Articles | Volume 15, issue 18
https://doi.org/10.5194/gmd-15-7139-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-15-7139-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Model description paper
| 
22 Sep 2022
Model description paper |
| 22 Sep 2022
| 22 Sep 2022
MultilayerPy (v1.0): a Python-based framework for building, running and optimising kinetic multi-layer models of aerosols and films
Adam Milsom
School of Geography, Earth and Environmental Sciences, University of Birmingham, Edgbaston, Birmingham, UK
Amy Lees
School of Geography, Earth and Environmental Sciences, University of Birmingham, Edgbaston, Birmingham, UK
Adam M. Squires
Department of Chemistry, University of Bath, South Building, Soldier Down Ln, Claverton Down, Bath, UK
School of Geography, Earth and Environmental Sciences, University of Birmingham, Edgbaston, Birmingham, UK
Department of Meteorology, University of Reading, Whiteknights, Earley Gate, Reading, UK
Related authors
Sophie A. Mills, Adam Milsom, Christian Pfrang, A. Rob MacKenzie, and Francis D. Pope
Atmos. Meas. Tech., 16, 4885–4898, https://doi.org/10.5194/amt-16-4885-2023, https://doi.org/10.5194/amt-16-4885-2023, 2023
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Pollen grains are important components of the atmosphere and have the potential to impact upon cloud processes via their ability to help in the formation of rain droplets. This study investigates the hygroscopicity of two different pollen species using an acoustic levitator. Pollen grains are levitated, and their response to changes in relative humidity is investigated. A key advantage of this method is that it is possible study pollen shape under varying environmental conditions.
Adam Milsom, Shaojun Qi, Ashmi Mishra, Thomas Berkemeier, Zhenyu Zhang, and Christian Pfrang
Atmos. Chem. Phys., 23, 10835–10843, https://doi.org/10.5194/acp-23-10835-2023, https://doi.org/10.5194/acp-23-10835-2023, 2023
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Aerosols and films are found indoors and outdoors. Our study measures and models reactions of a cooking aerosol proxy with the atmospheric oxidant ozone relying on a low-cost but sensitive technique based on mass changes and film rigidity. We found that film morphology changed and film rigidity increased with evidence of surface crust formation during ozone exposure. Our modelling results demonstrate clear potential to take this robust method to the field for reaction monitoring.
Adam Milsom, Adam M. Squires, Andrew D. Ward, and Christian Pfrang
Atmos. Chem. Phys., 22, 4895–4907, https://doi.org/10.5194/acp-22-4895-2022, https://doi.org/10.5194/acp-22-4895-2022, 2022
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Cooking emissions can self-organise into nanostructured lamellar bilayers, and this can influence reaction kinetics. We developed a kinetic multi-layer model-based description of decay data we obtained from laboratory experiments of the ozonolysis of coated films of such a self-organised system, demonstrating a decreased diffusivity for both oleic acid and ozone. Nanostructure formation can thus increase the reactive half-life of oleic acid by days under typical indoor and outdoor conditions.
Adam Milsom, Adam M. Squires, Jacob A. Boswell, Nicholas J. Terrill, Andrew D. Ward, and Christian Pfrang
Atmos. Chem. Phys., 21, 15003–15021, https://doi.org/10.5194/acp-21-15003-2021, https://doi.org/10.5194/acp-21-15003-2021, 2021
Short summary
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Atmospheric aerosols can be solid, semi-solid or liquid. This phase state may impact key aerosol processes such as oxidation and water uptake, affecting cloud droplet formation and urban air pollution. We have observed a solid crystalline organic phase in a levitated proxy for cooking emissions, oleic acid. Spatially resolved structural changes were followed during ageing by X-ray scattering, revealing phase gradients, aggregate products and a markedly reduced ozonolysis reaction rate.
Benjamin Woden, Maximilian W. A. Skoda, Adam Milsom, Curtis Gubb, Armando Maestro, James Tellam, and Christian Pfrang
Atmos. Chem. Phys., 21, 1325–1340, https://doi.org/10.5194/acp-21-1325-2021, https://doi.org/10.5194/acp-21-1325-2021, 2021
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Atmospheric aerosols contain a large amount of organic compounds, whose oxidation affects their physical properties through a process known as ageing. We have simulated atmospheric ageing experimentally to elucidate the nature and behaviour of residual surface films. Our results show an increasing amount of residue at near-zero temperatures, demonstrating that an inert product film may build up during droplet ageing, even if only ordinarily short-lived reactive species are initially emitted.
Adam Milsom, Adam M. Squires, Ben Laurence, Ben Wōden, Andrew J. Smith, Andrew D. Ward, and Christian Pfrang
EGUsphere, https://doi.org/10.5194/egusphere-2024-905, https://doi.org/10.5194/egusphere-2024-905, 2024
This preprint is open for discussion and under review for Atmospheric Chemistry and Physics (ACP).
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We followed nano-structural changes in mixtures found in urban organic aerosol emissions (oleic acid, sodium oleate & fructose) during humidity change & ozone exposure. We demonstrate that self-assembly of fatty acid nanostructures can impact on water uptake & chemical reactivity affecting atmospheric lifetimes, urban air quality (protecting harmful emissions from degradation and enabling their long-range transport) & climate (affecting cloud formation) with implications for human health.
Sophie A. Mills, Adam Milsom, Christian Pfrang, A. Rob MacKenzie, and Francis D. Pope
Atmos. Meas. Tech., 16, 4885–4898, https://doi.org/10.5194/amt-16-4885-2023, https://doi.org/10.5194/amt-16-4885-2023, 2023
Short summary
Short summary
Pollen grains are important components of the atmosphere and have the potential to impact upon cloud processes via their ability to help in the formation of rain droplets. This study investigates the hygroscopicity of two different pollen species using an acoustic levitator. Pollen grains are levitated, and their response to changes in relative humidity is investigated. A key advantage of this method is that it is possible study pollen shape under varying environmental conditions.
