Articles | Volume 16, issue 22
https://doi.org/10.5194/gmd-16-6773-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-16-6773-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Model description paper
| 
22 Nov 2023
Model description paper |
| 22 Nov 2023
| 22 Nov 2023
Peatland-VU-NUCOM (PVN 1.0): using dynamic plant functional types to model peatland vegetation, CH4, and CO2 emissions
Tanya J. R. Lippmann
CORRESPONDING AUTHOR
Department of Earth Sciences, Vrije Universiteit, Amsterdam, the Netherlands
Ype van der Velde
Department of Earth Sciences, Vrije Universiteit, Amsterdam, the Netherlands
Monique M. P. D. Heijmans
Department of Environmental Sciences, Wageningen University and Research, Wageningen, the Netherlands
Han Dolman
Royal Netherlands Institute for Sea Research, Texel, the Netherlands
Netherlands Earth System Science Center, Utrecht University, Utrecht, the Netherlands
Dimmie M. D. Hendriks
Department of Soil and Groundwater Systems, Deltares Research Institute, Utrecht, the Netherlands
Ko van Huissteden
Department of Earth Sciences, Vrije Universiteit, Amsterdam, the Netherlands
VOF Kytalyk Carbon Cycle Research, Epse, the Netherlands
Related authors
Tanya Juliette Rebecca Lippmann, Monique Heijmans, Han Dolman, Ype van der Velde, Dimmie Hendriks, and Ko van Huissteden
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2022-143, https://doi.org/10.5194/gmd-2022-143, 2022
Preprint withdrawn
Short summary
Short summary
To assess the impact of vegetation on GHG fluxes in peatlands, we developed a new model, Peatland-VU-NUCOM (PVN). These results showed that plant communities impact GHG emissions, indicating that plant community re-establishment is a critical component of peatland restoration. This is the first time that a peatland emissions model investigated the role of re-introducing peat forming vegetation on GHG emissions.
Tanya J. R. Lippmann, Michiel H. in 't Zandt, Nathalie N. L. Van der Putten, Freek S. Busschers, Marc P. Hijma, Pieter van der Velden, Tim de Groot, Zicarlo van Aalderen, Ove H. Meisel, Caroline P. Slomp, Helge Niemann, Mike S. M. Jetten, Han A. J. Dolman, and Cornelia U. Welte
Biogeosciences, 18, 5491–5511, https://doi.org/10.5194/bg-18-5491-2021, https://doi.org/10.5194/bg-18-5491-2021, 2021
Short summary
Short summary
This paper is a step towards understanding the basal peat ecosystem beneath the North Sea. Plant remains followed parallel sequences. Methane concentrations were low with local exceptions, with the source likely being trapped pockets of millennia-old methane. Microbial community structure indicated the absence of a biofilter and was diverse across sites. Large carbon stores in the presence of methanogens and in the absence of methanotrophs have the potential to be metabolized into methane.
Ralf C. H. Aben, Daniël van de Craats, Jim Boonman, Stijn H. Peeters, Bart Vriend, Coline C. F. Boonman, Ype van der Velde, Gilles Erkens, and Merit van den Berg
Biogeosciences, 21, 4099–4118, https://doi.org/10.5194/bg-21-4099-2024, https://doi.org/10.5194/bg-21-4099-2024, 2024
Short summary
Short summary
Drained peatlands cause high CO2 emissions. We assessed the effectiveness of subsurface water infiltration systems (WISs) in reducing CO2 emissions related to increases in water table depth (WTD) on 12 sites for up to 4 years. Results show WISs markedly reduced emissions by 2.1 t CO2-C ha-1 yr-1. The relationship between the amount of carbon above the WTD and CO2 emission was stronger than the relationship between WTD and emission. Long-term monitoring is crucial for accurate emission estimates.
Merit van den Berg, Thomas M. Gremmen, Renske J. E. Vroom, Jacobus van Huissteden, Jim Boonman, Corine J. A. van Huissteden, Ype van der Velde, Alfons J. P. Smolders, and Bas P. van de Riet
Biogeosciences, 21, 2669–2690, https://doi.org/10.5194/bg-21-2669-2024, https://doi.org/10.5194/bg-21-2669-2024, 2024
Short summary
Short summary
Drained peatlands emit 3 % of the global greenhouse gas emissions. Paludiculture is a way to reduce CO2 emissions while at the same time generating an income for landowners. The side effect is the potentially high methane emissions. We found very high methane emissions for broadleaf cattail compared with narrowleaf cattail and water fern. The rewetting was, however, effective to stop CO2 emissions for all species. The highest potential to reduce greenhouse gas emissions had narrowleaf cattail.
Alexa Marion Hinzman, Ylva Sjöberg, Steve W. Lyon, Wouter R. Berghuijs, and Ype van der Velde
EGUsphere, https://doi.org/10.5194/egusphere-2023-2391, https://doi.org/10.5194/egusphere-2023-2391, 2023
Preprint archived
Short summary
Short summary
An Arctic catchment with permafrost responds in a linear fashion: water in=water out. As permafrost thaws, 9 of 10 nested catchments become more non-linear over time. We find upstream catchments have stronger streamflow seasonality and exhibit the most nonlinear storage-discharge relationships. Downstream catchments have the greatest increases in non-linearity over time. These long-term shifts in the storage-discharge relationship are not typically seen in current hydrological models.
Karina von Schuckmann, Audrey Minière, Flora Gues, Francisco José Cuesta-Valero, Gottfried Kirchengast, Susheel Adusumilli, Fiammetta Straneo, Michaël Ablain, Richard P. Allan, Paul M. Barker, Hugo Beltrami, Alejandro Blazquez, Tim Boyer, Lijing Cheng, John Church, Damien Desbruyeres, Han Dolman, Catia M. Domingues, Almudena García-García, Donata Giglio, John E. Gilson, Maximilian Gorfer, Leopold Haimberger, Maria Z. Hakuba, Stefan Hendricks, Shigeki Hosoda, Gregory C. Johnson, Rachel Killick, Brian King, Nicolas Kolodziejczyk, Anton Korosov, Gerhard Krinner, Mikael Kuusela, Felix W. Landerer, Moritz Langer, Thomas Lavergne, Isobel Lawrence, Yuehua Li, John Lyman, Florence Marti, Ben Marzeion, Michael Mayer, Andrew H. MacDougall, Trevor McDougall, Didier Paolo Monselesan, Jan Nitzbon, Inès Otosaka, Jian Peng, Sarah Purkey, Dean Roemmich, Kanako Sato, Katsunari Sato, Abhishek Savita, Axel Schweiger, Andrew Shepherd, Sonia I. Seneviratne, Leon Simons, Donald A. Slater, Thomas Slater, Andrea K. Steiner, Toshio Suga, Tanguy Szekely, Wim Thiery, Mary-Louise Timmermans, Inne Vanderkelen, Susan E. Wjiffels, Tonghua Wu, and Michael Zemp
Earth Syst. Sci. Data, 15, 1675–1709, https://doi.org/10.5194/essd-15-1675-2023, https://doi.org/10.5194/essd-15-1675-2023, 2023
Short summary
Short summary
Earth's climate is out of energy balance, and this study quantifies how much heat has consequently accumulated over the past decades (ocean: 89 %, land: 6 %, cryosphere: 4 %, atmosphere: 1 %). Since 1971, this accumulated heat reached record values at an increasing pace. The Earth heat inventory provides a comprehensive view on the status and expectation of global warming, and we call for an implementation of this global climate indicator into the Paris Agreement’s Global Stocktake.
Cindy Quik, Ype van der Velde, Jasper H. J. Candel, Luc Steinbuch, Roy van Beek, and Jakob Wallinga
Biogeosciences, 20, 695–718, https://doi.org/10.5194/bg-20-695-2023, https://doi.org/10.5194/bg-20-695-2023, 2023
Short summary
Short summary
In NW Europe only parts of former peatlands remain. When these peatlands formed is not well known but relevant for questions on landscape, climate and archaeology. We investigated the age of Fochteloërveen, using radiocarbon dating and modelling. Results show that peat initiated at several sites 11 000–7000 years ago and expanded rapidly 5000 years ago. Our approach may ultimately be applied to model peat ages outside current remnants and provide a view of these lost landscapes.
Jim Boonman, Mariet M. Hefting, Corine J. A. van Huissteden, Merit van den Berg, Jacobus (Ko) van Huissteden, Gilles Erkens, Roel Melman, and Ype van der Velde
Biogeosciences, 19, 5707–5727, https://doi.org/10.5194/bg-19-5707-2022, https://doi.org/10.5194/bg-19-5707-2022, 2022
Short summary
Short summary
Draining peat causes high CO2 emissions, and rewetting could potentially help solve this problem. In the dry year 2020 we measured that subsurface irrigation reduced CO2 emissions by 28 % and 83 % on two research sites. We modelled a peat parcel and found that the reduction depends on seepage and weather conditions and increases when using pressurized irrigation or maintaining high ditchwater levels. We found that soil temperature and moisture are suitable as indicators of peat CO2 emissions.
Tanya Juliette Rebecca Lippmann, Monique Heijmans, Han Dolman, Ype van der Velde, Dimmie Hendriks, and Ko van Huissteden
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2022-143, https://doi.org/10.5194/gmd-2022-143, 2022
Preprint withdrawn
Short summary
Short summary
To assess the impact of vegetation on GHG fluxes in peatlands, we developed a new model, Peatland-VU-NUCOM (PVN). These results showed that plant communities impact GHG emissions, indicating that plant community re-establishment is a critical component of peatland restoration. This is the first time that a peatland emissions model investigated the role of re-introducing peat forming vegetation on GHG emissions.
Tiexi Chen, Renjie Guo, Qingyun Yan, Xin Chen, Shengjie Zhou, Chuanzhuang Liang, Xueqiong Wei, and Han Dolman
Biogeosciences, 19, 1515–1525, https://doi.org/10.5194/bg-19-1515-2022, https://doi.org/10.5194/bg-19-1515-2022, 2022
Short summary
Short summary
Currently people are very concerned about vegetation changes and their driving factors, including natural and anthropogenic drivers. In this study, a general browning trend is found in Syria during 2001–2018, indicated by the vegetation index. We found that land management caused by social unrest is the main cause of this browning phenomenon. The mechanism initially reported here highlights the importance of land management impacts at the regional scale.
Yousef Albuhaisi, Ype van der Velde, and Sander Houweling
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-55, https://doi.org/10.5194/bg-2022-55, 2022
Manuscript not accepted for further review
Short summary
Short summary
An important uncertainty in the modelling of methane emissions from natural wetlands is the wetland area. It is important to get the spatiotemporal covariance between the variables that drive methane emissions right for accurate quantification. Using high-resolution wetland and soil carbon maps, in combination with a simplified methane emission model that is coarsened in six steps from 0.005° to 1°, we find a strong relation between wetland emissions and the model resolution.
Anna-Maria Virkkala, Susan M. Natali, Brendan M. Rogers, Jennifer D. Watts, Kathleen Savage, Sara June Connon, Marguerite Mauritz, Edward A. G. Schuur, Darcy Peter, Christina Minions, Julia Nojeim, Roisin Commane, Craig A. Emmerton, Mathias Goeckede, Manuel Helbig, David Holl, Hiroki Iwata, Hideki Kobayashi, Pasi Kolari, Efrén López-Blanco, Maija E. Marushchak, Mikhail Mastepanov, Lutz Merbold, Frans-Jan W. Parmentier, Matthias Peichl, Torsten Sachs, Oliver Sonnentag, Masahito Ueyama, Carolina Voigt, Mika Aurela, Julia Boike, Gerardo Celis, Namyi Chae, Torben R. Christensen, M. Syndonia Bret-Harte, Sigrid Dengel, Han Dolman, Colin W. Edgar, Bo Elberling, Eugenie Euskirchen, Achim Grelle, Juha Hatakka, Elyn Humphreys, Järvi Järveoja, Ayumi Kotani, Lars Kutzbach, Tuomas Laurila, Annalea Lohila, Ivan Mammarella, Yojiro Matsuura, Gesa Meyer, Mats B. Nilsson, Steven F. Oberbauer, Sang-Jong Park, Roman Petrov, Anatoly S. Prokushkin, Christopher Schulze, Vincent L. St. Louis, Eeva-Stiina Tuittila, Juha-Pekka Tuovinen, William Quinton, Andrej Varlagin, Donatella Zona, and Viacheslav I. Zyryanov
Earth Syst. Sci. Data, 14, 179–208, https://doi.org/10.5194/essd-14-179-2022, https://doi.org/10.5194/essd-14-179-2022, 2022
Short summary
Short summary
The effects of climate warming on carbon cycling across the Arctic–boreal zone (ABZ) remain poorly understood due to the relatively limited distribution of ABZ flux sites. Fortunately, this flux network is constantly increasing, but new measurements are published in various platforms, making it challenging to understand the ABZ carbon cycle as a whole. Here, we compiled a new database of Arctic–boreal CO2 fluxes to help facilitate large-scale assessments of the ABZ carbon cycle.
Tanya J. R. Lippmann, Michiel H. in 't Zandt, Nathalie N. L. Van der Putten, Freek S. Busschers, Marc P. Hijma, Pieter van der Velden, Tim de Groot, Zicarlo van Aalderen, Ove H. Meisel, Caroline P. Slomp, Helge Niemann, Mike S. M. Jetten, Han A. J. Dolman, and Cornelia U. Welte
Biogeosciences, 18, 5491–5511, https://doi.org/10.5194/bg-18-5491-2021, https://doi.org/10.5194/bg-18-5491-2021, 2021
Short summary
Short summary
This paper is a step towards understanding the basal peat ecosystem beneath the North Sea. Plant remains followed parallel sequences. Methane concentrations were low with local exceptions, with the source likely being trapped pockets of millennia-old methane. Microbial community structure indicated the absence of a biofilter and was diverse across sites. Large carbon stores in the presence of methanogens and in the absence of methanotrophs have the potential to be metabolized into methane.
Kyle B. Delwiche, Sara Helen Knox, Avni Malhotra, Etienne Fluet-Chouinard, Gavin McNicol, Sarah Feron, Zutao Ouyang, Dario Papale, Carlo Trotta, Eleonora Canfora, You-Wei Cheah, Danielle Christianson, Ma. Carmelita R. Alberto, Pavel Alekseychik, Mika Aurela, Dennis Baldocchi, Sheel Bansal, David P. Billesbach, Gil Bohrer, Rosvel Bracho, Nina Buchmann, David I. Campbell, Gerardo Celis, Jiquan Chen, Weinan Chen, Housen Chu, Higo J. Dalmagro, Sigrid Dengel, Ankur R. Desai, Matteo Detto, Han Dolman, Elke Eichelmann, Eugenie Euskirchen, Daniela Famulari, Kathrin Fuchs, Mathias Goeckede, Sébastien Gogo, Mangaliso J. Gondwe, Jordan P. Goodrich, Pia Gottschalk, Scott L. Graham, Martin Heimann, Manuel Helbig, Carole Helfter, Kyle S. Hemes, Takashi Hirano, David Hollinger, Lukas Hörtnagl, Hiroki Iwata, Adrien Jacotot, Gerald Jurasinski, Minseok Kang, Kuno Kasak, John King, Janina Klatt, Franziska Koebsch, Ken W. Krauss, Derrick Y. F. Lai, Annalea Lohila, Ivan Mammarella, Luca Belelli Marchesini, Giovanni Manca, Jaclyn Hatala Matthes, Trofim Maximov, Lutz Merbold, Bhaskar Mitra, Timothy H. Morin, Eiko Nemitz, Mats B. Nilsson, Shuli Niu, Walter C. Oechel, Patricia Y. Oikawa, Keisuke Ono, Matthias Peichl, Olli Peltola, Michele L. Reba, Andrew D. Richardson, William Riley, Benjamin R. K. Runkle, Youngryel Ryu, Torsten Sachs, Ayaka Sakabe, Camilo Rey Sanchez, Edward A. Schuur, Karina V. R. Schäfer, Oliver Sonnentag, Jed P. Sparks, Ellen Stuart-Haëntjens, Cove Sturtevant, Ryan C. Sullivan, Daphne J. Szutu, Jonathan E. Thom, Margaret S. Torn, Eeva-Stiina Tuittila, Jessica Turner, Masahito Ueyama, Alex C. Valach, Rodrigo Vargas, Andrej Varlagin, Alma Vazquez-Lule, Joseph G. Verfaillie, Timo Vesala, George L. Vourlitis, Eric J. Ward, Christian Wille, Georg Wohlfahrt, Guan Xhuan Wong, Zhen Zhang, Donatella Zona, Lisamarie Windham-Myers, Benjamin Poulter, and Robert B. Jackson
Earth Syst. Sci. Data, 13, 3607–3689, https://doi.org/10.5194/essd-13-3607-2021, https://doi.org/10.5194/essd-13-3607-2021, 2021
Short summary
Short summary
Methane is an important greenhouse gas, yet we lack knowledge about its global emissions and drivers. We present FLUXNET-CH4, a new global collection of methane measurements and a critical resource for the research community. We use FLUXNET-CH4 data to quantify the seasonality of methane emissions from freshwater wetlands, finding that methane seasonality varies strongly with latitude. Our new database and analysis will improve wetland model accuracy and inform greenhouse gas budgets.
Thomas Janssen, Ype van der Velde, Florian Hofhansl, Sebastiaan Luyssaert, Kim Naudts, Bart Driessen, Katrin Fleischer, and Han Dolman
Biogeosciences, 18, 4445–4472, https://doi.org/10.5194/bg-18-4445-2021, https://doi.org/10.5194/bg-18-4445-2021, 2021
Short summary
Short summary
Satellite images show that the Amazon forest has greened up during past droughts. Measurements of tree stem growth and leaf litterfall upscaled using machine-learning algorithms show that leaf flushing at the onset of a drought results in canopy rejuvenation and green-up during drought while simultaneously trees excessively shed older leaves and tree stem growth declines. Canopy green-up during drought therefore does not necessarily point to enhanced tree growth and improved forest health.
