Articles | Volume 16, issue 18
https://doi.org/10.5194/gmd-16-5339-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-16-5339-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Development and technical paper
| 
19 Sep 2023
Development and technical paper |
| 19 Sep 2023
| 19 Sep 2023
A comparison of Eulerian and Lagrangian methods for vertical particle transport in the water column
SINTEF Ocean AS, Trondheim, Norway
Department of Physics, Norwegian University of Science and Technology, Trondheim, Norway
Ruben Kristiansen
Department of Physics, Norwegian University of Science and Technology, Trondheim, Norway
Raymond Nepstad
SINTEF Ocean AS, Trondheim, Norway
Erik van Sebille
Institute for Marine and Atmospheric Research, Utrecht University, Utrecht, the Netherlands
Andy M. Booth
SINTEF Ocean AS, Trondheim, Norway
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A common task in applied oceanography is to calculate the trajectories of floating objects in the ocean. We propose an alteration to some common numerical methods to improve their performance in such computations, and compare results with and without this alteration. This will help researchers to ensure they obtain a higher accuracy in their results without compromising on computer resources.
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In applied oceanography, a common task is to calculate the trajectory of objects floating at the sea surface or submerged in the water. We have investigated different numerical methods for doing such calculations and discuss the benefits and challenges of some common methods. We then propose a small change to some common methods that make them more efficient for this particular application. This will allow researchers to obtain more accurate answers with fewer computer resources.
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Tor Nordam and Rodrigo Duran
Geosci. Model Dev., 13, 5935–5957, https://doi.org/10.5194/gmd-13-5935-2020, https://doi.org/10.5194/gmd-13-5935-2020, 2020
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In applied oceanography, a common task is to calculate the trajectory of objects floating at the sea surface or submerged in the water. We have investigated different numerical methods for doing such calculations and discuss the benefits and challenges of some common methods. We then propose a small change to some common methods that make them more efficient for this particular application. This will allow researchers to obtain more accurate answers with fewer computer resources.
Linda K. Dämmer, Lennart de Nooijer, Erik van Sebille, Jan G. Haak, and Gert-Jan Reichart
Clim. Past, 16, 2401–2414, https://doi.org/10.5194/cp-16-2401-2020, https://doi.org/10.5194/cp-16-2401-2020, 2020
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David Wichmann, Christian Kehl, Henk A. Dijkstra, and Erik van Sebille
Nonlin. Processes Geophys., 27, 501–518, https://doi.org/10.5194/npg-27-501-2020, https://doi.org/10.5194/npg-27-501-2020, 2020
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Mirjam van der Mheen, Erik van Sebille, and Charitha Pattiaratchi
Ocean Sci., 16, 1317–1336, https://doi.org/10.5194/os-16-1317-2020, https://doi.org/10.5194/os-16-1317-2020, 2020
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beachand end up on coastlines throughout the Indian Ocean. Coastlines where a lot of plastic enters the ocean are heavily affected by beaching plastic, but plastics can also beach far from the source on remote islands and countries that contribute little plastic pollution of their own.
Erik van Sebille, Philippe Delandmeter, John Schofield, Britta Denise Hardesty, Jen Jones, and Andy Donnelly
Ocean Sci., 15, 1341–1349, https://doi.org/10.5194/os-15-1341-2019, https://doi.org/10.5194/os-15-1341-2019, 2019
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Philippe Delandmeter and Erik van Sebille
Geosci. Model Dev., 12, 3571–3584, https://doi.org/10.5194/gmd-12-3571-2019, https://doi.org/10.5194/gmd-12-3571-2019, 2019
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Parcels is a framework to compute how ocean currents transport
stuffsuch as plankton and plastic around. In the latest version 2.0 of Parcels, we focus on more accurate interpolation schemes and implement methods to seamlessly combine data from different sources (such as winds and currents, possibly in different regions). We show that this framework is very efficient for tracking how microplastic is transported through the North Sea into the Arctic.
Johannes Röhrs, Knut-Frode Dagestad, Helene Asbjørnsen, Tor Nordam, Jørgen Skancke, Cathleen E. Jones, and Camilla Brekke
Ocean Sci., 14, 1581–1601, https://doi.org/10.5194/os-14-1581-2018, https://doi.org/10.5194/os-14-1581-2018, 2018
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Simulations of hypothetical oil spills are presented to investigate how the vertical mixing of oil affects transport towards various directions. It is shown that the horizontal transport of oil greatly varies for different oil types and weather conditions. These differences are a consequence of the entrainment of oil from the surface into the ocean. While oil spills often get entrained into the water by waves, we show that submerged oil typically resurfaces after a few hours or days.
Fabrice Ardhuin, Yevgueny Aksenov, Alvise Benetazzo, Laurent Bertino, Peter Brandt, Eric Caubet, Bertrand Chapron, Fabrice Collard, Sophie Cravatte, Jean-Marc Delouis, Frederic Dias, Gérald Dibarboure, Lucile Gaultier, Johnny Johannessen, Anton Korosov, Georgy Manucharyan, Dimitris Menemenlis, Melisa Menendez, Goulven Monnier, Alexis Mouche, Frédéric Nouguier, George Nurser, Pierre Rampal, Ad Reniers, Ernesto Rodriguez, Justin Stopa, Céline Tison, Clément Ubelmann, Erik van Sebille, and Jiping Xie
Ocean Sci., 14, 337–354, https://doi.org/10.5194/os-14-337-2018, https://doi.org/10.5194/os-14-337-2018, 2018
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The Sea surface KInematics Multiscale (SKIM) monitoring mission is a proposal for a future satellite that is designed to measure ocean currents and waves. Using a Doppler radar, the accurate measurement of currents requires the removal of the mean velocity due to ocean wave motions. This paper describes the main processing steps needed to produce currents and wave data from the radar measurements. With this technique, SKIM can provide unprecedented coverage and resolution, over the global ocean.
Michael Lange and Erik van Sebille
Geosci. Model Dev., 10, 4175–4186, https://doi.org/10.5194/gmd-10-4175-2017, https://doi.org/10.5194/gmd-10-4175-2017, 2017
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Here, we present version 0.9 of Parcels (Probably A Really Computationally Efficient Lagrangian Simulator). Parcels is an experimental prototype code aimed at exploring novel approaches for Lagrangian tracking of virtual ocean particles in the petascale age. The modularity, flexibility and scalability will allow the code to be used to track water, nutrients, microbes, plankton, plastic and even fish.
Chris S. M. Turney, Christopher J. Fogwill, Jonathan G. Palmer, Erik van Sebille, Zoë Thomas, Matt McGlone, Sarah Richardson, Janet M. Wilmshurst, Pavla Fenwick, Violette Zunz, Hugues Goosse, Kerry-Jayne Wilson, Lionel Carter, Mathew Lipson, Richard T. Jones, Melanie Harsch, Graeme Clark, Ezequiel Marzinelli, Tracey Rogers, Eleanor Rainsley, Laura Ciasto, Stephanie Waterman, Elizabeth R. Thomas, and Martin Visbeck
Clim. Past, 13, 231–248, https://doi.org/10.5194/cp-13-231-2017, https://doi.org/10.5194/cp-13-231-2017, 2017
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The Southern Ocean plays a fundamental role in global climate but suffers from a dearth of observational data. As the Australasian Antarctic Expedition 2013–2014 we have developed the first annually resolved temperature record using trees from subantarctic southwest Pacific (52–54˚S) to extend the climate record back to 1870. With modelling we show today's high climate variability became established in the ~1940s and likely driven by a Rossby wave response originating from the tropical Pacific.