Adam Milsom, Shaojun Qi, Ashmi Mishra, Thomas Berkemeier, Zhenyu Zhang, and Christian Pfrang
Atmos. Chem. Phys., 23, 10835–10843, https://doi.org/10.5194/acp-23-10835-2023, https://doi.org/10.5194/acp-23-10835-2023, 2023
Short summary
Short summary
Aerosols and films are found indoors and outdoors. Our study measures and models reactions of a cooking aerosol proxy with the atmospheric oxidant ozone relying on a low-cost but sensitive technique based on mass changes and film rigidity. We found that film morphology changed and film rigidity increased with evidence of surface crust formation during ozone exposure. Our modelling results demonstrate clear potential to take this robust method to the field for reaction monitoring.
Adam Milsom, Adam M. Squires, Andrew D. Ward, and Christian Pfrang
Atmos. Chem. Phys., 22, 4895–4907, https://doi.org/10.5194/acp-22-4895-2022, https://doi.org/10.5194/acp-22-4895-2022, 2022
Short summary
Short summary
Cooking emissions can self-organise into nanostructured lamellar bilayers, and this can influence reaction kinetics. We developed a kinetic multi-layer model-based description of decay data we obtained from laboratory experiments of the ozonolysis of coated films of such a self-organised system, demonstrating a decreased diffusivity for both oleic acid and ozone. Nanostructure formation can thus increase the reactive half-life of oleic acid by days under typical indoor and outdoor conditions.
Adam Milsom, Adam M. Squires, Jacob A. Boswell, Nicholas J. Terrill, Andrew D. Ward, and Christian Pfrang
Atmos. Chem. Phys., 21, 15003–15021, https://doi.org/10.5194/acp-21-15003-2021, https://doi.org/10.5194/acp-21-15003-2021, 2021
Short summary
Short summary
Atmospheric aerosols can be solid, semi-solid or liquid. This phase state may impact key aerosol processes such as oxidation and water uptake, affecting cloud droplet formation and urban air pollution. We have observed a solid crystalline organic phase in a levitated proxy for cooking emissions, oleic acid. Spatially resolved structural changes were followed during ageing by X-ray scattering, revealing phase gradients, aggregate products and a markedly reduced ozonolysis reaction rate.
Benjamin Woden, Maximilian W. A. Skoda, Adam Milsom, Curtis Gubb, Armando Maestro, James Tellam, and Christian Pfrang
Atmos. Chem. Phys., 21, 1325–1340, https://doi.org/10.5194/acp-21-1325-2021, https://doi.org/10.5194/acp-21-1325-2021, 2021
Short summary
Short summary
Atmospheric aerosols contain a large amount of organic compounds, whose oxidation affects their physical properties through a process known as ageing. We have simulated atmospheric ageing experimentally to elucidate the nature and behaviour of residual surface films. Our results show an increasing amount of residue at near-zero temperatures, demonstrating that an inert product film may build up during droplet ageing, even if only ordinarily short-lived reactive species are initially emitted.
Mohammed S. Alam, Leigh R. Crilley, James D. Lee, Louisa J. Kramer, Christian Pfrang, Mónica Vázquez-Moreno, Milagros Ródenas, Amalia Muñoz, and William J. Bloss
Atmos. Meas. Tech., 13, 5977–5991, https://doi.org/10.5194/amt-13-5977-2020, https://doi.org/10.5194/amt-13-5977-2020, 2020
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We report on the interference arising in measurements of nitrogen oxides (NOx) from the presence of a range of alkenes in sampled air when using the most widespread air quality monitoring technique for chemiluminescence detection. Interferences of up to 11 % are reported, depending upon the alkene present and conditions used. Such interferences may be of substantial importance for the interpretation of ambient NOx data, particularly for high volatile organic compound and low NOx environments.
Federica Sebastiani, Richard A. Campbell, Kunal Rastogi, and Christian Pfrang
Atmos. Chem. Phys., 18, 3249–3268, https://doi.org/10.5194/acp-18-3249-2018, https://doi.org/10.5194/acp-18-3249-2018, 2018
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We report the first kinetic study of a key atmospheric nighttime oxidant (NO3) with one-molecule thin organic layers at the air–water interface. Organic molecules were chosen to establish the impact of head group, aliphatic chain length and saturation. We show that NO3 may dominate degradation at night, retention of the organic character varies strongly and atmospheric lifetimes are longer than those determined at the interface – a key motivation for further experimental and modelling studies.
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cloudbandPy 1.0: an automated algorithm for the detection of tropical–extratropical cloud bands
PyRTlib: an educational Python-based library for non-scattering atmospheric microwave radiative transfer computations
Deep learning applied to CO2 power plant emissions quantification using simulated satellite images
Sensitivity of the WRF-Chem v4.4 simulations of ozone and formaldehyde and their precursors to multiple bottom-up emission inventories over East Asia during the KORUS-AQ 2016 field campaign
Optimising urban measurement networks for CO2 flux estimation: a high-resolution observing system simulation experiment using GRAMM/GRAL
Assessment of climate biases in OpenIFS version 43r3 across model horizontal resolutions and time steps
High-resolution multi-scaling of outdoor human thermal comfort and its intra-urban variability based on machine learning
Effects of vertical grid spacing on the climate simulated in the ICON-Sapphire global storm-resolving model
Development of the tangent linear and adjoint models of the global online chemical transport model MPAS-CO2 v7.3
Impacts of updated reaction kinetics on the global GEOS-Chem simulation of atmospheric chemistry
Spatial spin-up of precipitation in limited-area convection-permitting simulations over North America using the CRCM6/GEM5.0 model
Sensitivity of atmospheric rivers to aerosol treatment in regional climate simulations: insights from the AIRA identification algorithm
The implementation of dust mineralogy in COSMO5.05-MUSCAT
Implementation of the ISORROPIA-lite aerosol thermodynamics model into the EMAC chemistry climate model (based on MESSy v2.55): implications for aerosol composition and acidity
Evaluation of surface shortwave downward radiation forecasts by the numerical weather prediction model AROME
GEO4PALM v1.1: an open-source geospatial data processing toolkit for the PALM model system
Modeling collision–coalescence in particle microphysics: numerical convergence of mean and variance of precipitation in cloud simulations using the University of Warsaw Lagrangian Cloud Model (UWLCM) 2.1
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Rolf Sander
Geosci. Model Dev., 17, 2419–2425, https://doi.org/10.5194/gmd-17-2419-2024, https://doi.org/10.5194/gmd-17-2419-2024, 2024
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The open-source software MEXPLORER 1.0.0 is presented here. The program can be used to analyze, reduce, and visualize complex chemical reaction mechanisms. The mathematics behind the tool is based on graph theory: chemical species are represented as vertices, and reactions as edges. MEXPLORER is a community model published under the GNU General Public License.