Vince P. Kaandorp, Hans Peter Broers, Ype van der Velde, Joachim Rozemeijer, and Perry G. B. de Louw
Hydrol. Earth Syst. Sci., 25, 3691–3711, https://doi.org/10.5194/hess-25-3691-2021, https://doi.org/10.5194/hess-25-3691-2021, 2021
Short summary
Short summary
We reconstructed historical and present-day tritium, chloride, and nitrate concentrations in stream water of a catchment using
land-use-based input curves and calculated travel times of groundwater. Parameters such as the unsaturated zone thickness, mean travel time, and input patterns determine time lags between inputs and in-stream concentrations. The timescale of the breakthrough of pollutants in streams is dependent on the location of pollution in a catchment.
Ana Maria Roxana Petrescu, Chunjing Qiu, Philippe Ciais, Rona L. Thompson, Philippe Peylin, Matthew J. McGrath, Efisio Solazzo, Greet Janssens-Maenhout, Francesco N. Tubiello, Peter Bergamaschi, Dominik Brunner, Glen P. Peters, Lena Höglund-Isaksson, Pierre Regnier, Ronny Lauerwald, David Bastviken, Aki Tsuruta, Wilfried Winiwarter, Prabir K. Patra, Matthias Kuhnert, Gabriel D. Oreggioni, Monica Crippa, Marielle Saunois, Lucia Perugini, Tiina Markkanen, Tuula Aalto, Christine D. Groot Zwaaftink, Hanqin Tian, Yuanzhi Yao, Chris Wilson, Giulia Conchedda, Dirk Günther, Adrian Leip, Pete Smith, Jean-Matthieu Haussaire, Antti Leppänen, Alistair J. Manning, Joe McNorton, Patrick Brockmann, and Albertus Johannes Dolman
Earth Syst. Sci. Data, 13, 2307–2362, https://doi.org/10.5194/essd-13-2307-2021, https://doi.org/10.5194/essd-13-2307-2021, 2021
Short summary
Short summary
This study is topical and provides a state-of-the-art scientific overview of data availability from bottom-up and top-down CH4 and N2O emissions in the EU27 and UK. The data integrate recent emission inventories with process-based model data and regional/global inversions for the European domain, aiming at reconciling them with official country-level UNFCCC national GHG inventories in support to policy and to facilitate real-time verification procedures.
Ana Maria Roxana Petrescu, Matthew J. McGrath, Robbie M. Andrew, Philippe Peylin, Glen P. Peters, Philippe Ciais, Gregoire Broquet, Francesco N. Tubiello, Christoph Gerbig, Julia Pongratz, Greet Janssens-Maenhout, Giacomo Grassi, Gert-Jan Nabuurs, Pierre Regnier, Ronny Lauerwald, Matthias Kuhnert, Juraj Balkovič, Mart-Jan Schelhaas, Hugo A. C. Denier van der
Gon, Efisio Solazzo, Chunjing Qiu, Roberto Pilli, Igor B. Konovalov, Richard A. Houghton, Dirk Günther, Lucia Perugini, Monica Crippa, Raphael Ganzenmüller, Ingrid T. Luijkx, Pete Smith, Saqr Munassar, Rona L. Thompson, Giulia Conchedda, Guillaume Monteil, Marko Scholze, Ute Karstens, Patrick Brockmann, and Albertus Johannes Dolman
Earth Syst. Sci. Data, 13, 2363–2406, https://doi.org/10.5194/essd-13-2363-2021, https://doi.org/10.5194/essd-13-2363-2021, 2021
Short summary
Short summary
This study is topical and provides a state-of-the-art scientific overview of data availability from bottom-up and top-down CO2 fossil emissions and CO2 land fluxes in the EU27+UK. The data integrate recent emission inventories with ecosystem data, land carbon models and regional/global inversions for the European domain, aiming at reconciling CO2 estimates with official country-level UNFCCC national GHG inventories in support to policy and facilitating real-time verification procedures.
Ove H. Meisel, Joshua F. Dean, Jorien E. Vonk, Lukas Wacker, Gert-Jan Reichart, and Han Dolman
Biogeosciences, 18, 2241–2258, https://doi.org/10.5194/bg-18-2241-2021, https://doi.org/10.5194/bg-18-2241-2021, 2021
Short summary
Short summary
Arctic permafrost lakes form thaw bulbs of unfrozen soil (taliks) beneath them where carbon degradation and greenhouse gas production are increased. We analyzed the stable carbon isotopes of Alaskan talik sediments and their porewater dissolved organic carbon and found that the top layers of these taliks are likely more actively degraded than the deeper layers. This in turn implies that these top layers are likely also more potent greenhouse gas producers than the underlying deeper layers.
Rogier van der Velde, Andreas Colliander, Michiel Pezij, Harm-Jan F. Benninga, Rajat Bindlish, Steven K. Chan, Thomas J. Jackson, Dimmie M. D. Hendriks, Denie C. M. Augustijn, and Zhongbo Su
Hydrol. Earth Syst. Sci., 25, 473–495, https://doi.org/10.5194/hess-25-473-2021, https://doi.org/10.5194/hess-25-473-2021, 2021
Short summary
Short summary
NASA’s SMAP satellite provides estimates of the amount of water in the soil. With measurements from a network of 20 monitoring stations, the accuracy of these estimates has been studied for a 4-year period. We found an agreement between satellite and in situ estimates in line with the mission requirements once the large mismatches associated with rapidly changing water contents, e.g. soil freezing and rainfall, are excluded.
Liang Yu, Joachim C. Rozemeijer, Hans Peter Broers, Boris M. van Breukelen, Jack J. Middelburg, Maarten Ouboter, and Ype van der Velde
Hydrol. Earth Syst. Sci., 25, 69–87, https://doi.org/10.5194/hess-25-69-2021, https://doi.org/10.5194/hess-25-69-2021, 2021
Short summary
Short summary
The assessment of the collected water quality information is for the managers to find a way to improve the water environment to satisfy human uses and environmental needs. We found groundwater containing high concentrations of nutrient mixes with rain water in the ditches. The stable solutes are diluted during rain. The change in nutrients over time is determined by and uptaken by organisms and chemical processes. The water is more enriched with nutrients and looked
dirtierduring winter.
Maitane Iturrate-Garcia, Monique M. P. D. Heijmans, J. Hans C. Cornelissen, Fritz H. Schweingruber, Pascal A. Niklaus, and Gabriela Schaepman-Strub
Biogeosciences, 17, 4981–4998, https://doi.org/10.5194/bg-17-4981-2020, https://doi.org/10.5194/bg-17-4981-2020, 2020
Short summary
Short summary
Changes on plant traits associated with climate warming might alter vegetation–climate interactions. We investigated experimentally the effects of enhanced permafrost thaw and soil nutrients on a wide set of tundra shrub traits. We found a coordinated trait response to some treatments, which suggests a shift in shrub resource, growth and defence strategies. This shift might feed back into permafrost thaw – through mechanisms associated with water demand – and into carbon and energy fluxes.
Srijana Lama, Sander Houweling, K. Folkert Boersma, Henk Eskes, Ilse Aben, Hugo A. C. Denier van der Gon, Maarten C. Krol, Han Dolman, Tobias Borsdorff, and Alba Lorente
Atmos. Chem. Phys., 20, 10295–10310, https://doi.org/10.5194/acp-20-10295-2020, https://doi.org/10.5194/acp-20-10295-2020, 2020
Short summary
Short summary
Rapid urbanization has increased the consumption of fossil fuel, contributing the degradation of urban air quality. Burning efficiency is a major factor determining the impact of fuel burning on the environment. We quantify the burning efficiency of fossil fuel use over six megacities using satellite remote sensing data. City governance can use these results to understand air pollution scenarios and to formulate effective air pollution control strategies.
Thomas Janssen, Katrin Fleischer, Sebastiaan Luyssaert, Kim Naudts, and Han Dolman
Biogeosciences, 17, 2621–2645, https://doi.org/10.5194/bg-17-2621-2020, https://doi.org/10.5194/bg-17-2621-2020, 2020
Short summary
Short summary
The frequency and severity of droughts are expected to increase in the tropics, impacting the functioning of tropical forests. Here, we synthesized observed responses to drought in Neotropical forests. We find that, during drought, trees generally close their leaf stomata, resulting in reductions in photosynthesis, growth and transpiration. However, on the ecosystem scale, these responses are not visible. This indicates that resistance to drought increases from the leaf to ecosystem scale.
Ana Maria Roxana Petrescu, Glen P. Peters, Greet Janssens-Maenhout, Philippe Ciais, Francesco N. Tubiello, Giacomo Grassi, Gert-Jan Nabuurs, Adrian Leip, Gema Carmona-Garcia, Wilfried Winiwarter, Lena Höglund-Isaksson, Dirk Günther, Efisio Solazzo, Anja Kiesow, Ana Bastos, Julia Pongratz, Julia E. M. S. Nabel, Giulia Conchedda, Roberto Pilli, Robbie M. Andrew, Mart-Jan Schelhaas, and Albertus J. Dolman
Earth Syst. Sci. Data, 12, 961–1001, https://doi.org/10.5194/essd-12-961-2020, https://doi.org/10.5194/essd-12-961-2020, 2020
Short summary
Short summary
This study is topical and provides a state-of-the-art scientific overview of data availability from bottom-up GHG anthropogenic emissions from agriculture, forestry and other land use (AFOLU) in the EU28. The data integrate recent AFOLU emission inventories with ecosystem data and land carbon models, aiming at reconciling GHG budgets with official country-level UNFCCC inventories. We provide comprehensive emission assessments in support to policy, facilitating real-time verification procedures.
Olli Peltola, Timo Vesala, Yao Gao, Olle Räty, Pavel Alekseychik, Mika Aurela, Bogdan Chojnicki, Ankur R. Desai, Albertus J. Dolman, Eugenie S. Euskirchen, Thomas Friborg, Mathias Göckede, Manuel Helbig, Elyn Humphreys, Robert B. Jackson, Georg Jocher, Fortunat Joos, Janina Klatt, Sara H. Knox, Natalia Kowalska, Lars Kutzbach, Sebastian Lienert, Annalea Lohila, Ivan Mammarella, Daniel F. Nadeau, Mats B. Nilsson, Walter C. Oechel, Matthias Peichl, Thomas Pypker, William Quinton, Janne Rinne, Torsten Sachs, Mateusz Samson, Hans Peter Schmid, Oliver Sonnentag, Christian Wille, Donatella Zona, and Tuula Aalto
Earth Syst. Sci. Data, 11, 1263–1289, https://doi.org/10.5194/essd-11-1263-2019, https://doi.org/10.5194/essd-11-1263-2019, 2019
Short summary
Short summary
Here we develop a monthly gridded dataset of northern (> 45 N) wetland methane (CH4) emissions. The data product is derived using a random forest machine-learning technique and eddy covariance CH4 fluxes from 25 wetland sites. Annual CH4 emissions from these wetlands calculated from the derived data product are comparable to prior studies focusing on these areas. This product is an independent estimate of northern wetland CH4 emissions and hence could be used, e.g. for process model evaluation.
Martijn Westhoff, Axel Kleidon, Stan Schymanski, Benjamin Dewals, Femke Nijsse, Maik Renner, Henk Dijkstra, Hisashi Ozawa, Hubert Savenije, Han Dolman, Antoon Meesters, and Erwin Zehe
Earth Syst. Dynam. Discuss., https://doi.org/10.5194/esd-2019-6, https://doi.org/10.5194/esd-2019-6, 2019
Publication in ESD not foreseen
Short summary
Short summary
Even models relying on physical laws have parameters that need to be measured or estimated. Thermodynamic optimality principles potentially offer a way to reduce the number of estimated parameters by stating that a system evolves to an optimum state. These principles have been applied successfully within the Earth system, but it is often unclear what to optimize and how. In this review paper we identify commonalities between different successful applications as well as some doubtful applications.
Joshua F. Dean, Jurgen R. van Hal, A. Johannes Dolman, Rien Aerts, and James T. Weedon
Biogeosciences, 15, 7141–7154, https://doi.org/10.5194/bg-15-7141-2018, https://doi.org/10.5194/bg-15-7141-2018, 2018
Short summary
Short summary
Lakes, rivers, ponds and streams are significant contributors of the greenhouse gas carbon dioxide to the atmosphere. This is partly due to the decomposition of plant and soil organic matter transported through these aquatic systems by microbial communities. In determining how vulnerable this organic material is to decomposition during aquatic transport, we show that standardized treatments in experiments can affect the way microbial communities behave and potentially the experimental outcome.
Joachim Rozemeijer, Janneke Klein, Dimmie Hendriks, Wiebe Borren, Maarten Ouboter, and Winnie Rip
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2017-636, https://doi.org/10.5194/hess-2017-636, 2018
Revised manuscript not accepted
Short summary
Short summary
In lowland deltas surface water levels are often tightly controlled by inlet of diverted river water during dry periods and discharge via large-scale pumping stations during wet periods. The objective of this study was to assess the effects of changing the water level management from a fixed level to a flexible regime for 10 study catchments in The Netherlands. Water quality risks appeared and our methods could prevent such effects in the growing number of regulated catchments worldwide.
Fernando Jaramillo, Neil Cory, Berit Arheimer, Hjalmar Laudon, Ype van der Velde, Thomas B. Hasper, Claudia Teutschbein, and Johan Uddling
Hydrol. Earth Syst. Sci., 22, 567–580, https://doi.org/10.5194/hess-22-567-2018, https://doi.org/10.5194/hess-22-567-2018, 2018
Short summary
Short summary
Which is the dominant effect on evapotranspiration in northern forests, an increase by recent forests expansion or a decrease by the water use response due to increasing CO2 concentrations? We determined the dominant effect during the period 1961–2012 in 65 Swedish basins. We used the Budyko framework to study the hydroclimatic movements in Budyko space. Our findings suggest that forest expansion is the dominant driver of long-term and large-scale evapotranspiration changes.
Stefanie R. Lutz, Ype van der Velde, Omniea F. Elsayed, Gwenaël Imfeld, Marie Lefrancq, Sylvain Payraudeau, and Boris M. van Breukelen
Hydrol. Earth Syst. Sci., 21, 5243–5261, https://doi.org/10.5194/hess-21-5243-2017, https://doi.org/10.5194/hess-21-5243-2017, 2017
Short summary
Short summary
This study presents concentration and carbon isotope data of two herbicides from a small agricultural catchment. Herbicide concentrations at the catchment outlet were highest after intense rainfall events. The isotope data indicated herbicide degradation within 2 months after application. The system was modelled with a conceptual mathematical model using the transport formulation by travel-time distributions, which allowed testing of various assumptions of pesticide transport and degradation.
Henk-Jan van der Kolk, Monique M. P. D. Heijmans, Jacobus van Huissteden, Jeroen W. M. Pullens, and Frank Berendse
Biogeosciences, 13, 6229–6245, https://doi.org/10.5194/bg-13-6229-2016, https://doi.org/10.5194/bg-13-6229-2016, 2016
Short summary
Short summary
Changes in tundra vegetation structure may amplify Arctic climate warming. Our simulations with a new tundra vegetation model suggest that precipitation increases favour grass abundance, whereas warming favours shrub dominance. However, abrupt permafrost thaw initiating wetland formation leads to grass dominance. Our simulations show that a wetter tundra, due to increased precipitation or abrupt permafrost thaw, could result in local shrub decline instead of the widely expected shrub expansion.
Inge Juszak, Werner Eugster, Monique M. P. D. Heijmans, and Gabriela Schaepman-Strub
Biogeosciences, 13, 4049–4064, https://doi.org/10.5194/bg-13-4049-2016, https://doi.org/10.5194/bg-13-4049-2016, 2016
Short summary
Short summary
Changes in Arctic vegetation composition and structure feed back to climate and permafrost. Using field observations at a Siberian tundra site, we find that dwarf shrubs absorb more solar radiation than wet sedges and thus amplify surface warming, especially during snow melt. On the other hand, permafrost thaw was enhanced below sedges as a consequence of high soil moisture. Standing dead sedge leaves affected the radiation budget strongly and deserve more scientific attention.
Patrick W. Bogaart, Ype van der Velde, Steve W. Lyon, and Stefan C. Dekker
Hydrol. Earth Syst. Sci., 20, 1413–1432, https://doi.org/10.5194/hess-20-1413-2016, https://doi.org/10.5194/hess-20-1413-2016, 2016
Short summary
Short summary
We analyse how stream discharge declines after rain storms. This "recession" behaviour contains information about the capacity of the catchment to hold or release water. Looking at many rivers in Sweden, we were able to link distinct recession regimes to land use and catchment characteristics. Trends in recession behaviour are found to correspond to intensifying agriculture and extensive reforestation. We conclude that both humans and nature reorganizes the soil in order to enhance efficiency.
D. G. Miralles, C. Jiménez, M. Jung, D. Michel, A. Ershadi, M. F. McCabe, M. Hirschi, B. Martens, A. J. Dolman, J. B. Fisher, Q. Mu, S. I. Seneviratne, E. F. Wood, and D. Fernández-Prieto
Hydrol. Earth Syst. Sci., 20, 823–842, https://doi.org/10.5194/hess-20-823-2016, https://doi.org/10.5194/hess-20-823-2016, 2016
Short summary
Short summary
The WACMOS-ET project aims to advance the development of land evaporation estimates on global and regional scales. Evaluation of current evaporation data sets on the global scale showed that they manifest large dissimilarities during conditions of water stress and drought and deficiencies in the way evaporation is partitioned into several components. Different models perform better under different conditions, highlighting the potential for considering biome- or climate-specific model ensembles.