Christopher J. Fogwill, Erik van Sebille, Eva A. Cougnon, Chris S. M. Turney, Steve R. Rintoul, Benjamin K. Galton-Fenzi, Graeme F. Clark, E. M. Marzinelli, Eleanor B. Rainsley, and Lionel Carter
The Cryosphere, 10, 2603–2609, https://doi.org/10.5194/tc-10-2603-2016, https://doi.org/10.5194/tc-10-2603-2016, 2016
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Here we report new data from in situ oceanographic surveys and high-resolution ocean modelling experiments in the Commonwealth Bay region of East Antarctica, where in 2010 there was a major reconfiguration of the regional icescape due to the collision of the 97 km long iceberg B09B with the Mertz Glacier tongue. Here we compare post-calving observations with high-resolution ocean modelling which suggest that this reconfiguration has led to the development of a new polynya off Commonwealth Bay.
Paulina Cetina-Heredia, Erik van Sebille, Richard Matear, and Moninya Roughan
Biogeosciences Discuss., https://doi.org/10.5194/bg-2016-53, https://doi.org/10.5194/bg-2016-53, 2016
Revised manuscript not accepted
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Characterizing phytoplankton growth influences fisheries and climate. We use a lagrangian approach to identify phytoplankton blooms in the Great Australian Bight (GAB), and associate them with nitrate sources. We find that 88 % of the nitrate utilized in blooms is originated between the GAB and the SubAntarctic Front. Large nitrate concentrations are supplied at depth but do not reach the euphotic zone often. As a result, 55 % of blooms utilize nitrate supplied in the top 100 m.
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Development and preliminary validation of a land surface image assimilation system based on the Common Land Model
NorSand4AI: a comprehensive triaxial test simulation database for NorSand constitutive model materials
ParticleDA.jl v.1.0: a distributed particle-filtering data assimilation package
HETerogeneous vectorized or Parallel (HETPv1.0): an updated inorganic heterogeneous chemistry solver for the metastable-state NH4+–Na+–Ca2+–K+–Mg2+–SO42−–NO3−–Cl−–H2O system based on ISORROPIA II
Three-dimensional geological modelling of igneous intrusions in LoopStructural v1.5.10
Estimating volcanic ash emissions using retrieved satellite ash columns and inverse ash transport modeling using VolcanicAshInversion v1.2.1, within the operational eEMEP (emergency European Monitoring and Evaluation Programme) volcanic plume forecasting system (version rv4_17)
Accounting for uncertainties in forecasting tropical-cyclone-induced compound flooding
An automatic mesh generator for coupled 1D–2D hydrodynamic models
Numerical coupling of aerosol emissions, dry removal, and turbulent mixing in the E3SM Atmosphere Model version 1 (EAMv1) – Part 1: Dust budget analyses and the impacts of a revised coupling scheme
Numerical coupling of aerosol emissions, dry removal, and turbulent mixing in the E3SM Atmosphere Model version 1 (EAMv1) – Part 2: A semi-discrete error analysis framework for assessing coupling schemes
jsmetrics v0.2.0: a Python package for metrics and algorithms used to identify or characterise atmospheric jet streams
P3D-BRNS v1.0.0: a three-dimensional, multiphase, multicomponent, pore-scale reactive transport modelling package for simulating biogeochemical processes in subsurface environments
MinVoellmy v1: a lightweight model for simulating rapid mass movements based on a modified Voellmy rheology
Scalable Feature Extraction and Tracking (SCAFET): a general framework for feature extraction from large climate data sets
Sweep interpolation: a cost-effective semi-Lagrangian scheme in the Global Environmental Multiscale model
CHONK 1.0: landscape evolution framework: cellular automata meets graph theory
Perspectives of physics-based machine learning strategies for geoscientific applications governed by partial differential equations
Xiong Tang, Wei Liu, Siming He, Lei Zhu, Michel Jaboyedoff, Huanhuan Zhang, Yuqing Sun, and Zenan Huo
Geosci. Model Dev., 18, 4743–4758, https://doi.org/10.5194/gmd-18-4743-2025, https://doi.org/10.5194/gmd-18-4743-2025, 2025
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The paper presents an explicit stabilized two-phase material point method (MPM) based on the one-point two-phase MPM scheme. The novelty of the work lies in the employment of stabilized techniques, including the strain smoothing method and the multi-field variational principle. With its effective and easy-to-implement stabilized techniques, the proposed model offers an effective and reliable approach for simulating both static and dynamic processes in solid–fluid porous media.
Joshua Hope-Collins, Abdalaziz Hamdan, Werner Bauer, Lawrence Mitchell, and Colin Cotter
Geosci. Model Dev., 18, 4535–4569, https://doi.org/10.5194/gmd-18-4535-2025, https://doi.org/10.5194/gmd-18-4535-2025, 2025
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Effectively using modern supercomputers requires massively parallel algorithms. Time-parallel algorithms calculate the system state (e.g. the atmosphere) at multiple times simultaneously and have exciting potential but are tricky to implement and still require development. We have developed software to simplify implementing and testing the ParaDiag algorithm on supercomputers. We show that for some atmospheric problems it can enable faster or more accurate solutions than traditional techniques.
Raphael Dreger, Timo Kirfel, Andrea Pozzer, Simon Rosanka, Rolf Sander, and Domenico Taraborrelli
Geosci. Model Dev., 18, 4273–4291, https://doi.org/10.5194/gmd-18-4273-2025, https://doi.org/10.5194/gmd-18-4273-2025, 2025
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Model simulations are essential for understanding the interactions between atmospheric composition and weather. However, models including chemistry are very slow. Hence, any computation speedup of such models is important for understanding the role of atmospheric chemistry within the Earth system. In this study we analyzed and optimized the time step for chemistry calculations. Our results show that atmospheric models could be run notably faster without any loss in accuracy.
John Thuburn
Geosci. Model Dev., 18, 3331–3357, https://doi.org/10.5194/gmd-18-3331-2025, https://doi.org/10.5194/gmd-18-3331-2025, 2025
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A new computational fluid dynamics code for simulating the atmospheric boundary layer and convection is presented. Moist thermodynamics is formulated via thermodynamic potentials, avoiding inconsistencies that can be introduced with conventional approaches. Numerical methods typical of weather and climate models are used, with no explicit subgrid scheme. Results highlight some advantages (e.g. large time steps) and disadvantages (e.g. weak vertical fluxes near the surface) of this approach.
Benjamin C. Sapper, Sean Youn, Daven K. Henze, Manjula Canagaratna, Harald Stark, and Jose L. Jimenez
Geosci. Model Dev., 18, 2891–2919, https://doi.org/10.5194/gmd-18-2891-2025, https://doi.org/10.5194/gmd-18-2891-2025, 2025
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Positive matrix factorization (PMF) has been used by atmospheric scientists to extract underlying factors present in large datasets. This paper presents a new technique for error-weighted PMF that drastically reduces the computational costs of previously developed algorithms. We use this technique to deliver interpretable factors and solution diagnostics from an atmospheric chemistry dataset.
Xianghui Dong, Qingxiang Liu, Stefan Zieger, Alberto Alberello, Ali Abdolali, Jian Sun, Kejian Wu, and Alexander V. Babanin
EGUsphere, https://doi.org/10.5194/egusphere-2025-698, https://doi.org/10.5194/egusphere-2025-698, 2025
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Ocean surface wave research is vital for coastal management, marine ecology, and ocean engineering. This study simulates waves along the Australian coast using advanced physical and numerical schemes. Model verification with altimeter and buoy data shows good performance. A two-step parameterization improves accuracy in the complex Great Barrier Reef. This study will help us better understand coastal wave climates and assess sea states, enabling us to better develop, protect, and use the sea.
Stefania Renna, Francesco Granella, Lara Aleluia Reis, and Paulina Schulz-Antipa
Geosci. Model Dev., 18, 2373–2408, https://doi.org/10.5194/gmd-18-2373-2025, https://doi.org/10.5194/gmd-18-2373-2025, 2025
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The Country Level Air Quality Calculator (CLAQC) is a new fast modeling tool that predicts globally country-level monthly and annual concentrations of two major air pollutants, fine particulate matter (PM2.5) and tropospheric ozone (O3). It was designed to inform national and regional climate and pollution mitigation policies. It is easy to use and computationally efficient, allowing for the simulation of a large number of emission scenarios for policy assessments and optimization frameworks.