Leonardo Olivetti and Gabriele Messori
Geosci. Model Dev., 17, 2347–2358, https://doi.org/10.5194/gmd-17-2347-2024, https://doi.org/10.5194/gmd-17-2347-2024, 2024
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In the last decades, weather forecasting up to 15 d into the future has been dominated by physics-based numerical models. Recently, deep learning models have challenged this paradigm. However, the latter models may struggle when forecasting weather extremes. In this article, we argue for deep learning models specifically designed to handle extreme events, and we propose a foundational framework to develop such models.
Stefan Rahimi, Lei Huang, Jesse Norris, Alex Hall, Naomi Goldenson, Will Krantz, Benjamin Bass, Chad Thackeray, Henry Lin, Di Chen, Eli Dennis, Ethan Collins, Zachary J. Lebo, Emily Slinskey, Sara Graves, Surabhi Biyani, Bowen Wang, Stephen Cropper, and the UCLA Center for Climate Science Team
Geosci. Model Dev., 17, 2265–2286, https://doi.org/10.5194/gmd-17-2265-2024, https://doi.org/10.5194/gmd-17-2265-2024, 2024
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Here, we project future climate across the western United States through the end of the 21st century using a regional climate model, embedded within 16 latest-generation global climate models, to provide the community with a high-resolution physically based ensemble of climate data for use at local scales. Strengths and weaknesses of the data are frankly discussed as we overview the downscaled dataset.
Romain Pilon and Daniela I. V. Domeisen
Geosci. Model Dev., 17, 2247–2264, https://doi.org/10.5194/gmd-17-2247-2024, https://doi.org/10.5194/gmd-17-2247-2024, 2024
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This paper introduces a new method for detecting atmospheric cloud bands to identify long convective cloud bands that extend from the tropics to the midlatitudes. The algorithm allows for easy use and enables researchers to study the life cycle and climatology of cloud bands and associated rainfall. This method provides insights into the large-scale processes involved in cloud band formation and their connections between different regions, as well as differences across ocean basins.
Salvatore Larosa, Domenico Cimini, Donatello Gallucci, Saverio Teodosio Nilo, and Filomena Romano
Geosci. Model Dev., 17, 2053–2076, https://doi.org/10.5194/gmd-17-2053-2024, https://doi.org/10.5194/gmd-17-2053-2024, 2024
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PyRTlib is an attractive educational tool because it provides a flexible and user-friendly way to broadly simulate how electromagnetic radiation travels through the atmosphere as it interacts with atmospheric constituents (such as gases, aerosols, and hydrometeors). PyRTlib is a so-called radiative transfer model; these are commonly used to simulate and understand remote sensing observations from ground-based, airborne, or satellite instruments.
Joffrey Dumont Le Brazidec, Pierre Vanderbecken, Alban Farchi, Grégoire Broquet, Gerrit Kuhlmann, and Marc Bocquet
Geosci. Model Dev., 17, 1995–2014, https://doi.org/10.5194/gmd-17-1995-2024, https://doi.org/10.5194/gmd-17-1995-2024, 2024
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Our research presents an innovative approach to estimating power plant CO2 emissions from satellite images of the corresponding plumes such as those from the forthcoming CO2M satellite constellation. The exploitation of these images is challenging due to noise and meteorological uncertainties. To overcome these obstacles, we use a deep learning neural network trained on simulated CO2 images. Our method outperforms alternatives, providing a positive perspective for the analysis of CO2M images.
Kyoung-Min Kim, Si-Wan Kim, Seunghwan Seo, Donald R. Blake, Seogju Cho, James H. Crawford, Louisa K. Emmons, Alan Fried, Jay R. Herman, Jinkyu Hong, Jinsang Jung, Gabriele G. Pfister, Andrew J. Weinheimer, Jung-Hun Woo, and Qiang Zhang
Geosci. Model Dev., 17, 1931–1955, https://doi.org/10.5194/gmd-17-1931-2024, https://doi.org/10.5194/gmd-17-1931-2024, 2024
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Three emission inventories were evaluated for East Asia using data acquired during a field campaign in 2016. The inventories successfully reproduced the daily variations of ozone and nitrogen dioxide. However, the spatial distributions of model ozone did not fully agree with the observations. Additionally, all simulations underestimated carbon monoxide and volatile organic compound (VOC) levels. Increasing VOC emissions over South Korea resulted in improved ozone simulations.
Sanam Noreen Vardag and Robert Maiwald
Geosci. Model Dev., 17, 1885–1902, https://doi.org/10.5194/gmd-17-1885-2024, https://doi.org/10.5194/gmd-17-1885-2024, 2024
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We use the atmospheric transport model GRAMM/GRAL in a Bayesian inversion to estimate urban CO2 emissions on a neighbourhood scale. We analyse the effect of varying number, precision and location of CO2 sensors for CO2 flux estimation. We further test the inclusion of co-emitted species and correlation in the inversion. The study showcases the general usefulness of GRAMM/GRAL in measurement network design.
Abhishek Savita, Joakim Kjellsson, Robin Pilch Kedzierski, Mojib Latif, Tabea Rahm, Sebastian Wahl, and Wonsun Park
Geosci. Model Dev., 17, 1813–1829, https://doi.org/10.5194/gmd-17-1813-2024, https://doi.org/10.5194/gmd-17-1813-2024, 2024
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The OpenIFS model is used to examine the impact of horizontal resolutions (HR) and model time steps. We find that the surface wind biases over the oceans, in particular the Southern Ocean, are sensitive to the model time step and HR, with the HR having the smallest biases. When using a coarse-resolution model with a shorter time step, a similar improvement is also found. Climate biases can be reduced in the OpenIFS model at a cheaper cost by reducing the time step rather than increasing the HR.