J. C. Rozemeijer, A. Visser, W. Borren, M. Winegram, Y. van der Velde, J. Klein, and H. P. Broers
Hydrol. Earth Syst. Sci., 20, 347–358, https://doi.org/10.5194/hess-20-347-2016, https://doi.org/10.5194/hess-20-347-2016, 2016
Short summary
Short summary
Controlled drainage has been recognized as an effective option to optimize soil moisture conditions for agriculture and to reduce unnecessary losses of fresh water and nutrients. For a grassland field in the Netherlands, we measured the changes in the field water and solute balance after introducing controlled drainage. We concluded that controlled drainage reduced the drain discharge and increased the groundwater storage in the field, but did not have clear positive effects for water quality.
G. Martins, C. von Randow, G. Sampaio, and A. J. Dolman
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hessd-12-671-2015, https://doi.org/10.5194/hessd-12-671-2015, 2015
Revised manuscript not accepted
Short summary
Short summary
Studies on numerical modeling in Amazonia show that the models fail to capture important aspects of climate variability in this region and it is important to understand the reasons that cause this drawback. We study how the general circulation models of the CMIP5 simulate the inter-relations between regional precipitation, moisture convergence and SST in the adjacent oceans, to assess how flaws in the representation of these processes can translate into biases in simulated rainfall in Amazonia.
B. J. Dermody, R. P. H. van Beek, E. Meeks, K. Klein Goldewijk, W. Scheidel, Y. van der Velde, M. F. P. Bierkens, M. J. Wassen, and S. C. Dekker
Hydrol. Earth Syst. Sci., 18, 5025–5040, https://doi.org/10.5194/hess-18-5025-2014, https://doi.org/10.5194/hess-18-5025-2014, 2014
Short summary
Short summary
Our virtual water network of the Roman World shows that virtual water trade and irrigation provided the Romans with resilience to interannual climate variability. Virtual water trade enabled the Romans to meet food demands from regions with a surplus. Irrigation provided stable water supplies for agriculture, particularly in large river catchments. However, virtual water trade also stimulated urbanization and population growth, which eroded Roman resilience to climate variability over time.
B. van der Grift, J. C. Rozemeijer, J. Griffioen, and Y. van der Velde
Hydrol. Earth Syst. Sci., 18, 4687–4702, https://doi.org/10.5194/hess-18-4687-2014, https://doi.org/10.5194/hess-18-4687-2014, 2014
Short summary
Short summary
Exfiltration of anoxic groundwater containing Fe(II) to surface water is an important mechanism controlling P speciation in the lowland catchments. Due to changes in pH and temperature, the Fe(II) oxidation rates were much lower in winter than in summer. This study also shows a fast transformation of dissolved P to structural P during the initial stage of the Fe oxidation process resulting in low dissolved P concentrations in the surface water throughout the year.
G. R. van der Werf and A. J. Dolman
Earth Syst. Dynam., 5, 375–382, https://doi.org/10.5194/esd-5-375-2014, https://doi.org/10.5194/esd-5-375-2014, 2014
Short summary
Short summary
Climate sensitivity can be quantified using measured changes in temperature and forcings. This approach requires disentangling natural and anthropogenic influences on global climate. We focused on the role of the Atlantic Multidecadal Oscillation (AMO) in this and show how different AMO characterizations influence the anthropogenic temperature trends (we found they were in between previously published values) and transient climate sensitivity, which we found to be 1.6 (1.0-3.3)°C.
A. Budishchev, Y. Mi, J. van Huissteden, L. Belelli-Marchesini, G. Schaepman-Strub, F. J. W. Parmentier, G. Fratini, A. Gallagher, T. C. Maximov, and A. J. Dolman
Biogeosciences, 11, 4651–4664, https://doi.org/10.5194/bg-11-4651-2014, https://doi.org/10.5194/bg-11-4651-2014, 2014
A. P. Schrier-Uijl, P. S. Kroon, D. M. D. Hendriks, A. Hensen, J. Van Huissteden, F. Berendse, and E. M. Veenendaal
Biogeosciences, 11, 4559–4576, https://doi.org/10.5194/bg-11-4559-2014, https://doi.org/10.5194/bg-11-4559-2014, 2014
Y. Mi, J. van Huissteden, F. J. W. Parmentier, A. Gallagher, A. Budishchev, C. T. Berridge, and A. J. Dolman
Biogeosciences, 11, 3985–3999, https://doi.org/10.5194/bg-11-3985-2014, https://doi.org/10.5194/bg-11-3985-2014, 2014
T. Chen, G. R. van der Werf, N. Gobron, E. J. Moors, and A. J. Dolman
Biogeosciences, 11, 3871–3880, https://doi.org/10.5194/bg-11-3871-2014, https://doi.org/10.5194/bg-11-3871-2014, 2014
Y. Mi, J. van Huissteden, and A. J. Dolman
The Cryosphere Discuss., https://doi.org/10.5194/tcd-8-3603-2014, https://doi.org/10.5194/tcd-8-3603-2014, 2014
Revised manuscript not accepted
P. Ciais, A. J. Dolman, A. Bombelli, R. Duren, A. Peregon, P. J. Rayner, C. Miller, N. Gobron, G. Kinderman, G. Marland, N. Gruber, F. Chevallier, R. J. Andres, G. Balsamo, L. Bopp, F.-M. Bréon, G. Broquet, R. Dargaville, T. J. Battin, A. Borges, H. Bovensmann, M. Buchwitz, J. Butler, J. G. Canadell, R. B. Cook, R. DeFries, R. Engelen, K. R. Gurney, C. Heinze, M. Heimann, A. Held, M. Henry, B. Law, S. Luyssaert, J. Miller, T. Moriyama, C. Moulin, R. B. Myneni, C. Nussli, M. Obersteiner, D. Ojima, Y. Pan, J.-D. Paris, S. L. Piao, B. Poulter, S. Plummer, S. Quegan, P. Raymond, M. Reichstein, L. Rivier, C. Sabine, D. Schimel, O. Tarasova, R. Valentini, R. Wang, G. van der Werf, D. Wickland, M. Williams, and C. Zehner
Biogeosciences, 11, 3547–3602, https://doi.org/10.5194/bg-11-3547-2014, https://doi.org/10.5194/bg-11-3547-2014, 2014
M. Van Damme, L. Clarisse, C. L. Heald, D. Hurtmans, Y. Ngadi, C. Clerbaux, A. J. Dolman, J. W. Erisman, and P. F. Coheur
Atmos. Chem. Phys., 14, 2905–2922, https://doi.org/10.5194/acp-14-2905-2014, https://doi.org/10.5194/acp-14-2905-2014, 2014
C. T. Berridge, L. H. Hadju, and A. J. Dolman
Biogeosciences Discuss., https://doi.org/10.5194/bgd-11-1977-2014, https://doi.org/10.5194/bgd-11-1977-2014, 2014
Revised manuscript not accepted
T. Chen, G. R. Werf, R. A. M. Jeu, G. Wang, and A. J. Dolman
Hydrol. Earth Syst. Sci., 17, 3885–3894, https://doi.org/10.5194/hess-17-3885-2013, https://doi.org/10.5194/hess-17-3885-2013, 2013
B. Ringeval, P. O. Hopcroft, P. J. Valdes, P. Ciais, G. Ramstein, A. J. Dolman, and M. Kageyama
Clim. Past, 9, 149–171, https://doi.org/10.5194/cp-9-149-2013, https://doi.org/10.5194/cp-9-149-2013, 2013
Related subject area
Biogeosciences
DeepPhenoMem V1.0: deep learning modelling of canopy greenness dynamics accounting for multi-variate meteorological memory effects on vegetation phenology
Impacts of land-use change on biospheric carbon: an oriented benchmark using the ORCHIDEE land surface model
Implementing the iCORAL (version 1.0) coral reef CaCO3 production module in the iLOVECLIM climate model
Assimilation of carbonyl sulfide (COS) fluxes within the adjoint-based data assimilation system – Nanjing University Carbon Assimilation System (NUCAS v1.0)
Quantifying the role of ozone-caused damage to vegetation in the Earth system: a new parameterization scheme for photosynthetic and stomatal responses
Radiocarbon analysis reveals underestimation of soil organic carbon persistence in new-generation soil models
Exploring the potential of history matching for land surface model calibration
EAT v1.0.0: a 1D test bed for physical–biogeochemical data assimilation in natural waters
Using deep learning to integrate paleoclimate and global biogeochemistry over the Phanerozoic Eon
Modelling boreal forest's mineral soil and peat C dynamics with the Yasso07 model coupled with the Ricker moisture modifier
Dynamic ecosystem assembly and escaping the “fire trap” in the tropics: insights from FATES_15.0.0
In silico calculation of soil pH by SCEPTER v1.0
Learning from conceptual models – a study of emergence of cooperation towards resource protection in a social-ecological system
Simple process-led algorithms for simulating habitats (SPLASH v.2.0): robust calculations of water and energy fluxes
A global behavioural model of human fire use and management: WHAM! v1.0
Terrestrial Ecosystem Model in R (TEMIR) version 1.0: simulating ecophysiological responses of vegetation to atmospheric chemical and meteorological changes
BOATSv2: New ecological and economic features improve simulations of High Seas catch and effort
Lambda-PFLOTRAN 1.0: Workflow for Incorporating Organic Matter Chemistry Informed by Ultra High Resolution Mass Spectrometry into Biogeochemical Modeling
biospheremetrics v1.0.2: an R package to calculate two complementary terrestrial biosphere integrity indicators – human colonization of the biosphere (BioCol) and risk of ecosystem destabilization (EcoRisk)
Modeling boreal forest soil dynamics with the microbially explicit soil model MIMICS+ (v1.0)
Biogeochemical model Biome-BGCMuSo v6.2 provides plausible and accurate simulations of carbon cycle in Central European beech forests
Optimal enzyme allocation leads to the constrained enzyme hypothesis: the Soil Enzyme Steady Allocation Model (SESAM; v3.1)
Implementing a dynamic representation of fire and harvest including subgrid-scale heterogeneity in the tile-based land surface model CLASSIC v1.45
Inferring the tree regeneration niche from inventory data using a dynamic forest model
A dynamical process-based model AMmonia–CLIMate v1.0 (AMCLIM v1.0) for quantifying global agricultural ammonia emissions – Part 1: Land module for simulating emissions from synthetic fertilizer use
Optimising CH4 simulations from the LPJ-GUESS model v4.1 using an adaptive Markov chain Monte Carlo algorithm
Biological nitrogen fixation of natural and agricultural vegetation simulated with LPJmL 5.7.9
The XSO framework (v0.1) and Phydra library (v0.1) for a flexible, reproducible, and integrated plankton community modeling environment in Python
AgriCarbon-EO v1.0.1: large-scale and high-resolution simulation of carbon fluxes by assimilation of Sentinel-2 and Landsat-8 reflectances using a Bayesian approach
SAMM version 1.0: a numerical model for microbial- mediated soil aggregate formation
A model of the within-population variability of budburst in forest trees
Computationally efficient parameter estimation for high-dimensional ocean biogeochemical models
The community-centered freshwater biogeochemistry model unified RIVE v1.0: a unified version for water column
Observation-based sowing dates and cultivars significantly affect yield and irrigation for some crops in the Community Land Model (CLM5)
The statistical emulators of GGCMI phase 2: responses of year-to-year variation of crop yield to CO2, temperature, water, and nitrogen perturbations
A novel Eulerian model based on central moments to simulate age and reactivity continua interacting with mixing processes
AdaScape 1.0: a coupled modelling tool to investigate the links between tectonics, climate, and biodiversity
An along-track Biogeochemical Argo modelling framework: a case study of model improvements for the Nordic seas
Quantification of hydraulic trait control on plant hydrodynamics and risk of hydraulic failure within a demographic structured vegetation model in a tropical forest (FATES–HYDRO V1.0)
SedTrace 1.0: a Julia-based framework for generating and running reactive-transport models of marine sediment diagenesis specializing in trace elements and isotopes
A high-resolution marine mercury model MITgcm-ECCO2-Hg with online biogeochemistry
Improving nitrogen cycling in a land surface model (CLM5) to quantify soil N2O, NO, and NH3 emissions from enhanced rock weathering with croplands
Ocean biogeochemistry in the coupled ocean–sea ice–biogeochemistry model FESOM2.1–REcoM3
Forcing the Global Fire Emissions Database burned-area dataset into the Community Land Model version 5.0: impacts on carbon and water fluxes at high latitudes
Modeling of non-structural carbohydrate dynamics by the spatially explicit individual-based dynamic global vegetation model SEIB-DGVM (SEIB-DGVM-NSC version 1.0)
Simulating Bark Beetle Outbreak Dynamics and their Influence on Carbon Balance Estimates with ORCHIDEE r7791
MEDFATE 2.9.3: a trait-enabled model to simulate Mediterranean forest function and dynamics at regional scales
Modelling the role of livestock grazing in C and N cycling in grasslands with LPJmL5.0-grazing
Implementation of trait-based ozone plant sensitivity in the Yale Interactive terrestrial Biosphere model v1.0 to assess global vegetation damage
The Permafrost and Organic LayEr module for Forest Models (POLE-FM) 1.0
Guohua Liu, Mirco Migliavacca, Christian Reimers, Basil Kraft, Markus Reichstein, Andrew D. Richardson, Lisa Wingate, Nicolas Delpierre, Hui Yang, and Alexander J. Winkler
Geosci. Model Dev., 17, 6683–6701, https://doi.org/10.5194/gmd-17-6683-2024, https://doi.org/10.5194/gmd-17-6683-2024, 2024
Short summary
Short summary
Our study employs long short-term memory (LSTM) networks to model canopy greenness and phenology, integrating meteorological memory effects. The LSTM model outperforms traditional methods, enhancing accuracy in predicting greenness dynamics and phenological transitions across plant functional types. Highlighting the importance of multi-variate meteorological memory effects, our research pioneers unlock the secrets of vegetation phenology responses to climate change with deep learning techniques.
Thi Lan Anh Dinh, Daniel Goll, Philippe Ciais, and Ronny Lauerwald
Geosci. Model Dev., 17, 6725–6744, https://doi.org/10.5194/gmd-17-6725-2024, https://doi.org/10.5194/gmd-17-6725-2024, 2024
Short summary
Short summary
The study assesses the performance of the dynamic global vegetation model (DGVM) ORCHIDEE in capturing the impact of land-use change on carbon stocks across Europe. Comparisons with observations reveal that the model accurately represents carbon fluxes and stocks. Despite the underestimations in certain land-use conversions, the model describes general trends in soil carbon response to land-use change, aligning with the site observations.
Nathaelle Bouttes, Lester Kwiatkowski, Manon Berger, Victor Brovkin, and Guy Munhoven
Geosci. Model Dev., 17, 6513–6528, https://doi.org/10.5194/gmd-17-6513-2024, https://doi.org/10.5194/gmd-17-6513-2024, 2024
Short summary
Short summary
Coral reefs are crucial for biodiversity, but they also play a role in the carbon cycle on long time scales of a few thousand years. To better simulate the future and past evolution of coral reefs and their effect on the global carbon cycle, hence on atmospheric CO2 concentration, it is necessary to include coral reefs within a climate model. Here we describe the inclusion of coral reef carbonate production in a carbon–climate model and its validation in comparison to existing modern data.
Huajie Zhu, Mousong Wu, Fei Jiang, Michael Vossbeck, Thomas Kaminski, Xiuli Xing, Jun Wang, Weimin Ju, and Jing M. Chen
Geosci. Model Dev., 17, 6337–6363, https://doi.org/10.5194/gmd-17-6337-2024, https://doi.org/10.5194/gmd-17-6337-2024, 2024
Short summary
Short summary
In this work, we developed the Nanjing University Carbon Assimilation System (NUCAS v1.0). Data assimilation experiments were conducted to demonstrate the robustness and investigate the feasibility and applicability of NUCAS. The assimilation of ecosystem carbonyl sulfide (COS) fluxes improved the model performance in gross primary productivity, evapotranspiration, and sensible heat, showing that COS provides constraints on parameters relevant to carbon-, water-, and energy-related processes.
Fang Li, Zhimin Zhou, Samuel Levis, Stephen Sitch, Felicity Hayes, Zhaozhong Feng, Peter B. Reich, Zhiyi Zhao, and Yanqing Zhou
Geosci. Model Dev., 17, 6173–6193, https://doi.org/10.5194/gmd-17-6173-2024, https://doi.org/10.5194/gmd-17-6173-2024, 2024
Short summary
Short summary
A new scheme is developed to model the surface ozone damage to vegetation in regional and global process-based models. Based on 4210 data points from ozone experiments, it accurately reproduces statistically significant linear or nonlinear photosynthetic and stomatal responses to ozone in observations for all vegetation types. It also enables models to implicitly capture the variability in plant ozone tolerance and the shift among species within a vegetation type.
Alexander S. Brunmayr, Frank Hagedorn, Margaux Moreno Duborgel, Luisa I. Minich, and Heather D. Graven
Geosci. Model Dev., 17, 5961–5985, https://doi.org/10.5194/gmd-17-5961-2024, https://doi.org/10.5194/gmd-17-5961-2024, 2024
Short summary
Short summary
A new generation of soil models promises to more accurately predict the carbon cycle in soils under climate change. However, measurements of 14C (the radioactive carbon isotope) in soils reveal that the new soil models face similar problems to the traditional models: they underestimate the residence time of carbon in soils and may therefore overestimate the net uptake of CO2 by the land ecosystem. Proposed solutions include restructuring the models and calibrating model parameters with 14C data.