Joshua M. Wolstenholme, Christopher J. Skinner, David Milan, Robert E. Thomas, and Daniel R. Parsons
Geosci. Model Dev., 18, 1395–1411, https://doi.org/10.5194/gmd-18-1395-2025, https://doi.org/10.5194/gmd-18-1395-2025, 2025
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Leaky wooden dams are a type of natural flood management intervention that aims to reduce flood risk downstream by temporarily holding back water during a storm event and releasing it afterwards. These structures alter the river hydrology, and therefore the geomorphology, yet often this is excluded from numerical models. Here we show that by not simulating geomorphology, we are currently underestimating the efficacy of these structures to reduce the flood peak and store water.
Jiayi Lai, Lanning Wang, Qizhong Wu, Yizhou Yang, and Fang Wang
Geosci. Model Dev., 18, 1089–1102, https://doi.org/10.5194/gmd-18-1089-2025, https://doi.org/10.5194/gmd-18-1089-2025, 2025
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High-performance computing limitations often hinder numerical model development. Traditional models use double precision for accuracy, which is computationally expensive. Lower precision reduces costs but can introduce errors. The quasi-double-precision (QDP) algorithm helps mitigate these errors. This study applies the QDP algorithm to the Model for Prediction Across Scales – Atmosphere, showing reduced errors and computational time, making it an efficient solution for large-scale simulations.
Marieke Wesselkamp, Matthew Chantry, Ewan Pinnington, Margarita Choulga, Souhail Boussetta, Maria Kalweit, Joschka Bödecker, Carsten F. Dormann, Florian Pappenberger, and Gianpaolo Balsamo
Geosci. Model Dev., 18, 921–937, https://doi.org/10.5194/gmd-18-921-2025, https://doi.org/10.5194/gmd-18-921-2025, 2025
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We compared spatiotemporal forecasts of three machine learning models that learned water and energy
states on the land surface from a physical model scheme. The forecasting models were developed with reanalysis data and simulations on a European scale and transferred to the globe. We found that all approaches deliver highly accurate approximations of the physical dynamic at long time horizons, implying their usefulness to advance land surface forecasting with synthetic data.
states on the land surface from a physical model scheme. The forecasting models were developed with reanalysis data and simulations on a European scale and transferred to the globe. We found that all approaches deliver highly accurate approximations of the physical dynamic at long time horizons, implying their usefulness to advance land surface forecasting with synthetic data.
Maarten van Ormondt, Tim Leijnse, Roel de Goede, Kees Nederhoff, and Ap van Dongeren
Geosci. Model Dev., 18, 843–861, https://doi.org/10.5194/gmd-18-843-2025, https://doi.org/10.5194/gmd-18-843-2025, 2025
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Accurate flood risk assessments are crucial for storm protection. To achieve efficiency, computational costs must be minimized. This paper introduces a novel subgrid approach for linear inertial equations (LIEs) with bed level and friction variations, implemented in the Super-Fast INundation of CoastS (SFINCS) model. Pre-processed lookup tables enhance simulation precision with lower costs. Validations show significant accuracy improvement even at coarser resolutions.
Chayan Banerjee, Kien Nguyen, Clinton Fookes, Gregory Hancock, and Thomas Coulthard
Geosci. Model Dev., 18, 803–818, https://doi.org/10.5194/gmd-18-803-2025, https://doi.org/10.5194/gmd-18-803-2025, 2025
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In geosciences, the reliance on numerical models necessitates the precise calibration of their parameters to effectively translate information from observed to unobserved settings. We introduce a generalizable framework for calibrating numerical models, with a case study of the geomorphological model CAESAR-Lisflood. This approach efficiently identifies the optimal set of parameters for a given numerical model, enabling retrospective and prospective analyses at various temporal resolutions.
Zereng Chen, Qinghe Zhang, Guoquan Ran, and Yang Nie
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-240, https://doi.org/10.5194/gmd-2024-240, 2025
Revised manuscript accepted for GMD
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This study presents the development of a novel three-dimensional discontinuous Galerkin coastal and estuarine modelling system, DGCEMS. The model have low spurious mixing, a second-order convergence of surface water elevation, horizontal velocity and tracer field. It has the capability to simulate salt-freshwater interactions in the presence of wetting and drying boundaries.
Yuta Kawai and Hirofumi Tomita
Geosci. Model Dev., 18, 725–762, https://doi.org/10.5194/gmd-18-725-2025, https://doi.org/10.5194/gmd-18-725-2025, 2025
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When considering future high-resolution atmospheric simulations with O(10–100 m) grid spacing, such as global large-eddy simulations, numerical errors with the conventional low-order dynamical cores can contaminate the effects of turbulent parameterization. To achieve high-order discretization, we developed a global atmospheric dynamical core using the discontinuous Galerkin method (DGM). By conducting several validation tests, we discussed the impact of a high-order DGM on atmospheric flows.
Tongtiegang Zhao, Qiang Li, Tongbi Tu, and Xiaohong Chen
EGUsphere, https://doi.org/10.5194/egusphere-2025-3, https://doi.org/10.5194/egusphere-2025-3, 2025
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The recent WeatherBench 2 provides a versatile framework for the verification of deterministic and ensemble forecasts. In this paper, we present an explicit extension to binary forecasts of hydroclimatic extremes. Sixteen verification metrics for binary forecasts are employed and scorecards are generated to showcase the predictive performance. The extension facilitates more comprehensive comparisons of hydroclimatic forecasts and provides useful information for forecast applications.
Malena Sabaté Landman, Julianne Chung, Jiahua Jiang, Scot M. Miller, and Arvind K. Saibaba
Geosci. Model Dev., 17, 8853–8872, https://doi.org/10.5194/gmd-17-8853-2024, https://doi.org/10.5194/gmd-17-8853-2024, 2024
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Making an informed decision about what prior information to incorporate or discard in an inverse model is important yet very challenging, as it is often not straightforward to distinguish between informative and non-informative variables. In this study, we develop a new approach for incorporating prior information in an inverse model using predictor variables, while simultaneously selecting the relevant predictor variables for the estimation of the unknown quantity of interest.
Joonlee Lee, Myong-In Lee, Sunlae Tak, Eunkyo Seo, and Yong-Keun Lee
Geosci. Model Dev., 17, 8799–8816, https://doi.org/10.5194/gmd-17-8799-2024, https://doi.org/10.5194/gmd-17-8799-2024, 2024
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We developed an advanced snow water equivalent (SWE) data assimilation framework using satellite data based on a land surface model. The results of this study highlight the beneficial impact of data assimilation by effectively combining land surface model and satellite-derived data according to their relative uncertainty, thereby controlling not only transitional regions but also the regions with heavy snow accumulation that are difficult to detect by satellite.
Frédéric Parrenin, Marie Bouchet, Christo Buizert, Emilie Capron, Ellen Corrick, Russell Drysdale, Kenji Kawamura, Amaëlle Landais, Robert Mulvaney, Ikumi Oyabu, and Sune Olander Rasmussen
Geosci. Model Dev., 17, 8735–8750, https://doi.org/10.5194/gmd-17-8735-2024, https://doi.org/10.5194/gmd-17-8735-2024, 2024
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The Paleochrono-1.1 probabilistic dating model allows users to derive a common and optimized chronology for several paleoclimatic sites from various archives (ice cores, speleothems, marine cores, lake cores, etc.). It combines prior sedimentation scenarios with chronological information such as dated horizons, dated intervals, stratigraphic links and (for ice cores) Δdepth observations. Paleochrono-1.1 is available under an open-source license.