Ferdinand Briegel, Jonas Wehrle, Dirk Schindler, and Andreas Christen
Geosci. Model Dev., 17, 1667–1688, https://doi.org/10.5194/gmd-17-1667-2024, https://doi.org/10.5194/gmd-17-1667-2024, 2024
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We present a new approach to model heat stress in cities using artificial intelligence (AI). We show that the AI model is fast in terms of prediction but accurate when evaluated with measurements. The fast-predictive AI model enables several new potential applications, including heat stress prediction and warning; downscaling of potential future climates; evaluation of adaptation effectiveness; and, more fundamentally, development of guidelines to support urban planning and policymaking.
Hauke Schmidt, Sebastian Rast, Jiawei Bao, Amrit Cassim, Shih-Wei Fang, Diego Jimenez-de la Cuesta, Paul Keil, Lukas Kluft, Clarissa Kroll, Theresa Lang, Ulrike Niemeier, Andrea Schneidereit, Andrew I. L. Williams, and Bjorn Stevens
Geosci. Model Dev., 17, 1563–1584, https://doi.org/10.5194/gmd-17-1563-2024, https://doi.org/10.5194/gmd-17-1563-2024, 2024
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A recent development in numerical simulations of the global atmosphere is the increase in horizontal resolution to grid spacings of a few kilometers. However, the vertical grid spacing of these models has not been reduced at the same rate as the horizontal grid spacing. Here, we assess the effects of much finer vertical grid spacings, in particular the impacts on cloud quantities and the atmospheric energy balance.
Tao Zheng, Sha Feng, Jeffrey Steward, Xiaoxu Tian, David Baker, and Martin Baxter
Geosci. Model Dev., 17, 1543–1562, https://doi.org/10.5194/gmd-17-1543-2024, https://doi.org/10.5194/gmd-17-1543-2024, 2024
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The tangent linear and adjoint models have been successfully implemented in the MPAS-CO2 system, which has undergone rigorous accuracy testing. This development lays the groundwork for a global carbon flux data assimilation system, which offers the flexibility of high-resolution focus on specific areas, while maintaining a coarser resolution elsewhere. This approach significantly reduces computational costs and is thus perfectly suited for future CO2 geostationery and imager satellites.
Kelvin H. Bates, Mathew J. Evans, Barron H. Henderson, and Daniel J. Jacob
Geosci. Model Dev., 17, 1511–1524, https://doi.org/10.5194/gmd-17-1511-2024, https://doi.org/10.5194/gmd-17-1511-2024, 2024
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Accurate representation of rates and products of chemical reactions in atmospheric models is crucial for simulating concentrations of pollutants and climate forcers. We update the widely used GEOS-Chem atmospheric chemistry model with reaction parameters from recent compilations of experimental data and demonstrate the implications for key atmospheric chemical species. The updates decrease tropospheric CO mixing ratios and increase stratospheric nitrogen oxide mixing ratios, among other changes.
François Roberge, Alejandro Di Luca, René Laprise, Philippe Lucas-Picher, and Julie Thériault
Geosci. Model Dev., 17, 1497–1510, https://doi.org/10.5194/gmd-17-1497-2024, https://doi.org/10.5194/gmd-17-1497-2024, 2024
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Our study addresses a challenge in dynamical downscaling using regional climate models, focusing on the lack of small-scale features near the boundaries. We introduce a method to identify this “spatial spin-up” in precipitation simulations. Results show spin-up distances up to 300 km, varying by season and driving variable. Double nesting with comprehensive variables (e.g. microphysical variables) offers advantages. Findings will help optimize simulations for better climate projections.
Eloisa Raluy-López, Juan Pedro Montávez, and Pedro Jiménez-Guerrero
Geosci. Model Dev., 17, 1469–1495, https://doi.org/10.5194/gmd-17-1469-2024, https://doi.org/10.5194/gmd-17-1469-2024, 2024
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Atmospheric rivers (ARs) represent a significant source of water but are also related to extreme precipitation events. Here, we present a new regional-scale AR identification algorithm and apply it to three simulations that include aerosol interactions at different levels. The results show that aerosols modify the intensity and trajectory of ARs and redistribute the AR-related precipitation. Thus, the correct inclusion of aerosol effects is important in the simulation of AR behavior.
Sofía Gómez Maqueo Anaya, Dietrich Althausen, Matthias Faust, Holger Baars, Bernd Heinold, Julian Hofer, Ina Tegen, Albert Ansmann, Ronny Engelmann, Annett Skupin, Birgit Heese, and Kerstin Schepanski
Geosci. Model Dev., 17, 1271–1295, https://doi.org/10.5194/gmd-17-1271-2024, https://doi.org/10.5194/gmd-17-1271-2024, 2024
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Mineral dust aerosol particles vary greatly in their composition depending on source region, which leads to different physicochemical properties. Most atmosphere–aerosol models consider mineral dust aerosols to be compositionally homogeneous, which ultimately increases model uncertainty. Here, we present an approach to explicitly consider the heterogeneity of the mineralogical composition for simulations of the Saharan atmospheric dust cycle with regard to dust transport towards the Atlantic.
Alexandros Milousis, Alexandra P. Tsimpidi, Holger Tost, Spyros N. Pandis, Athanasios Nenes, Astrid Kiendler-Scharr, and Vlassis A. Karydis
Geosci. Model Dev., 17, 1111–1131, https://doi.org/10.5194/gmd-17-1111-2024, https://doi.org/10.5194/gmd-17-1111-2024, 2024
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This study aims to evaluate the newly developed ISORROPIA-lite aerosol thermodynamic module within the EMAC model and explore discrepancies in global atmospheric simulations of aerosol composition and acidity by utilizing different aerosol phase states. Even though local differences were found in regions where the RH ranged from 20 % to 60 %, on a global scale the results are similar. Therefore, ISORROPIA-lite can be a reliable and computationally effective alternative to ISORROPIA II in EMAC.