Nina Raoult, Simon Beylat, James M. Salter, Frédéric Hourdin, Vladislav Bastrikov, Catherine Ottlé, and Philippe Peylin
Geosci. Model Dev., 17, 5779–5801, https://doi.org/10.5194/gmd-17-5779-2024, https://doi.org/10.5194/gmd-17-5779-2024, 2024
Short summary
Short summary
We use computer models to predict how the land surface will respond to climate change. However, these complex models do not always simulate what we observe in real life, limiting their effectiveness. To improve their accuracy, we use sophisticated statistical and computational techniques. We test a technique called history matching against more common approaches. This method adapts well to these models, helping us better understand how they work and therefore how to make them more realistic.
Jorn Bruggeman, Karsten Bolding, Lars Nerger, Anna Teruzzi, Simone Spada, Jozef Skákala, and Stefano Ciavatta
Geosci. Model Dev., 17, 5619–5639, https://doi.org/10.5194/gmd-17-5619-2024, https://doi.org/10.5194/gmd-17-5619-2024, 2024
Short summary
Short summary
To understand and predict the ocean’s capacity for carbon sequestration, its ability to supply food, and its response to climate change, we need the best possible estimate of its physical and biogeochemical properties. This is obtained through data assimilation which blends numerical models and observations. We present the Ensemble and Assimilation Tool (EAT), a flexible and efficient test bed that allows any scientist to explore and further develop the state of the art in data assimilation.
Dongyu Zheng, Andrew S. Merdith, Yves Goddéris, Yannick Donnadieu, Khushboo Gurung, and Benjamin J. W. Mills
Geosci. Model Dev., 17, 5413–5429, https://doi.org/10.5194/gmd-17-5413-2024, https://doi.org/10.5194/gmd-17-5413-2024, 2024
Short summary
Short summary
This study uses a deep learning method to upscale the time resolution of paleoclimate simulations to 1 million years. This improved resolution allows a climate-biogeochemical model to more accurately predict climate shifts. The method may be critical in developing new fully continuous methods that are able to be applied over a moving continental surface in deep time with high resolution at reasonable computational expense.
Boris Ťupek, Aleksi Lehtonen, Alla Yurova, Rose Abramoff, Bertrand Guenet, Elisa Bruni, Samuli Launiainen, Mikko Peltoniemi, Shoji Hashimoto, Xianglin Tian, Juha Heikkinen, Kari Minkkinen, and Raisa Mäkipää
Geosci. Model Dev., 17, 5349–5367, https://doi.org/10.5194/gmd-17-5349-2024, https://doi.org/10.5194/gmd-17-5349-2024, 2024
Short summary
Short summary
Updating the Yasso07 soil C model's dependency on decomposition with a hump-shaped Ricker moisture function improved modelled soil organic C (SOC) stocks in a catena of mineral and organic soils in boreal forest. The Ricker function, set to peak at a rate of 1 and calibrated against SOC and CO2 data using a Bayesian approach, showed a maximum in well-drained soils. Using SOC and CO2 data together with the moisture only from the topsoil humus was crucial for accurate model estimates.
Jacquelyn K. Shuman, Rosie A. Fisher, Charles Koven, Ryan Knox, Lara Kueppers, and Chonggang Xu
Geosci. Model Dev., 17, 4643–4671, https://doi.org/10.5194/gmd-17-4643-2024, https://doi.org/10.5194/gmd-17-4643-2024, 2024
Short summary
Short summary
We adapt a fire behavior and effects module for use in a size-structured vegetation demographic model to test how climate, fire regime, and fire-tolerance plant traits interact to determine the distribution of tropical forests and grasslands. Our model captures the connection between fire disturbance and plant fire-tolerance strategies in determining plant distribution and provides a useful tool for understanding the vulnerability of these areas under changing conditions across the tropics.
Yoshiki Kanzaki, Isabella Chiaravalloti, Shuang Zhang, Noah J. Planavsky, and Christopher T. Reinhard
Geosci. Model Dev., 17, 4515–4532, https://doi.org/10.5194/gmd-17-4515-2024, https://doi.org/10.5194/gmd-17-4515-2024, 2024
Short summary
Short summary
Soil pH is one of the most commonly measured agronomical and biogeochemical indices, mostly reflecting exchangeable acidity. Explicit simulation of both porewater and bulk soil pH is thus crucial to the accurate evaluation of alkalinity required to counteract soil acidification and the resulting capture of anthropogenic carbon dioxide through the enhanced weathering technique. This has been enabled by the updated reactive–transport SCEPTER code and newly developed framework to simulate soil pH.
Saeed Harati-Asl, Liliana Perez, and Roberto Molowny-Horas
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-57, https://doi.org/10.5194/gmd-2024-57, 2024
Revised manuscript accepted for GMD
Short summary
Short summary
Social-ecological systems are the subject of many sustainability problems. Because of the complexity of these systems we must be careful when intervening in them, otherwise we may cause irreversible damage. Using computer models, we can gain insight about these complex systems without harming them. In this paper we describe how we connected an ecological model of forest insect infestation with a social model of cooperation, and simulated an intervention measure to save a forest from infestation.
David Sandoval, Iain Colin Prentice, and Rodolfo L. B. Nóbrega
Geosci. Model Dev., 17, 4229–4309, https://doi.org/10.5194/gmd-17-4229-2024, https://doi.org/10.5194/gmd-17-4229-2024, 2024
Short summary
Short summary
Numerous estimates of water and energy balances depend on empirical equations requiring site-specific calibration, posing risks of "the right answers for the wrong reasons". We introduce novel first-principles formulations to calculate key quantities without requiring local calibration, matching predictions from complex land surface models.
Oliver Perkins, Matthew Kasoar, Apostolos Voulgarakis, Cathy Smith, Jay Mistry, and James D. A. Millington
Geosci. Model Dev., 17, 3993–4016, https://doi.org/10.5194/gmd-17-3993-2024, https://doi.org/10.5194/gmd-17-3993-2024, 2024
Short summary
Short summary
Wildfire is often presented in the media as a danger to human life. Yet globally, millions of people’s livelihoods depend on using fire as a tool. So, patterns of fire emerge from interactions between humans, land use, and climate. This complexity means scientists cannot yet reliably say how fire will be impacted by climate change. So, we developed a new model that represents globally how people use and manage fire. The model reveals the extent and diversity of how humans live with and use fire.
Amos P. K. Tai, David H. Y. Yung, and Timothy Lam
Geosci. Model Dev., 17, 3733–3764, https://doi.org/10.5194/gmd-17-3733-2024, https://doi.org/10.5194/gmd-17-3733-2024, 2024
Short summary
Short summary
We have developed the Terrestrial Ecosystem Model in R (TEMIR), which simulates plant carbon and pollutant uptake and predicts their response to varying atmospheric conditions. This model is designed to couple with an atmospheric chemistry model so that questions related to plant–atmosphere interactions, such as the effects of climate change, rising CO2, and ozone pollution on forest carbon uptake, can be addressed. The model has been well validated with both ground and satellite observations.
Jerome Guiet, Daniele Bianchi, Kim J. N. Scherrer, Ryan F. Heneghan, and Eric D. Galbraith
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-26, https://doi.org/10.5194/gmd-2024-26, 2024
Revised manuscript accepted for GMD
Short summary
Short summary
Numerical models that capture key features of the global dynamics of fish communities play a crucial role in addressing the impacts of climate change and industrial fishing on ecosystems and societies. Here, we detail an update of the BiOeconomic marine Trophic Size-spectrum model that corrects the model representation of the dynamic of fisheries in the High Seas. This update also allows a better representation of biodiversity to improve future global and regional fisheries studies.
Katherine A. Muller, Peishi Jiang, Glenn Hammond, Tasneem Ahmadullah, Hyun-Seob Song, Ravi Kukkadapu, Nicholas Ward, Madison Bowe, Rosalie K. Chu, Qian Zhao, Vanessa A. Garayburu-Caruso, Alan Roebuck, and Xingyuan Chen
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-34, https://doi.org/10.5194/gmd-2024-34, 2024
Revised manuscript accepted for GMD
Short summary
Short summary
The newly developed Lambda-PFLOTRAN workflow incorporates organic matter chemistry into reaction networks to simulate respiration and the resulting biogeochemistry. Lambda-PFLOTRAN is a python-based workflow via a Jupyter Notebook interface, that digests raw organic matter chemistry data via FTICR-MS, develops the representative reaction network, and completes a biogeochemical simulation with the open source, parallel reactive flow and transport code PFLOTRAN.
Fabian Stenzel, Johanna Braun, Jannes Breier, Karlheinz Erb, Dieter Gerten, Jens Heinke, Sarah Matej, Sebastian Ostberg, Sibyll Schaphoff, and Wolfgang Lucht
Geosci. Model Dev., 17, 3235–3258, https://doi.org/10.5194/gmd-17-3235-2024, https://doi.org/10.5194/gmd-17-3235-2024, 2024
Short summary
Short summary
We provide an R package to compute two biosphere integrity metrics that can be applied to simulations of vegetation growth from the dynamic global vegetation model LPJmL. The pressure metric BioCol indicates that we humans modify and extract > 20 % of the potential preindustrial natural biomass production. The ecosystems state metric EcoRisk shows a high risk of ecosystem destabilization in many regions as a result of climate change and land, water, and fertilizer use.
Elin Ristorp Aas, Heleen A. de Wit, and Terje K. Berntsen
Geosci. Model Dev., 17, 2929–2959, https://doi.org/10.5194/gmd-17-2929-2024, https://doi.org/10.5194/gmd-17-2929-2024, 2024
Short summary
Short summary
By including microbial processes in soil models, we learn how the soil system interacts with its environment and responds to climate change. We present a soil process model, MIMICS+, which is able to reproduce carbon stocks found in boreal forest soils better than a conventional land model. With the model we also find that when adding nitrogen, the relationship between soil microbes changes notably. Coupling the model to a vegetation model will allow for further study of these mechanisms.
Katarína Merganičová, Ján Merganič, Laura Dobor, Roland Hollós, Zoltán Barcza, Dóra Hidy, Zuzana Sitková, Pavel Pavlenda, Hrvoje Marjanovic, Daniel Kurjak, Michal Bošeľa, Doroteja Bitunjac, Masa Zorana Ostrogovic Sever, Jiří Novák, Peter Fleischer, and Tomáš Hlásny
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-45, https://doi.org/10.5194/gmd-2024-45, 2024
Revised manuscript accepted for GMD
Short summary
Short summary
We developed a multi-objective calibration approach leading to robust parameter values, aiming to strike a balance between their local precision and broad applicability. Using Biome-BGCMuSo model, we tested the calibrated parameter sets for simulating European beech forest dynamics across large environmental gradients. Leveraging data from 87 plots and five European countries, the results demonstrated reasonable local accuracy and plausible large-scale productivity responses.
Thomas Wutzler, Christian Reimers, Bernhard Ahrens, and Marion Schrumpf
Geosci. Model Dev., 17, 2705–2725, https://doi.org/10.5194/gmd-17-2705-2024, https://doi.org/10.5194/gmd-17-2705-2024, 2024
Short summary
Short summary
Soil microbes provide a strong link for elemental fluxes in the earth system. The SESAM model applies an optimality assumption to model those linkages and their adaptation. We found that a previous heuristic description was a special case of a newly developed more rigorous description. The finding of new behaviour at low microbial biomass led us to formulate the constrained enzyme hypothesis. We now can better describe how microbially mediated linkages of elemental fluxes adapt across decades.
Salvatore R. Curasi, Joe R. Melton, Elyn R. Humphreys, Txomin Hermosilla, and Michael A. Wulder
Geosci. Model Dev., 17, 2683–2704, https://doi.org/10.5194/gmd-17-2683-2024, https://doi.org/10.5194/gmd-17-2683-2024, 2024
Short summary
Short summary
Canadian forests are responding to fire, harvest, and climate change. Models need to quantify these processes and their carbon and energy cycling impacts. We develop a scheme that, based on satellite records, represents fire, harvest, and the sparsely vegetated areas that these processes generate. We evaluate model performance and demonstrate the impacts of disturbance on carbon and energy cycling. This work has implications for land surface modeling and assessing Canada’s terrestrial C cycle.
Yannek Käber, Florian Hartig, and Harald Bugmann
Geosci. Model Dev., 17, 2727–2753, https://doi.org/10.5194/gmd-17-2727-2024, https://doi.org/10.5194/gmd-17-2727-2024, 2024
Short summary
Short summary
Many forest models include detailed mechanisms of forest growth and mortality, but regeneration is often simplified. Testing and improving forest regeneration models is challenging. We address this issue by exploring how forest inventories from unmanaged European forests can be used to improve such models. We find that competition for light among trees is captured by the model, unknown model components can be informed by forest inventory data, and climatic effects are challenging to capture.
Jize Jiang, David S. Stevenson, and Mark A. Sutton
EGUsphere, https://doi.org/10.5194/egusphere-2024-962, https://doi.org/10.5194/egusphere-2024-962, 2024
Short summary
Short summary
A special model called AMmonia–CLIMate (AMCLIM) has been developed to understand and calculate NH3 emissions from fertilizer use, whilst taking into account how the environment influences these NH3 emissions. It is estimated that about 17 % of applied N in fertilizers were lost due to NH3 emissions. Hot and dry conditions and regions with high pH soils can expect higher NH3 emissions.
Jalisha T. Kallingal, Johan Lindström, Paul A. Miller, Janne Rinne, Maarit Raivonen, and Marko Scholze
Geosci. Model Dev., 17, 2299–2324, https://doi.org/10.5194/gmd-17-2299-2024, https://doi.org/10.5194/gmd-17-2299-2024, 2024
Short summary
Short summary
By unlocking the mysteries of CH4 emissions from wetlands, our work improved the accuracy of the LPJ-GUESS vegetation model using Bayesian statistics. Via assimilation of long-term real data from a wetland, we significantly enhanced CH4 emission predictions. This advancement helps us better understand wetland contributions to atmospheric CH4, which are crucial for addressing climate change. Our method offers a promising tool for refining global climate models and guiding conservation efforts
Stephen Björn Wirth, Johanna Braun, Jens Heinke, Sebastian Ostberg, Susanne Rolinski, Sibyll Schaphoff, Fabian Stenzel, Werner von Bloh, and Christoph Müller
EGUsphere, https://doi.org/10.5194/egusphere-2023-2946, https://doi.org/10.5194/egusphere-2023-2946, 2024
Short summary
Short summary
We present a new approach to model biological nitrogen fixation (BNF) in the Lund Potsdam Jena managed Land dynamic global vegetation model. While in the original approach BNF depended on actual evapotranspiration, the new approach considers soil water content and temperature, the nitrogen (N) deficit and carbon (C) costs. The new approach improved global sums and spatial patterns of BNF compared to the scientific literature and the models’ ability to project future C and N cycle dynamics.
Benjamin Post, Esteban Acevedo-Trejos, Andrew D. Barton, and Agostino Merico
Geosci. Model Dev., 17, 1175–1195, https://doi.org/10.5194/gmd-17-1175-2024, https://doi.org/10.5194/gmd-17-1175-2024, 2024
Short summary
Short summary
Creating computational models of how phytoplankton grows in the ocean is a technical challenge. We developed a new tool set (Xarray-simlab-ODE) for building such models using the programming language Python. We demonstrate the tool set in a library of plankton models (Phydra). Our goal was to allow scientists to develop models quickly, while also allowing the model structures to be changed easily. This allows us to test many different structures of our models to find the most appropriate one.
Taeken Wijmer, Ahmad Al Bitar, Ludovic Arnaud, Remy Fieuzal, and Eric Ceschia
Geosci. Model Dev., 17, 997–1021, https://doi.org/10.5194/gmd-17-997-2024, https://doi.org/10.5194/gmd-17-997-2024, 2024
Short summary
Short summary
Quantification of carbon fluxes of crops is an essential building block for the construction of a monitoring, reporting, and verification approach. We developed an end-to-end platform (AgriCarbon-EO) that assimilates, through a Bayesian approach, high-resolution (10 m) optical remote sensing data into radiative transfer and crop modelling at regional scale (100 x 100 km). Large-scale estimates of carbon flux are validated against in situ flux towers and yield maps and analysed at regional scale.
Moritz Laub, Sergey Blagodatsky, Marijn Van de Broek, Samuel Schlichenmaier, Benjapon Kunlanit, Johan Six, Patma Vityakon, and Georg Cadisch
Geosci. Model Dev., 17, 931–956, https://doi.org/10.5194/gmd-17-931-2024, https://doi.org/10.5194/gmd-17-931-2024, 2024
Short summary
Short summary
To manage soil organic matter (SOM) sustainably, we need a better understanding of the role that soil microbes play in aggregate protection. Here, we propose the SAMM model, which connects soil aggregate formation to microbial growth. We tested it against data from a tropical long-term experiment and show that SAMM effectively represents the microbial growth, SOM, and aggregate dynamics and that it can be used to explore the importance of aggregate formation in SOM stabilization.
Jianhong Lin, Daniel Berveiller, Christophe François, Heikki Hänninen, Alexandre Morfin, Gaëlle Vincent, Rui Zhang, Cyrille Rathgeber, and Nicolas Delpierre
Geosci. Model Dev., 17, 865–879, https://doi.org/10.5194/gmd-17-865-2024, https://doi.org/10.5194/gmd-17-865-2024, 2024
Short summary
Short summary
Currently, the high variability of budburst between individual trees is overlooked. The consequences of this neglect when projecting the dynamics and functioning of tree communities are unknown. Here we develop the first process-oriented model to describe the difference in budburst dates between individual trees in plant populations. Beyond budburst, the model framework provides a basis for studying the dynamics of phenological traits under climate change, from the individual to the community.