Yuan Li, Timothy Davis, Adina E. Pusok, and Richard F. Katz
EGUsphere, https://doi.org/10.5194/egusphere-2024-3504, https://doi.org/10.5194/egusphere-2024-3504, 2024
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Magmatic dykes transport magma to the Earth's surface, sometimes causing eruptions. We advanced a model of dyking, treating it as plastic deformation in a porous medium, unlike the classic model that treats dykes as fractures in elastic solids. Comparing the two, we found the plastic model aligns with the fracture model in dyke speed and energy consumption, despite quantitative differences. This new method could be a powerful tool for understanding volcanic processes during tectonic activity.
Jeffrey H. Curtis, Nicole Riemer, and Matthew West
Geosci. Model Dev., 17, 8399–8420, https://doi.org/10.5194/gmd-17-8399-2024, https://doi.org/10.5194/gmd-17-8399-2024, 2024
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This paper introduces a numerical method for simulating particle-based aerosol transport in atmospheric models. We detail the various numerical properties of the advection order method and demonstrate its implementation in a 3D weather prediction model (WRF) for the first time. Particle-based techniques improve the accuracy of aerosol size and composition predictions, which are key for aerosol–cloud and aerosol–radiation interactions.
Léonard Moracchini, Guillaume Pirot, Kerry Bardot, Mark W. Jessell, and James L. McCallum
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-154, https://doi.org/10.5194/gmd-2024-154, 2024
Revised manuscript accepted for GMD
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To facilitate the exploration of alternative hydrogeological scenarios, we propose to approximate costly physical simulations of contaminant transport by more affordable shortest distances computations. It enables to accept or reject scenarios within a predefined confidence interval. In particular, it can allow to estimate the probability of a fault acting as a preferential path or a barrier.
Matt J. Fischer
Geosci. Model Dev., 17, 6745–6760, https://doi.org/10.5194/gmd-17-6745-2024, https://doi.org/10.5194/gmd-17-6745-2024, 2024
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In paleoclimate research, proxy system models (PSMs) model chemical or biological systems which receive environmental input and output (e.g., geochemical signals). The environmental inputs are rarely noiseless, which causes problems when calibrating multi-input PSMs. Here a PSM is developed which includes generalized noise in both model inputs and outputs and prior information. A quasi-Bayesian method enhances the stability of the solution of the Measurement Error Proxy System Model.
Gong Cheng, Mathieu Morlighem, and G. Hilmar Gudmundsson
Geosci. Model Dev., 17, 6227–6247, https://doi.org/10.5194/gmd-17-6227-2024, https://doi.org/10.5194/gmd-17-6227-2024, 2024
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We conducted a comprehensive analysis of the stabilization and reinitialization techniques currently employed in ISSM and Úa for solving level-set equations, specifically those related to the dynamic representation of moving ice fronts within numerical ice sheet models. Our results demonstrate that the streamline upwind Petrov–Galerkin (SUPG) method outperforms the other approaches. We found that excessively frequent reinitialization can lead to exceptionally high errors in simulations.
Hugo Dominguez, Nicolas Riel, and Pierre Lanari
Geosci. Model Dev., 17, 6105–6122, https://doi.org/10.5194/gmd-17-6105-2024, https://doi.org/10.5194/gmd-17-6105-2024, 2024
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Predicting the behaviour of magmatic systems is important for understanding Earth's matter and heat transport. Numerical modelling is a technique that can predict complex systems at different scales of space and time by solving equations using various techniques. This study tests four algorithms to find the best way to transport the melt composition. The "weighted essentially non-oscillatory" algorithm emerges as the best choice, minimising errors and preserving system mass well.
Reuben W. Nixon-Hill, Daniel Shapero, Colin J. Cotter, and David A. Ham
Geosci. Model Dev., 17, 5369–5386, https://doi.org/10.5194/gmd-17-5369-2024, https://doi.org/10.5194/gmd-17-5369-2024, 2024
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Scientists often use models to study complex processes, like the movement of ice sheets, and compare them to measurements for estimating quantities that are hard to measure. We highlight an approach that ensures accurate results from point data sources (e.g. height measurements) by evaluating the numerical solution at true point locations. This method improves accuracy, aids communication between scientists, and is well-suited for integration with specialised software that automates processes.
Swen Metzger, Samuel Rémy, Jason E. Williams, Vincent Huijnen, and Johannes Flemming
Geosci. Model Dev., 17, 5009–5021, https://doi.org/10.5194/gmd-17-5009-2024, https://doi.org/10.5194/gmd-17-5009-2024, 2024
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EQSAM4Clim has recently been revised to provide an accurate and efficient method for calculating the acidity of atmospheric particles. It is based on an analytical concept that is sufficiently fast and free of numerical noise, which makes it attractive for air quality forecasting. Version 12 allows the calculation of aerosol composition based on the gas–liquid–solid and the reduced gas–liquid partitioning with the associated water uptake for both cases, including the acidity of the aerosols.
Niko Schmidt, Angelika Humbert, and Thomas Slawig
Geosci. Model Dev., 17, 4943–4959, https://doi.org/10.5194/gmd-17-4943-2024, https://doi.org/10.5194/gmd-17-4943-2024, 2024
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Future sea-level rise is of big significance for coastal regions. The melting and acceleration of glaciers plays a major role in sea-level change. Computer simulation of glaciers costs a lot of computational resources. In this publication, we test a new way of simulating glaciers. This approach produces the same results but has the advantage that it needs much less computation time. As simulations can be obtained with fewer computation resources, higher resolution and physics become affordable.
Jevgenijs Steinbuks, Yongyang Cai, Jonas Jaegermeyr, and Thomas W. Hertel
Geosci. Model Dev., 17, 4791–4819, https://doi.org/10.5194/gmd-17-4791-2024, https://doi.org/10.5194/gmd-17-4791-2024, 2024
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This paper applies a cutting-edge numerical method, SCEQ, to show how uncertain climate change and technological progress affect the future utilization of the world's scarce land resources. The paper's key insight is to illustrate how much global cropland will expand when future crop yields are unknown. The study finds the range of outcomes for land use change to be smaller when using this novel method compared to existing deterministic models.
Rozan Rosandi, Yudi Rosandi, and Bernd Simeon
EGUsphere, https://doi.org/10.5194/egusphere-2024-1093, https://doi.org/10.5194/egusphere-2024-1093, 2024
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We model Earth's lithosphere as a thin elastic shell and present numerical methods of isogeometric finite element analysis to simulate its deformation in isostatic equilibrium using technologies from computer-aided design. The simulations also serve as a basis for identifying parameters of the model that are most plausible to explain observed data. This research has been done to showcase the capabilities of isogeometric analysis in solving higher-order problems in geoscientific applications.
Gianandrea Mannarini, Mario Leonardo Salinas, Lorenzo Carelli, Nicola Petacco, and Josip Orović
Geosci. Model Dev., 17, 4355–4382, https://doi.org/10.5194/gmd-17-4355-2024, https://doi.org/10.5194/gmd-17-4355-2024, 2024
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Ship weather routing has the potential to reduce CO2 emissions, but it currently lacks open and verifiable research. The Python-refactored VISIR-2 model considers currents, waves, and wind to optimise routes. The model was validated, and its computational performance is quasi-linear. For a ferry sailing in the Mediterranean Sea, VISIR-2 yields the largest percentage emission savings for upwind navigation. Given the vessel performance curve, the model is generalisable across various vessel types.
Soyoung Ha, Jonathan J. Guerrette, Ivette Hernández Baños, William C. Skamarock, and Michael G. Duda
Geosci. Model Dev., 17, 4199–4211, https://doi.org/10.5194/gmd-17-4199-2024, https://doi.org/10.5194/gmd-17-4199-2024, 2024
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To mitigate the imbalances in the initial conditions, this study introduces our recent implementation of the incremental analysis update (IAU) in the Model for Prediction Across Scales – Atmospheric (MPAS-A) component coupled with the Joint Effort for Data assimilation Integration (JEDI) through the cycling system. A month-long cycling run demonstrates the successful implementation of the IAU capability in the MPAS–JEDI cycling system.
