Articles | Volume 7, issue 4
https://doi.org/10.5194/gmd-7-1271-2014
© Author(s) 2014. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/gmd-7-1271-2014
© Author(s) 2014. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Model description paper
| 
04 Jul 2014
Model description paper |
| 04 Jul 2014
C-GEM (v 1.0): a new, cost-efficient biogeochemical model for estuaries and its application to a funnel-shaped system
C. Volta
Department of Earth and Environmental Sciences, Université Libre de Bruxelles, Brussels, Belgium
School of Geographical Sciences, University of Bristol, Bristol, UK
H. H. G. Savenije
Water Resources Section, Department of Water Management, Delft University of Technology, Delft, the Netherlands
G. G. Laruelle
Department of Earth and Environmental Sciences, Université Libre de Bruxelles, Brussels, Belgium
P. Regnier
Department of Earth and Environmental Sciences, Université Libre de Bruxelles, Brussels, Belgium
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Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2020-82, https://doi.org/10.5194/hess-2020-82, 2020
Manuscript not accepted for further review
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Revised manuscript not accepted
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Tide–river dynamics play an essential role in large-scale river deltas as they exert a tremendous impact on delta morphodynamics, salt intrusion and deltaic ecosystems. For the first time, we illustrate that there is a critical river discharge, beyond which tidal damping is reduced with increasing river discharge, and we explore the underlying mechanism using an analytical model. The results are useful for guiding sustainable water management and sediment transport in tidal rivers.
Erwin Zehe, Ralf Loritz, Conrad Jackisch, Martijn Westhoff, Axel Kleidon, Theresa Blume, Sibylle K. Hassler, and Hubert H. Savenije
Hydrol. Earth Syst. Sci., 23, 971–987, https://doi.org/10.5194/hess-23-971-2019, https://doi.org/10.5194/hess-23-971-2019, 2019
Martijn Westhoff, Axel Kleidon, Stan Schymanski, Benjamin Dewals, Femke Nijsse, Maik Renner, Henk Dijkstra, Hisashi Ozawa, Hubert Savenije, Han Dolman, Antoon Meesters, and Erwin Zehe
Earth Syst. Dynam. Discuss., https://doi.org/10.5194/esd-2019-6, https://doi.org/10.5194/esd-2019-6, 2019
Publication in ESD not foreseen
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Even models relying on physical laws have parameters that need to be measured or estimated. Thermodynamic optimality principles potentially offer a way to reduce the number of estimated parameters by stating that a system evolves to an optimum state. These principles have been applied successfully within the Earth system, but it is often unclear what to optimize and how. In this review paper we identify commonalities between different successful applications as well as some doubtful applications.
Hongkai Gao, Christian Birkel, Markus Hrachowitz, Doerthe Tetzlaff, Chris Soulsby, and Hubert H. G. Savenije
Hydrol. Earth Syst. Sci., 23, 787–809, https://doi.org/10.5194/hess-23-787-2019, https://doi.org/10.5194/hess-23-787-2019, 2019
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Supported by large-sample ecological observations, a novel, simple and topography-driven runoff generation module (HSC-MCT) was created. The HSC-MCT is calibration-free, and therefore it can be used to predict in ungauged basins, and has great potential to be generalized at the global scale. Also, it allows us to reproduce the variation of saturation areas, which has great potential to be used for broader hydrological, ecological, climatological, and biogeochemical studies.
Nevil Quinn, Günter Blöschl, András Bárdossy, Attilio Castellarin, Martyn Clark, Christophe Cudennec, Demetris Koutsoyiannis, Upmanu Lall, Lubomir Lichner, Juraj Parajka, Christa D. Peters-Lidard, Graham Sander, Hubert Savenije, Keith Smettem, Harry Vereecken, Alberto Viglione, Patrick Willems, Andy Wood, Ross Woods, Chong-Yu Xu, and Erwin Zehe
Proc. IAHS, 380, 3–8, https://doi.org/10.5194/piahs-380-3-2018, https://doi.org/10.5194/piahs-380-3-2018, 2018
Laurène Bouaziz, Albrecht Weerts, Jaap Schellekens, Eric Sprokkereef, Jasper Stam, Hubert Savenije, and Markus Hrachowitz
Hydrol. Earth Syst. Sci., 22, 6415–6434, https://doi.org/10.5194/hess-22-6415-2018, https://doi.org/10.5194/hess-22-6415-2018, 2018
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We quantify net intercatchment groundwater flows in the Meuse basin in a complementary three-step approach through (1) water budget accounting, (2) testing a set of conceptual hydrological models and (3) evaluating against remote sensing actual evaporation data. We show that net intercatchment groundwater flows can make up as much as 25 % of mean annual precipitation in the headwaters and should therefore be accounted for in conceptual models to prevent overestimating actual evaporation rates.
Dirk-Jan D. Kok, Saket Pande, Jules B. van Lier, Angela R. C. Ortigara, Hubert Savenije, and Stefan Uhlenbrook
Hydrol. Earth Syst. Sci., 22, 5781–5799, https://doi.org/10.5194/hess-22-5781-2018, https://doi.org/10.5194/hess-22-5781-2018, 2018
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Phosphorus (P) is important to global food security. Thus it is concerning that natural P reserves are predicted to deplete within the century. Here we explore the potential of P recovery from wastewater (WW) at global scale. We identify high production and demand sites to determine optimal market prices and trade flows. We show that 20 % of the agricultural demand can be met, yet only 4 % can be met economically. Nonetheless, this recovery stimulates circular economic development in WW treatment.
Nevil Quinn, Günter Blöschl, András Bárdossy, Attilio Castellarin, Martyn Clark, Christophe Cudennec, Demetris Koutsoyiannis, Upmanu Lall, Lubomir Lichner, Juraj Parajka, Christa D. Peters-Lidard, Graham Sander, Hubert Savenije, Keith Smettem, Harry Vereecken, Alberto Viglione, Patrick Willems, Andy Wood, Ross Woods, Chong-Yu Xu, and Erwin Zehe
Hydrol. Earth Syst. Sci., 22, 5735–5739, https://doi.org/10.5194/hess-22-5735-2018, https://doi.org/10.5194/hess-22-5735-2018, 2018
César~Dionisio Jiménez-Rodríguez, Miriam Coenders-Gerrits, Thom Bogaard, Erika Vatiero, and Hubert Savenije
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2018-538, https://doi.org/10.5194/hess-2018-538, 2018
Manuscript not accepted for further review
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The measurement of stable isotopes in water vapor has been improved with the use of laser technologies. Its direct application in the field depends on the availability of infrastructure or the budget of the project. For those cases when it is not possible, we provide an alternative method to sample the air for its later measurement. This method is based on the use of a low-cost polyethylene bag, getting stable measurements with a volume of 450 mL of air reducing the risk of sample deterioration.
Petra Hulsman, Thom A. Bogaard, and Hubert H. G. Savenije
Hydrol. Earth Syst. Sci., 22, 5081–5095, https://doi.org/10.5194/hess-22-5081-2018, https://doi.org/10.5194/hess-22-5081-2018, 2018
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In many river basins, the development of hydrological models is challenged by poor discharge data availability and quality. In contrast, water level data are more reliable, as these are direct measurements and are unprocessed. In this study, an alternative calibration method is presented using water-level time series and the Strickler–Manning formula instead of discharge. This is applied to a semi-distributed rainfall-runoff model for the semi-arid, poorly gauged Mara River basin in Kenya.
Lan Wang-Erlandsson, Ingo Fetzer, Patrick W. Keys, Ruud J. van der Ent, Hubert H. G. Savenije, and Line J. Gordon
Hydrol. Earth Syst. Sci., 22, 4311–4328, https://doi.org/10.5194/hess-22-4311-2018, https://doi.org/10.5194/hess-22-4311-2018, 2018
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Winds carry air moisture from one place to another. Thus, land-use change that alters air moisture content can also modify downwind rainfall and distant river flows. This aspect has rarely been taken into account in studies of river flow changes. We show here that remote land-use change effect on rainfall can exceed that of local, and that foreign nation influence on river flows is much more prevalent than previously thought. This has important implications for both land and water governance.
Huayang Cai, Marco Toffolon, Hubert H. G. Savenije, Qingshu Yang, and Erwan Garel
Ocean Sci., 14, 769–782, https://doi.org/10.5194/os-14-769-2018, https://doi.org/10.5194/os-14-769-2018, 2018
Stefanie R. Lutz, Andrea Popp, Tim van Emmerik, Tom Gleeson, Liz Kalaugher, Karsten Möbius, Tonie Mudde, Brett Walton, Rolf Hut, Hubert Savenije, Louise J. Slater, Anna Solcerova, Cathelijne R. Stoof, and Matthias Zink
Hydrol. Earth Syst. Sci., 22, 3589–3599, https://doi.org/10.5194/hess-22-3589-2018, https://doi.org/10.5194/hess-22-3589-2018, 2018
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Media play a key role in the communication between scientists and the general public. However, the interaction between scientists and journalists is not always straightforward. In this opinion paper, we present insights from hydrologists and journalists into the benefits, aftermath and potential pitfalls of science–media interaction. We aim to encourage scientists to participate in the diverse and evolving media landscape, and we call on the scientific community to support scientists who do so.
Fabiola Murguia-Flores, Sandra Arndt, Anita L. Ganesan, Guillermo Murray-Tortarolo, and Edward R. C. Hornibrook
Geosci. Model Dev., 11, 2009–2032, https://doi.org/10.5194/gmd-11-2009-2018, https://doi.org/10.5194/gmd-11-2009-2018, 2018
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Soil bacteria known as methanotrophs are the only biological sink for atmospheric methane (CH4). Their activity depends on climatic and edaphic conditions, thus varies spatially and temporarily. Based on this, we developed a model (MeMo v1.0) to assess the global CH4 consumption by soils. The global CH4 uptake was 33.5 Tg CH4 yr-1 for 1990–2009, with an increasing trend of 0.1 Tg CH4 yr-2. The regional analysis proved that warm and semiarid regions represent the most efficient CH4 sink.