Skyler Kern, Mary E. McGuinn, Katherine M. Smith, Nadia Pinardi, Kyle E. Niemeyer, Nicole S. Lovenduski, and Peter E. Hamlington
Geosci. Model Dev., 17, 621–649, https://doi.org/10.5194/gmd-17-621-2024, https://doi.org/10.5194/gmd-17-621-2024, 2024
Short summary
Short summary
Computational models are used to simulate the behavior of marine ecosystems. The models often have unknown parameters that need to be calibrated to accurately represent observational data. Here, we propose a novel approach to simultaneously determine a large set of parameters for a one-dimensional model of a marine ecosystem in the surface ocean at two contrasting sites. By utilizing global and local optimization techniques, we estimate many parameters in a computationally efficient manner.
Shuaitao Wang, Vincent Thieu, Gilles Billen, Josette Garnier, Marie Silvestre, Audrey Marescaux, Xingcheng Yan, and Nicolas Flipo
Geosci. Model Dev., 17, 449–476, https://doi.org/10.5194/gmd-17-449-2024, https://doi.org/10.5194/gmd-17-449-2024, 2024
Short summary
Short summary
This paper presents unified RIVE v1.0, a unified version of the freshwater biogeochemistry model RIVE. It harmonizes different RIVE implementations, providing the referenced formalisms for microorganism activities to describe full biogeochemical cycles in the water column (e.g., carbon, nutrients, oxygen). Implemented as open-source projects in Python 3 (pyRIVE 1.0) and ANSI C (C-RIVE 0.32), unified RIVE v1.0 promotes and enhances collaboration among research teams and public services.
Sam S. Rabin, William J. Sacks, Danica L. Lombardozzi, Lili Xia, and Alan Robock
Geosci. Model Dev., 16, 7253–7273, https://doi.org/10.5194/gmd-16-7253-2023, https://doi.org/10.5194/gmd-16-7253-2023, 2023
Short summary
Short summary
Climate models can help us simulate how the agricultural system will be affected by and respond to environmental change, but to be trustworthy they must realistically reproduce historical patterns. When farmers plant their crops and what varieties they choose will be important aspects of future adaptation. Here, we improve the crop component of a global model to better simulate observed growing seasons and examine the impacts on simulated crop yields and irrigation demand.
Weihang Liu, Tao Ye, Christoph Müller, Jonas Jägermeyr, James A. Franke, Haynes Stephens, and Shuo Chen
Geosci. Model Dev., 16, 7203–7221, https://doi.org/10.5194/gmd-16-7203-2023, https://doi.org/10.5194/gmd-16-7203-2023, 2023
Short summary
Short summary
We develop a machine-learning-based crop model emulator with the inputs and outputs of multiple global gridded crop model ensemble simulations to capture the year-to-year variation of crop yield under future climate change. The emulator can reproduce the year-to-year variation of simulated yield given by the crop models under CO2, temperature, water, and nitrogen perturbations. Developing this emulator can provide a tool to project future climate change impact in a simple way.
Jurjen Rooze, Heewon Jung, and Hagen Radtke
Geosci. Model Dev., 16, 7107–7121, https://doi.org/10.5194/gmd-16-7107-2023, https://doi.org/10.5194/gmd-16-7107-2023, 2023
Short summary
Short summary
Chemical particles in nature have properties such as age or reactivity. Distributions can describe the properties of chemical concentrations. In nature, they are affected by mixing processes, such as chemical diffusion, burrowing animals, and bottom trawling. We derive equations for simulating the effect of mixing on central moments that describe the distributions. We then demonstrate applications in which these equations are used to model continua in disturbed natural environments.
Esteban Acevedo-Trejos, Jean Braun, Katherine Kravitz, N. Alexia Raharinirina, and Benoît Bovy
Geosci. Model Dev., 16, 6921–6941, https://doi.org/10.5194/gmd-16-6921-2023, https://doi.org/10.5194/gmd-16-6921-2023, 2023
Short summary
Short summary
The interplay of tectonics and climate influences the evolution of life and the patterns of biodiversity we observe on earth's surface. Here we present an adaptive speciation component coupled with a landscape evolution model that captures the essential earth-surface, ecological, and evolutionary processes that lead to the diversification of taxa. We can illustrate with our tool how life and landforms co-evolve to produce distinct biodiversity patterns on geological timescales.
Veli Çağlar Yumruktepe, Erik Askov Mousing, Jerry Tjiputra, and Annette Samuelsen
Geosci. Model Dev., 16, 6875–6897, https://doi.org/10.5194/gmd-16-6875-2023, https://doi.org/10.5194/gmd-16-6875-2023, 2023
Short summary
Short summary
We present an along BGC-Argo track 1D modelling framework. The model physics is constrained by the BGC-Argo temperature and salinity profiles to reduce the uncertainties related to mixed layer dynamics, allowing the evaluation of the biogeochemical formulation and parameterization. We objectively analyse the model with BGC-Argo and satellite data and improve the model biogeochemical dynamics. We present the framework, example cases and routines for model improvement and implementations.
Chonggang Xu, Bradley Christoffersen, Zachary Robbins, Ryan Knox, Rosie A. Fisher, Rutuja Chitra-Tarak, Martijn Slot, Kurt Solander, Lara Kueppers, Charles Koven, and Nate McDowell
Geosci. Model Dev., 16, 6267–6283, https://doi.org/10.5194/gmd-16-6267-2023, https://doi.org/10.5194/gmd-16-6267-2023, 2023
Short summary
Short summary
We introduce a plant hydrodynamic model for the U.S. Department of Energy (DOE)-sponsored model, the Functionally Assembled Terrestrial Ecosystem Simulator (FATES). To better understand this new model system and its functionality in tropical forest ecosystems, we conducted a global parameter sensitivity analysis at Barro Colorado Island, Panama. We identified the key parameters that affect the simulated plant hydrodynamics to guide both modeling and field campaign studies.
Jianghui Du
Geosci. Model Dev., 16, 5865–5894, https://doi.org/10.5194/gmd-16-5865-2023, https://doi.org/10.5194/gmd-16-5865-2023, 2023
Short summary
Short summary
Trace elements and isotopes (TEIs) are important tools to study the changes in the ocean environment both today and in the past. However, the behaviors of TEIs in marine sediments are poorly known, limiting our ability to use them in oceanography. Here we present a modeling framework that can be used to generate and run models of the sedimentary cycling of TEIs assisted with advanced numerical tools in the Julia language, lowering the coding barrier for the general user to study marine TEIs.
Siyu Zhu, Peipei Wu, Siyi Zhang, Oliver Jahn, Shu Li, and Yanxu Zhang
Geosci. Model Dev., 16, 5915–5929, https://doi.org/10.5194/gmd-16-5915-2023, https://doi.org/10.5194/gmd-16-5915-2023, 2023
Short summary
Short summary
In this study, we estimate the global biogeochemical cycling of Hg in a state-of-the-art physical-ecosystem ocean model (high-resolution-MITgcm/Hg), providing a more accurate portrayal of surface Hg concentrations in estuarine and coastal areas, strong western boundary flow and upwelling areas, and concentration diffusion as vortex shapes. The high-resolution model can help us better predict the transport and fate of Hg in the ocean and its impact on the global Hg cycle.
Maria Val Martin, Elena Blanc-Betes, Ka Ming Fung, Euripides P. Kantzas, Ilsa B. Kantola, Isabella Chiaravalloti, Lyla L. Taylor, Louisa K. Emmons, William R. Wieder, Noah J. Planavsky, Michael D. Masters, Evan H. DeLucia, Amos P. K. Tai, and David J. Beerling
Geosci. Model Dev., 16, 5783–5801, https://doi.org/10.5194/gmd-16-5783-2023, https://doi.org/10.5194/gmd-16-5783-2023, 2023
Short summary
Short summary
Enhanced rock weathering (ERW) is a CO2 removal strategy that involves applying crushed rocks (e.g., basalt) to agricultural soils. However, unintended processes within the N cycle due to soil pH changes may affect the climate benefits of C sequestration. ERW could drive changes in soil emissions of non-CO2 GHGs (N2O) and trace gases (NO and NH3) that may affect air quality. We present a new improved N cycling scheme for the land model (CLM5) to evaluate ERW effects on soil gas N emissions.
Özgür Gürses, Laurent Oziel, Onur Karakuş, Dmitry Sidorenko, Christoph Völker, Ying Ye, Moritz Zeising, Martin Butzin, and Judith Hauck
Geosci. Model Dev., 16, 4883–4936, https://doi.org/10.5194/gmd-16-4883-2023, https://doi.org/10.5194/gmd-16-4883-2023, 2023
Short summary
Short summary
This paper assesses the biogeochemical model REcoM3 coupled to the ocean–sea ice model FESOM2.1. The model can be used to simulate the carbon uptake or release of the ocean on timescales of several hundred years. A detailed analysis of the nutrients, ocean productivity, and ecosystem is followed by the carbon cycle. The main conclusion is that the model performs well when simulating the observed mean biogeochemical state and variability and is comparable to other ocean–biogeochemical models.
Hocheol Seo and Yeonjoo Kim
Geosci. Model Dev., 16, 4699–4713, https://doi.org/10.5194/gmd-16-4699-2023, https://doi.org/10.5194/gmd-16-4699-2023, 2023
Short summary
Short summary
Wildfire is a crucial factor in carbon and water fluxes on the Earth system. About 2.1 Pg of carbon is released into the atmosphere by wildfires annually. Because the fire processes are still limitedly represented in land surface models, we forced the daily GFED4 burned area into the land surface model over Alaska and Siberia. The results with the GFED4 burned area significantly improved the simulated carbon emissions and net ecosystem exchange compared to the default simulation.
Hideki Ninomiya, Tomomichi Kato, Lea Végh, and Lan Wu
Geosci. Model Dev., 16, 4155–4170, https://doi.org/10.5194/gmd-16-4155-2023, https://doi.org/10.5194/gmd-16-4155-2023, 2023
Short summary
Short summary
Non-structural carbohydrates (NSCs) play a crucial role in plants to counteract the effects of climate change. We added a new NSC module into the SEIB-DGVM, an individual-based ecosystem model. The simulated NSC levels and their seasonal patterns show a strong agreement with observed NSC data at both point and global scales. The model can be used to simulate the biotic effects resulting from insufficient NSCs, which are otherwise difficult to measure in terrestrial ecosystems globally.
Guillaume Marie, Jina Jeong, Hervé Jactel, Gunnar Petter, Maxime Cailleret, Matthew McGrath, Vladislav Bastrikov, Josefine Ghattas, Bertrand Guenet, Anne-Sofie Lansø, Kim Naudts, Aude Valade, Chao Yue, and Sebastiaan Luyssaert
EGUsphere, https://doi.org/10.5194/egusphere-2023-1216, https://doi.org/10.5194/egusphere-2023-1216, 2023
Short summary
Short summary
This research looks at how climate change influences forests, particularly how altered wind and insect activities could make forests emit, instead of absorb, carbon. We've updated a land surface model called ORCHIDEE to better examine the effect of bark beetles on forest health. Our findings suggest that sudden events, like insect outbreaks, can dramatically affect carbon storage, offering crucial insights for tackling climate change.
Miquel De Cáceres, Roberto Molowny-Horas, Antoine Cabon, Jordi Martínez-Vilalta, Maurizio Mencuccini, Raúl García-Valdés, Daniel Nadal-Sala, Santiago Sabaté, Nicolas Martin-StPaul, Xavier Morin, Francesco D'Adamo, Enric Batllori, and Aitor Améztegui
Geosci. Model Dev., 16, 3165–3201, https://doi.org/10.5194/gmd-16-3165-2023, https://doi.org/10.5194/gmd-16-3165-2023, 2023
Short summary
Short summary
Regional-level applications of dynamic vegetation models are challenging because they need to accommodate the variation in plant functional diversity. This can be done by estimating parameters from available plant trait databases while adopting alternative solutions for missing data. Here we present the design, parameterization and evaluation of MEDFATE (version 2.9.3), a novel model of forest dynamics for its application over a region in the western Mediterranean Basin.
Jens Heinke, Susanne Rolinski, and Christoph Müller
Geosci. Model Dev., 16, 2455–2475, https://doi.org/10.5194/gmd-16-2455-2023, https://doi.org/10.5194/gmd-16-2455-2023, 2023
Short summary
Short summary
We develop a livestock module for the global vegetation model LPJmL5.0 to simulate the impact of grazing dairy cattle on carbon and nitrogen cycles in grasslands. A novelty of the approach is that it accounts for the effect of feed quality on feed uptake and feed utilization by animals. The portioning of dietary nitrogen into milk, feces, and urine shows very good agreement with estimates obtained from animal trials.
Yimian Ma, Xu Yue, Stephen Sitch, Nadine Unger, Johan Uddling, Lina M. Mercado, Cheng Gong, Zhaozhong Feng, Huiyi Yang, Hao Zhou, Chenguang Tian, Yang Cao, Yadong Lei, Alexander W. Cheesman, Yansen Xu, and Maria Carolina Duran Rojas
Geosci. Model Dev., 16, 2261–2276, https://doi.org/10.5194/gmd-16-2261-2023, https://doi.org/10.5194/gmd-16-2261-2023, 2023
Short summary
Short summary
Plants have been found to respond differently to O3, but the variations in the sensitivities have rarely been explained nor fully implemented in large-scale assessment. This study proposes a new O3 damage scheme with leaf mass per area to unify varied sensitivities for all plant species. Our assessment reveals an O3-induced reduction of 4.8 % in global GPP, with the highest reduction of >10 % for cropland, suggesting an emerging risk of crop yield loss under the threat of O3 pollution.
Winslow D. Hansen, Adrianna Foster, Benjamin Gaglioti, Rupert Seidl, and Werner Rammer
Geosci. Model Dev., 16, 2011–2036, https://doi.org/10.5194/gmd-16-2011-2023, https://doi.org/10.5194/gmd-16-2011-2023, 2023
Short summary
Short summary
Permafrost and the thick soil-surface organic layers that insulate permafrost are important controls of boreal forest dynamics and carbon cycling. However, both are rarely included in process-based vegetation models used to simulate future ecosystem trajectories. To address this challenge, we developed a computationally efficient permafrost and soil organic layer module that operates at fine spatial (1 ha) and temporal (daily) resolutions.