Federica Castino, Feijia Yin, Volker Grewe, Hiroshi Yamashita, Sigrun Matthes, Simone Dietmüller, Sabine Baumann, Manuel Soler, Abolfazl Simorgh, Maximilian Mendiguchia Meuser, Florian Linke, and Benjamin Lührs
Geosci. Model Dev., 17, 4031–4052, https://doi.org/10.5194/gmd-17-4031-2024, https://doi.org/10.5194/gmd-17-4031-2024, 2024
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We introduce SolFinder 1.0, a decision-making tool to select trade-offs between different objective functions for optimal aircraft trajectories, including fuel use, flight time, NOx emissions, contrail distance, and climate impact. The module is included in the AirTraf 3.0 submodel and uses weather conditions simulated by the EMAC atmospheric model. This paper focuses on the ability of SolFinder to identify eco-efficient trajectories, reducing a flight's climate impact at limited cost penalties.
Ali Dashti, Jens C. Grimmer, Christophe Geuzaine, Florian Bauer, and Thomas Kohl
Geosci. Model Dev., 17, 3467–3485, https://doi.org/10.5194/gmd-17-3467-2024, https://doi.org/10.5194/gmd-17-3467-2024, 2024
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This study developed new meshing workflows to enable the automatic generation of meshes that follow geological models. The workflow allows for importing several geological models as input for Gmsh and later exporting the same number of high-quality meshes. This way, geological uncertainty is directly included in the numerical simulations. This study evaluates the impact of the geological uncertainty on thermohydraulic performance of two reservoirs for high-temperature heat storage applications.
Wangbin Shen, Zhaohui Lin, Zhengkun Qin, and Juan Li
Geosci. Model Dev., 17, 3447–3465, https://doi.org/10.5194/gmd-17-3447-2024, https://doi.org/10.5194/gmd-17-3447-2024, 2024
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In this study, a land surface image assimilation system capable of optimizing the spatial structure of the background field is constructed by introducing the curvelet analysis method and taking the similarity of image structure as a weak constraint. The findings demonstrate that the assimilation of surface soil moisture observation images effectively and reasonably enhances the spatial structure of soil moisture analysis field.
Luan Carlos de Sena Monteiro Ozelim, Michéle Dal Toé Casagrande, and André Luís Brasil Cavalcante
Geosci. Model Dev., 17, 3175–3197, https://doi.org/10.5194/gmd-17-3175-2024, https://doi.org/10.5194/gmd-17-3175-2024, 2024
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The paper addresses synthetic dataset challenges in nonlinear constitutive modeling of soils, providing two datasets: one with 2000 soil types, 40 test conditions each (160 000 triaxial tests), and a second with 2048 soil types, 42 test conditions each (172 032 triaxial tests). Each dataset is a 4000×10 matrix applicable for multivariate forecasting and geotechnical simulations. In addition, a new Python code is introduced, empowering researchers to leverage Python packages for NorSand analyses.
Daniel Giles, Matthew M. Graham, Mosè Giordano, Tuomas Koskela, Alexandros Beskos, and Serge Guillas
Geosci. Model Dev., 17, 2427–2445, https://doi.org/10.5194/gmd-17-2427-2024, https://doi.org/10.5194/gmd-17-2427-2024, 2024
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Digital twins of physical and human systems informed by real-time data are becoming ubiquitous across a wide range of settings. Progress for researchers is currently limited by a lack of tools to run these models effectively and efficiently. A key challenge is the optimal use of high-performance computing environments. The work presented here focuses on a developed open-source software platform which aims to improve this usage, with an emphasis placed on flexibility, efficiency, and scalability.
Stefan J. Miller, Paul A. Makar, and Colin J. Lee
Geosci. Model Dev., 17, 2197–2219, https://doi.org/10.5194/gmd-17-2197-2024, https://doi.org/10.5194/gmd-17-2197-2024, 2024
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This work outlines a new solver written in Fortran to calculate the partitioning of metastable aerosols at thermodynamic equilibrium based on the forward algorithms of ISORROPIA II. The new code includes numerical improvements that decrease the computational speed (compared to ISORROPIA II) while improving the accuracy of the partitioning solution.
Fernanda Alvarado-Neves, Laurent Ailleres, Lachlan Grose, Alexander R. Cruden, and Robin Armit
Geosci. Model Dev., 17, 1975–1993, https://doi.org/10.5194/gmd-17-1975-2024, https://doi.org/10.5194/gmd-17-1975-2024, 2024
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Previous work has demonstrated that adding geological knowledge to modelling methods creates more accurate and reliable models. Following this reasoning, we added constraints from magma emplacement mechanisms into existing modelling frameworks to improve the 3D characterisation of igneous intrusions. We tested the method on synthetic and real-world case studies, and the results show that our method can reproduce intrusion morphologies with no manual processing and using realistic datasets.
André R. Brodtkorb, Anna Benedictow, Heiko Klein, Arve Kylling, Agnes Nyiri, Alvaro Valdebenito, Espen Sollum, and Nina Kristiansen
Geosci. Model Dev., 17, 1957–1974, https://doi.org/10.5194/gmd-17-1957-2024, https://doi.org/10.5194/gmd-17-1957-2024, 2024
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It is vital to know the extent and concentration of volcanic ash in the atmosphere during a volcanic eruption. Whilst satellite imagery may give an estimate of the ash right now (assuming no cloud coverage), we also need to know where it will be in the coming hours. This paper presents a method for estimating parameters for a volcanic eruption based on satellite observations of ash in the atmosphere. The software package is open source and applicable to similar inversion scenarios.
Kees Nederhoff, Maarten van Ormondt, Jay Veeramony, Ap van Dongeren, José Antonio Álvarez Antolínez, Tim Leijnse, and Dano Roelvink
Geosci. Model Dev., 17, 1789–1811, https://doi.org/10.5194/gmd-17-1789-2024, https://doi.org/10.5194/gmd-17-1789-2024, 2024
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Forecasting tropical cyclones and their flooding impact is challenging. Our research introduces the Tropical Cyclone Forecasting Framework (TC-FF), enhancing cyclone predictions despite uncertainties. TC-FF generates global wind and flood scenarios, valuable even in data-limited regions. Applied to cases like Cyclone Idai, it showcases potential in bettering disaster preparation, marking progress in handling cyclone threats.
Younghun Kang and Ethan J. Kubatko
Geosci. Model Dev., 17, 1603–1625, https://doi.org/10.5194/gmd-17-1603-2024, https://doi.org/10.5194/gmd-17-1603-2024, 2024
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Models used to simulate the flow of coastal and riverine waters, including flooding, require a geometric representation (or mesh) of geographic features that exhibit a range of disparate spatial scales from large, open waters to small, narrow channels. Representing these features in an accurate way without excessive computational overhead presents a challenge. Here, we develop an automatic mesh generation tool to help address this challenge. Our results demonstrate the efficacy of our approach.
Hui Wan, Kai Zhang, Christopher J. Vogl, Carol S. Woodward, Richard C. Easter, Philip J. Rasch, Yan Feng, and Hailong Wang
Geosci. Model Dev., 17, 1387–1407, https://doi.org/10.5194/gmd-17-1387-2024, https://doi.org/10.5194/gmd-17-1387-2024, 2024
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Sophisticated numerical models of the Earth's atmosphere include representations of many physical and chemical processes. In numerical simulations, these processes need to be calculated in a certain sequence. This study reveals the weaknesses of the sequence of calculations used for aerosol processes in a global atmosphere model. A revision of the sequence is proposed and its impacts on the simulated global aerosol climatology are evaluated.
