmd-17-997-2024, https://doi.org/10.5194/gmd-17-997-2024, 2024
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Quantification of carbon fluxes of crops is an essential building block for the construction of a monitoring, reporting, and verification approach. We developed an end-to-end platform (AgriCarbon-EO) that assimilates, through a Bayesian approach, high-resolution (10 m) optical remote sensing data into radiative transfer and crop modelling at regional scale (100 x 100 km). Large-scale estimates of carbon flux are validated against in situ flux towers and yield maps and analysed at regional scale.
Moritz Laub, Sergey Blagodatsky, Marijn Van de Broek, Samuel Schlichenmaier, Benjapon Kunlanit, Johan Six, Patma Vityakon, and Georg Cadisch
Geosci. Model Dev., 17, 931–956, https://doi.org/10.5194/gmd-17-931-2024, https://doi.org/10.5194/gmd-17-931-2024, 2024
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To manage soil organic matter (SOM) sustainably, we need a better understanding of the role that soil microbes play in aggregate protection. Here, we propose the SAMM model, which connects soil aggregate formation to microbial growth. We tested it against data from a tropical long-term experiment and show that SAMM effectively represents the microbial growth, SOM, and aggregate dynamics and that it can be used to explore the importance of aggregate formation in SOM stabilization.
Jianhong Lin, Daniel Berveiller, Christophe François, Heikki Hänninen, Alexandre Morfin, Gaëlle Vincent, Rui Zhang, Cyrille Rathgeber, and Nicolas Delpierre
Geosci. Model Dev., 17, 865–879, https://doi.org/10.5194/gmd-17-865-2024, https://doi.org/10.5194/gmd-17-865-2024, 2024
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Currently, the high variability of budburst between individual trees is overlooked. The consequences of this neglect when projecting the dynamics and functioning of tree communities are unknown. Here we develop the first process-oriented model to describe the difference in budburst dates between individual trees in plant populations. Beyond budburst, the model framework provides a basis for studying the dynamics of phenological traits under climate change, from the individual to the community.
Skyler Kern, Mary E. McGuinn, Katherine M. Smith, Nadia Pinardi, Kyle E. Niemeyer, Nicole S. Lovenduski, and Peter E. Hamlington
Geosci. Model Dev., 17, 621–649, https://doi.org/10.5194/gmd-17-621-2024, https://doi.org/10.5194/gmd-17-621-2024, 2024
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Computational models are used to simulate the behavior of marine ecosystems. The models often have unknown parameters that need to be calibrated to accurately represent observational data. Here, we propose a novel approach to simultaneously determine a large set of parameters for a one-dimensional model of a marine ecosystem in the surface ocean at two contrasting sites. By utilizing global and local optimization techniques, we estimate many parameters in a computationally efficient manner.
Alexander S. Brunmayr, Frank Hagedorn, Margaux Moreno Duborgel, Luisa I. Minich, and Heather D. Graven
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-242, https://doi.org/10.5194/gmd-2023-242, 2024
Revised manuscript accepted for GMD
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A new generation of soil models promises to more accurately predict the carbon cycle in soils under climate change. However, measurements of 14C (the radioactive carbon isotope) in soils reveal that the new soil models face similar problems as the traditional models: they underestimate the residence time of carbon in soils and may therefore overestimate the net uptake of CO2 by the land ecosystem. Proposed solutions include restructuring the models and calibrating model parameters with 14C data.
Shuaitao Wang, Vincent Thieu, Gilles Billen, Josette Garnier, Marie Silvestre, Audrey Marescaux, Xingcheng Yan, and Nicolas Flipo
Geosci. Model Dev., 17, 449–476, https://doi.org/10.5194/gmd-17-449-2024, https://doi.org/10.5194/gmd-17-449-2024, 2024
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This paper presents unified RIVE v1.0, a unified version of the freshwater biogeochemistry model RIVE. It harmonizes different RIVE implementations, providing the referenced formalisms for microorganism activities to describe full biogeochemical cycles in the water column (e.g., carbon, nutrients, oxygen). Implemented as open-source projects in Python 3 (pyRIVE 1.0) and ANSI C (C-RIVE 0.32), unified RIVE v1.0 promotes and enhances collaboration among research teams and public services.