Cited articles
Alhoz, K., Kenesei, K., Papageorgiou, M., Keurentjes, E. E. M., and de Jong, M.: Improved AHN3 Gridded DTM/DSM, Delft University of Technology, https://repository.tudelft.nl/islandora/object/uuid:153b2a82-05ba-412b-8a0a-119cb5689afd (last access: 15 November 2023) 2020. a
Aulakh, M. S., Wassmann, R., Bueno, C., and Rennenberg, H.: Impact of root exudates of different cultivars and plant development stages of rice (Oryza sativa L.) on methane production in a paddy soil, Plant Soil, 230, 77–86, https://doi.org/10.1023/A:1004817212321, 2001. a
Baldocchi, D. D.: Assessing the eddy covariance technique for evaluating carbon dioxide exchange rates of ecosystems: Past, present and future, Glob. Change Biol., 9, 479–492, https://doi.org/10.1046/j.1365-2486.2003.00629.x, 2003. a
Baldocchi, D. D. and Harley, P. C.: Scaling carbon dioxide and water vapour exchange from leaf to canopy in a deciduous forest. II. Model testing and application, Plant Cell Environ., 18, 1157–1173, https://doi.org/10.1111/j.1365-3040.1995.tb00626.x, 1995. a
Ballantyne, D. M., Hribljan, J. A., Pypker, T. G., and Chimner, R. A.: Long-term water table manipulations alter peatland gaseous carbon fluxes in Northern Michigan, Wetl. Ecol. Manag., 22, 35–47, https://doi.org/10.1007/s11273-013-9320-8, 2014. a
Bansal, S., Johnson, O. F., Meier, J., and Zhu, X.: Vegetation Affects Timing and Location of Wetland Methane Emissions, J. Geophys. Res.-Biogeo., 125, e2020JG005777, https://doi.org/10.1029/2020JG005777, 2020. a, b
Bao, T., Jia, G., and Xu, X.: Weakening greenhouse gas sink of pristine wetlands under warming, Nat. Clim. Change, 13, 462–469, https://doi.org/10.1038/s41558-023-01637-0, 2023. a
Basile-Doelsch, I., Balesdent, J., and Pellerin, S.: Reviews and syntheses: The mechanisms underlying carbon storage in soil, Biogeosciences, 17, 5223–5242, https://doi.org/10.5194/bg-17-5223-2020, 2020. a
Beven, K. and Freer, J.: Equifinality, data assimilation, and uncertainty estimation in mechanistic modelling of complex environmental systems using the GLUE methodology, J. Hydrol., 249, 11–29, https://doi.org/10.1016/S0022-1694(01)00421-8, 2001. a
Boonman, J., Hefting, M. M., van Huissteden, C. J. A., van den Berg, M., van Huissteden, J. (., Erkens, G., Melman, R., and van der Velde, Y.: Cutting peatland CO2 emissions with water management practices, Biogeosciences, 19, 5707–5727, https://doi.org/10.5194/bg-19-5707-2022, 2022. a
Box, J. E., Colgan, W. T., Christensen, T. R., Schmidt, N. M., Lund, M., Parmentier, F. J. W., Brown, R., Bhatt, U. S., Euskirchen, E. S., Romanovsky, V. E., Walsh, J. E., Overland, J. E., Wang, M., Corell, R. W., Meier, W. N., Wouters, B., Mernild, S., Mård, J., Pawlak, J., and Olsen, M. S.: Key indicators of Arctic climate change: 1971-2017, Environ. Res. Lett., 14, 045010, https://doi.org/10.1088/1748-9326/aafc1b, 2019. a
Bridgham, S. D., Cadillo-Quiroz, H., Keller, J. K., and Zhuang, Q.: Methane emissions from wetlands: Biogeochemical, microbial, and modeling perspectives from local to global scales, Glob. Change Biol., 19, 1325–1346, https://doi.org/10.1111/gcb.12131, 2013. a
Bubier, J.: The Relationship of Vegetation to Methane Emission and Hydrochemical Gradients in Northern Peatlands, J. Ecol., 83, 403–420, 2016. a
Chaney, N. W., Sheffield, J., Villarini, G., and Wood, E. F.: Development of a high-resolution gridded daily meteorological dataset over sub-Saharan Africa: Spatial analysis of trends in climate extremes, J. Climate, 27, 5815–5835, https://doi.org/10.1175/JCLI-D-13-00423.1, 2014. a
Christensen, T. R., Ekberg, A., Ström, L., Mastepanov, M., Panikov, N., Öquist, M., Svensson, B. H., Nykänen, H., Martikainen, P. J., and Oskarsson, H.: Factors controlling large scale variations in methane emissions from wetlands, Geophys. Res. Lett., 30, 67, https://doi.org/10.1029/2002GL016848, 2003. a
Churkina, G., Running, S. W., and Schloss, A. L.: Comparing global models of terrestrial net primary productivity (NPP): The importance of water availability, Glob. Change Biol., 5, 46–55, https://doi.org/10.1046/j.1365-2486.1999.00006.x, 1999. a
Clemmensen, K. E., Bahr, A., Ovaskainen, O., Dahlberg, A., Ekblad, A., Wallander, H., Stenlid, J., Finlay, R. D., Wardle, D. A., and Lindahl, B. D.: Roots and Associated Fungi Drive Long-Term Carbon Sequestration in Boreal Forest, Science, 339, 1615–1618, https://doi.org/10.1126/science.1231923, 2013. a
Crow, S. E. and Wieder, R. K.: Sources of CO2 emission from a northern peatland: Root respiration, exudation, and decomposition, Ecology, 86, 1825–1834, https://doi.org/10.1890/04-1575, 2005. a
Davidson, E. and Janssens, I. A.: Temperature sensitivity of soil carbon decomposition and feedbacks to climate change, Nature, 440, 165–173, https://doi.org/10.1038/nature04514, 2006. a
De Boeck, H. J., Dreesen, F. E., Janssens, I. A., and Nijs, I.: Whole-system responses of experimental plant communities to climate extremes imposed in different seasons, New Phytol., 189, 806–817, https://doi.org/10.1111/j.1469-8137.2010.03515.x, 2011. a
De La Motte, L. G., Beauclaire, Q., Heinesch, B., Cuntz, M., Foltýnová, L., Šigut, L., Kowalska, N., Manca, G., Ballarin, I. G., Vincke, C., Roland, M., Ibrom, A., Lousteau, D., Siebicke, L., Neiryink, J., and Longdoz, B.: Non-stomatal processes reduce gross primary productivity in temperate forest ecosystems during severe edaphic drought: Edaphic drought in forest ecosystems, Philos. T. Roy. Soc. B, 375, 20190527, https://doi.org/10.1098/rstb.2019.0527, 2020. a
De Lange, W. J., Prinsen, G. F., Hoogewoud, J. C., Veldhuizen, A. A., Verkaik, J., Oude Essink, G. H., Van Walsum, P. E., Delsman, J. R., Hunink, J. C., Massop, H. T. L., and Kroon, T.: An operational, multi-scale, multi-model system for consensus-based, integrated water management and policy analysis: The Netherlands Hydrological Instrument, Environ. Model. Softw., 59, 98–108, https://doi.org/10.1016/j.envsoft.2014.05.009, 2014. a
Dick, J. J., Tetzlaff, D., Birkel, C., and Soulsby, C.: Modelling landscape controls on dissolved organic carbon sources and fluxes to streams, Biogeochemistry, 122, 361–374, https://doi.org/10.1007/s10533-014-0046-3, 2015. a
Dorrepaal, E., Aerts, R., Cornelissen, J. H., Van Logtestijn, R. S., and Callaghan, T. V.: Sphagnum modifies climate-change impacts on subarctic vascular bog plants, Funct. Ecol., 20, 31–41, https://doi.org/10.1111/j.1365-2435.2006.01076.x, 2006. a, b
Dorrepaal, E., Cornelissen, J. H., and Aerts, R.: Changing leaf litter feedbacks on plant production across contrasting sub-arctic peatland species and growth forms, Oecologia, 151, 251–261, https://doi.org/10.1007/s00442-006-0580-3, 2007. a, b, c
Dorrepaal, E., Toet, S., Van Logtestijn, R. S., Swart, E., Van De Weg, M. J., Callaghan, T. V., and Aerts, R.: Carbon respiration from subsurface peat accelerated by climate warming in the subarctic, Nature, 460, 616–619, https://doi.org/10.1038/nature08216, 2009. a, b, c
Erkens, G., Van Der Meulen, M. J., and Middelkoop, H.: Double trouble: Subsidence and CO2 respiration due to 1,000 years of Dutch coastal peatlands cultivation, Hydrogeol. J., 24, 551–568, https://doi.org/10.1007/s10040-016-1380-4, 2016. a
Evans, C. D., Peacock, M., Baird, A. J., Artz, R. R., Burden, A., Callaghan, N., Chapman, P. J., Cooper, H. M., Coyle, M., Craig, E., Cumming, A., Dixon, S., Gauci, V., Grayson, R. P., Helfter, C., Heppell, C. M., Holden, J., Jones, D. L., Kaduk, J., Levy, P., Matthews, R., McNamara, N. P., Misselbrook, T., Oakley, S., Page, S. E., Rayment, M., Ridley, L. M., Stanley, K. M., Williamson, J. L., Worrall, F., and Morrison, R.: Overriding water table control on managed peatland greenhouse gas emissions, Nature, 593, 548–552, https://doi.org/10.1038/s41586-021-03523-1, 2021. a, b
Frolking, S. and Roulet, N. T.: Holocene radiative forcing impact of northern peatland carbon accumulation and methane emissions, Glob. Change Biol., 13, 1079–1088, https://doi.org/10.1111/j.1365-2486.2007.01339.x, 2007. a
Gerten, D., Schaphoff, S., Haberlandt, U., Lucht, W., and Sitch, S.: Terrestrial vegetation and water balance – Hydrological evaluation of a dynamic global vegetation model, J. Hydrol., 286, 249–270, https://doi.org/10.1016/j.jhydrol.2003.09.029, 2004. a
Geurts, J. and Fritz, C.: Paludiculture pilots and experiments with focus on cattail and reed in the Netherlands. Technical, Tech. rep., Radboud University Nijmegen, Nijmegen, https://doi.org/10.13140/RG.2.2.12916.24966, 2018. a
Gorham, E.: Shoot height, weight and standing crop in relation to density of monospecific plant stands, Nature, 279, 148–150, https://doi.org/10.1038/279148a0, 1979. a
Graf, M. and Rochefort, L.: Examining the peat-accumulating potential of fen vegetation in the context of fen restoration of harvested peatlands, Ecoscience, 16, 158–166, https://doi.org/10.2980/16-2-3128, 2009. a, b, c
Granberg, G., Grip, H., Ottosson Löfvenius, M., Sundh, I., Svensson, B. H., and Nilsson, M.: A simple model for simulation of water content, soil frost, and soil temperatures in boreal mixed mires, Water Resour. Res., 35, 3771–3782, https://doi.org/10.1029/1999WR900216, 1999. a
Gunnarsson, U., Granberg, G., and Nilsson, M.: Growth, production and interspecific competition in Sphagnum: Effects of temperature, nitrogen and sulphur treatments on a boreal mire, New Phytol., 163, 349–359, https://doi.org/10.1111/j.1469-8137.2004.01108.x, 2004. a
Günther, A., Barthelmes, A., Huth, V., Joosten, H., Jurasinski, G., Koebsch, F., and Couwenberg, J.: Prompt rewetting of drained peatlands reduces climate warming despite methane emissions, Nat. Commun., 11, 1644, https://doi.org/10.1038/s41467-020-15499-z, 2020. a
Gupta, H. V., Kling, H., Yilmaz, K. K., and Martinez, G. F.: Decomposition of the mean squared error and NSE performance criteria: Implications for improving hydrological modelling, J. Hydrol., 377, 80–91, https://doi.org/10.1016/j.jhydrol.2009.08.003, 2009. a
Harpenslager, S. F., van den Elzen, E., Kox, M. A., Smolders, A. J., Ettwig, K. F., and Lamers, L. P.: Rewetting former agricultural peatlands: Topsoil removal as a prerequisite to avoid strong nutrient and greenhouse gas emissions, Ecol. Eng., 84, 159–168, https://doi.org/10.1016/j.ecoleng.2015.08.002, 2015. a, b, c
Haxeltine, A. and Prentice, I. C.: BIOME3: An equilibrium terrestrial biosphere model based on ecophysiological constraints, resource availability, and competition among plant functional types, Global Biogeochem. Cy., 10, 693–709, https://doi.org/10.1029/96GB02344, 1996. a, b, c
Heijmans, M. M., Mauquoy, D., Van Geel, B., and Berendse, F.: Long-term effects of climate change on vegetation and carbon dynamics in peat bogs, J. Veg. Sci., 19, 307–320, https://doi.org/10.3170/2008-8-18368, 2008. a, b, c
Heijmans, M. M., Mauquoy, D., Van Geel, B., and Berendse, F.: Long-term effects of climate change on vegetation and carbon dynamics in peat bogs, J. Veg. Sci., 19, 307–320, https://doi.org/10.3170/2008-8-18368, 2008. a
Hendriks, D. M. D., van Huissteden, J., Dolman, A. J., and van der Molen, M. K.: The full greenhouse gas balance of an abandoned peat meadow, Biogeosciences, 4, 411–424, https://doi.org/10.5194/bg-4-411-2007, 2007. a, b, c
Hobbie, S. E., Schimel, J. P., Trumbore, S. E., and Randerson, J. R.: Controls over carbon storage and turnover in high-latitude soils, Glob. Change Biol., 6, 196–210, https://doi.org/10.1046/j.1365-2486.2000.06021.x, 2000. a
Högberg, P., Nordgren, A., Buchmann, N., Taylor, A. F., Ekblad, A., Högberg, M. N., Nyberg, G., Ottosson-Löfvenius, M., and Read, D. J.: Large-scale forest girdling shows that current photosynthesis drives soil respiration, Nature, 411, 789–792, https://doi.org/10.1038/35081058, 2001. a
Huang, S., Titus, S. J., and Wiens, D. P.: Comparison of nonlinear height-diameter functions for major Alberta tree species, Can. J. Forest Res., 22, 1297–1304, https://doi.org/10.1139/x92-172, 1992. a
Iversen, C. M., Sloan, V. L., Sullivan, P. F., Euskirchen, E. S., Mcguire, A. D., Norby, R. J., Walker, A. P., Warren, J. M., and Wullschleger, S. D.: The unseen iceberg: Plant roots in arctic tundra, New Phytol., 205, 34–58, https://doi.org/10.1111/nph.13003, 2015. a, b
Jaatinen, K., Laiho, R., Vuorenmaa, A., Del Castillo, U., Minkkinen, K., Pennanen, T., Penttilä, T., and Fritze, H.: Responses of aerobic microbial communities and soil respiration to water-level drawdown in a northern boreal fen, Environ. Microbiol., 10, 339–353, https://doi.org/10.1111/j.1462-2920.2007.01455.x, 2008. a
Jackowicz-Korczyński, M., Christensen, T. R., Bäckstrand, K., Crill, P., Friborg, T., Mastepanov, M., and Ström, L.: Annual cycle of methane emission from a subarctic peatland, J. Geophys. Res.-Biogeo., 115, G02009, https://doi.org/10.1029/2008JG000913, 2010. a, b
Jackson, R. B., Canadell, J., Ehleringer, J. R., Mooney, H. A., Sala, O. E., and Schulze, E. D.: A global analysis of root distributions for terrestrial biomes, Oecologia, 108, 389–411, https://doi.org/10.1007/BF00333714, 1996. a
Järveoja, J., Laht, J., Maddison, M., Soosaar, K., Ostonen, I., and Mander, Ü.: Mitigation of greenhouse gas emissions from an abandoned Baltic peat extraction area by growing reed canary grass: Life-cycle assessment, Reg. Environ. Change, 13, 781–795, https://doi.org/10.1007/s10113-012-0355-9, 2013. a
Kattge, J., Díaz, S., Lavorel, S., Prentice, I. C., Leadley, P., Bönisch, G., Garnier, E., Westoby, M., Reich, P. B., Wright, I. J., Cornelissen, J. H., Violle, C., Harrison, S. P., Van Bodegom, P. M., Reichstein, M., Enquist, B. J., Soudzilovskaia, N. A., Ackerly, D. D., Anand, M., Atkin, O., Bahn, M., Baker, T. R., Baldocchi, D., Bekker, R., Blanco, C. C., Blonder, B., Bond, W. J., Bradstock, R., Bunker, D. E., Casanoves, F., Cavender-Bares, J., Chambers, J. Q., Chapin, F. S., Chave, J., Coomes, D., Cornwell, W. K., Craine, J. M., Dobrin, B. H., Duarte, L., Durka, W., Elser, J., Esser, G., Estiarte, M., Fagan, W. F., Fang, J., Fernández-Méndez, F., Fidelis, A., Finegan, B., Flores, O., Ford, H., Frank, D., Freschet, G. T., Fyllas, N. M., Gallagher, R. V., Green, W. A., Gutierrez, A. G., Hickler, T., Higgins, S. I., Hodgson, J. G., Jalili, A., Jansen, S., Joly, C. A., Kerkhoff, A. J., Kirkup, D., Kitajima, K., Kleyer, M., Klotz, S., Knops, J. M., Kramer, K., Kühn, I., Kurokawa, H., Laughlin, D., Lee, T. D., Leishman, M., Lens, F., Lenz, T., Lewis, S. L., Lloyd, J., Llusià, J., Louault, F., Ma, S., Mahecha, M. D., Manning, P., Massad, T., Medlyn, B. E., Messier, J., Moles, A. T., Müller, S. C., Nadrowski, K., Naeem, S., Niinemets, Ü., Nöllert, S., Nüske, A., Ogaya, R., Oleksyn, J., Onipchenko, V. G., Onoda, Y., Ordoñez, J., Overbeck, G., Ozinga, W. A., Patiño, S., Paula, S., Pausas, J. G., Peñuelas, J., Phillips, O. L., Pillar, V., Poorter, H., Poorter, L., Poschlod, P., Prinzing, A., Proulx, R., Rammig, A., Reinsch, S., Reu, B., Sack, L., Salgado-Negret, B., Sardans, J., Shiodera, S., Shipley, B., Siefert, A., Sosinski, E., Soussana, J. F., Swaine, E., Swenson, N., Thompson, K., Thornton, P., Waldram, M., Weiher, E., White, M., White, S., Wright, S. J., Yguel, B., Zaehle, S., Zanne, A. E., and Wirth, C.: TRY – a global database of plant traits, Glob. Change Biol., 17, 2905–2935, https://doi.org/10.1111/j.1365-2486.2011.02451.x, 2011. a, b