Christopher J. Vogl, Hui Wan, Carol S. Woodward, and Quan M. Bui
Geosci. Model Dev., 17, 1409–1428, https://doi.org/10.5194/gmd-17-1409-2024, https://doi.org/10.5194/gmd-17-1409-2024, 2024
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Generally speaking, accurate climate simulation requires an accurate evolution of the underlying mathematical equations on large computers. The equations are typically formulated and evolved in process groups. Process coupling refers to how the evolution of each group is combined with that of other groups to evolve the full set of equations for the whole atmosphere. This work presents a mathematical framework to evaluate methods without the need to first implement the methods.
Tom Keel, Chris Brierley, and Tamsin Edwards
Geosci. Model Dev., 17, 1229–1247, https://doi.org/10.5194/gmd-17-1229-2024, https://doi.org/10.5194/gmd-17-1229-2024, 2024
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Jet streams are an important control on surface weather as their speed and shape can modify the properties of weather systems. Establishing trends in the operation of jet streams may provide some indication of the future of weather in a warming world. Despite this, it has not been easy to establish trends, as many methods have been used to characterise them in data. We introduce a tool containing various implementations of jet stream statistics and algorithms that works in a standardised manner.
Amir Golparvar, Matthias Kästner, and Martin Thullner
Geosci. Model Dev., 17, 881–898, https://doi.org/10.5194/gmd-17-881-2024, https://doi.org/10.5194/gmd-17-881-2024, 2024
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Coupled reaction transport modelling is an established and beneficial method for studying natural and synthetic porous material, with applications ranging from industrial processes to natural decompositions in terrestrial environments. Up to now, a framework that explicitly considers the porous structure (e.g. from µ-CT images) for modelling the transport of reactive species is missing. We presented a model that overcomes this limitation and represents a novel numerical simulation toolbox.
Stefan Hergarten
Geosci. Model Dev., 17, 781–794, https://doi.org/10.5194/gmd-17-781-2024, https://doi.org/10.5194/gmd-17-781-2024, 2024
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The Voellmy rheology has been widely used for simulating snow and rock avalanches. Recently, a modified version of this rheology was proposed, which turned out to be able to predict the observed long runout of large rock avalanches theoretically. The software MinVoellmy presented here is the first numerical implementation of the modified rheology. It consists of MATLAB and Python classes, where simplicity and parsimony were the design goals.
Arjun Babu Nellikkattil, Danielle Lemmon, Travis Allen O'Brien, June-Yi Lee, and Jung-Eun Chu
Geosci. Model Dev., 17, 301–320, https://doi.org/10.5194/gmd-17-301-2024, https://doi.org/10.5194/gmd-17-301-2024, 2024
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This study introduces a new computational framework called Scalable Feature Extraction and Tracking (SCAFET), designed to extract and track features in climate data. SCAFET stands out by using innovative shape-based metrics to identify features without relying on preconceived assumptions about the climate model or mean state. This approach allows more accurate comparisons between different models and scenarios.
Mohammad Mortezazadeh, Jean-François Cossette, Ashu Dastoor, Jean de Grandpré, Irena Ivanova, and Abdessamad Qaddouri
Geosci. Model Dev., 17, 335–346, https://doi.org/10.5194/gmd-17-335-2024, https://doi.org/10.5194/gmd-17-335-2024, 2024
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The interpolation process is the most computationally expensive step of the semi-Lagrangian (SL) approach. In this paper we implement a new interpolation scheme into the semi-Lagrangian approach which has the same computational cost as a third-order polynomial scheme but with the accuracy of a fourth-order interpolation scheme. This improvement is achieved by using two third-order backward and forward polynomial interpolation schemes in two consecutive time steps.
Boris Gailleton, Luca C. Malatesta, Guillaume Cordonnier, and Jean Braun
Geosci. Model Dev., 17, 71–90, https://doi.org/10.5194/gmd-17-71-2024, https://doi.org/10.5194/gmd-17-71-2024, 2024
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This contribution presents a new method to numerically explore the evolution of mountain ranges and surrounding areas. The method helps in monitoring with details on the timing and travel path of material eroded from the mountain ranges. It is particularly well suited to studies juxtaposing different domains – lakes or multiple rock types, for example – and enables the combination of different processes.
Denise Degen, Daniel Caviedes Voullième, Susanne Buiter, Harrie-Jan Hendricks Franssen, Harry Vereecken, Ana González-Nicolás, and Florian Wellmann
Geosci. Model Dev., 16, 7375–7409, https://doi.org/10.5194/gmd-16-7375-2023, https://doi.org/10.5194/gmd-16-7375-2023, 2023
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In geosciences, we often use simulations based on physical laws. These simulations can be computationally expensive, which is a problem if simulations must be performed many times (e.g., to add error bounds). We show how a novel machine learning method helps to reduce simulation time. In comparison to other approaches, which typically only look at the output of a simulation, the method considers physical laws in the simulation itself. The method provides reliable results faster than standard.
Cited articles
Abuhegazy, M., Talaat, K., Anderoglu, O., and Poroseva, S. V.: Numerical
investigation of aerosol transport in a classroom with relevance to COVID-19,
Phys. Fluids, 32, 103311, https://doi.org/10.1063/5.0029118, 2020. a
Benson, D. A., Aquino, T., Bolster, D., Engdahl, N., Henri, C. V., and
Fernandez-Garcia, D.: A comparison of Eulerian and Lagrangian transport and
non-linear reaction algorithms, Adv. Water Resour., 99, 15–37,
https://doi.org/10.1016/j.advwatres.2016.11.003, 2017. a
Craig, P. D. and Banner, M. L.: Modeling wave-enhanced turbulence in the ocean
surface layer, J. Phys. Oceanogr., 24, 2546–2559,
https://doi.org/10.1175/1520-0485(1994)024<2546:MWETIT>2.0.CO;2, 1994. a
Cui, F., Boufadel, M. C., Geng, X., Gao, F., Zhao, L., King, T., and Lee, K.:
Oil Droplets Transport Under a Deep-Water Plunging Breaker: Impact of Droplet
Inertia, J. Geophys. Res.-Oceans, 123, 9082–9100,
https://doi.org/10.1029/2018JC014495, 2018. a
Cui, F., Zhao, L., Daskiran, C., King, T., Lee, K., Katz, J., and Boufadel,
M. C.: Modeling oil dispersion under breaking waves. Part II: Coupling
Lagrangian particle tracking with population balance model, Environ. Fluid
Mech., 20, 1553–1578, https://doi.org/10.1007/s10652-020-09759-1, 2020. a, b
de la Fuente, R., Drótos, G., Hernández-García, E., López, C., and van Sebille, E.: Sinking microplastics in the water column: simulations in the Mediterranean Sea, Ocean Sci., 17, 431–453, https://doi.org/10.5194/os-17-431-2021, 2021. a
Delandmeter, P. and van Sebille, E.: The Parcels v2.0 Lagrangian framework: new field interpolation schemes, Geosci. Model Dev., 12, 3571–3584, https://doi.org/10.5194/gmd-12-3571-2019, 2019. a
Devroye, L.: Non-uniform random variate generation, Springer-Verlag, New York, https://doi.org/10.1007/978-1-4613-8643-8,
1986. a
Dissanayake, A. L., DeGraff, J. A., Yapa, P. D., Nakata, K., Ishihara, Y., and
Yabe, I.: Modeling the impact of CO2 releases in Kagoshima Bay, Japan, J.
Hydro-Environ. Res., 6, 195–208, https://doi.org/10.1016/j.jher.2012.02.001, 2012. a
Dissanayake, A. L., Yapa, P. D., and Nakata, K.: Simulation of hydrothermal
vents in the Izena Cauldron, Mid Okinawa trough, Japan and other Pacific
locations, J. Hydro-Environ. Res., 8, 343–357,
https://doi.org/10.1016/j.jher.2014.05.003, 2014. a
Dugstad, J. S., Koszalka, I. M., Isachsen, P. E., Dagestad, K.-F., and Fer, I.:
Vertical Structure and Seasonal Variability of the Inflow to the Lofoten
Basin Inferred From High-Resolution Lagrangian Simulations, J. Geophys.