Sam S. Rabin, William J. Sacks, Danica L. Lombardozzi, Lili Xia, and Alan Robock
Geosci. Model Dev., 16, 7253–7273, https://doi.org/10.5194/gmd-16-7253-2023, https://doi.org/10.5194/gmd-16-7253-2023, 2023
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Climate models can help us simulate how the agricultural system will be affected by and respond to environmental change, but to be trustworthy they must realistically reproduce historical patterns. When farmers plant their crops and what varieties they choose will be important aspects of future adaptation. Here, we improve the crop component of a global model to better simulate observed growing seasons and examine the impacts on simulated crop yields and irrigation demand.
Weihang Liu, Tao Ye, Christoph Müller, Jonas Jägermeyr, James A. Franke, Haynes Stephens, and Shuo Chen
Geosci. Model Dev., 16, 7203–7221, https://doi.org/10.5194/gmd-16-7203-2023, https://doi.org/10.5194/gmd-16-7203-2023, 2023
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We develop a machine-learning-based crop model emulator with the inputs and outputs of multiple global gridded crop model ensemble simulations to capture the year-to-year variation of crop yield under future climate change. The emulator can reproduce the year-to-year variation of simulated yield given by the crop models under CO2, temperature, water, and nitrogen perturbations. Developing this emulator can provide a tool to project future climate change impact in a simple way.
Jurjen Rooze, Heewon Jung, and Hagen Radtke
Geosci. Model Dev., 16, 7107–7121, https://doi.org/10.5194/gmd-16-7107-2023, https://doi.org/10.5194/gmd-16-7107-2023, 2023
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Chemical particles in nature have properties such as age or reactivity. Distributions can describe the properties of chemical concentrations. In nature, they are affected by mixing processes, such as chemical diffusion, burrowing animals, and bottom trawling. We derive equations for simulating the effect of mixing on central moments that describe the distributions. We then demonstrate applications in which these equations are used to model continua in disturbed natural environments.
Esteban Acevedo-Trejos, Jean Braun, Katherine Kravitz, N. Alexia Raharinirina, and Benoît Bovy
Geosci. Model Dev., 16, 6921–6941, https://doi.org/10.5194/gmd-16-6921-2023, https://doi.org/10.5194/gmd-16-6921-2023, 2023
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The interplay of tectonics and climate influences the evolution of life and the patterns of biodiversity we observe on earth's surface. Here we present an adaptive speciation component coupled with a landscape evolution model that captures the essential earth-surface, ecological, and evolutionary processes that lead to the diversification of taxa. We can illustrate with our tool how life and landforms co-evolve to produce distinct biodiversity patterns on geological timescales.
Veli Çağlar Yumruktepe, Erik Askov Mousing, Jerry Tjiputra, and Annette Samuelsen
Geosci. Model Dev., 16, 6875–6897, https://doi.org/10.5194/gmd-16-6875-2023, https://doi.org/10.5194/gmd-16-6875-2023, 2023
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We present an along BGC-Argo track 1D modelling framework. The model physics is constrained by the BGC-Argo temperature and salinity profiles to reduce the uncertainties related to mixed layer dynamics, allowing the evaluation of the biogeochemical formulation and parameterization. We objectively analyse the model with BGC-Argo and satellite data and improve the model biogeochemical dynamics. We present the framework, example cases and routines for model improvement and implementations.
Tanya J. R. Lippmann, Ype van der Velde, Monique M. P. D. Heijmans, Han Dolman, Dimmie M. D. Hendriks, and Ko van Huissteden
Geosci. Model Dev., 16, 6773–6804, https://doi.org/10.5194/gmd-16-6773-2023, https://doi.org/10.5194/gmd-16-6773-2023, 2023
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Vegetation is a critical component of carbon storage in peatlands but an often-overlooked concept in many peatland models. We developed a new model capable of simulating the response of vegetation to changing environments and management regimes. We evaluated the model against observed chamber data collected at two peatland sites. We found that daily air temperature, water level, harvest frequency and height, and vegetation composition drive methane and carbon dioxide emissions.
Chonggang Xu, Bradley Christoffersen, Zachary Robbins, Ryan Knox, Rosie A. Fisher, Rutuja Chitra-Tarak, Martijn Slot, Kurt Solander, Lara Kueppers, Charles Koven, and Nate McDowell
Geosci. Model Dev., 16, 6267–6283, https://doi.org/10.5194/gmd-16-6267-2023, https://doi.org/10.5194/gmd-16-6267-2023, 2023
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We introduce a plant hydrodynamic model for the U.S. Department of Energy (DOE)-sponsored model, the Functionally Assembled Terrestrial Ecosystem Simulator (FATES). To better understand this new model system and its functionality in tropical forest ecosystems, we conducted a global parameter sensitivity analysis at Barro Colorado Island, Panama. We identified the key parameters that affect the simulated plant hydrodynamics to guide both modeling and field campaign studies.