Alizée Roobaert, Goulven G. Laruelle, Peter Landschützer, and Pierre Regnier
Biogeosciences, 15, 1701–1720, https://doi.org/10.5194/bg-15-1701-2018, https://doi.org/10.5194/bg-15-1701-2018, 2018
Hubert H. G. Savenije
Hydrol. Earth Syst. Sci., 22, 1911–1916, https://doi.org/10.5194/hess-22-1911-2018, https://doi.org/10.5194/hess-22-1911-2018, 2018
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This paper provides the connection between two simple equations describing groundwater flow at different scales: the Darcy equation describes groundwater flow at pore scale, the linear reservoir equation at catchment scale. The connection between the two appears to be very simple. The two parameters of the equations are proportional, depending on the porosity of the subsoil and the resistance for the groundwater to enter the surface drainage network.
Zhilin Zhang and Hubert H. G. Savenije
Earth Syst. Dynam., 9, 241–247, https://doi.org/10.5194/esd-9-241-2018, https://doi.org/10.5194/esd-9-241-2018, 2018
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This paper presents a new equation for the dispersion of salinity in alluvial estuaries based on the maximum power concept. The new equation is physically based and replaces previous empirical equations. It is very useful for application in practice because in contrast to previous methods it no longer requires a calibration parameter, turning the method into a predictive method. The paper presents successful applications in more than 23 estuaries in different parts of the world.
Dirk-Jan Daniel Kok, Saket Pande, Angela Renata Cordeiro Ortigara, Hubert Savenije, and Stefan Uhlenbrook
Proc. IAHS, 376, 83–86, https://doi.org/10.5194/piahs-376-83-2018, https://doi.org/10.5194/piahs-376-83-2018, 2018
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Phosphorus is necessary for the development of crops and is therefore essential in safeguarding our food security. Several studies predict that our rock phosphate reserves, used to create synthetic, phosphatic fertilizers, may become depleted within this century. This study roughly approximates for which areas in Africa we can instead recover phosphorus from wastewater in order to reduce our dependancy on unsustainable rock phosphate.
Bart Schilperoort, Miriam Coenders-Gerrits, Willem Luxemburg, César Jiménez Rodríguez, César Cisneros Vaca, and Hubert Savenije
Hydrol. Earth Syst. Sci., 22, 819–830, https://doi.org/10.5194/hess-22-819-2018, https://doi.org/10.5194/hess-22-819-2018, 2018
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Using the
DTStechnology, we measured the evaporation of a forest using fibre optic cables. The cables work like long thermometers, with a measurement every 12.5 cm. We placed the cables vertically along the tower, one cable being dry, the other kept wet. By looking at the dry and wet cable temperatures over the height we are able to study heat storage and the amount of water the forest is evaporating. These results can be used to better understand the storage and heat exchange of forests.
Axel Kleidon and Hubert H. G. Savenije
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2017-674, https://doi.org/10.5194/hess-2017-674, 2017
Revised manuscript not accepted
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At larger scales, the flow of rivers can often be described by a relatively simple, exponential decay, and it is unclear how such simple behaviour can be explained given that river basins show such vast complexity. Here, we use a highly idealised model to show that such simple behaviour can be explained by viewing it as the emergent consequence of the groundwater system (which feeds river flow) minimising its energy dissipation.
Goulven G. Laruelle, Peter Landschützer, Nicolas Gruber, Jean-Louis Tison, Bruno Delille, and Pierre Regnier
Biogeosciences, 14, 4545–4561, https://doi.org/10.5194/bg-14-4545-2017, https://doi.org/10.5194/bg-14-4545-2017, 2017
Jakob Zscheischler, Miguel D. Mahecha, Valerio Avitabile, Leonardo Calle, Nuno Carvalhais, Philippe Ciais, Fabian Gans, Nicolas Gruber, Jens Hartmann, Martin Herold, Kazuhito Ichii, Martin Jung, Peter Landschützer, Goulven G. Laruelle, Ronny Lauerwald, Dario Papale, Philippe Peylin, Benjamin Poulter, Deepak Ray, Pierre Regnier, Christian Rödenbeck, Rosa M. Roman-Cuesta, Christopher Schwalm, Gianluca Tramontana, Alexandra Tyukavina, Riccardo Valentini, Guido van der Werf, Tristram O. West, Julie E. Wolf, and Markus Reichstein
Biogeosciences, 14, 3685–3703, https://doi.org/10.5194/bg-14-3685-2017, https://doi.org/10.5194/bg-14-3685-2017, 2017
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Here we synthesize a wide range of global spatiotemporal observational data on carbon exchanges between the Earth surface and the atmosphere. A key challenge was to consistently combining observational products of terrestrial and aquatic surfaces. Our primary goal is to identify today’s key uncertainties and observational shortcomings that would need to be addressed in future measurement campaigns or expansions of in situ observatories.
Randal D. Koster, Alan K. Betts, Paul A. Dirmeyer, Marc Bierkens, Katrina E. Bennett, Stephen J. Déry, Jason P. Evans, Rong Fu, Felipe Hernandez, L. Ruby Leung, Xu Liang, Muhammad Masood, Hubert Savenije, Guiling Wang, and Xing Yuan
Hydrol. Earth Syst. Sci., 21, 3777–3798, https://doi.org/10.5194/hess-21-3777-2017, https://doi.org/10.5194/hess-21-3777-2017, 2017
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Large-scale hydrological variability can affect society in profound ways; floods and droughts, for example, often cause major damage and hardship. A recent gathering of hydrologists at a symposium to honor the career of Professor Eric Wood motivates the present survey of recent research on this variability. The surveyed literature and the illustrative examples provided in the paper show that research into hydrological variability continues to be strong, vibrant, and multifaceted.
Zhilin Zhang and Hubert H. G. Savenije
Hydrol. Earth Syst. Sci., 21, 3287–3305, https://doi.org/10.5194/hess-21-3287-2017, https://doi.org/10.5194/hess-21-3287-2017, 2017
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An estuary is where fresh water rivers meet the salty open sea. This mixture of salty fresh water leads to a varying water quality. There a model works well showing how far the salty water can travel, with an empirical parameter that needs to be calibrated every time. This paper provides a possible solution for this parameter to make the model predictive. Also, the model was improved by considering 2-D exchange flow. This new model was supported by observations in 18 estuaries around the world.
Goulven Gildas Laruelle, Nicolas Goossens, Sandra Arndt, Wei-Jun Cai, and Pierre Regnier
Biogeosciences, 14, 2441–2468, https://doi.org/10.5194/bg-14-2441-2017, https://doi.org/10.5194/bg-14-2441-2017, 2017
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The C-GEM generic reactive-transport model is applied to each tidal estuary of the US East Coast. Seasonal simulations are performed, which allows the understanding and quantification of the effect of the estuarine filter on the lateral fluxes of carbon coming from rivers.
Catchments as meta-organisms – a new blueprint for hydrological modelling
Hubert H. G. Savenije and Markus Hrachowitz
Hydrol. Earth Syst. Sci., 21, 1107–1116, https://doi.org/10.5194/hess-21-1107-2017, https://doi.org/10.5194/hess-21-1107-2017, 2017
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The natural environment that we live in is the result of evolution. This does not only apply to ecosystems, but also to the physical environment through which the water flows. This has resulted in the formation of flow patterns that obey sometimes surprisingly simple mathematical laws. Hydrological models should represent the physics of these patterns and should account for the fact that the ecosystem adjusts itself continuously to changing circumstances. Physics-based models are alive!
Tanja de Boer-Euser, Laurène Bouaziz, Jan De Niel, Claudia Brauer, Benjamin Dewals, Gilles Drogue, Fabrizio Fenicia, Benjamin Grelier, Jiri Nossent, Fernando Pereira, Hubert Savenije, Guillaume Thirel, and Patrick Willems
Hydrol. Earth Syst. Sci., 21, 423–440, https://doi.org/10.5194/hess-21-423-2017, https://doi.org/10.5194/hess-21-423-2017, 2017
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In this study, the rainfall–runoff models of eight international research groups were compared for a set of subcatchments of the Meuse basin to investigate the influence of certain model components on the modelled discharge. Although the models showed similar performances based on general metrics, clear differences could be observed for specific events. The differences during drier conditions could indeed be linked to differences in model structures.
Remko Nijzink, Christopher Hutton, Ilias Pechlivanidis, René Capell, Berit Arheimer, Jim Freer, Dawei Han, Thorsten Wagener, Kevin McGuire, Hubert Savenije, and Markus Hrachowitz
Hydrol. Earth Syst. Sci., 20, 4775–4799, https://doi.org/10.5194/hess-20-4775-2016, https://doi.org/10.5194/hess-20-4775-2016, 2016
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The core component of many hydrological systems, the moisture storage capacity available to vegetation, is typically treated as a calibration parameter in hydrological models and often considered to remain constant in time. In this paper we test the potential of a recently introduced method to robustly estimate catchment-scale root-zone storage capacities exclusively based on climate data to reproduce the temporal evolution of root-zone storage under change (deforestation).
James A. Bradley, Sandra Arndt, Marie Šabacká, Liane G. Benning, Gary L. Barker, Joshua J. Blacker, Marian L. Yallop, Katherine E. Wright, Christopher M. Bellas, Jonathan Telling, Martyn Tranter, and Alexandre M. Anesio
Biogeosciences, 13, 5677–5696, https://doi.org/10.5194/bg-13-5677-2016, https://doi.org/10.5194/bg-13-5677-2016, 2016
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Soil development following glacier retreat was characterized using a novel integrated field, laboratory and modelling approach in Svalbard. We found community shifts in bacteria, which were responsible for driving cycles in carbon and nutrients. Allochthonous inputs were also important in sustaining bacterial production. This study shows how an integrated model–data approach can improve understanding and obtain a more holistic picture of soil development in an increasingly ice-free future world.