Res.-Oceans, 124, 9384–9403, https://doi.org/10.1029/2019JC015474, 2019. a
Elliott, A., Hurford, N., and Penn, C.: Shear diffusion and the spreading of
oil slicks, Mar. Pollut. Bull., 17, 308–313, 1986. a
Fay, B., Glaab, H., Jacobsen, I., and Schrodin, R.: Evaluation of Eulerian and
Lagrangian atmospheric transport models at the Deutscher Wetterdienst using
ANATEX surface tracer data, Atmos. Environ., 29, 2485–2497,
https://doi.org/10.1016/1352-2310(95)00144-N, 1995. a
Fischer, R., Lobelle, D., Kooi, M., Koelmans, A., Onink, V., Laufkötter, C., Amaral-Zettler, L., Yool, A., and van Sebille, E.: Modelling submerged biofouled microplastics and their vertical trajectories, Biogeosciences, 19, 2211–2234, https://doi.org/10.5194/bg-19-2211-2022, 2022. a
Gill, A. E.: Atmosphere-Ocean Dynamics, vol. 30 of International
Geophysics Series, Academic Press, New York, ISBN 9780122835223, 1982. a
Gräwe, U.: Implementation of high-order particle-tracking schemes in a
water column model, Ocean Model., 36, 80–89,
https://doi.org/10.1016/j.ocemod.2010.10.002, 2011. a
Gräwe, U., Deleersnijder, E., Shah, S. H. A. M., and Heemink, A. W.: Why
the Euler scheme in particle tracking is not enough: the shallow-sea
pycnocline test case, Ocean Dynam., 62, 501–514,
https://doi.org/10.1007/s10236-012-0523-y, 2012. a
Gustafsson, B.: High order difference methods for time dependent PDE,
Springer-Verlag, Berlin Heidelberg, https://doi.org/10.1007/978-3-540-74993-6, 2008. a, b
Isachenko, I.: Catching the variety: Obtaining the distribution of terminal
velocities of microplastics particles in a stagnant fluid by a stochastic
simulation, Mar. Pollut. Bull., 159, 111464,
https://doi.org/10.1016/j.marpolbul.2020.111464, 2020. a
Israelsson, P. H., Do Kim, Y., and Adams, E. E.: A comparison of three
Lagrangian approaches for extending near field mixing calculations, Environ.
Modell. Softw., 21, 1631–1649, https://doi.org/10.1016/j.envsoft.2005.07.008, 2006. a
Johansen, Ø., Reed, M., and Bodsberg, N. R.: Natural dispersion revisited,
Mar. Pollut. Bull., 93, 20–26, https://doi.org/10.1016/j.marpolbul.2015.02.026, 2015. a, b
Li, Z., Spaulding, M. L., and French-McCay, D.: An algorithm for modeling
entrainment and naturally and chemically dispersed oil droplet size
distribution under surface breaking wave conditions, Mar. Pollut. Bull.,
119, 145–152, 2017. a
Lien, F.-S. and Leschziner, M.: Upstream monotonic interpolation for scalar
transport with application to complex turbulent flows, Int. J. Numer. Meth.
Fl., 19, 527–548, https://doi.org/10.1002/fld.1650190606, 1994. a
Longest, P. W. and Xi, J.: Effectiveness of direct Lagrangian tracking models
for simulating nanoparticle deposition in the upper airways, Aerosol Sci.
Tech., 41, 380–397, https://doi.org/10.1080/02786820701203223, 2007. a
Lynch, D. R., Greenberg, D. A., Bilgili, A., McGillicuddy Jr, D. J., Manning,
J. P., and Aretxabaleta, A. L.: Particles in the Coastal Ocean: Theory and
Applications, Cambridge University Press, ISBN 9781107061750, 2014. a
Madec, G., Bourdallé-Badie, R., Chanut, J., Clementi, E., Coward, A., Ethé,
C., Iovino, D., Lea, D., Lévy, C., Lovato, T., Martin, N., Masson, S.,
Mocavero, S., Rousset, C., Storkey, D., Müeller, S., Nurser, G., Bell, M.,
Samson, G., Mathiot, P., Mele, F., and Moulin, A.: NEMO ocean engine, vol. 27
of Scientific Notes of IPSL Climate Modelling Center, Zenodo,
https://doi.org/10.5281/zenodo.6334656, 2022. a
Marsh, R., Ivchenko, V. O., Skliris, N., Alderson, S., Bigg, G. R., Madec, G., Blaker, A. T., Aksenov, Y., Sinha, B., Coward, A. C., Le Sommer, J., Merino, N., and Zalesny, V. B.: NEMO–ICB (v1.0): interactive icebergs in the NEMO ocean model globally configured at eddy-permitting resolution, Geosci. Model Dev., 8, 1547–1562, https://doi.org/10.5194/gmd-8-1547-2015, 2015. a
Matsumura, Y. and Ohshima, K. I.: Lagrangian modelling of frazil ice in the
ocean, Ann. Glaciol., 56, 373–382, https://doi.org/10.3189/2015AoG69A657, 2015. a
Mountford, A. and Morales Maqueda, M.: Eulerian Modeling of the
Three-Dimensional Distribution of Seven Popular Microplastic Types in the
Global Ocean, J. Geophys. Res.-Oceans, 124, 8558–8573,
https://doi.org/10.1029/2019JC015050, 2019. a
Nepstad, R., Liste, M., Alver, M. O., Nordam, T., Davies, E., and Glette, T.:
High-resolution numerical modelling of a marine mine tailings discharge in
Western Norway, Regional Studies in Marine Science, 39, 101404,
https://doi.org/10.1016/j.rsma.2020.101404, 2020. a
Nepstad, R., Nordam, T., Ellingsen, I. H., Eisenhauer, L., Litzler, E., and
Kotzakoulakis, K.: Impact of flow field resolution on produced water
transport in Lagrangian and Eulerian models, Mar. Pollut. Bull., 182,
113928, https://doi.org/10.1016/j.marpolbul.2022.113928, 2022. a, b
Nooteboom, P. D., Bijl, P. K., van Sebille, E., von der Heydt, A. S., and
Dijkstra, H. A.: Transport Bias by Ocean Currents in Sedimentary
Microplankton Assemblages: Implications for Paleoceanographic
Reconstructions, Paleoceanogr. Paleoclim., 34, 1178–1194,
https://doi.org/10.1029/2019PA003606, 2019. a
Nordam, T.: nordam/Eulerian-and-Lagrangian-methods: 1.2, Zenodo [code],
https://doi.org/10.5281/zenodo.8164812, 2023. a
Nordam, T., Kristiansen, R., Nepstad, R., and Röhrs, J.: Numerical analysis
of boundary conditions in a Lagrangian particle model for vertical mixing,
transport and surfacing of buoyant particles in the water column, Ocean
Model., 136, 107–119, https://doi.org/10.1016/j.ocemod.2019.03.003,
2019a. a, b, c, d, e, f, g
Nordam, T., Nepstad, R., Litzler, E., and Röhrs, J.: On the use of random
walk schemes in oil spill modelling, Mar. Pollut. Bull., 146, 631–638,
https://doi.org/10.1016/j.marpolbul.2019.07.002, 2019b. a, b, c, d
Pavliotis, G. A.: Stochastic Processes and Applications, Springer
Science+Business Media, New York, ISBN 9781493913220, 2014. a
Powers, M. C.: A new roundness scale for sedimentary particles, J. Sediment.