Marie-Adèle Magnaldo, Quentin Libois, Sébastien Riette, and Christine Lac
Geosci. Model Dev., 17, 1091–1109, https://doi.org/10.5194/gmd-17-1091-2024, https://doi.org/10.5194/gmd-17-1091-2024, 2024
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With the worldwide development of the solar energy sector, the need for reliable solar radiation forecasts has significantly increased. However, meteorological models that predict, among others things, solar radiation have errors. Therefore, we wanted to know in which situtaions these errors are most significant. We found that errors mostly occur in cloudy situations, and different errors were highlighted depending on the cloud altitude. Several potential sources of errors were identified.
Dongqi Lin, Jiawei Zhang, Basit Khan, Marwan Katurji, and Laura E. Revell
Geosci. Model Dev., 17, 815–845, https://doi.org/10.5194/gmd-17-815-2024, https://doi.org/10.5194/gmd-17-815-2024, 2024
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GEO4PALM is an open-source tool to generate static input for the Parallelized Large-Eddy Simulation (PALM) model system. Geospatial static input is essential for realistic PALM simulations. However, existing tools fail to generate PALM's geospatial static input for most regions. GEO4PALM is compatible with diverse geospatial data sources and provides access to free data sets. In addition, this paper presents two application examples, which show successful PALM simulations using GEO4PALM.
Piotr Zmijewski, Piotr Dziekan, and Hanna Pawlowska
Geosci. Model Dev., 17, 759–780, https://doi.org/10.5194/gmd-17-759-2024, https://doi.org/10.5194/gmd-17-759-2024, 2024
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In computer simulations of clouds it is necessary to model the myriad of droplets that constitute a cloud. A popular method for this is to use so-called super-droplets (SDs), each representing many real droplets. It has remained a challenge to model collisions of SDs. We study how precipitation in a cumulus cloud depends on the number of SDs. Surprisingly, we do not find convergence in mean precipitation even for numbers of SDs much larger than typically used in simulations.
Roya Ghahreman, Wanmin Gong, Paul A. Makar, Alexandru Lupu, Amanda Cole, Kulbir Banwait, Colin Lee, and Ayodeji Akingunola
Geosci. Model Dev., 17, 685–707, https://doi.org/10.5194/gmd-17-685-2024, https://doi.org/10.5194/gmd-17-685-2024, 2024
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The article explores the impact of different representations of below-cloud scavenging on model biases. A new scavenging scheme and precipitation-phase partitioning improve the model's performance, with better SO42- scavenging and wet deposition of NO3- and NH4+.
Daisuke Goto, Tatsuya Seiki, Kentaroh Suzuki, Hisashi Yashiro, and Toshihiko Takemura
Geosci. Model Dev., 17, 651–684, https://doi.org/10.5194/gmd-17-651-2024, https://doi.org/10.5194/gmd-17-651-2024, 2024
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Global climate models with coarse grid sizes include uncertainties about the processes in aerosol–cloud–precipitation interactions. To reduce these uncertainties, here we performed numerical simulations using a new version of our global aerosol transport model with a finer grid size over a longer period than in our previous study. As a result, we found that the cloud microphysics module influences the aerosol distributions through both aerosol wet deposition and aerosol–cloud interactions.
Alexander de Meij, Cornelis Cuvelier, Philippe Thunis, Enrico Pisoni, and Bertrand Bessagnet
Geosci. Model Dev., 17, 587–606, https://doi.org/10.5194/gmd-17-587-2024, https://doi.org/10.5194/gmd-17-587-2024, 2024
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In our study the robustness of the model responses to emission reductions in the EU is assessed when the emission data are changed. Our findings are particularly important to better understand the uncertainties associated to the emission inventories and how these uncertainties impact the level of accuracy of the resulting air quality modelling, which is a key for designing air quality plans. Also crucial is the choice of indicator to avoid misleading interpretations of the results.
Haiqin Li, Georg A. Grell, Ravan Ahmadov, Li Zhang, Shan Sun, Jordan Schnell, and Ning Wang
Geosci. Model Dev., 17, 607–619, https://doi.org/10.5194/gmd-17-607-2024, https://doi.org/10.5194/gmd-17-607-2024, 2024
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We developed a simple and realistic method to provide aerosol emissions for aerosol-aware microphysics in a numerical weather forecast model. The cloud-radiation differences between the experimental (EXP) and control (CTL) experiments responded to the aerosol differences. The strong positive precipitation biases over North America and Europe from the CTL run were significantly reduced in the EXP run. This study shows that a realistic representation of aerosol emissions should be considered.
Giancarlo Ciarelli, Sara Tahvonen, Arineh Cholakian, Manuel Bettineschi, Bruno Vitali, Tuukka Petäjä, and Federico Bianchi
Geosci. Model Dev., 17, 545–565, https://doi.org/10.5194/gmd-17-545-2024, https://doi.org/10.5194/gmd-17-545-2024, 2024
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The terrestrial ecosystem releases large quantities of biogenic gases in the Earth's Atmosphere. These gases can effectively be converted into so-called biogenic aerosol particles and, eventually, affect the Earth's climate. Climate prediction varies greatly depending on how these processes are represented in model simulations. In this study, we present a detailed model evaluation analysis aimed at understanding the main source of uncertainty in predicting the formation of biogenic aerosols.
Jiachen Liu, Eric Chen, and Shannon L. Capps
Geosci. Model Dev., 17, 567–585, https://doi.org/10.5194/gmd-17-567-2024, https://doi.org/10.5194/gmd-17-567-2024, 2024
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Air pollution harms human life and ecosystems, but its sources are complex. Scientists and policy makers use air pollution models to advance knowledge and inform control strategies. We implemented a recently developed numeral system to relate any set of model inputs, like pollutant emissions from a given activity, to all model outputs, like concentrations of pollutants harming human health. This approach will be straightforward to update when scientists discover new processes in the atmosphere.