Jianghui Du
Geosci. Model Dev., 16, 5865–5894, https://doi.org/10.5194/gmd-16-5865-2023, https://doi.org/10.5194/gmd-16-5865-2023, 2023
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Trace elements and isotopes (TEIs) are important tools to study the changes in the ocean environment both today and in the past. However, the behaviors of TEIs in marine sediments are poorly known, limiting our ability to use them in oceanography. Here we present a modeling framework that can be used to generate and run models of the sedimentary cycling of TEIs assisted with advanced numerical tools in the Julia language, lowering the coding barrier for the general user to study marine TEIs.
Siyu Zhu, Peipei Wu, Siyi Zhang, Oliver Jahn, Shu Li, and Yanxu Zhang
Geosci. Model Dev., 16, 5915–5929, https://doi.org/10.5194/gmd-16-5915-2023, https://doi.org/10.5194/gmd-16-5915-2023, 2023
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In this study, we estimate the global biogeochemical cycling of Hg in a state-of-the-art physical-ecosystem ocean model (high-resolution-MITgcm/Hg), providing a more accurate portrayal of surface Hg concentrations in estuarine and coastal areas, strong western boundary flow and upwelling areas, and concentration diffusion as vortex shapes. The high-resolution model can help us better predict the transport and fate of Hg in the ocean and its impact on the global Hg cycle.
Maria Val Martin, Elena Blanc-Betes, Ka Ming Fung, Euripides P. Kantzas, Ilsa B. Kantola, Isabella Chiaravalloti, Lyla L. Taylor, Louisa K. Emmons, William R. Wieder, Noah J. Planavsky, Michael D. Masters, Evan H. DeLucia, Amos P. K. Tai, and David J. Beerling
Geosci. Model Dev., 16, 5783–5801, https://doi.org/10.5194/gmd-16-5783-2023, https://doi.org/10.5194/gmd-16-5783-2023, 2023
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Enhanced rock weathering (ERW) is a CO2 removal strategy that involves applying crushed rocks (e.g., basalt) to agricultural soils. However, unintended processes within the N cycle due to soil pH changes may affect the climate benefits of C sequestration. ERW could drive changes in soil emissions of non-CO2 GHGs (N2O) and trace gases (NO and NH3) that may affect air quality. We present a new improved N cycling scheme for the land model (CLM5) to evaluate ERW effects on soil gas N emissions.
Huajie Zhu, Mousong Wu, Fei Jiang, Michael Vossbeck, Thomas Kaminski, Xiuli Xing, Jun Wang, Weimin Ju, and Jing M. Chen
EGUsphere, https://doi.org/10.5194/egusphere-2023-1955, https://doi.org/10.5194/egusphere-2023-1955, 2023
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In this work, Nanjing University Carbon Assimilation System (NUCAS) was developed. Data assimilation experiments were conducted to demonstrate the robustness and to investigate the feasibility and applicability of NUCAS. The assimilation of COS significantly improved the model performance in gross primary productivity, sensible heat, latent heat and even soil moisture, demonstrating that COS can provide strong constraints on parameters relevant to water, energy and carbon processes.
Özgür Gürses, Laurent Oziel, Onur Karakuş, Dmitry Sidorenko, Christoph Völker, Ying Ye, Moritz Zeising, Martin Butzin, and Judith Hauck
Geosci. Model Dev., 16, 4883–4936, https://doi.org/10.5194/gmd-16-4883-2023, https://doi.org/10.5194/gmd-16-4883-2023, 2023
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This paper assesses the biogeochemical model REcoM3 coupled to the ocean–sea ice model FESOM2.1. The model can be used to simulate the carbon uptake or release of the ocean on timescales of several hundred years. A detailed analysis of the nutrients, ocean productivity, and ecosystem is followed by the carbon cycle. The main conclusion is that the model performs well when simulating the observed mean biogeochemical state and variability and is comparable to other ocean–biogeochemical models.
Hocheol Seo and Yeonjoo Kim
Geosci. Model Dev., 16, 4699–4713, https://doi.org/10.5194/gmd-16-4699-2023, https://doi.org/10.5194/gmd-16-4699-2023, 2023
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Wildfire is a crucial factor in carbon and water fluxes on the Earth system. About 2.1 Pg of carbon is released into the atmosphere by wildfires annually. Because the fire processes are still limitedly represented in land surface models, we forced the daily GFED4 burned area into the land surface model over Alaska and Siberia. The results with the GFED4 burned area significantly improved the simulated carbon emissions and net ecosystem exchange compared to the default simulation.