Ali D. Abdullah, Jacqueline I. A. Gisen, Pieter van der Zaag, Hubert H. G. Savenije, Usama F. A. Karim, Ilyas Masih, and Ioana Popescu
Hydrol. Earth Syst. Sci., 20, 4031–4042, https://doi.org/10.5194/hess-20-4031-2016, https://doi.org/10.5194/hess-20-4031-2016, 2016
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A comprehensive and detailed data set of the salinity distribution over an entire year in a complex and dynamic (because heavily utilized and modified) deltaic river system was thoroughly analysed, and formed the basis for a validated analytical model that can predict the extent of seawater among other salinity sources in an estuary. The procedure can be applied to other estuaries.
Nutchanart Sriwongsitanon, Hongkai Gao, Hubert H. G. Savenije, Ekkarin Maekan, Sirikanya Saengsawang, and Sansarith Thianpopirug
Hydrol. Earth Syst. Sci., 20, 3361–3377, https://doi.org/10.5194/hess-20-3361-2016, https://doi.org/10.5194/hess-20-3361-2016, 2016
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We demonstrated that the readily available NDII remote sensing product is a very useful proxy for moisture storage in the root zone of vegetation. We compared the temporal variation of the NDII with the root zone storage in a hydrological model of eight catchments in the Upper Ping River in Thailand, yielding very good results. Having a reliable NDII product that can help us to estimate the actual moisture storage in catchments is a major contribution to prediction in ungauged basins.
Nadja I. den Besten, Saket Pande, and Hubert H. G. Savenije
Proc. IAHS, 373, 115–118, https://doi.org/10.5194/piahs-373-115-2016, https://doi.org/10.5194/piahs-373-115-2016, 2016
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Maharashtra is one of the states in India that has witnessed highest rates of farmer suicides as proportion of total number of suicides. We interpret the crisis using a socio-hydrological model in two adjoining regions in Maharashtra, Marathwada and Desh, with higher farmer suicide rates in the former. The analysis confirms existing narratives: low (soil) water storage capacities, no irrigation and access to alternative sources of incomes are to blame for the crisis.
Lan Wang-Erlandsson, Wim G. M. Bastiaanssen, Hongkai Gao, Jonas Jägermeyr, Gabriel B. Senay, Albert I. J. M. van Dijk, Juan P. Guerschman, Patrick W. Keys, Line J. Gordon, and Hubert H. G. Savenije
Hydrol. Earth Syst. Sci., 20, 1459–1481, https://doi.org/10.5194/hess-20-1459-2016, https://doi.org/10.5194/hess-20-1459-2016, 2016
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We present an "Earth observation-based" method for estimating root zone storage capacity – a critical parameter in land surface modelling that represents the maximum amount of soil moisture available for vegetation. Variability within a land cover type is captured, and a global model evaporation simulation is overall improved, particularly in sub-humid to humid regions with seasonality. This new method can eliminate the need for unreliable soil and root depth data in land surface modelling.
Huayang Cai, Hubert H. G. Savenije, Chenjuan Jiang, Lili Zhao, and Qingshu Yang
Hydrol. Earth Syst. Sci., 20, 1177–1195, https://doi.org/10.5194/hess-20-1177-2016, https://doi.org/10.5194/hess-20-1177-2016, 2016
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In this paper, an analytical model for tide-river dynamics has been used to understand the influence of tide and fresh water discharge on the rise of mean water level along the estuary, which remains poorly understood. It is shown that the mean water level is influenced primarily by the tide-river interaction in the tide-dominated region, while it is mainly controlled by the river flow in the upstream part of the estuary.
Remko C. Nijzink, Luis Samaniego, Juliane Mai, Rohini Kumar, Stephan Thober, Matthias Zink, David Schäfer, Hubert H. G. Savenije, and Markus Hrachowitz
Hydrol. Earth Syst. Sci., 20, 1151–1176, https://doi.org/10.5194/hess-20-1151-2016, https://doi.org/10.5194/hess-20-1151-2016, 2016
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The heterogeneity of landscapes in river basins strongly affects the hydrological response. In this study, the distributed mesoscale Hydrologic Model (mHM) was equipped with additional processes identified by landscapes within one modelling cell. Seven study catchments across Europe were selected to test the value of this additional sub-grid heterogeneity. In addition, the models were constrained based on expert knowledge. Generally, the modifications improved the representation of low flows.
Demetris Koutsoyiannis, Günter Blöschl, András Bárdossy, Christophe Cudennec, Denis Hughes, Alberto Montanari, Insa Neuweiler, and Hubert Savenije
Hydrol. Earth Syst. Sci., 20, 1081–1084, https://doi.org/10.5194/hess-20-1081-2016, https://doi.org/10.5194/hess-20-1081-2016, 2016
Chiara Volta, Goulven Gildas Laruelle, Sandra Arndt, and Pierre Regnier
Hydrol. Earth Syst. Sci., 20, 991–1030, https://doi.org/10.5194/hess-20-991-2016, https://doi.org/10.5194/hess-20-991-2016, 2016
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A generic estuarine model is applied to three idealized tidal estuaries representing the main hydro-geometrical estuarine classes. The study provides insight into the estuarine biogeochemical dynamics, in particular the air-water CO2/sub> flux, as well as the potential response to future environmental changes and to uncertainties in model parameter values. We believe that our approach could help improving upscaling strategies to better integrate estuaries in regional/global biogeochemical studies.
J. A. Bradley, A. M. Anesio, J. S. Singarayer, M. R. Heath, and S. Arndt
Geosci. Model Dev., 8, 3441–3470, https://doi.org/10.5194/gmd-8-3441-2015, https://doi.org/10.5194/gmd-8-3441-2015, 2015
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Recent climate warming causing ice retreat exposes new terrestrial ecosystems that have potentially significant yet largely unexplored roles on large-scale biogeochemical cycling and climate. SHIMMER (Soil biogeocHemIcal Model for Microbial Ecosystem Response) is a new numerical model designed to simulate microbial community establishment and elemental cycling (C, N and P) during initial soil formation in exposed glacier forefields. It is also transferable to other extreme ecosystem types.
J. I. A. Gisen, H. H. G. Savenije, and R. C. Nijzink
Hydrol. Earth Syst. Sci., 19, 2791–2803, https://doi.org/10.5194/hess-19-2791-2015, https://doi.org/10.5194/hess-19-2791-2015, 2015
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We revised the predictive equations for two calibrated parameters in salt intrusion model (the Van der Burgh coefficient K and dispersion coefficient D) using an extended database of 89 salinity profiles including 8 newly conducted salinity measurements. The revised predictive equations consist of easily measured parameters such as the geometry of estuary, tide, friction and the Richardson number. These equations are useful in obtaining the first estimate of salinity distribution in an estuary.
D. Diederen, H. H. G. Savenije, and M. Toffolon
Ocean Sci. Discuss., https://doi.org/10.5194/osd-12-925-2015, https://doi.org/10.5194/osd-12-925-2015, 2015
Revised manuscript not accepted
C. Le Quéré, R. Moriarty, R. M. Andrew, G. P. Peters, P. Ciais, P. Friedlingstein, S. D. Jones, S. Sitch, P. Tans, A. Arneth, T. A. Boden, L. Bopp, Y. Bozec, J. G. Canadell, L. P. Chini, F. Chevallier, C. E. Cosca, I. Harris, M. Hoppema, R. A. Houghton, J. I. House, A. K. Jain, T. Johannessen, E. Kato, R. F. Keeling, V. Kitidis, K. Klein Goldewijk, C. Koven, C. S. Landa, P. Landschützer, A. Lenton, I. D. Lima, G. Marland, J. T. Mathis, N. Metzl, Y. Nojiri, A. Olsen, T. Ono, S. Peng, W. Peters, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. E. Salisbury, U. Schuster, J. Schwinger, R. Séférian, J. Segschneider, T. Steinhoff, B. D. Stocker, A. J. Sutton, T. Takahashi, B. Tilbrook, G. R. van der Werf, N. Viovy, Y.-P. Wang, R. Wanninkhof, A. Wiltshire, and N. Zeng
Earth Syst. Sci. Data, 7, 47–85, https://doi.org/10.5194/essd-7-47-2015, https://doi.org/10.5194/essd-7-47-2015, 2015
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Carbon dioxide (CO2) emissions from human activities (burning fossil fuels and cement production, deforestation and other land-use change) are set to rise again in 2014.
This study (updated yearly) makes an accurate assessment of anthropogenic CO2 emissions and their redistribution between the atmosphere, ocean, and terrestrial biosphere in order to better understand the global carbon cycle, support the development of climate policies, and project future climate change.
S. Pande, L. Arkesteijn, H. Savenije, and L. A. Bastidas
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hessd-12-3945-2015, https://doi.org/10.5194/hessd-12-3945-2015, 2015
Revised manuscript not accepted
G. G. Laruelle, R. Lauerwald, J. Rotschi, P. A. Raymond, J. Hartmann, and P. Regnier
Biogeosciences, 12, 1447–1458, https://doi.org/10.5194/bg-12-1447-2015, https://doi.org/10.5194/bg-12-1447-2015, 2015
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This study quantifies the exchange of carbon dioxide (CO2) between the atmosphere and the land-ocean aquatic continuum (LOAC) of the northeast North American coast, which consists of rivers, estuaries, and the coastal ocean. Our analysis reveals significant variations of the flux intensity both in time and space across the study area. Ice cover, snowmelt, and the intensity of the estuarine filter are identified as important control factors of the CO2 exchange along the LOAC.
J. D. Edixhoven, J. Gupta, and H. H. G. Savenije
Earth Syst. Dynam., 5, 491–507, https://doi.org/10.5194/esd-5-491-2014, https://doi.org/10.5194/esd-5-491-2014, 2014
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Phosphate rock is a finite resource required for fertilizer production. Following a debate over the PR depletion timeline, global PR reserves were recently increased 4-fold based mainly on a restatement of Moroccan reserves. We review whether this restatement is methodologically compatible with resource terminology used in major resource classifications, whether resource classification nomenclature is sufficiently understood in the literature, and whether the recent restatements are reliable.