Kun Zheng, Qiya Tan, Huihua Ruan, Jinbiao Zhang, Cong Luo, Siyu Tang, Yunlei Yi, Yugang Tian, and Jianmei Cheng
Geosci. Model Dev., 17, 399–413, https://doi.org/10.5194/gmd-17-399-2024, https://doi.org/10.5194/gmd-17-399-2024, 2024
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Radar echo extrapolation is the common method in precipitation nowcasting. Deep learning has potential in extrapolation. However, the existing models have low prediction accuracy for heavy rainfall. In this study, the prediction accuracy is improved by suppressing the blurring effect of rain distribution and reducing the negative bias. The results show that our model has better performance, which is useful for urban operation and flood prevention.
Li Pan, Partha S. Bhattacharjee, Li Zhang, Raffaele Montuoro, Barry Baker, Jeff McQueen, Georg A. Grell, Stuart A. McKeen, Shobha Kondragunta, Xiaoyang Zhang, Gregory J. Frost, Fanglin Yang, and Ivanka Stajner
Geosci. Model Dev., 17, 431–447, https://doi.org/10.5194/gmd-17-431-2024, https://doi.org/10.5194/gmd-17-431-2024, 2024
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A GEFS-Aerosols simulation was conducted from 1 September 2019 to 30 September 2020 to evaluate the model performance of GEFS-Aerosols. The purpose of this study was to understand how aerosol chemical and physical processes affect ambient aerosol concentrations by placing aerosol wet deposition, dry deposition, reactions, gravitational deposition, and emissions into the aerosol mass balance equation.
Sean Raffuse, Susan O'Neill, and Rebecca Schmidt
Geosci. Model Dev., 17, 381–397, https://doi.org/10.5194/gmd-17-381-2024, https://doi.org/10.5194/gmd-17-381-2024, 2024
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Large wildfires are increasing throughout the western United States, and wildfire smoke is hazardous to public health. We developed a suite of tools called rapidfire for estimating particle pollution during wildfires using routinely available data sets. rapidfire uses official air monitoring, satellite data, meteorology, smoke modeling, and low-cost sensors. Estimates from rapidfire compare well with ground monitors and are being used in public health studies across California.
Manuel F. Schmid, Marco G. Giometto, Gregory A. Lawrence, and Marc B. Parlange
Geosci. Model Dev., 17, 321–333, https://doi.org/10.5194/gmd-17-321-2024, https://doi.org/10.5194/gmd-17-321-2024, 2024
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Turbulence-resolving flow models have strict performance requirements, as simulations often run for weeks using hundreds of processes. Many flow scenarios also require the flexibility to modify physical and numerical models for problem-specific requirements. With a new code written in Julia we hope to make such adaptations easier without compromising on performance. In this paper we discuss the modeling approach and present validation and performance results.
Marie-Noëlle Bouin, Cindy Lebeaupin Brossier, Sylvie Malardel, Aurore Voldoire, and César Sauvage
Geosci. Model Dev., 17, 117–141, https://doi.org/10.5194/gmd-17-117-2024, https://doi.org/10.5194/gmd-17-117-2024, 2024
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In numerical models, the turbulent exchanges of heat and momentum at the air–sea interface are not represented explicitly but with parameterisations depending on the surface parameters. A new parameterisation of turbulent fluxes (WASP) has been implemented in the surface model SURFEX v8.1 and validated on four case studies. It combines a close fit to observations including cyclonic winds, a dependency on the wave growth rate, and the possibility of being used in atmosphere–wave coupled models.
Michal Belda, Nina Benešová, Jaroslav Resler, Peter Huszár, Ondřej Vlček, Pavel Krč, Jan Karlický, Pavel Juruš, and Kryštof Eben
EGUsphere, https://doi.org/10.5194/egusphere-2023-2740, https://doi.org/10.5194/egusphere-2023-2740, 2024
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For modeling atmospheric chemistry, it is necessary to provide data on emissions of pollutants. These can come from various sources and in various forms and preprocessing of the data to be ingestible by chemistry models can be quite challenging. We developed the FUME processor to use a database layer that internally transforms all input data into a rigid structure facilitating further processing to allow emission processing from continental to street scale.
Zehua Bai, Qizhong Wu, Kai Cao, Yiming Sun, and Huaqiong Cheng
EGUsphere, https://doi.org/10.5194/egusphere-2023-2962, https://doi.org/10.5194/egusphere-2023-2962, 2024
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There are relatively limited researches on the application of scientific computing on RISC CPU platforms. The MIPS architecture CPUs, a type of RISC CPU, have distinct advantages in energy efficiency and scalability. In this study, the air quality modeling system can run stably on MIPS CPU platform, and the experiment results verify the stability of scientific computing on the platform. The work provides a technical foundation for the scientific application based on MIPS CPU platforms.
Lukas Fehr, Chris McLinden, Debora Griffin, Daniel Zawada, Doug Degenstein, and Adam Bourassa
Geosci. Model Dev., 16, 7491–7507, https://doi.org/10.5194/gmd-16-7491-2023, https://doi.org/10.5194/gmd-16-7491-2023, 2023
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This work highlights upgrades to SASKTRAN, a model that simulates sunlight interacting with the atmosphere to help measure trace gases. The upgrades were verified by detailed comparisons between different numerical methods. A case study was performed using SASKTRAN’s multidimensional capabilities, which found that ignoring horizontal variation in the atmosphere (a common practice in the field) can introduce non-negligible errors where there is snow or high pollution.
Sylvain Mailler, Romain Pennel, Laurent Menut, and Arineh Cholakian
Geosci. Model Dev., 16, 7509–7526, https://doi.org/10.5194/gmd-16-7509-2023, https://doi.org/10.5194/gmd-16-7509-2023, 2023
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We show that a new advection scheme named PPM + W (piecewise parabolic method + Walcek) offers geoscientific modellers an alternative, high-performance scheme designed for Cartesian-grid advection, with improved performance over the classical PPM scheme. The computational cost of PPM + W is not higher than that of PPM. With improved accuracy and controlled computational cost, this new scheme may find applications in chemistry-transport models, ocean models or atmospheric circulation models.