Hideki Ninomiya, Tomomichi Kato, Lea Végh, and Lan Wu
Geosci. Model Dev., 16, 4155–4170, https://doi.org/10.5194/gmd-16-4155-2023, https://doi.org/10.5194/gmd-16-4155-2023, 2023
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Non-structural carbohydrates (NSCs) play a crucial role in plants to counteract the effects of climate change. We added a new NSC module into the SEIB-DGVM, an individual-based ecosystem model. The simulated NSC levels and their seasonal patterns show a strong agreement with observed NSC data at both point and global scales. The model can be used to simulate the biotic effects resulting from insufficient NSCs, which are otherwise difficult to measure in terrestrial ecosystems globally.
Nathaelle Bouttes, Lester Kwiatkowski, Manon Berger, Victor Brovkin, and Guy Munhoven
EGUsphere, https://doi.org/10.5194/egusphere-2023-1162, https://doi.org/10.5194/egusphere-2023-1162, 2023
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Coral reefs are crucial for biodiversity, but they also play a role in the carbon cycle on long time scales of a few thousand years. To better simulate the future and past evolution of coral reefs and their effect on the global carbon cycle, hence on atmospheric CO2 concentration, it is necessary to include coral reefs within a climate model. Here we describe the inclusion of coral reef carbonate production in a carbon-climate model and its validation in comparison to existing modern data.
Miquel De Cáceres, Roberto Molowny-Horas, Antoine Cabon, Jordi Martínez-Vilalta, Maurizio Mencuccini, Raúl García-Valdés, Daniel Nadal-Sala, Santiago Sabaté, Nicolas Martin-StPaul, Xavier Morin, Francesco D'Adamo, Enric Batllori, and Aitor Améztegui
Geosci. Model Dev., 16, 3165–3201, https://doi.org/10.5194/gmd-16-3165-2023, https://doi.org/10.5194/gmd-16-3165-2023, 2023
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Regional-level applications of dynamic vegetation models are challenging because they need to accommodate the variation in plant functional diversity. This can be done by estimating parameters from available plant trait databases while adopting alternative solutions for missing data. Here we present the design, parameterization and evaluation of MEDFATE (version 2.9.3), a novel model of forest dynamics for its application over a region in the western Mediterranean Basin.
Jens Heinke, Susanne Rolinski, and Christoph Müller
Geosci. Model Dev., 16, 2455–2475, https://doi.org/10.5194/gmd-16-2455-2023, https://doi.org/10.5194/gmd-16-2455-2023, 2023
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We develop a livestock module for the global vegetation model LPJmL5.0 to simulate the impact of grazing dairy cattle on carbon and nitrogen cycles in grasslands. A novelty of the approach is that it accounts for the effect of feed quality on feed uptake and feed utilization by animals. The portioning of dietary nitrogen into milk, feces, and urine shows very good agreement with estimates obtained from animal trials.
Yimian Ma, Xu Yue, Stephen Sitch, Nadine Unger, Johan Uddling, Lina M. Mercado, Cheng Gong, Zhaozhong Feng, Huiyi Yang, Hao Zhou, Chenguang Tian, Yang Cao, Yadong Lei, Alexander W. Cheesman, Yansen Xu, and Maria Carolina Duran Rojas
Geosci. Model Dev., 16, 2261–2276, https://doi.org/10.5194/gmd-16-2261-2023, https://doi.org/10.5194/gmd-16-2261-2023, 2023
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Plants have been found to respond differently to O3, but the variations in the sensitivities have rarely been explained nor fully implemented in large-scale assessment. This study proposes a new O3 damage scheme with leaf mass per area to unify varied sensitivities for all plant species. Our assessment reveals an O3-induced reduction of 4.8 % in global GPP, with the highest reduction of >10 % for cropland, suggesting an emerging risk of crop yield loss under the threat of O3 pollution.
Winslow D. Hansen, Adrianna Foster, Benjamin Gaglioti, Rupert Seidl, and Werner Rammer
Geosci. Model Dev., 16, 2011–2036, https://doi.org/10.5194/gmd-16-2011-2023, https://doi.org/10.5194/gmd-16-2011-2023, 2023
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Permafrost and the thick soil-surface organic layers that insulate permafrost are important controls of boreal forest dynamics and carbon cycling. However, both are rarely included in process-based vegetation models used to simulate future ecosystem trajectories. To address this challenge, we developed a computationally efficient permafrost and soil organic layer module that operates at fine spatial (1 ha) and temporal (daily) resolutions.