S. Gharari, M. Hrachowitz, F. Fenicia, H. Gao, and H. H. G. Savenije
Hydrol. Earth Syst. Sci., 18, 4839–4859, https://doi.org/10.5194/hess-18-4839-2014, https://doi.org/10.5194/hess-18-4839-2014, 2014
S. Gharari, M. Shafiei, M. Hrachowitz, R. Kumar, F. Fenicia, H. V. Gupta, and H. H. G. Savenije
Hydrol. Earth Syst. Sci., 18, 4861–4870, https://doi.org/10.5194/hess-18-4861-2014, https://doi.org/10.5194/hess-18-4861-2014, 2014
L. Wang-Erlandsson, R. J. van der Ent, L. J. Gordon, and H. H. G. Savenije
Earth Syst. Dynam., 5, 441–469, https://doi.org/10.5194/esd-5-441-2014, https://doi.org/10.5194/esd-5-441-2014, 2014
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We investigate the temporal characteristics of partitioned evaporation on land, and we present STEAM (Simple Terrestrial Evaporation to Atmosphere Model) -- a hydrological land-surface model developed to provide inputs to moisture tracking. The terrestrial residence timescale of transpiration (days to months) has larger inter-seasonal variation and is substantially longer than that of interception (hours). This can cause differences in moisture recycling, which is investigated more in Part 2.
R. J. van der Ent, L. Wang-Erlandsson, P. W. Keys, and H. H. G. Savenije
Earth Syst. Dynam., 5, 471–489, https://doi.org/10.5194/esd-5-471-2014, https://doi.org/10.5194/esd-5-471-2014, 2014
T. H. M. van Emmerik, Z. Li, M. Sivapalan, S. Pande, J. Kandasamy, H. H. G. Savenije, A. Chanan, and S. Vigneswaran
Hydrol. Earth Syst. Sci., 18, 4239–4259, https://doi.org/10.5194/hess-18-4239-2014, https://doi.org/10.5194/hess-18-4239-2014, 2014
H. Cai, H. H. G. Savenije, and C. Jiang
Hydrol. Earth Syst. Sci., 18, 4153–4168, https://doi.org/10.5194/hess-18-4153-2014, https://doi.org/10.5194/hess-18-4153-2014, 2014
M. Valk, H. H. G. Savenije, C. C. J. M. Tiberius, and W. M. J. Luxemburg
Hydrol. Earth Syst. Sci., 18, 2599–2613, https://doi.org/10.5194/hess-18-2599-2014, https://doi.org/10.5194/hess-18-2599-2014, 2014
G. Blöschl, A. Bárdossy, D. Koutsoyiannis, Z. W. Kundzewicz, I. Littlewood, A. Montanari, and H. Savenije
Hydrol. Earth Syst. Sci., 18, 2433–2435, https://doi.org/10.5194/hess-18-2433-2014, https://doi.org/10.5194/hess-18-2433-2014, 2014
C. Le Quéré, G. P. Peters, R. J. Andres, R. M. Andrew, T. A. Boden, P. Ciais, P. Friedlingstein, R. A. Houghton, G. Marland, R. Moriarty, S. Sitch, P. Tans, A. Arneth, A. Arvanitis, D. C. E. Bakker, L. Bopp, J. G. Canadell, L. P. Chini, S. C. Doney, A. Harper, I. Harris, J. I. House, A. K. Jain, S. D. Jones, E. Kato, R. F. Keeling, K. Klein Goldewijk, A. Körtzinger, C. Koven, N. Lefèvre, F. Maignan, A. Omar, T. Ono, G.-H. Park, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. Schwinger, J. Segschneider, B. D. Stocker, T. Takahashi, B. Tilbrook, S. van Heuven, N. Viovy, R. Wanninkhof, A. Wiltshire, and S. Zaehle
Earth Syst. Sci. Data, 6, 235–263, https://doi.org/10.5194/essd-6-235-2014, https://doi.org/10.5194/essd-6-235-2014, 2014
H. Gao, M. Hrachowitz, F. Fenicia, S. Gharari, and H. H. G. Savenije
Hydrol. Earth Syst. Sci., 18, 1895–1915, https://doi.org/10.5194/hess-18-1895-2014, https://doi.org/10.5194/hess-18-1895-2014, 2014
S. Pande, L. Arkesteijn, H. H. G. Savenije, and L. A. Bastidas
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hessd-11-2555-2014, https://doi.org/10.5194/hessd-11-2555-2014, 2014
Manuscript not accepted for further review
H. H. G. Savenije, A. Y. Hoekstra, and P. van der Zaag
Hydrol. Earth Syst. Sci., 18, 319–332, https://doi.org/10.5194/hess-18-319-2014, https://doi.org/10.5194/hess-18-319-2014, 2014
H. Cai, H. H. G. Savenije, and M. Toffolon
Hydrol. Earth Syst. Sci., 18, 287–304, https://doi.org/10.5194/hess-18-287-2014, https://doi.org/10.5194/hess-18-287-2014, 2014
R. J. van der Ent, O. A. Tuinenburg, H.-R. Knoche, H. Kunstmann, and H. H. G. Savenije
Hydrol. Earth Syst. Sci., 17, 4869–4884, https://doi.org/10.5194/hess-17-4869-2013, https://doi.org/10.5194/hess-17-4869-2013, 2013
B. M. C. Fischer, M. L. Mul, and H. H. G. Savenije
Hydrol. Earth Syst. Sci., 17, 2161–2170, https://doi.org/10.5194/hess-17-2161-2013, https://doi.org/10.5194/hess-17-2161-2013, 2013
G. G. Laruelle, H. H. Dürr, R. Lauerwald, J. Hartmann, C. P. Slomp, N. Goossens, and P. A. G. Regnier
Hydrol. Earth Syst. Sci., 17, 2029–2051, https://doi.org/10.5194/hess-17-2029-2013, https://doi.org/10.5194/hess-17-2029-2013, 2013
T. Euser, H. C. Winsemius, M. Hrachowitz, F. Fenicia, S. Uhlenbrook, and H. H. G. Savenije
Hydrol. Earth Syst. Sci., 17, 1893–1912, https://doi.org/10.5194/hess-17-1893-2013, https://doi.org/10.5194/hess-17-1893-2013, 2013
A. M. J. Coenders-Gerrits, L. Hopp, H. H. G. Savenije, and L. Pfister
Hydrol. Earth Syst. Sci., 17, 1749–1763, https://doi.org/10.5194/hess-17-1749-2013, https://doi.org/10.5194/hess-17-1749-2013, 2013
M. Hrachowitz, H. Savenije, T. A. Bogaard, D. Tetzlaff, and C. Soulsby
Hydrol. Earth Syst. Sci., 17, 533–564, https://doi.org/10.5194/hess-17-533-2013, https://doi.org/10.5194/hess-17-533-2013, 2013
V. Krumins, M. Gehlen, S. Arndt, P. Van Cappellen, and P. Regnier
Biogeosciences, 10, 371–398, https://doi.org/10.5194/bg-10-371-2013, https://doi.org/10.5194/bg-10-371-2013, 2013
Related subject area
Biogeosciences
Modelling the role of livestock grazing in C and N cycling in grasslands with LPJmL5.0-grazing
Implementation of trait-based ozone plant sensitivity in the Yale Interactive terrestrial Biosphere model v1.0 to assess global vegetation damage
The Permafrost and Organic LayEr module for Forest Models (POLE-FM) 1.0
CompLaB v1.0: a scalable pore-scale model for flow, biogeochemistry, microbial metabolism, and biofilm dynamics
Validation of a new spatially explicit process-based model (HETEROFOR) to simulate structurally and compositionally complex forest stands in eastern North America
Global agricultural ammonia emissions simulated with the ORCHIDEE land surface model
ForamEcoGEnIE 2.0: incorporating symbiosis and spine traits into a trait-based global planktic foraminiferal model
FABM-NflexPD 2.0: testing an instantaneous acclimation approach for modeling the implications of phytoplankton eco-physiology for the carbon and nutrient cycles
Evaluating the vegetation–atmosphere coupling strength of ORCHIDEE land surface model (v7266)
Non-Redfieldian carbon model for the Baltic Sea (ERGOM version 1.2) – implementation and budget estimates
Implementation of a new crop phenology and irrigation scheme in the ISBA land surface model using SURFEX_v8.1
Simulating long-term responses of soil organic matter turnover to substrate stoichiometry by abstracting fast and small-scale microbial processes: the Soil Enzyme Steady Allocation Model (SESAM; v3.0)
Modeling demographic-driven vegetation dynamics and ecosystem biogeochemical cycling in NASA GISS's Earth system model (ModelE-BiomeE v.1.0)
MEDFATE 2.8.1: A trait-enabled model to simulate Mediterranean forest function and dynamics at regional scales
Forest fluxes and mortality response to drought: model description (ORCHIDEE-CAN-NHA r7236) and evaluation at the Caxiuanã drought experiment
Matrix representation of lateral soil movements: scaling and calibrating CE-DYNAM (v2) at a continental level
CANOPS-GRB v1.0: a new Earth system model for simulating the evolution of ocean–atmosphere chemistry over geologic timescales
Low sensitivity of three terrestrial biosphere models to soil texture over the South American tropics
FESDIA (v1.0): exploring temporal variations of sediment biogeochemistry under the influence of flood events using numerical modelling
Impact of changes in climate and CO2 on the carbon storage potential of vegetation under limited water availability using SEIB-DGVM version 3.02
FORCCHN V2.0: an individual-based model for predicting multiscale forest carbon dynamics
Climate and parameter sensitivity and induced uncertainties in carbon stock projections for European forests (using LPJ-GUESS 4.0)
Use of genetic algorithms for ocean model parameter optimisation: a case study using PISCES-v2_RC for North Atlantic particulate organic carbon
SurEau-Ecos v2.0: a trait-based plant hydraulics model for simulations of plant water status and drought-induced mortality at the ecosystem level
Improved representation of plant physiology in the JULES-vn5.6 land surface model: photosynthesis, stomatal conductance and thermal acclimation
Representation of the phosphorus cycle in the Joint UK Land Environment Simulator (vn5.5_JULES-CNP)
CLM5-FruitTree: a new sub-model for deciduous fruit trees in the Community Land Model (CLM5)
The impact of hurricane disturbances on a tropical forest: implementing a palm plant functional type and hurricane disturbance module in ED2-HuDi V1.0
A validation standard for area of habitat maps for terrestrial birds and mammals
Soil Cycles of Elements simulator for Predicting TERrestrial regulation of greenhouse gases: SCEPTER v0.9
Using terrestrial laser scanning to constrain forest ecosystem structure and functions in the Ecosystem Demography model (ED2.2)
A map of global peatland extent created using machine learning (Peat-ML)
Implementation and evaluation of the unified stomatal optimization approach in the Functionally Assembled Terrestrial Ecosystem Simulator (FATES)
ECOSMO II(CHL): a marine biogeochemical model for the North Atlantic and the Arctic