Res., 23, 117–119, https://doi.org/10.1306/D4269567-2B26-11D7-8648000102C1865D, 1953. a
Rodean, H. C.: Stochastic Lagrangian Models of Turbulent Diffusion, vol. 26 of
Meteorological Monographs, American Meteorological Society, Boston,
MA, ISBN 1878220233, 1996. a
Röhrs, J., Christensen, K. H., Vikebø, F., Sundby, S., Saetra, Ø.,
and Broström, G.: Wave-induced transport and vertical mixing of pelagic
eggs and larvae, Limnol. Oceanogr., 59, 1213–1227,
https://doi.org/10.4319/lo.2014.59.4.1213, 2014. a, b
Röhrs, J., Dagestad, K.-F., Asbjørnsen, H., Nordam, T., Skancke, J., Jones, C. E., and Brekke, C.: The effect of vertical mixing on the horizontal drift of oil spills, Ocean Sci., 14, 1581–1601, https://doi.org/10.5194/os-14-1581-2018, 2018. a
Ross, O. N. and Sharples, J.: Recipe for 1-D Lagrangian particle tracking
models in space-varying diffusivity, Limnol. Oceanogr.-Meth., 2, 289–302,
https://doi.org/10.4319/lom.2004.2.289, 2004. a
Rowe, M., Anderson, E., Wynne, T., Stumpf, R., Fanslow, D., Kijanka, K.,
Vanderploeg, H., Strickler, J., and Davis, T.: Vertical distribution of
buoyant Microcystis blooms in a Lagrangian particle tracking model for
short-term forecasts in Lake Erie, J. Geophys. Res.-Oceans, 121, 5296–5314,
https://doi.org/10.1002/2016JC011720, 2016. a
Saharia, A. M., Zhu, Z., Aich, N., Baalousha, M., and Atkinson, J. F.: Modeling
the transport of titanium dioxide nanomaterials from combined sewer overflows
in an urban river, Sci. Total Environ., 696, 133904,
https://doi.org/10.1016/j.scitotenv.2019.133904, 2019. a
Scutt Phillips, J., Gupta, A. S., Senina, I., van Sebille, E., Lange, M.,
Lehodey, P., Hampton, J., and Nicol, S.: An individual-based model of
skipjack tuna (Katsuwonus pelamis) movement in the tropical Pacific ocean,
Prog. Oceanogr., 164, 63–74, https://doi.org/10.1016/j.pocean.2018.04.007, 2018. a
Shchepetkin, A. F. and McWilliams, J. C.: The regional oceanic modeling system
(ROMS): a split-explicit, free-surface, topography-following-coordinate
oceanic model, Ocean Model., 9, 347–404, https://doi.org/10.1016/j.ocemod.2004.08.002,
2005. a
Skorokhod, A. V.: Stochastic equations for diffusion processes in a bounded
region, Theor. Probab. Appl+., 6, 264–274, https://doi.org/10.1137/1106035, 1961. a, b
Skorokhod, A. V.: Stochastic equations for diffusion processes in a bounded
region II, Theor. Probab. Appl+., 7, 3–23, https://doi.org/10.1137/1107002, 1962. a
Strauss, R. D. T. and Effenberger, F.: A hitch-hiker’s guide to stochastic
differential equations, Space Sci. Rev., 212, 151–192,
https://doi.org/10.1007/s11214-017-0351-y, 2017. a
Sundby, S. and Kristiansen, T.: The principles of buoyancy in marine fish eggs
and their vertical distributions across the world oceans, PLoS One, 10,
e0138821, https://doi.org/10.1371/journal.pone.0138821, 2015. a
Tayfun, M. A. and Wang, H.: Monte Carlo simulation of oil slick movements, J.
Waterway Div.-ASCE, 99, 309–324, https://doi.org/10.1061/AWHCAR.0000197, 1973. a
Tegen, I. and Lacis, A. A.: Modeling of particle size distribution and its
influence on the radiative properties of mineral dust aerosol, J. Geophys.
Res.-Atmos., 101, 19237–19244, https://doi.org/10.1029/95JD03610, 1996. a
Thorpe, S. A.: The turbulent ocean, Cambridge University Press, Cambridge, UK, https://doi.org/10.1017/CBO9780511819933,
2005. a
Tkalich, P. and Chan, E. S.: Vertical mixing of oil droplets by breaking waves,
Mar. Pollut. Bull., 44, 1219–1229, https://doi.org/10.1016/S0025-326X(02)00178-9,
2002. a
Umlauf, L., Burchard, H., and Bolding, K.: GOTM – Scientific Documentation:
version 3.2, Marine Science Reports, Leibniz-Institute for Baltic Sea
Research, Warnemuende, Germany, https://www.io-warnemuende.de/files/forschung/meereswissenschaftliche-berichte/mebe63_2005-gotm.pdf (last access: 11 September 2023), 2005.
a
Van Sebille, E., Scussolini, P., Durgadoo, J. V., Peeters, F. J., Biastoch, A.,
Weijer, W., Turney, C., Paris, C. B., and Zahn, R.: Ocean currents generate
large footprints in marine palaeoclimate proxies, Nat. Commun., 6, 1–8,
https://doi.org/10.1038/ncomms7521, 2015. a
van Sebille, E., Griffies, S. M., Abernathey, R., Adams, T. P., Berloff, P.,
Biastoch, A., Blanke, B., Chassignet, E. P., Cheng, Y., Cotter, C. J.,
Deleersnijder, E., Döös, K., Drake, H. F., Drijfhout, S., Gary,
S. F., Heemink, A. W., Kjellsson, J., Koszalka, I. M., Lange, M., Lique, C.,
MacGilchrist, G. A., Marsh, R., Mayorga Adame, C. G., McAdam, R., Nencioli,
F., Paris, C. B., Piggott, M. D., Polton, J. A., Rühs, S., Shah, S. H.,
Thomas, M. D., Wang, J., Wolfram, P. J., Zanna, L., and Zika, J. D.:
Lagrangian ocean analysis: Fundamentals and practices, Ocean Model., 121,
49–75, https://doi.org/10.1016/j.ocemod.2017.11.008, 2018. a
Warner, J. C., Sherwood, C. R., Signell, R. P., Harris, C. K., and Arango,
H. G.: Development of a three-dimensional, regional, coupled wave, current,
and sediment-transport model, Comput. Geosci., 34, 1284–1306,
https://doi.org/10.1016/j.cageo.2008.02.012, 2008. a
Wichmann, D., Delandmeter, P., and van Sebille, E.: Influence of near-surface
currents on the global dispersal of marine microplastic, J. Geophys.
Res.-Oceans, 124, 6086–6096, https://doi.org/10.1029/2019JC015328, 2019. a, b
Wilson, J. D. and Flesch, T. K.: Flow boundaries in random-flight dispersion
models: enforcing the well-mixed condition, J. Appl. Meteorol. Clim., 32,
1695–1707, https://doi.org/10.1175/1520-0450(1993)032<1695:FBIRFD>2.0.CO;2, 1993. a
Wimalaratne, M. R., Yapa, P. D., Nakata, K., and Premathilake, L. T.: Transport
of dissolved gas and its ecological impact after a gas release from
deepwater, Mar. Pollut. Bull., 100, 279–288,
https://doi.org/10.1016/j.marpolbul.2015.08.039, 2015. a
Young, E. F., Belchier, M., Hauser, L., Horsburgh, G. J., Meredith, M. P.,
Murphy, E. J., Pascoal, S., Rock, J., Tysklind, N., and Carvalho, G. R.:
Oceanography and life history predict contrasting genetic population
structure in two Antarctic fish species, Evol. Appl., 8, 486–509,
https://doi.org/10.1111/eva.12259, 2015. a
Zender, C. S., Bian, H., and Newman, D.: Mineral Dust Entrainment and
Deposition (DEAD) model: Description and 1990s dust climatology, J. Geophys.
Res.-Atmos., 108, 4416, https://doi.org/10.1029/2002JD002775, 2003. a
Short summary
We describe and compare two common methods, Eulerian and Lagrangian models, used to simulate the vertical transport of material in the ocean. They both solve the same transport problems but use different approaches for representing the underlying equations on the computer. The main focus of our study is on the numerical accuracy of the two approaches. Our results should be useful for other researchers creating or using these types of transport models.
We describe and compare two common methods, Eulerian and Lagrangian models, used to simulate the...