Heewon Jung, Hyun-Seob Song, and Christof Meile
Geosci. Model Dev., 16, 1683–1696, https://doi.org/10.5194/gmd-16-1683-2023, https://doi.org/10.5194/gmd-16-1683-2023, 2023
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Microbial activity responsible for many chemical transformations depends on environmental conditions. These can vary locally, e.g., between poorly connected pores in porous media. We present a modeling framework that resolves such small spatial scales explicitly, accounts for feedback between transport and biogeochemical conditions, and can integrate state-of-the-art representations of microbes in a computationally efficient way, making it broadly applicable in science and engineering use cases.
Arthur Guignabert, Quentin Ponette, Frédéric André, Christian Messier, Philippe Nolet, and Mathieu Jonard
Geosci. Model Dev., 16, 1661–1682, https://doi.org/10.5194/gmd-16-1661-2023, https://doi.org/10.5194/gmd-16-1661-2023, 2023
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Spatially explicit and process-based models are useful to test innovative forestry practices under changing and uncertain conditions. However, their larger use is often limited by the restricted range of species and stand structures they can reliably account for. We therefore calibrated and evaluated such a model, HETEROFOR, for 23 species across southern Québec. Our results showed that the model is robust and can predict accurately both individual tree growth and stand dynamics in this region.
Maureen Beaudor, Nicolas Vuichard, Juliette Lathière, Nikolaos Evangeliou, Martin Van Damme, Lieven Clarisse, and Didier Hauglustaine
Geosci. Model Dev., 16, 1053–1081, https://doi.org/10.5194/gmd-16-1053-2023, https://doi.org/10.5194/gmd-16-1053-2023, 2023
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Ammonia mainly comes from the agricultural sector, and its volatilization relies on environmental variables. Our approach aims at benefiting from an Earth system model framework to estimate it. By doing so, we represent a consistent spatial distribution of the emissions' response to environmental changes.
We greatly improved the seasonal cycle of emissions compared with previous work. In addition, our model includes natural soil emissions (that are rarely represented in modeling approaches).
Rui Ying, Fanny M. Monteiro, Jamie D. Wilson, and Daniela N. Schmidt
Geosci. Model Dev., 16, 813–832, https://doi.org/10.5194/gmd-16-813-2023, https://doi.org/10.5194/gmd-16-813-2023, 2023
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Planktic foraminifera are marine-calcifying zooplankton; their shells are widely used to measure past temperature and productivity. We developed ForamEcoGEnIE 2.0 to simulate the four subgroups of this organism. We found that the relative abundance distribution agrees with marine sediment core-top data and that carbon export and biomass are close to sediment trap and plankton net observations respectively. This model provides the opportunity to study foraminiferal ecology in any geological era.
Onur Kerimoglu, Markus Pahlow, Prima Anugerahanti, and Sherwood Lan Smith
Geosci. Model Dev., 16, 95–108, https://doi.org/10.5194/gmd-16-95-2023, https://doi.org/10.5194/gmd-16-95-2023, 2023
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In classical models that track the changes in the elemental composition of phytoplankton, additional state variables are required for each element resolved. In this study, we show how the behavior of such an explicit model can be approximated using an
instantaneous acclimationapproach, in which the elemental composition of the phytoplankton is assumed to adjust to an optimal value instantaneously. Through rigorous tests, we evaluate the consistency of this scheme.
Yuan Zhang, Devaraju Narayanappa, Philippe Ciais, Wei Li, Daniel Goll, Nicolas Vuichard, Martin G. De Kauwe, Laurent Li, and Fabienne Maignan
Geosci. Model Dev., 15, 9111–9125, https://doi.org/10.5194/gmd-15-9111-2022, https://doi.org/10.5194/gmd-15-9111-2022, 2022
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There are a few studies to examine if current models correctly represented the complex processes of transpiration. Here, we use a coefficient Ω, which indicates if transpiration is mainly controlled by vegetation processes or by turbulence, to evaluate the ORCHIDEE model. We found a good performance of ORCHIDEE, but due to compensation of biases in different processes, we also identified how different factors control Ω and where the model is wrong. Our method is generic to evaluate other models.
Cited articles
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