Water Ecosystems Tool (WET) 1.0 – a new generation of flexible aquatic ecosystem model
Development of an open-source regional data assimilation system in PEcAn v. 1.7.2: application to carbon cycle reanalysis across the contiguous US using SIPNET
Predicting global terrestrial biomes with the LeNet convolutional neural network
KGML-ag: a modeling framework of knowledge-guided machine learning to simulate agroecosystems: a case study of estimating N2O emission using data from mesocosm experiments
Assessing methane emissions for northern peatlands in ORCHIDEE-PEAT revision 7020
A dynamic local-scale vegetation model for lycopsids (LYCOm v1.0)
Soil-related developments of the Biome-BGCMuSo v6.2 terrestrial ecosystem model
Global evaluation of the Ecosystem Demography model (ED v3.0)
A new snow module improves predictions of the isotope-enabled MAIDENiso forest growth model
Calibrating the soil organic carbon model Yasso20 with multiple datasets
The PFLOTRAN Reaction Sandbox
A new approach to simulate peat accumulation, degradation and stability in a global land surface scheme (JULES vn5.8_accumulate_soil) for northern and temperate peatlands
Definitions and methods to estimate regional land carbon fluxes for the second phase of the REgional Carbon Cycle Assessment and Processes Project (RECCAP-2)
Locating trees to mitigate outdoor radiant load of humans in urban areas using a metaheuristic hill-climbing algorithm – introducing TreePlanter v1.0
Sensitivity of asymmetric oxygen minimum zones to mixing intensity and stoichiometry in the tropical Pacific using a basin-scale model (OGCM-DMEC V1.4)
The importance of turbulent ocean–sea ice nutrient exchanges for simulation of ice algal biomass and production with CICE6.1 and Icepack 1.2
Jens Heinke, Susanne Rolinski, and Christoph Müller
Geosci. Model Dev., 16, 2455–2475, https://doi.org/10.5194/gmd-16-2455-2023, https://doi.org/10.5194/gmd-16-2455-2023, 2023
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We develop a livestock module for the global vegetation model LPJmL5.0 to simulate the impact of grazing dairy cattle on carbon and nitrogen cycles in grasslands. A novelty of the approach is that it accounts for the effect of feed quality on feed uptake and feed utilization by animals. The portioning of dietary nitrogen into milk, feces, and urine shows very good agreement with estimates obtained from animal trials.
Yimian Ma, Xu Yue, Stephen Sitch, Nadine Unger, Johan Uddling, Lina M. Mercado, Cheng Gong, Zhaozhong Feng, Huiyi Yang, Hao Zhou, Chenguang Tian, Yang Cao, Yadong Lei, Alexander W. Cheesman, Yansen Xu, and Maria Carolina Duran Rojas
Geosci. Model Dev., 16, 2261–2276, https://doi.org/10.5194/gmd-16-2261-2023, https://doi.org/10.5194/gmd-16-2261-2023, 2023
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Plants have been found to respond differently to O3, but the variations in the sensitivities have rarely been explained nor fully implemented in large-scale assessment. This study proposes a new O3 damage scheme with leaf mass per area to unify varied sensitivities for all plant species. Our assessment reveals an O3-induced reduction of 4.8 % in global GPP, with the highest reduction of >10 % for cropland, suggesting an emerging risk of crop yield loss under the threat of O3 pollution.
Winslow D. Hansen, Adrianna Foster, Benjamin Gaglioti, Rupert Seidl, and Werner Rammer
Geosci. Model Dev., 16, 2011–2036, https://doi.org/10.5194/gmd-16-2011-2023, https://doi.org/10.5194/gmd-16-2011-2023, 2023
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Permafrost and the thick soil-surface organic layers that insulate permafrost are important controls of boreal forest dynamics and carbon cycling. However, both are rarely included in process-based vegetation models used to simulate future ecosystem trajectories. To address this challenge, we developed a computationally efficient permafrost and soil organic layer module that operates at fine spatial (1 ha) and temporal (daily) resolutions.
Heewon Jung, Hyun-Seob Song, and Christof Meile
Geosci. Model Dev., 16, 1683–1696, https://doi.org/10.5194/gmd-16-1683-2023, https://doi.org/10.5194/gmd-16-1683-2023, 2023
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Microbial activity responsible for many chemical transformations depends on environmental conditions. These can vary locally, e.g., between poorly connected pores in porous media. We present a modeling framework that resolves such small spatial scales explicitly, accounts for feedback between transport and biogeochemical conditions, and can integrate state-of-the-art representations of microbes in a computationally efficient way, making it broadly applicable in science and engineering use cases.
Arthur Guignabert, Quentin Ponette, Frédéric André, Christian Messier, Philippe Nolet, and Mathieu Jonard
Geosci. Model Dev., 16, 1661–1682, https://doi.org/10.5194/gmd-16-1661-2023, https://doi.org/10.5194/gmd-16-1661-2023, 2023
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Spatially explicit and process-based models are useful to test innovative forestry practices under changing and uncertain conditions. However, their larger use is often limited by the restricted range of species and stand structures they can reliably account for. We therefore calibrated and evaluated such a model, HETEROFOR, for 23 species across southern Québec. Our results showed that the model is robust and can predict accurately both individual tree growth and stand dynamics in this region.
Maureen Beaudor, Nicolas Vuichard, Juliette Lathière, Nikolaos Evangeliou, Martin Van Damme, Lieven Clarisse, and Didier Hauglustaine
Geosci. Model Dev., 16, 1053–1081, https://doi.org/10.5194/gmd-16-1053-2023, https://doi.org/10.5194/gmd-16-1053-2023, 2023
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Ammonia mainly comes from the agricultural sector, and its volatilization relies on environmental variables. Our approach aims at benefiting from an Earth system model framework to estimate it. By doing so, we represent a consistent spatial distribution of the emissions' response to environmental changes.
We greatly improved the seasonal cycle of emissions compared with previous work. In addition, our model includes natural soil emissions (that are rarely represented in modeling approaches).
Rui Ying, Fanny M. Monteiro, Jamie D. Wilson, and Daniela N. Schmidt
Geosci. Model Dev., 16, 813–832, https://doi.org/10.5194/gmd-16-813-2023, https://doi.org/10.5194/gmd-16-813-2023, 2023
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Planktic foraminifera are marine-calcifying zooplankton; their shells are widely used to measure past temperature and productivity. We developed ForamEcoGEnIE 2.0 to simulate the four subgroups of this organism. We found that the relative abundance distribution agrees with marine sediment core-top data and that carbon export and biomass are close to sediment trap and plankton net observations respectively. This model provides the opportunity to study foraminiferal ecology in any geological era.
Onur Kerimoglu, Markus Pahlow, Prima Anugerahanti, and Sherwood Lan Smith
Geosci. Model Dev., 16, 95–108, https://doi.org/10.5194/gmd-16-95-2023, https://doi.org/10.5194/gmd-16-95-2023, 2023
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In classical models that track the changes in the elemental composition of phytoplankton, additional state variables are required for each element resolved. In this study, we show how the behavior of such an explicit model can be approximated using an
instantaneous acclimationapproach, in which the elemental composition of the phytoplankton is assumed to adjust to an optimal value instantaneously. Through rigorous tests, we evaluate the consistency of this scheme.
Yuan Zhang, Devaraju Narayanappa, Philippe Ciais, Wei Li, Daniel Goll, Nicolas Vuichard, Martin G. De Kauwe, Laurent Li, and Fabienne Maignan
Geosci. Model Dev., 15, 9111–9125, https://doi.org/10.5194/gmd-15-9111-2022, https://doi.org/10.5194/gmd-15-9111-2022, 2022
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There are a few studies to examine if current models correctly represented the complex processes of transpiration. Here, we use a coefficient Ω, which indicates if transpiration is mainly controlled by vegetation processes or by turbulence, to evaluate the ORCHIDEE model. We found a good performance of ORCHIDEE, but due to compensation of biases in different processes, we also identified how different factors control Ω and where the model is wrong. Our method is generic to evaluate other models.
Thomas Neumann, Hagen Radtke, Bronwyn Cahill, Martin Schmidt, and Gregor Rehder
Geosci. Model Dev., 15, 8473–8540, https://doi.org/10.5194/gmd-15-8473-2022, https://doi.org/10.5194/gmd-15-8473-2022, 2022
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Marine ecosystem models are usually constrained by the elements nitrogen and phosphorus and consider carbon in organic matter in a fixed ratio. Recent observations show a substantial deviation from the simulated carbon cycle variables. In this study, we present a marine ecosystem model for the Baltic Sea which allows for a flexible uptake ratio for carbon, nitrogen, and phosphorus. With this extension, the model reflects much more reasonable variables of the marine carbon cycle.