David R. Shaw, Toby J. Carter, Helen L. Davies, Ellen Harding-Smith, Elliott C. Crocker, Georgia Beel, Zixu Wang, and Nicola Carslaw
Geosci. Model Dev., 16, 7411–7431, https://doi.org/10.5194/gmd-16-7411-2023, https://doi.org/10.5194/gmd-16-7411-2023, 2023
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Exposure to air pollution is one of the greatest risks to human health, and it is indoors, where we spend upwards of 90 % of our time, that our exposure is greatest. The INdoor CHEMical model in Python (INCHEM-Py) is a new, community-led box model that tracks the evolution and fate of atmospheric chemical pollutants indoors. We have shown the processes simulated by INCHEM-Py, its ability to model experimental data and how it may be used to develop further understanding of indoor air chemistry.
Willem E. van Caspel, David Simpson, Jan Eiof Jonson, Anna M. K. Benedictow, Yao Ge, Alcide di Sarra, Giandomenico Pace, Massimo Vieno, Hannah L. Walker, and Mathew R. Heal
Geosci. Model Dev., 16, 7433–7459, https://doi.org/10.5194/gmd-16-7433-2023, https://doi.org/10.5194/gmd-16-7433-2023, 2023
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Radiation coming from the sun is essential to atmospheric chemistry, driving the breakup, or photodissociation, of atmospheric molecules. This in turn affects the chemical composition and reactivity of the atmosphere. The representation of photodissociation effects is therefore essential in atmospheric chemistry modeling. One such model is the EMEP MSC-W model, for which a new way of calculating the photodissociation rates is tested and evaluated in this paper.
Jungmin Lee, Walter M. Hannah, and David C. Bader
Geosci. Model Dev., 16, 7275–7287, https://doi.org/10.5194/gmd-16-7275-2023, https://doi.org/10.5194/gmd-16-7275-2023, 2023
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Representing accurate land–atmosphere interaction processes is overlooked in weather and climate models. In this study, we propose three methods to represent land–atmosphere coupling in the Energy Exascale Earth System Model (E3SM) with the Multi-scale Modeling Framework (MMF) approach. In this study, we introduce spatially homogeneous and heterogeneous land–atmosphere interaction processes within the cloud-resolving model domain. Our 5-year simulations reveal only small differences.
Laurent Menut, Bertrand Bessagnet, Arineh Cholakian, Guillaume Siour, Sylvain Mailler, and Romain Pennel
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-209, https://doi.org/10.5194/gmd-2023-209, 2023
Revised manuscript accepted for GMD
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This study is about the modelling of the atmospheric composition in Europe and during the summer 2022, when massive wildfires were observed. It is a sensitivity study dedicated to the relative impact of two modelling processes able to modify the meteorology used for the calculation of the atmospheric chemistry and transport of pollutants.
Rohith Muraleedharan Thundathil, Florian Zus, Galina Dick, and Jens Wickert
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-202, https://doi.org/10.5194/gmd-2023-202, 2023
Revised manuscript accepted for GMD
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Global Navigation Satellite Systems provide moisture observations through its densely distributed ground station network. In this research, we assimilated a new type of observation called tropospheric gradient observations, which was never incorporated into a weather model. Here, we have developed a forward operator for gradient observations and performed impact studies. Promising improvements were observed in the humidity fields of the model in the assimilation study.
Liangke Huang, Shengwei Lan, Ge Zhu, Fade Chen, Junyu Li, and Lilong Liu
Geosci. Model Dev., 16, 7223–7235, https://doi.org/10.5194/gmd-16-7223-2023, https://doi.org/10.5194/gmd-16-7223-2023, 2023
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The existing zenith tropospheric delay (ZTD) models have limitations such as using a single fitting function, neglecting daily cycle variations, and relying on only one resolution grid data point for modeling. This model considers the daily cycle variation and latitude factor of ZTD, using the sliding window algorithm based on ERA5 atmospheric reanalysis data. The ZTD data from 545 radiosonde stations and MERRA-2 atmospheric reanalysis data are used to validate the accuracy of the GGZTD-P model.
Jonathan J. Guerrette, Zhiquan Liu, Chris Snyder, Byoung-Joo Jung, Craig S. Schwartz, Junmei Ban, Steven Vahl, Yali Wu, Ivette Hernández Baños, Yonggang G. Yu, Soyoung Ha, Yannick Trémolet, Thomas Auligné, Clementine Gas, Benjamin Ménétrier, Anna Shlyaeva, Mark Miesch, Stephen Herbener, Emily Liu, Daniel Holdaway, and Benjamin T. Johnson
Geosci. Model Dev., 16, 7123–7142, https://doi.org/10.5194/gmd-16-7123-2023, https://doi.org/10.5194/gmd-16-7123-2023, 2023
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We demonstrate an ensemble of variational data assimilations (EDA) with the Model for Prediction Across Scales and the Joint Effort for Data assimilation Integration (JEDI) software framework. When compared to 20-member ensemble forecasts from operational initial conditions, those from 80-member EDA-generated initial conditions improve flow-dependent error covariances and subsequent 10 d forecasts. These experiments are repeatable for any atmospheric model with a JEDI interface.
Junyu Li, Yuxin Wang, Lilong Liu, Yibin Yao, Liangke Hang, and Feijuan Li
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-201, https://doi.org/10.5194/gmd-2023-201, 2023
Revised manuscript accepted for GMD
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In this study, we have developed a model (RF-PWV) to characterize PWV variation with altitude in the study area. The RF-PWV can significantly reduce errors in vertical correction, enhance PWV fusion product accuracy, and provide insights into PWV vertical distribution, thereby contributing to climate research.
Minjie Zheng, Hongyu Liu, Florian Adolphi, Raimund Muscheler, Zhengyao Lu, Mousong Wu, and Nønne L. Prisle
Geosci. Model Dev., 16, 7037–7057, https://doi.org/10.5194/gmd-16-7037-2023, https://doi.org/10.5194/gmd-16-7037-2023, 2023
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The radionuclides 7Be and 10Be are useful tracers for atmospheric transport studies. Here we use the GEOS-Chem to simulate 7Be and 10Be with different production rates: the default production rate in GEOS-Chem and two from the state-of-the-art beryllium production model. We demonstrate that reduced uncertainties in the production rates can enhance the utility of 7Be and 10Be as tracers for evaluating transport and scavenging processes in global models.