Kattge, J., Bönisch, G., Díaz, S., Lavorel, S., Prentice, I. C., Leadley, P., Tautenhahn, S., Werner, G. D., Aakala, T., Abedi, M., Acosta, A. T., Adamidis, G. C., Adamson, K., Aiba, M., Albert, C. H., Alcántara, J. M., Alcázar C, C., Aleixo, I., Ali, H., Amiaud, B., Ammer, C., Amoroso, M. M., Anand, M., Anderson, C., Anten, N., Antos, J., Apgaua, D. M. G., Ashman, T. L., Asmara, D. H., Asner, G. P., Aspinwall, M., Atkin, O., Aubin, I., Baastrup-Spohr, L., Bahalkeh, K., Bahn, M., Baker, T., Baker, W. J., Bakker, J. P., Baldocchi, D., Baltzer, J., Banerjee, A., Baranger, A., Barlow, J., Barneche, D. R., Baruch, Z., Bastianelli, D., Battles, J., Bauerle, W., Bauters, M., Bazzato, E., Beckmann, M., Beeckman, H., Beierkuhnlein, C., Bekker, R., Belfry, G., Belluau, M., Beloiu, M., Benavides, R., Benomar, L., Berdugo-Lattke, M. L., Berenguer, E., Bergamin, R., Bergmann, J., Bergmann Carlucci, M., Berner, L., Bernhardt-Römermann, M., Bigler, C., Bjorkman, A. D., Blackman, C., Blanco, C., Blonder, B., Blumenthal, D., Bocanegra-González, K. T., Boeckx, P., Bohlman, S., Böhning-Gaese, K., Boisvert-Marsh, L., Bond, W., Bond-Lamberty, B., Boom, A., Boonman, C. C., Bordin, K., Boughton, E. H., Boukili, V., Bowman, D. M., Bravo, S., Brendel, M. R., Broadley, M. R., Brown, K. A., Bruelheide, H., Brumnich, F., Bruun, H. H., Bruy, D., Buchanan, S. W., Bucher, S. F., Buchmann, N., Buitenwerf, R., Bunker, D. E., Bürger, J., Burrascano, S., Burslem, D. F., Butterfield, B. J., Byun, C., Marques, M., Scalon, M. C., Caccianiga, M., Cadotte, M., Cailleret, M., Camac, J., Camarero, J. J., Campany, C., Campetella, G., Campos, J. A., Cano-Arboleda, L., Canullo, R., Carbognani, M., Carvalho, F., Casanoves, F., Castagneyrol, B., Catford, J. A., Cavender-Bares, J., Cerabolini, B. E., Cervellini, M., Chacón-Madrigal, E., Chapin, K., Chapin, F. S., Chelli, S., Chen, S. C., Chen, A., Cherubini, P., Chianucci, F., Choat, B., Chung, K. S., Chytrý, M., Ciccarelli, D., Coll, L., Collins, C. G., Conti, L., Coomes, D., Cornelissen, J. H., Cornwell, W. K., Corona, P., Coyea, M., Craine, J., Craven, D., Cromsigt, J. P., Csecserits, A., Cufar, K., Cuntz, M., da Silva, A. C., Dahlin, K. M., Dainese, M., Dalke, I., Dalle Fratte, M., Dang-Le, A. T., Danihelka, J., Dannoura, M., Dawson, S., de Beer, A. J., De Frutos, A., De Long, J. R., Dechant, B., Delagrange, S., Delpierre, N., Derroire, G., Dias, A. S., Diaz-Toribio, M. H., Dimitrakopoulos, P. G., Dobrowolski, M., Doktor, D., Dřevojan, P., Dong, N., Dransfield, J., Dressler, S., Duarte, L., Ducouret, E., Dullinger, S., Durka, W., Duursma, R., Dymova, O., E-Vojtkó, A., Eckstein, R. L., Ejtehadi, H., Elser, J., Emilio, T., Engemann, K., Erfanian, M. B., Erfmeier, A., Esquivel-Muelbert, A., Esser, G., Estiarte, M., Domingues, T. F., Fagan, W. F., Fagúndez, J., Falster, D. S., Fan, Y., Fang, J., Farris, E., Fazlioglu, F., Feng, Y., Fernandez-Mendez, F., Ferrara, C., Ferreira, J., Fidelis, A., Finegan, B., Firn, J., Flowers, T. J., Flynn, D. F., Fontana, V., Forey, E., Forgiarini, C., François, L., Frangipani, M., Frank, D., Frenette-Dussault, C., Freschet, G. T., Fry, E. L., Fyllas, N. M., Mazzochini, G. G., Gachet, S., Gallagher, R., Ganade, G., Ganga, F., García-Palacios, P., Gargaglione, V., Garnier, E., Garrido, J. L., de Gasper, A. L., Gea-Izquierdo, G., Gibson, D., Gillison, A. N., Giroldo, A., Glasenhardt, M. C., Gleason, S., Gliesch, M., Goldberg, E., Göldel, B., Gonzalez-Akre, E., Gonzalez-Andujar, J. L., González-Melo, A., González-Robles, A., Graae, B. J., Granda, E., Graves, S., Green, W. A., Gregor, T., Gross, N., Guerin, G. R., Günther, A., Gutiérrez, A. G., Haddock, L., Haines, A., Hall, J., Hambuckers, A., Han, W., Harrison, S. P., Hattingh, W., Hawes, J. E., He, T., He, P., Heberling, J. M., Helm, A., Hempel, S., Hentschel, J., Hérault, B., Hereş, A. M., Herz, K., Heuertz, M., Hickler, T., Hietz, P., Higuchi, P., Hipp, A. L., Hirons, A., Hock, M., Hogan, J. A., Holl, K., Honnay, O., Hornstein, D., Hou, E., Hough-Snee, N., Hovstad, K. A., Ichie, T., Igić, B., Illa, E., Isaac, M., Ishihara, M., Ivanov, L., Ivanova, L., Iversen, C. M., Izquierdo, J., Jackson, R. B., Jackson, B., Jactel, H., Jagodzinski, A. M., Jandt, U., Jansen, S., Jenkins, T., Jentsch, A., Jespersen, J. R. P., Jiang, G. F., Johansen, J. L., Johnson, D., Jokela, E. J., Joly, C. A., Jordan, G. J., Joseph, G. S., Junaedi, D., Junker, R. R., Justes, E., Kabzems, R., Kane, J., Kaplan, Z., Kattenborn, T., Kavelenova, L., Kearsley, E., Kempel, A., Kenzo, T., Kerkhoff, A., Khalil, M. I., Kinlock, N. L., Kissling, W. D., Kitajima, K., Kitzberger, T., Kjøller, R., Klein, T., Kleyer, M., Klimešová, J., Klipel, J., Kloeppel, B., Klotz, S., Knops, J. M., Kohyama, T., Koike, F., Kollmann, J., Komac, B., Komatsu, K., König, C., Kraft, N. J., Kramer, K., Kreft, H., Kühn, I., Kumarathunge, D., Kuppler, J., Kurokawa, H., Kurosawa, Y., Kuyah, S., Laclau, J. P., Lafleur, B., Lallai, E., Lamb, E., Lamprecht, A., Larkin, D. J., Laughlin, D., Le Bagousse-Pinguet, Y., le Maire, G., le Roux, P. C., le Roux, E., Lee, T., Lens, F., Lewis, S. L., Lhotsky, B., Li, Y., Li, X., Lichstein, J. W., Liebergesell, M., Lim, J. Y., Lin, Y. S., Linares, J. C., Liu, C., Liu, D., Liu, U., Livingstone, S., Llusià, J., Lohbeck, M., López-García, Á., Lopez-Gonzalez, G., Lososová, Z., Louault, F., Lukács, B. A., Lukeš, P., Luo, Y., Lussu, M., Ma, S., Maciel Rabelo Pereira, C., Mack, M., Maire, V., Mäkelä, A., Mäkinen, H., Malhado, A. C. M., Mallik, A., Manning, P., Manzoni, S., Marchetti, Z., Marchino, L., Marcilio-Silva, V., Marcon, E., Marignani, M., Markesteijn, L., Martin, A., Martínez-Garza, C., Martínez-Vilalta, J., Mašková, T., Mason, K., Mason, N., Massad, T. J., Masse, J., Mayrose, I., McCarthy, J., McCormack, M. L., McCulloh, K., McFadden, I. R., McGill, B. J., McPartland, M. Y., Medeiros, J. S., Medlyn, B., Meerts, P., Mehrabi, Z., Meir, P., Melo, F. P., Mencuccini, M., Meredieu, C., Messier, J., Mészáros, I., Metsaranta, J., Michaletz, S. T., Michelaki, C., Migalina, S., Milla, R., Miller, J. E., Minden, V., Ming, R., Mokany, K., Moles, A. T., Molnár, A., Molofsky, J., Molz, M., Montgomery, R. A., Monty, A., Moravcová, L., Moreno-Martínez, A., Moretti, M., Mori, A. S., Mori, S., Morris, D., Morrison, J., Mucina, L., Mueller, S., Muir, C. D., Müller, S. C., Munoz, F., Myers-Smith, I. H., Myster, R. W., Nagano, M., Naidu, S., Narayanan, A., Natesan, B., Negoita, L., Nelson, A. S., Neuschulz, E. L., Ni, J., Niedrist, G., Nieto, J., Niinemets, Ü., Nolan, R., Nottebrock, H., Nouvellon, Y., Novakovskiy, A., Nystuen, K. O., O'Grady, A., O'Hara, K., O'Reilly-Nugent, A., Oakley, S., Oberhuber, W., Ohtsuka, T., Oliveira, R., Öllerer, K., Olson, M. E., Onipchenko, V., Onoda, Y., Onstein, R. E., Ordonez, J. C., Osada, N., Ostonen, I., Ottaviani, G., Otto, S., Overbeck, G. E., Ozinga, W. A., Pahl, A. T., Paine, C. E., Pakeman, R. J., Papageorgiou, A. C., Parfionova, E., Pärtel, M., Patacca, M., Paula, S., Paule, J., Pauli, H., Pausas, J. G., Peco, B., Penuelas, J., Perea, A., Peri, P. L., Petisco-Souza, A. C., Petraglia, A., Petritan, A. M., Phillips, O. L., Pierce, S., Pillar, V. D., Pisek, J., Pomogaybin, A., Poorter, H., Portsmuth, A., Poschlod, P., Potvin, C., Pounds, D., Powell, A. S., Power, S. A., Prinzing, A., Puglielli, G., Pyšek, P., Raevel, V., Rammig, A., Ransijn, J., Ray, C. A., Reich, P. B., Reichstein, M., Reid, D. E., Réjou-Méchain, M., de Dios, V. R., Ribeiro, S., Richardson, S., Riibak, K., Rillig, M. C., Riviera, F., Robert, E. M., Roberts, S., Robroek, B., Roddy, A., Rodrigues, A. V., Rogers, A., Rollinson, E., Rolo, V., Römermann, C., Ronzhina, D., Roscher, C., Rosell, J. A., Rosenfield, M. F., Rossi, C., Roy, D. B., Royer-Tardif, S., Rüger, N., Ruiz-Peinado, R., Rumpf, S. B., Rusch, G. M., Ryo, M., Sack, L., Saldaña, A., Salgado-Negret, B., Salguero-Gomez, R., Santa-Regina, I., Santacruz-García, A. C., Santos, J., Sardans, J., Schamp, B., Scherer-Lorenzen, M., Schleuning, M., Schmid, B., Schmidt, M., Schmitt, S., Schneider, J. V., Schowanek, S. D., Schrader, J., Schrodt, F., Schuldt, B., Schurr, F., Selaya Garvizu, G., Semchenko, M., Seymour, C., Sfair, J. C., Sharpe, J. M., Sheppard, C. S., Sheremetiev, S., Shiodera, S., Shipley, B., Shovon, T. A., Siebenkäs, A., Sierra, C., Silva, V., Silva, M., Sitzia, T., Sjöman, H., Slot, M., Smith, N. G., Sodhi, D., Soltis, P., Soltis, D., Somers, B., Sonnier, G., Sørensen, M. V., Sosinski, E. E., Soudzilovskaia, N. A., Souza, A. F., Spasojevic, M., Sperandii, M. G., Stan, A. B., Stegen, J., Steinbauer, K., Stephan, J. G., Sterck, F., Stojanovic, D. B., Strydom, T., Suarez, M. L., Svenning, J. C., Svitková, I., Svitok, M., Svoboda, M., Swaine, E., Swenson, N., Tabarelli, M., Takagi, K., Tappeiner, U., Tarifa, R., Tauugourdeau, S., Tavsanoglu, C., te Beest, M., Tedersoo, L., Thiffault, N., Thom, D., Thomas, E., Thompson, K., Thornton, P. E., Thuiller, W., Tichý, L., Tissue, D., Tjoelker, M. G., Tng, D. Y. P., Tobias, J., Török, P., Tarin, T., Torres-Ruiz, J. M., Tóthmérész, B., Treurnicht, M., Trivellone, V., Trolliet, F., Trotsiuk, V., Tsakalos, J. L., Tsiripidis, I., Tysklind, N., Umehara, T., Usoltsev, V., Vadeboncoeur, M., Vaezi, J., Valladares, F., Vamosi, J., van Bodegom, P. M., van Breugel, M., Van Cleemput, E., van de Weg, M., van der Merwe, S., van der Plas, F., van der Sande, M. T., van Kleunen, M., Van Meerbeek, K., Vanderwel, M., Vanselow, K. A., Vårhammar, A., Varone, L., Vasquez Valderrama, M. Y., Vassilev, K., Vellend, M., Veneklaas, E. J., Verbeeck, H., Verheyen, K., Vibrans, A., Vieira, I., Villacís, J., Violle, C., Vivek, P., Wagner, K., Waldram, M., Waldron, A., Walker, A. P., Waller, M., Walther, G., Wang, H., Wang, F., Wang, W., Watkins, H., Watkins, J., Weber, U., Weedon, J. T., Wei, L., Weigelt, P., Weiher, E., Wells, A. W., Wellstein, C., Wenk, E., Westoby, M., Westwood, A., White, P. J., Whitten, M., Williams, M., Winkler, D. E., Winter, K., Womack, C., Wright, I. J., Wright, S. J., Wright, J., Pinho, B. X., Ximenes, F., Yamada, T., Yamaji, K., Yanai, R., Yankov, N., Yguel, B., Zanini, K. J., Zanne, A. E., Zelený, D., Zhao, Y. P., Zheng, J., Zheng, J., Ziemińska, K., Zirbel, C. R., Zizka, G., Zo-Bi, I. C., Zotz, G., and Wirth, C.: TRY plant trait database – enhanced coverage and open access, Glob. Change Biol., 26, 119–188, https://doi.org/10.1111/gcb.14904, 2020. a, b
Keenan, T., Sabate, S., and Gracia, C.: The importance of mesophyll conductance in regulating forest ecosystem productivity during drought periods, Glob. Change Biol., 16, 1019–1034, https://doi.org/10.1111/j.1365-2486.2009.02017.x, 2010. a
Kling, H., Fuchs, M., and Paulin, M.: Runoff conditions in the upper Danube basin under an ensemble of climate change scenarios, J. Hydrol., 424–425, 264–277, https://doi.org/10.1016/j.jhydrol.2012.01.011, 2012. a
Knox, S. H., Sturtevant, C., Matthes, J. H., Koteen, L., Verfaillie, J., and Baldocchi, D.: Agricultural peatland restoration: Effects of land-use change on greenhouse gas (CO2 and CH4) fluxes in the Sacramento-San Joaquin Delta, Glob. Change Biol., 21, 750–765, https://doi.org/10.1111/gcb.12745, 2015. a, b, c
Koebsch, F., Sonnentag, O., Järveoja, J., Peltoniemi, M., Alekseychik, P., Aurela, M., Arslan, A. N., Dinsmore, K., Gianelle, D., Helfter, C., Jackowicz-Korczynski, M., Korrensalo, A., Leith, F., Linkosalmi, M., Lohila, A., Lund, M., Maddison, M., Mammarella, I., Mander, Ü., Minkkinen, K., Pickard, A., Pullens, J. W., Tuittila, E. S., Nilsson, M. B., and Peichl, M.: Refining the role of phenology in regulating gross ecosystem productivity across European peatlands, Glob. Change Biol., 26, 876–887, https://doi.org/10.1111/gcb.14905, 2020. a
Krinner, G., Viovy, N., de Noblet-Ducoudré, N., Ogée, J., Polcher, J., Friedlingstein, P., Ciais, P., Sitch, S., and Prentice, I. C.: A dynamic global vegetation model for studies of the coupled atmosphere-biosphere system, Global Biogeochem. Cy., 19, 1–33, https://doi.org/10.1029/2003GB002199, 2005. a, b
Lafleur, P. M., Roulet, N. T., Bubier, J. L., Frolking, S., and Moore, T. R.: Interannual variability in the peatland-atmosphere carbon dioxide exchange at an ombrotrophic bog, Global Biogeochem. Cy., 17, 1–14, https://doi.org/10.1029/2002gb001983, 2003. a
Laine, A. M., Korrensalo, A., and Tuittila, E. S.: Plant functional traits play the second fiddle to plant functional types in explaining peatland CO2 and CH4 gas exchange, Sci. Total Environ., 834, 155352, https://doi.org/10.1016/j.scitotenv.2022.155352, 2022. a
Li, T., Raivonen, M., Alekseychik, P., Aurela, M., Lohila, A., Zheng, X., Zhang, Q., Wang, G., Mammarella, I., Rinne, J., Yu, L., Xie, B., Vesala, T., and Zhang, W.: Importance of vegetation classes in modeling CH4 emissions from boreal and subarctic wetlands in Finland, Sci. Total Environ., 572, 1111–1122, https://doi.org/10.1016/j.scitotenv.2016.08.020, 2016. a
Lippmann, T. J. R., in 't Zandt, M. H., Van der Putten, N. N. L., Busschers, F. S., Hijma, M. P., van der Velden, P., de Groot, T., van Aalderen, Z., Meisel, O. H., Slomp, C. P., Niemann, H., Jetten, M. S. M., Dolman, H. A. J., and Welte, C. U.: Microbial activity, methane production, and carbon storage in Early Holocene North Sea peats, Biogeosciences, 18, 5491–5511, https://doi.org/10.5194/bg-18-5491-2021, 2021. a
Lippmann, T. J. R. and van Huissteden, J.: Peatland-VU-NUCOM (PVN 1.0): A peatland GHG emissions model using dynamic plant functional types, Zenodo, https://doi.org/10.5281/zenodo.7701698, 2023. a
Littleton, E. W., Harper, A. B., Vaughan, N. E., Oliver, R. J., Duran-Rojas, M. C., and Lenton, T. M.: JULES-BE: representation of bioenergy crops and harvesting in the Joint UK Land Environment Simulator vn5.1, Geosci. Model Dev., 13, 1123–1136, https://doi.org/10.5194/gmd-13-1123-2020, 2020. a
Loisel, J., Gallego-Sala, A. V., Amesbury, M. J., Magnan, G., Anshari, G., Beilman, D. W., Benavides, J. C., Blewett, J., Camill, P., Charman, D. J., Chawchai, S., Hedgpeth, A., Kleinen, T., Korhola, A., Large, D., Mansilla, C. A., Müller, J., van Bellen, S., West, J. B., Yu, Z., Bubier, J. L., Garneau, M., Moore, T., Sannel, A. B., Page, S., Väliranta, M., Bechtold, M., Brovkin, V., Cole, L. E., Chanton, J. P., Christensen, T. R., Davies, M. A., De Vleeschouwer, F., Finkelstein, S. A., Frolking, S., Gałka, M., Gandois, L., Girkin, N., Harris, L. I., Heinemeyer, A., Hoyt, A. M., Jones, M. C., Joos, F., Juutinen, S., Kaiser, K., Lacourse, T., Lamentowicz, M., Larmola, T., Leifeld, J., Lohila, A., Milner, A. M., Minkkinen, K., Moss, P., Naafs, B. D., Nichols, J., O'Donnell, J., Payne, R., Philben, M., Piilo, S., Quillet, A., Ratnayake, A. S., Roland, T. P., Sjögersten, S., Sonnentag, O., Swindles, G. T., Swinnen, W., Talbot, J., Treat, C., Valach, A. C., and Wu, J.: Expert assessment of future vulnerability of the global peatland carbon sink, Nat. Clim. Change, 11, 70–77, https://doi.org/10.1038/s41558-020-00944-0, 2021. a