Arsène Druel, Simon Munier, Anthony Mucia, Clément Albergel, and Jean-Christophe Calvet
Geosci. Model Dev., 15, 8453–8471, https://doi.org/10.5194/gmd-15-8453-2022, https://doi.org/10.5194/gmd-15-8453-2022, 2022
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Crop phenology and irrigation is implemented into a land surface model able to work at a global scale. A case study is presented over Nebraska (USA). Simulations with and without the new scheme are compared to different satellite-based observations. The model is able to produce a realistic yearly irrigation water amount. The irrigation scheme improves the simulated leaf area index, gross primary productivity, evapotransipiration, and land surface temperature.
Thomas Wutzler, Lin Yu, Marion Schrumpf, and Sönke Zaehle
Geosci. Model Dev., 15, 8377–8393, https://doi.org/10.5194/gmd-15-8377-2022, https://doi.org/10.5194/gmd-15-8377-2022, 2022
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Soil microbes process soil organic matter and affect carbon storage and plant nutrition at the ecosystem scale. We hypothesized that decadal dynamics is constrained by the ratios of elements in litter inputs, microbes, and matter and that microbial community optimizes growth. This allowed the SESAM model to descibe decadal-term carbon sequestration in soils and other biogeochemical processes explicitly accounting for microbial processes but without its problematic fine-scale parameterization.
Ensheng Weng, Igor Aleinov, Ram Singh, Michael J. Puma, Sonali S. McDermid, Nancy Y. Kiang, Maxwell Kelley, Kevin Wilcox, Ray Dybzinski, Caroline E. Farrior, Stephen W. Pacala, and Benjamin I. Cook
Geosci. Model Dev., 15, 8153–8180, https://doi.org/10.5194/gmd-15-8153-2022, https://doi.org/10.5194/gmd-15-8153-2022, 2022
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We develop a demographic vegetation model to improve the representation of terrestrial vegetation dynamics and ecosystem biogeochemical cycles in the Goddard Institute for Space Studies ModelE. The individual-based competition for light and soil resources makes the modeling of eco-evolutionary optimality possible. This model will enable ModelE to simulate long-term biogeophysical and biogeochemical feedbacks between the climate system and land ecosystems at decadal to centurial temporal scales.
Miquel De Cáceres, Roberto Molowny-Horas, Antoine Cabon, Jordi Martínez-Vilalta, Maurizio Mencuccini, Raúl García-Valdés, Daniel Nadal-Sala, Santiago Sabaté, Nicolas Martin-StPaul, Xavier Morin, Enric Batllori, and Aitor Améztegui
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2022-243, https://doi.org/10.5194/gmd-2022-243, 2022
Revised manuscript accepted for GMD
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Regional-level applications of dynamic vegetation models are challenging because they need to accommodate the variation in plant functional diversity. This can be done by estimating parameters from available plant trait databases while adopting alternative solutions for missing data. Here we present the design, parameterization and evaluation of MEDFATE, a novel model of forest dynamics for its application over a region in the Western Mediterranean Basin.
Yitong Yao, Emilie Joetzjer, Philippe Ciais, Nicolas Viovy, Fabio Cresto Aleina, Jerome Chave, Lawren Sack, Megan Bartlett, Patrick Meir, Rosie Fisher, and Sebastiaan Luyssaert
Geosci. Model Dev., 15, 7809–7833, https://doi.org/10.5194/gmd-15-7809-2022, https://doi.org/10.5194/gmd-15-7809-2022, 2022
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To facilitate more mechanistic modeling of drought effects on forest dynamics, our study implements a hydraulic module to simulate the vertical water flow, change in water storage and percentage loss of stem conductance (PLC). With the relationship between PLC and tree mortality, our model can successfully reproduce the large biomass drop observed under throughfall exclusion. Our hydraulic module provides promising avenues benefiting the prediction for mortality under future drought events.
Arthur Nicolaus Fendrich, Philippe Ciais, Emanuele Lugato, Marco Carozzi, Bertrand Guenet, Pasquale Borrelli, Victoria Naipal, Matthew McGrath, Philippe Martin, and Panos Panagos
Geosci. Model Dev., 15, 7835–7857, https://doi.org/10.5194/gmd-15-7835-2022, https://doi.org/10.5194/gmd-15-7835-2022, 2022
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Currently, spatially explicit models for soil carbon stock can simulate the impacts of several changes. However, they do not incorporate the erosion, lateral transport, and deposition (ETD) of soil material. The present work developed ETD formulation, illustrated model calibration and validation for Europe, and presented the results for a depositional site. We expect that our work advances ETD models' description and facilitates their reproduction and incorporation in land surface models.
Kazumi Ozaki, Devon B. Cole, Christopher T. Reinhard, and Eiichi Tajika
Geosci. Model Dev., 15, 7593–7639, https://doi.org/10.5194/gmd-15-7593-2022, https://doi.org/10.5194/gmd-15-7593-2022, 2022
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A new biogeochemical model (CANOPS-GRB v1.0) for assessing the redox stability and dynamics of the ocean–atmosphere system on geologic timescales has been developed. In this paper, we present a full description of the model and its performance. CANOPS-GRB is a useful tool for understanding the factors regulating atmospheric O2 level and has the potential to greatly refine our current understanding of Earth's oxygenation history.
Félicien Meunier, Wim Verbruggen, Hans Verbeeck, and Marc Peaucelle
Geosci. Model Dev., 15, 7573–7591, https://doi.org/10.5194/gmd-15-7573-2022, https://doi.org/10.5194/gmd-15-7573-2022, 2022
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Drought stress occurs in plants when water supply (i.e. root water uptake) is lower than the water demand (i.e. atmospheric demand). It is strongly related to soil properties and expected to increase in intensity and frequency in the tropics due to climate change. In this study, we show that contrary to the expectations, state-of-the-art terrestrial biosphere models are mostly insensitive to soil texture and hence probably inadequate to reproduce in silico the plant water status in drying soils.
Stanley I. Nmor, Eric Viollier, Lucie Pastor, Bruno Lansard, Christophe Rabouille, and Karline Soetaert
Geosci. Model Dev., 15, 7325–7351, https://doi.org/10.5194/gmd-15-7325-2022, https://doi.org/10.5194/gmd-15-7325-2022, 2022
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The coastal marine environment serves as a transition zone in the land–ocean continuum and is susceptible to episodic phenomena such as flash floods, which cause massive organic matter deposition. Here, we present a model of sediment early diagenesis that explicitly describes this type of deposition while also incorporating unique flood deposit characteristics. This model can be used to investigate the temporal evolution of marine sediments following abrupt changes in environmental conditions.
Shanlin Tong, Weiguang Wang, Jie Chen, Chong-Yu Xu, Hisashi Sato, and Guoqing Wang
Geosci. Model Dev., 15, 7075–7098, https://doi.org/10.5194/gmd-15-7075-2022, https://doi.org/10.5194/gmd-15-7075-2022, 2022
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Plant carbon storage potential is central to moderate atmospheric CO2 concentration buildup and mitigation of climate change. There is an ongoing debate about the main driver of carbon storage. To reconcile this discrepancy, we use SEIB-DGVM to investigate the trend and response mechanism of carbon stock fractions among water limitation regions. Results show that the impact of CO2 and temperature on carbon stock depends on water limitation, offering a new perspective on carbon–water coupling.
Jing Fang, Herman H. Shugart, Feng Liu, Xiaodong Yan, Yunkun Song, and Fucheng Lv
Geosci. Model Dev., 15, 6863–6872, https://doi.org/10.5194/gmd-15-6863-2022, https://doi.org/10.5194/gmd-15-6863-2022, 2022
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Our study provided a detailed description and a package of an individual tree-based carbon model, FORCCHN2. This model used non-structural carbohydrate (NSC) pools to couple tree growth and phenology. The model could reproduce daily carbon fluxes across Northern Hemisphere forests. Given the potential importance of the application of this model, there is substantial scope for using FORCCHN2 in fields as diverse as forest ecology, climate change, and carbon estimation.
Johannes Oberpriller, Christine Herschlein, Peter Anthoni, Almut Arneth, Andreas Krause, Anja Rammig, Mats Lindeskog, Stefan Olin, and Florian Hartig
Geosci. Model Dev., 15, 6495–6519, https://doi.org/10.5194/gmd-15-6495-2022, https://doi.org/10.5194/gmd-15-6495-2022, 2022
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Understanding uncertainties of projected ecosystem dynamics under environmental change is of immense value for research and climate change policy. Here, we analyzed these across European forests. We find that uncertainties are dominantly induced by parameters related to water, mortality, and climate, with an increasing importance of climate from north to south. These results highlight that climate not only contributes uncertainty but also modifies uncertainties in other ecosystem processes.
Marcus Falls, Raffaele Bernardello, Miguel Castrillo, Mario Acosta, Joan Llort, and Martí Galí
Geosci. Model Dev., 15, 5713–5737, https://doi.org/10.5194/gmd-15-5713-2022, https://doi.org/10.5194/gmd-15-5713-2022, 2022
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This paper describes and tests a method which uses a genetic algorithm (GA), a type of optimisation algorithm, on an ocean biogeochemical model. The aim is to produce a set of numerical parameters that best reflect the observed data of particulate organic carbon in a specific region of the ocean. We show that the GA can provide optimised model parameters in a robust and efficient manner and can also help detect model limitations, ultimately leading to a reduction in the model uncertainties.
Julien Ruffault, François Pimont, Hervé Cochard, Jean-Luc Dupuy, and Nicolas Martin-StPaul
Geosci. Model Dev., 15, 5593–5626, https://doi.org/10.5194/gmd-15-5593-2022, https://doi.org/10.5194/gmd-15-5593-2022, 2022
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A widespread increase in tree mortality has been observed around the globe, and this trend is likely to continue because of ongoing climate change. Here we present SurEau-Ecos, a trait-based plant hydraulic model to predict tree desiccation and mortality. SurEau-Ecos can help determine the areas and ecosystems that are most vulnerable to drying conditions.