Wenxing Jia, Xiaoye Zhang, Hong Wang, Yaqiang Wang, Deying Wang, Junting Zhong, Wenjie Zhang, Lei Zhang, Lifeng Guo, Yadong Lei, Jizhi Wang, Yuanqin Yang, and Yi Lin
Geosci. Model Dev., 16, 6833–6856, https://doi.org/10.5194/gmd-16-6833-2023, https://doi.org/10.5194/gmd-16-6833-2023, 2023
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In addition to the dominant role of the PBL scheme on the results of the meteorological field, many factors in the model are influenced by large uncertainties. This study focuses on the uncertainties that influence numerical simulation results (including horizontal resolution, vertical resolution, near-surface scheme, initial and boundary conditions, underlying surface update, and update of model version), hoping to provide a reference for scholars conducting research on the model.
Owen K. Hughes and Christiane Jablonowski
Geosci. Model Dev., 16, 6805–6831, https://doi.org/10.5194/gmd-16-6805-2023, https://doi.org/10.5194/gmd-16-6805-2023, 2023
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Atmospheric models benefit from idealized tests that assess their accuracy in a simpler simulation. A new test with artificial mountains is developed for models on a spherical earth. The mountains trigger the development of both planetary-scale and small-scale waves. These can be analyzed in dry or moist environments, with a simple rainfall mechanism. Four atmospheric models are intercompared. This sheds light on the pros and cons of the model design and the impact of mountains on the flow.
Zhongwei Luo, Yan Han, Kun Hua, Yufen Zhang, Jianhui Wu, Xiaohui Bi, Qili Dai, Baoshuang Liu, Yang Chen, Xin Long, and Yinchang Feng
Geosci. Model Dev., 16, 6757–6771, https://doi.org/10.5194/gmd-16-6757-2023, https://doi.org/10.5194/gmd-16-6757-2023, 2023
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This study explores how the variation in the source profiles adopted in chemical transport models (CTMs) impacts the simulated results of chemical components in PM2.5 based on sensitivity analysis. The impact on PM2.5 components cannot be ignored, and its influence can be transmitted and linked between components. The representativeness and timeliness of the source profile should be paid adequate attention in air quality simulation.
Ulrich Voggenberger, Leopold Haimberger, Federico Ambrogi, and Paul Poli
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-215, https://doi.org/10.5194/gmd-2023-215, 2023
Revised manuscript accepted for GMD
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The paper presents a method for calculating balloon drift from historical radiosonde ascent data. This drift can reach distances of several hundred kilometres and is often neglected. Verification shows the beneficial impact of the more accurate balloon position on model assimilation. The method is not limited to radiosondes, but would also work for drop sondes, ozone sondes, or any other in-situ sonde carried by the wind in the pre-GNSS era, provided the necessary information is available.
Jelena Radovic, Michal Belda, Jaroslav Resler, Kryštof Eben, Martin Bureš, Jan Geletič, Pavel Krč, Hynek Řezníček, and Vladimír Fuka
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-197, https://doi.org/10.5194/gmd-2023-197, 2023
Revised manuscript accepted for GMD
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The initial and boundary conditions are of crucial importance for numerical model (e.g., PALM model) validation studies and have a large influence on the model results especially in the case of studying the atmosphere of a real, complex, and densely built urban environments. Our experiments with different driving conditions for the LES model PALM show its strong dependency on them which is important for the proper separation of errors coming from the boundary conditions and the model itself.
Jan Clemens, Lars Hoffmann, Bärbel Vogel, Sabine Grießbach, and Nicole Thomas
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-214, https://doi.org/10.5194/gmd-2023-214, 2023
Revised manuscript accepted for GMD
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Lagrangian transport models simulate the transport of air masses in the atmosphere. For example, one model (CLaMS), is well suited for calculating transport, as it uses a special coordinate system and special vertical wind. However, it only runs inefficiently on modern supercomputers. Hence, we have implemented the benefits of CLaMS into a new model (MPTRAC), which is already highly efficient on modern supercomputers. Finally, in extensive tests, we showed that CLaMS and MPTRAC agree very well.
Cited articles
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Technical note: Monte Carlo genetic algorithm (MCGA) for model analysis of multiphase chemical kinetics to determine transport and reaction rate coefficients using multiple experimental data sets, Atmos. Chem. Phys., 17, 8021–8029, https://doi.org/10.5194/acp-17-8021-2017, 2017.
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Hosny, N. A., Fitzgerald, C., Vyšniauskas, A., Athanasiadis, A., Berkemeier, T., Uygur, N., Pöschl, U., Shiraiwa, M., Kalberer, M., Pope, F. D., and Kuimova, M. K.:
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JlBox v1.1: a Julia-based multi-phase atmospheric chemistry box model, Geosci. Model Dev., 14, 2187–2203, https://doi.org/10.5194/gmd-14-2187-2021, 2021.
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Coexistence of three liquid phases in individual atmospheric aerosol particles, P. Natl. Acad. Sci. USA, 118, e2102512118, https://doi.org/10.1073/pnas.2102512118, 2021.
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The reaction of oleic acid monolayers with gas-phase ozone at the air water interface: The effect of sub-phase viscosity, and inert secondary components, Phys. Chem. Chem. Phys., 22, 28032–28044, https://doi.org/10.1039/d0cp03934a, 2020.
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Lakey, P. S. J., Eichler, C. M. A., Wang, C., Little, J. C., and Shiraiwa, M.:
Kinetic multi-layer model of film formation, growth, and chemistry (KM-FILM): Boundary layer processes, multi-layer adsorption, bulk diffusion, and heterogeneous reactions, Indoor Air, 31, ina.12854, https://doi.org/10.1111/ina.12854, 2021.
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Short summary
MultilayerPy is a Python-based framework facilitating the creation, running and optimisation of state-of-the-art kinetic multi-layer models of aerosol and film processes. Models can be fit to data with local and global optimisation algorithms along with a statistical sampling algorithm, which quantifies the uncertainty in optimised model parameters. This “modelling study in a box” enables more reproducible and reliable results, with model code and outputs produced in a human-readable way.
MultilayerPy is a Python-based framework facilitating the creation, running and optimisation of...