Malmer, N., Albinsson, C., Svensson, B. M., and Wallén, B.: Interferences between Sphagnum and vascular plants: Effects on plant community structure and peat formation, Oikos, 100, 469–482, https://doi.org/10.1034/j.1600-0706.2003.12170.x, 2003. a
Malmer, N., Johansson, T., Olsrud, M., and Christensen, T. R.: Vegetation, climatic changes and net carbon sequestration in a North-Scandinavian subarctic mire over 30 years, Glob. Change Biol., 11, 1895–1909, https://doi.org/10.1111/j.1365-2486.2005.01042.x, 2005. a
Masson-Delmotte, V., Zhai, P., Pirani, A., Connors, S. L., Péan, C., Berger, S., Caud, N., Chen, Y., Goldfarb, L., Gomis, M. I., Huang, M., Leitzell, K., Lonnoy, E., Matthews, J. B. R., Maycock, T. K., Waterfield, T., Yelekçi, O., Yu, R., and Zhou, B. (Eds.): Climate Change 2021 – The Physical Science Basis, in: Climate Change 2021 – The Physical Science Basis Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA, 34, F0003–F0003, https://doi.org/10.1017/9781009157896, 2021. a
Mazzola, V., Perks, M. P., Smith, J., Yeluripati, J., and Xenakis, G.: Assessing soil carbon dioxide and methane fluxes from a Scots pine raised bog-edge-woodland, J. Environ. Manage., 302, 114061, https://doi.org/10.1016/j.jenvman.2021.114061, 2022. a
Melillo, J. M., Steudler, P. A., Aber, J. D., Newkirk, K., Lux, H., Bowles, F. P., Catricala, C., Magill, A., Ahrens, T., and Morrisseau, S.: Soil warming and carbon-cycle feedbacks to the climate system, Science, 298, 2173–2176, https://doi.org/10.1126/science.1074153, 2002. a
Melton, J. R., Wania, R., Hodson, E. L., Poulter, B., Ringeval, B., Spahni, R., Bohn, T., Avis, C. A., Beerling, D. J., Chen, G., Eliseev, A. V., Denisov, S. N., Hopcroft, P. O., Lettenmaier, D. P., Riley, W. J., Singarayer, J. S., Subin, Z. M., Tian, H., Zürcher, S., Brovkin, V., van Bodegom, P. M., Kleinen, T., Yu, Z. C., and Kaplan, J. O.: Present state of global wetland extent and wetland methane modelling: conclusions from a model inter-comparison project (WETCHIMP), Biogeosciences, 10, 753–788, https://doi.org/10.5194/bg-10-753-2013, 2013. a
Metzger, C., Jansson, P.-E., Lohila, A., Aurela, M., Eickenscheidt, T., Belelli-Marchesini, L., Dinsmore, K. J., Drewer, J., van Huissteden, J., and Drösler, M.: CO2 fluxes and ecosystem dynamics at five European treeless peatlands – merging data and process oriented modeling, Biogeosciences, 12, 125–146, https://doi.org/10.5194/bg-12-125-2015, 2015. a
Mi, Y., van Huissteden, J., Parmentier, F. J. W., Gallagher, A., Budishchev, A., Berridge, C. T., and Dolman, A. J.: Improving a plot-scale methane emission model and its performance at a northeastern Siberian tundra site, Biogeosciences, 11, 3985–3999, https://doi.org/10.5194/bg-11-3985-2014, 2014. a, b, c, d, e
Moore, T. R., Bubier, J. L., and Bledzki, L.: Litter decomposition in temperate peatland ecosystems: The effect of substrate and site, Ecosystems, 10, 949–963, https://doi.org/10.1007/s10021-007-9064-5, 2007. a
Morin, T. H., Bohrer, G., Frasson, R. P., Naor-Azreli, L., Mesi, S., Stefanik, K. C., and Schäfer, K. V.: Environmental drivers of methane fluxes from an urban temperate wetland park, J. Geophys. Res.-Biogeo., 119, 2188–2208, https://doi.org/10.1002/2014JG002750, 2014a. a
Morin, T. H., Bohrer, G., Naor-Azrieli, L., Mesi, S., Kenny, W. T., Mitsch, W. J., and Schäfer, K. V. R.: The seasonal and diurnal dynamics of methane flux at a created urban wetland, Ecol. Eng., 72, 74–83, https://doi.org/10.1016/j.ecoleng.2014.02.002, 2014b. a
Morin, T. H., Bohrer, G., Stefanik, K. C., Rey-Sanchez, A. C., Matheny, A. M., and Mitsch, W. J.: Combining eddy-covariance and chamber measurements to determine the methane budget from a small, heterogeneous urban floodplain wetland park, Agr. Forest Meteorol., 237-238, 160–170, https://doi.org/10.1016/j.agrformet.2017.01.022, 2017. a
Muñoz-Sabater, J., Dutra, E., Agustí-Panareda, A., Albergel, C., Arduini, G., Balsamo, G., Boussetta, S., Choulga, M., Harrigan, S., Hersbach, H., Martens, B., Miralles, D. G., Piles, M., Rodríguez-Fernández, N. J., Zsoter, E., Buontempo, C., and Thépaut, J.-N.: ERA5-Land: a state-of-the-art global reanalysis dataset for land applications, Earth Syst. Sci. Data, 13, 4349–4383, https://doi.org/10.5194/essd-13-4349-2021, 2021. a
Ostle, N. J., Smith, P., Fisher, R., Ian Woodward, F., Fisher, J. B., Smith, J. U., Galbraith, D., Levy, P., Meir, P., McNamara, N. P., and Bardgett, R. D.: Integrating plant-soil interactions into global carbon cycle models, J. Ecol., 97, 851–863, https://doi.org/10.1111/j.1365-2745.2009.01547.x, 2009. a
Pangala, S. R., Moore, S., Hornibrook, E. R., and Gauci, V.: Trees are major conduits for methane egress from tropical forested wetlands, New Phytol., 197, 524–531, https://doi.org/10.1111/nph.12031, 2013. a
Peltoniemi, K., Fritze, H., and Laiho, R.: Response of fungal and actinobacterial communities to water-level drawdown in boreal peatland sites, Soil Biol. Biochem., 41, 1902–1914, https://doi.org/10.1016/j.soilbio.2009.06.018, 2009. a
Puma, M. J., Koster, R. D., and Cook, B. I.: Phenological versus meteorological controls on land-atmosphere water and carbon fluxes, J. Geophys. Res.-Biogeo., 118, 14–29, https://doi.org/10.1029/2012JG002088, 2013. a
Saarnio, S., Wittenmayer, L., and Merbach, W.: Rhizospheric exudation of Eriophorum vaginatum L. – Potential link to methanogenesis, Plant Soil, 267, 343–355, https://doi.org/10.1007/s11104-005-0140-3, 2004. a
Saleska, S. R., Shaw, M. R., Fischer, M. L., Dunne, J. A., Still, C. J., Holman, M. L., and Harte, J.: Plant community composition mediates both large transient decline and predicted long-term recovery of soil carbon under climate warming, Global Biogeochem. Cy., 16, 3-1–3-18, https://doi.org/10.1029/2001gb001573, 2002. a
Schipper, L. A. and Reddy, K. R.: Determination of Methane Oxidation in the Rhizosphere of Sagittaria lancifolia Using Methyl Fluoride, Soil Sci. Soc. Am. J., 60, 611–616, https://doi.org/10.2136/sssaj1996.03615995006000020039x, 1996. a, b
Schrier-Uijl, A. P., Kroon, P. S., Hendriks, D. M. D., Hensen, A., Van Huissteden, J., Berendse, F., and Veenendaal, E. M.: Agricultural peatlands: towards a greenhouse gas sink – a synthesis of a Dutch landscape study, Biogeosciences, 11, 4559–4576, https://doi.org/10.5194/bg-11-4559-2014, 2014. a
Sitch, S., Smith, B., Prentice, I. C., Arneth, A., Bondeau, A., Cramer, W., Kaplan, J. O., Levis, S., Lucht, W., Sykes, M. T., Thonicke, K., and Venevsky, S.: Evaluation of ecosystem dynamics, plant geography and terrestrial carbon cycling in the LPJ dynamic global vegetation model, Glob. Change Biol., 9, 161–185, https://doi.org/10.1046/j.1365-2486.2003.00569.x, 2003. a
Smith, B., Prentice, I. C., and Sykes, M. T.: Representation of vegetation dynamics in the modelling of terrestrial ecosystems: comparing two contrasting approaches within European climate space, Global Ecol. Biogeogr., 10, 621–637, https://doi.org/10.1046/j.1466-822x.2001.t01-1-00256.x, 2001. a, b
Smithwick, E. A., Lucash, M. S., McCormack, M. L., and Sivandran, G.: Improving the representation of roots in terrestrial models, Ecol. Model., 291, 193–204, https://doi.org/10.1016/j.ecolmodel.2014.07.023, 2014. a, b
Speckman, H. N., Frank, J. M., Bradford, J. B., Miles, B. L., Massman, W. J., Parton, W. J., and Ryan, M. G.: Forest ecosystem respiration estimated from eddy covariance and chamber measurements under high turbulence and substantial tree mortality from bark beetles, Glob. Change Biol., 21, 708–721, https://doi.org/10.1111/gcb.12731, 2015. a
Strack, M., Waller, M. F., and Waddington, J. M.: Sedge succession and peatland methane dynamics: A potential feedback to climate change, Ecosystems, 9, 278–287, https://doi.org/10.1007/s10021-005-0070-1, 2006. a
Ström, L., Mastepanov, M., and Christensen, T. R.: Species-specific Effects of Vascular Plants on Carbon Turnover and Methane Emissions from Wetlands, Biogeochemistry, 75, 65–82, https://doi.org/10.1007/s10533-004-6124-1, 2005. a, b
Ström, L., Falk, J. M., Skov, K., Jackowicz-Korczynski, M., Mastepanov, M., Christensen, T. R., Lund, M., and Schmidt, N. M.: Controls of spatial and temporal variability in CH4 flux in a high arctic fen over three years, Biogeochemistry, 125, 21–35, https://doi.org/10.1007/s10533-015-0109-0, 2015. a
Tiemeyer, B., Albiac Borraz, E., Augustin, J., Bechtold, M., Beetz, S., Beyer, C., Drosler, M., Ebli, M., Eickenscheidt, T., Fiedler, S., Forster, C., Freibauer, A., Giebels, M., Glatzel, S., Heinichen, J., Hoffmann, M., Hoper, H., Jurasinski, G., Leiber-Sauheitl, K., Peichl-Brak, M., Rosskopf, N., Sommer, M., and Zeitz, J.: High emissions of greenhouse gases from grasslands on peat and other organic soils, Glob. Change Biol., 22, 4134–4149, https://doi.org/10.1111/gcb.13303, 2016. a
Toet, S., Cornelissen, J. H., Aerts, R., Van Logtestijn, R. S., De Beus, M., and Stoevelaar, R.: Moss responses to elevated CO2 and variation in hydrology in a temperate lowland peatland, Plant Ecol., 182, 27–40, https://doi.org/10.1007/s11258-005-9029-8, 2006. a
Tramontana, G., Jung, M., Schwalm, C. R., Ichii, K., Camps-Valls, G., Ráduly, B., Reichstein, M., Arain, M. A., Cescatti, A., Kiely, G., Merbold, L., Serrano-Ortiz, P., Sickert, S., Wolf, S., and Papale, D.: Predicting carbon dioxide and energy fluxes across global FLUXNET sites with regression algorithms, Biogeosciences, 13, 4291–4313, https://doi.org/10.5194/bg-13-4291-2016, 2016. a
Van den Hoof, C., Hanert, E., and Vidale, P. L.: Simulating dynamic crop growth with an adapted land surface model – JULES-SUCROS: Model development and validation, Agr. Forest Meteorol., 151, 137–153, https://doi.org/10.1016/j.agrformet.2010.09.011, 2011. a
van Geel, B., Bos, J. M., and Pals, J. P.: Archaeological and palaeoecological aspects of a medieval house terp in a reclaimed raiseg bog area in North Holland, Ber. Rijksd. Oudheidkd. Bodemonderz, 33, 419–444, 1983. a
van Huissteden, J., Petrescu, A. M. R., Hendriks, D. M. D., and Rebel, K. T.: Sensitivity analysis of a wetland methane emission model based on temperate and arctic wetland sites, Biogeosciences, 6, 3035–3051, https://doi.org/10.5194/bg-6-3035-2009, 2009. a, b
Waddington, J. M. and Roulet, N. T.: Carbon balance of a Boreal patterned peatland, Glob. Change Biol., 6, 87–97, https://doi.org/10.1046/j.1365-2486.2000.00283.x, 2000. a
Waldo, N. B., Hunt, B. K., Fadely, E. C., Moran, J. J., and Neumann, R. B.: Plant root exudates increase methane emissions through direct and indirect pathways, Biogeochemistry, 145, 213–234, https://doi.org/10.1007/s10533-019-00600-6, 2019. a
Walter, B. P. and Heimann, M.: A process-based, climate-sensitive model to derive methane emissions from natural wetlands: Application to five wetland sites, sensitivity to model parameters, and climate, Global Biogeochem. Cy., 14, 745–765, https://doi.org/10.1029/1999GB001204, 2000. a, b, c, d, e, f
Wania, R., Ross, I., and Prentice, I. C.: Implementation and evaluation of a new methane model within a dynamic global vegetation model: LPJ-WHyMe v1.3.1, Geosci. Model Dev., 3, 565–584, https://doi.org/10.5194/gmd-3-565-2010, 2010. a, b
Wania, R., Melton, J. R., Hodson, E. L., Poulter, B., Ringeval, B., Spahni, R., Bohn, T., Avis, C. A., Chen, G., Eliseev, A. V., Hopcroft, P. O., Riley, W. J., Subin, Z. M., Tian, H., van Bodegom, P. M., Kleinen, T., Yu, Z. C., Singarayer, J. S., Zürcher, S., Lettenmaier, D. P., Beerling, D. J., Denisov, S. N., Prigent, C., Papa, F., and Kaplan, J. O.: Present state of global wetland extent and wetland methane modelling: methodology of a model inter-comparison project (WETCHIMP), Geosci. Model Dev., 6, 617–641, https://doi.org/10.5194/gmd-6-617-2013, 2013. a
WGI: Climate Change 2021 The Physical Science Basis WGI, vol. 34, John Wiley and Sons Ltd., ISBN 9781009157896, 2021. a
Whipps, J. M.: Carbon economy, The rhizosphere, 59–97, 1990. a
Wu, Y. and Blodau, C.: PEATBOG: a biogeochemical model for analyzing coupled carbon and nitrogen dynamics in northern peatlands, Geosci. Model Dev., 6, 1173–1207, https://doi.org/10.5194/gmd-6-1173-2013, 2013. a, b
WWu, Y., Verseghy, D. L., and Melton, J. R.: Integrating peatlands into the coupled Canadian Land Surface Scheme (CLASS) v3.6 and the Canadian Terrestrial Ecosystem Model (CTEM) v2.0, Geosci. Model Dev., 9, 2639–2663, https://doi.org/10.5194/gmd-9-2639-2016, 2016. a
Wullschleger, S. D., Epstein, H. E., Box, E. O., Euskirchen, E. S., Goswami, S., Iversen, C. M., Kattge, J., Norby, R. J., Van Bodegom, P. M., and Xu, X.: Plant functional types in Earth system models: Past experiences and future directions for application of dynamic vegetation models in high-latitude ecosystems, Ann. Bot., 114, 1–16, https://doi.org/10.1093/aob/mcu077, 2014. a
Yrjälä, K., Tuomivirta, T., Juottonen, H., Putkinen, A., Lappi, K., Tuittila, E. S., Penttilä, T., Minkkinen, K., Laine, J., Peltoniemi, K., and Fritze, H.: CH4 production and oxidation processes in a boreal fen ecosystem after long-term water table drawdown, Glob. Change Biol., 17, 1311–1320, https://doi.org/10.1111/j.1365-2486.2010.02290.x, 2011. a
Yu, Z., Loisel, J., Brosseau, D. P., Beilman, D. W., and Hunt, S. J.: Global peatland dynamics since the Last Glacial Maximum, Geophys. Res. Lett., 37, 1–5, https://doi.org/10.1029/2010GL043584, 2010. a
Zeng, X.: Global Vegetation Root Distribution for Land Modeling, J. Hydrometeorol., 2, 525–530, https://doi.org/10.1175/1525-7541(2001)002<0525:gvrdfl>2.0.co;2, 2001. a
Zhao, J., Lange, H., and Meissner, H.: Gap-filling continuously-measured soil respiration data: A highlight of time-series-based methods, Agr. Forest Meteorol., 285–286, 107912, https://doi.org/10.1016/j.agrformet.2020.107912, 2020. a
Short summary
Vegetation is a critical component of carbon storage in peatlands but an often-overlooked concept in many peatland models. We developed a new model capable of simulating the response of vegetation to changing environments and management regimes. We evaluated the model against observed chamber data collected at two peatland sites. We found that daily air temperature, water level, harvest frequency and height, and vegetation composition drive methane and carbon dioxide emissions.
Vegetation is a critical component of carbon storage in peatlands but an often-overlooked...