Rebecca J. Oliver, Lina M. Mercado, Doug B. Clark, Chris Huntingford, Christopher M. Taylor, Pier Luigi Vidale, Patrick C. McGuire, Markus Todt, Sonja Folwell, Valiyaveetil Shamsudheen Semeena, and Belinda E. Medlyn
Geosci. Model Dev., 15, 5567–5592, https://doi.org/10.5194/gmd-15-5567-2022, https://doi.org/10.5194/gmd-15-5567-2022, 2022
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We introduce new representations of plant physiological processes into a land surface model. Including new biological understanding improves modelled carbon and water fluxes for the present in tropical and northern-latitude forests. Future climate simulations demonstrate the sensitivity of photosynthesis to temperature is important for modelling carbon cycle dynamics in a warming world. Accurate representation of these processes in models is necessary for robust predictions of climate change.
Mahdi André Nakhavali, Lina M. Mercado, Iain P. Hartley, Stephen Sitch, Fernanda V. Cunha, Raffaello di Ponzio, Laynara F. Lugli, Carlos A. Quesada, Kelly M. Andersen, Sarah E. Chadburn, Andy J. Wiltshire, Douglas B. Clark, Gyovanni Ribeiro, Lara Siebert, Anna C. M. Moraes, Jéssica Schmeisk Rosa, Rafael Assis, and José L. Camargo
Geosci. Model Dev., 15, 5241–5269, https://doi.org/10.5194/gmd-15-5241-2022, https://doi.org/10.5194/gmd-15-5241-2022, 2022
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In tropical ecosystems, the availability of rock-derived elements such as P can be very low. Thus, without a representation of P cycling, tropical forest responses to rising atmospheric CO2 conditions in areas such as Amazonia remain highly uncertain. We introduced P dynamics and its interactions with the N and P cycles into the JULES model. Our results highlight the potential for high P limitation and therefore lower CO2 fertilization capacity in the Amazon forest with low-fertility soils.
Olga Dombrowski, Cosimo Brogi, Harrie-Jan Hendricks Franssen, Damiano Zanotelli, and Heye Bogena
Geosci. Model Dev., 15, 5167–5193, https://doi.org/10.5194/gmd-15-5167-2022, https://doi.org/10.5194/gmd-15-5167-2022, 2022
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Soil carbon storage and food production of fruit orchards will be influenced by climate change. However, they lack representation in models that study such processes. We developed and tested a new sub-model, CLM5-FruitTree, that describes growth, biomass distribution, and management practices in orchards. The model satisfactorily predicted yield and exchange of carbon, energy, and water in an apple orchard and can be used to study land surface processes in fruit orchards at different scales.
Jiaying Zhang, Rafael L. Bras, Marcos Longo, and Tamara Heartsill Scalley
Geosci. Model Dev., 15, 5107–5126, https://doi.org/10.5194/gmd-15-5107-2022, https://doi.org/10.5194/gmd-15-5107-2022, 2022
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We implemented hurricane disturbance in a vegetation dynamics model and calibrated the model with observations of a tropical forest. We used the model to study forest recovery from hurricane disturbance and found that a single hurricane disturbance enhances AGB and BA in the long term compared with a no-hurricane situation. The model developed and results presented in this study can be utilized to understand the impact of hurricane disturbances on forest recovery under the changing climate.
Prabhat Raj Dahal, Maria Lumbierres, Stuart H. M. Butchart, Paul F. Donald, and Carlo Rondinini
Geosci. Model Dev., 15, 5093–5105, https://doi.org/10.5194/gmd-15-5093-2022, https://doi.org/10.5194/gmd-15-5093-2022, 2022
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This paper describes the validation of area of habitat (AOH) maps produced for terrestrial birds and mammals. The main objective was to assess the accuracy of the maps based on independent data. We used open access data from repositories, such as ebird and gbif to check if our maps were a better reflection of species' distribution than random. When points were not available we used logistic models to validate the AOH maps. The majority of AOH maps were found to have a high accuracy.
Yoshiki Kanzaki, Shuang Zhang, Noah J. Planavsky, and Christopher T. Reinhard
Geosci. Model Dev., 15, 4959–4990, https://doi.org/10.5194/gmd-15-4959-2022, https://doi.org/10.5194/gmd-15-4959-2022, 2022
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Increasing carbon dioxide in the atmosphere is an urgent issue in the coming century. Enhanced rock weathering in soils can be one of the most efficient C capture strategies. On the basis as a weathering simulator, the newly developed SCEPTER model implements bio-mixing by fauna/humans and enables organic matter and crushed rocks/minerals at the soil surface with an option to track their particle size distributions. Those features can be useful for evaluating the carbon capture efficiency.
Félicien Meunier, Sruthi M. Krishna Moorthy, Marc Peaucelle, Kim Calders, Louise Terryn, Wim Verbruggen, Chang Liu, Ninni Saarinen, Niall Origo, Joanne Nightingale, Mathias Disney, Yadvinder Malhi, and Hans Verbeeck
Geosci. Model Dev., 15, 4783–4803, https://doi.org/10.5194/gmd-15-4783-2022, https://doi.org/10.5194/gmd-15-4783-2022, 2022
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We integrated state-of-the-art observations of the structure of the vegetation in a temperate forest to constrain a vegetation model that aims to reproduce such an ecosystem in silico. We showed that the use of this information helps to constrain the model structure, its critical parameters, as well as its initial state. This research confirms the critical importance of the representation of the vegetation structure in vegetation models and proposes a method to overcome this challenge.
Joe R. Melton, Ed Chan, Koreen Millard, Matthew Fortier, R. Scott Winton, Javier M. Martín-López, Hinsby Cadillo-Quiroz, Darren Kidd, and Louis V. Verchot
Geosci. Model Dev., 15, 4709–4738, https://doi.org/10.5194/gmd-15-4709-2022, https://doi.org/10.5194/gmd-15-4709-2022, 2022
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Peat-ML is a high-resolution global peatland extent map generated using machine learning techniques. Peatlands are important in the global carbon and water cycles, but their extent is poorly known. We generated Peat-ML using drivers of peatland formation including climate, soil, geomorphology, and vegetation data, and we train the model with regional peatland maps. Our accuracy estimation approaches suggest Peat-ML is of similar or higher quality than other available peatland mapping products.
Qianyu Li, Shawn P. Serbin, Julien Lamour, Kenneth J. Davidson, Kim S. Ely, and Alistair Rogers
Geosci. Model Dev., 15, 4313–4329, https://doi.org/10.5194/gmd-15-4313-2022, https://doi.org/10.5194/gmd-15-4313-2022, 2022
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Stomatal conductance is the rate of water release from leaves’ pores. We implemented an optimal stomatal conductance model in a vegetation model. We then tested and compared it with the existing empirical model in terms of model responses to key environmental variables. We also evaluated the model with measurements at a tropical forest site. Our study suggests that the parameterization of conductance models and current model response to drought are the critical areas for improving models.
Veli Çağlar Yumruktepe, Annette Samuelsen, and Ute Daewel
Geosci. Model Dev., 15, 3901–3921, https://doi.org/10.5194/gmd-15-3901-2022, https://doi.org/10.5194/gmd-15-3901-2022, 2022
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We describe the coupled bio-physical model ECOSMO II(CHL), which is used for regional configurations for the North Atlantic and the Arctic hind-casting and operational purposes. The model is consistent with the large-scale climatological nutrient settings and is capable of representing regional and seasonal changes, and model primary production agrees with previous measurements. For the users of this model, this paper provides the underlying science, model evaluation and its development.
Nicolas Azaña Schnedler-Meyer, Tobias Kuhlmann Andersen, Fenjuan Rose Schmidt Hu, Karsten Bolding, Anders Nielsen, and Dennis Trolle
Geosci. Model Dev., 15, 3861–3878, https://doi.org/10.5194/gmd-15-3861-2022, https://doi.org/10.5194/gmd-15-3861-2022, 2022
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We present the Water Ecosystems Tool (WET) – a new modular aquatic ecosystem model configurable to a wide array of physical setups, ecosystems and research questions based on the popular FABM–PCLake model. We aim for the model to become a community staple, thus helping to consolidate the state of the art under a few flexible models, with the aim of improving comparability across studies and preventing the
re-inventions of the wheelthat are common to our scientific modeling community.
Hamze Dokoohaki, Bailey D. Morrison, Ann Raiho, Shawn P. Serbin, Katie Zarada, Luke Dramko, and Michael Dietze
Geosci. Model Dev., 15, 3233–3252, https://doi.org/10.5194/gmd-15-3233-2022, https://doi.org/10.5194/gmd-15-3233-2022, 2022
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We present a new terrestrial carbon cycle data assimilation system, built on the PEcAn model–data eco-informatics system, and its application for the development of a proof-of-concept carbon
reanalysisproduct that harmonizes carbon pools (leaf, wood, soil) and fluxes (GPP, Ra, Rh, NEE) across the contiguous United States from 1986–2019. Here, we build on a decade of work on uncertainty propagation to generate the most complete and robust uncertainty accounting available to date.
Hisashi Sato and Takeshi Ise
Geosci. Model Dev., 15, 3121–3132, https://doi.org/10.5194/gmd-15-3121-2022, https://doi.org/10.5194/gmd-15-3121-2022, 2022
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Accurately predicting global coverage of terrestrial biome is one of the earliest ecological concerns, and many empirical schemes have been proposed to characterize their relationship. Here, we demonstrate an accurate and practical method to construct empirical models for operational biome mapping via a convolutional neural network (CNN) approach.
Licheng Liu, Shaoming Xu, Jinyun Tang, Kaiyu Guan, Timothy J. Griffis, Matthew D. Erickson, Alexander L. Frie, Xiaowei Jia, Taegon Kim, Lee T. Miller, Bin Peng, Shaowei Wu, Yufeng Yang, Wang Zhou, Vipin Kumar, and Zhenong Jin
Geosci. Model Dev., 15, 2839–2858, https://doi.org/10.5194/gmd-15-2839-2022, https://doi.org/10.5194/gmd-15-2839-2022, 2022
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By incorporating the domain knowledge into a machine learning model, KGML-ag overcomes the well-known limitations of process-based models due to insufficient representations and constraints, and unlocks the “black box” of machine learning models. Therefore, KGML-ag can outperform existing approaches on capturing the hot moment and complex dynamics of N2O flux. This study will be a critical reference for the new generation of modeling paradigm for biogeochemistry and other geoscience processes.
Elodie Salmon, Fabrice Jégou, Bertrand Guenet, Line Jourdain, Chunjing Qiu, Vladislav Bastrikov, Christophe Guimbaud, Dan Zhu, Philippe Ciais, Philippe Peylin, Sébastien Gogo, Fatima Laggoun-Défarge, Mika Aurela, M. Syndonia Bret-Harte, Jiquan Chen, Bogdan H. Chojnicki, Housen Chu, Colin W. Edgar, Eugenie S. Euskirchen, Lawrence B. Flanagan, Krzysztof Fortuniak, David Holl, Janina Klatt, Olaf Kolle, Natalia Kowalska, Lars Kutzbach, Annalea Lohila, Lutz Merbold, Włodzimierz Pawlak, Torsten Sachs, and Klaudia Ziemblińska
Geosci. Model Dev., 15, 2813–2838, https://doi.org/10.5194/gmd-15-2813-2022, https://doi.org/10.5194/gmd-15-2813-2022, 2022
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A methane model that features methane production and transport by plants, the ebullition process and diffusion in soil, oxidation to CO2, and CH4 fluxes to the atmosphere has been embedded in the ORCHIDEE-PEAT land surface model, which includes an explicit representation of northern peatlands. This model, ORCHIDEE-PCH4, was calibrated and evaluated on 14 peatland sites. Results show that the model is sensitive to temperature and substrate availability over the top 75 cm of soil depth.
Suman Halder, Susanne K. M. Arens, Kai Jensen, Tais W. Dahl, and Philipp Porada
Geosci. Model Dev., 15, 2325–2343, https://doi.org/10.5194/gmd-15-2325-2022, https://doi.org/10.5194/gmd-15-2325-2022, 2022
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A dynamic vegetation model, designed to estimate potential impacts of early vascular vegetation, namely, lycopsids, on the biogeochemical cycle at a local scale. Lycopsid Model (LYCOm) estimates the productivity and physiological properties of lycopsids across a broad climatic range along with natural selection, which is then utilized to adjudge their weathering potential. It lays the foundation for estimation of their impacts during their long evolutionary history starting from the Ordovician.
Dóra Hidy, Zoltán Barcza, Roland Hollós, Laura Dobor, Tamás Ács, Dóra Zacháry, Tibor Filep, László Pásztor, Dóra Incze, Márton Dencső, Eszter Tóth, Katarína Merganičová, Peter Thornton, Steven Running, and Nándor Fodor
Geosci. Model Dev., 15, 2157–2181, https://doi.org/10.5194/gmd-15-2157-2022, https://doi.org/10.5194/gmd-15-2157-2022, 2022
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Biogeochemical models used by the scientific community can support society in the quantification of the expected environmental impacts caused by global climate change. The Biome-BGCMuSo v6.2 biogeochemical model has been created by implementing a lot of developments related to soil hydrology as well as the soil carbon and nitrogen cycle and by integrating crop model components. Detailed descriptions of developments with case studies are presented in this paper.
Lei Ma, George Hurtt, Lesley Ott, Ritvik Sahajpal, Justin Fisk, Rachel Lamb, Hao Tang, Steve Flanagan, Louise Chini, Abhishek Chatterjee, and Joseph Sullivan
Geosci. Model Dev., 15, 1971–1994, https://doi.org/10.5194/gmd-15-1971-2022, https://doi.org/10.5194/gmd-15-1971-2022, 2022
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We present a global version of the Ecosystem Demography (ED) model which can track vegetation 3-D structure and scale up ecological processes from individual vegetation to ecosystem scale. Model evaluation against multiple benchmarking datasets demonstrated the model’s capability to simulate global vegetation dynamics across a range of temporal and spatial scales. With this version, ED has the potential to be linked with remote sensing observations to address key scientific questions.
Ignacio Hermoso de Mendoza, Etienne Boucher, Fabio Gennaretti, Aliénor Lavergne, Robert Field, and Laia Andreu-Hayles
Geosci. Model Dev., 15, 1931–1952, https://doi.org/10.5194/gmd-15-1931-2022, https://doi.org/10.5194/gmd-15-1931-2022, 2022
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We modify the numerical model of forest growth MAIDENiso by explicitly simulating snow. This allows us to use the model in boreal environments, where snow is dominant. We tested the performance of the model before and after adding snow, using it at two Canadian sites to simulate tree-ring isotopes and comparing with local observations. We found that modelling snow improves significantly the simulation of the hydrological cycle, the plausibility of the model and the simulated isotopes.
Toni Viskari, Janne Pusa, Istem Fer, Anna Repo, Julius Vira, and Jari Liski
Geosci. Model Dev., 15, 1735–1752, https://doi.org/10.5194/gmd-15-1735-2022, https://doi.org/10.5194/gmd-15-1735-2022, 2022
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We wanted to examine how the chosen measurement data and calibration process affect soil organic carbon model calibration. In our results we found that there is a benefit in using data from multiple litter-bag decomposition experiments simultaneously, even with the required assumptions. Additionally, due to the amount of noise and uncertainties in the system, more advanced calibration methods should be used to parameterize the models.
Glenn E. Hammond
Geosci. Model Dev., 15, 1659–1676, https://doi.org/10.5194/gmd-15-1659-2022, https://doi.org/10.5194/gmd-15-1659-2022, 2022
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This paper describes a simplified interface for implementing and testing new chemical reactions within the reactive transport simulator PFLOTRAN. The paper describes the interface, providing example code for the interface. The paper includes several chemical reactions implemented through the interface.
Sarah E. Chadburn, Eleanor J. Burke, Angela V. Gallego-Sala, Noah D. Smith, M. Syndonia Bret-Harte, Dan J. Charman, Julia Drewer, Colin W. Edgar, Eugenie S. Euskirchen, Krzysztof Fortuniak, Yao Gao, Mahdi Nakhavali, Włodzimierz Pawlak, Edward A. G. Schuur, and Sebastian Westermann
Geosci. Model Dev., 15, 1633–1657, https://doi.org/10.5194/gmd-15-1633-2022, https://doi.org/10.5194/gmd-15-1633-2022, 2022
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We present a new method to include peatlands in an Earth system model (ESM). Peatlands store huge amounts of carbon that accumulates very slowly but that can be rapidly destabilised, emitting greenhouse gases. Our model captures the dynamic nature of peat by simulating the change in surface height and physical properties of the soil as carbon is added or decomposed. Thus, we model, for the first time in an ESM, peat dynamics and its threshold behaviours that can lead to destabilisation.
Philippe Ciais, Ana Bastos, Frédéric Chevallier, Ronny Lauerwald, Ben Poulter, Josep G. Canadell, Gustaf Hugelius, Robert B. Jackson, Atul Jain, Matthew Jones, Masayuki Kondo, Ingrid T. Luijkx, Prabir K. Patra, Wouter Peters, Julia Pongratz, Ana Maria Roxana Petrescu, Shilong Piao, Chunjing Qiu, Celso Von Randow, Pierre Regnier, Marielle Saunois, Robert Scholes, Anatoly Shvidenko, Hanqin Tian, Hui Yang, Xuhui Wang, and Bo Zheng
Geosci. Model Dev., 15, 1289–1316, https://doi.org/10.5194/gmd-15-1289-2022, https://doi.org/10.5194/gmd-15-1289-2022, 2022
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The second phase of the Regional Carbon Cycle Assessment and Processes (RECCAP) will provide updated quantification and process understanding of CO2, CH4, and N2O emissions and sinks for ten regions of the globe. In this paper, we give definitions, review different methods, and make recommendations for estimating different components of the total land–atmosphere carbon exchange for each region in a consistent and complete approach.
Nils Wallenberg, Fredrik Lindberg, and David Rayner
Geosci. Model Dev., 15, 1107–1128, https://doi.org/10.5194/gmd-15-1107-2022, https://doi.org/10.5194/gmd-15-1107-2022, 2022
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Exposure to solar radiation on clear and warm days can lead to heat stress and thermal discomfort. This can be alleviated by planting trees providing shade in particularly warm areas. Here, we use a model to locate trees and optimize their blocking of solar radiation. Our results show that locations can differ depending, e.g., tree size (juvenile or mature) and number of trees that are positioned simultaneously. The model is available as a tool for accessibility by researchers and others.
Kai Wang, Xiujun Wang, Raghu Murtugudde, Dongxiao Zhang, and Rong-Hua Zhang
Geosci. Model Dev., 15, 1017–1035, https://doi.org/10.5194/gmd-15-1017-2022, https://doi.org/10.5194/gmd-15-1017-2022, 2022
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We use observational data of dissolved oxygen (DO) and organic nitrogen to calibrate a basin-scale model (OGCM-DEMC V1.4) and then evaluate model capacity for simulating mid-depth DO in the tropical Pacific. Sensitivity studies show that enhanced vertical mixing combined with reduced biological consumption performs well in reproducing asymmetric oxygen minimum zones (OMZs). We find that DO is more sensitive to biological processes in the upper OMZs but to physical processes in the lower OMZs.
Pedro Duarte, Philipp Assmy, Karley Campbell, and Arild Sundfjord
Geosci. Model Dev., 15, 841–857, https://doi.org/10.5194/gmd-15-841-2022, https://doi.org/10.5194/gmd-15-841-2022, 2022
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Sea ice modeling is an important part of Earth system models (ESMs). The results of ESMs are used by the Intergovernmental Panel on Climate Change in their reports. In this study we present an improvement to calculate the exchange of nutrients between the ocean and the sea ice. This nutrient exchange is an essential process to keep the ice-associated ecosystem functioning. We found out that previous calculation methods may underestimate the primary production of the ice-associated ecosystem.
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