Articles | Volume 15, issue 14
https://doi.org/10.5194/gmd-15-5713-2022
https://doi.org/10.5194/gmd-15-5713-2022
Development and technical paper
 | 
22 Jul 2022
Development and technical paper |  | 22 Jul 2022

Use of genetic algorithms for ocean model parameter optimisation: a case study using PISCES-v2_RC for North Atlantic particulate organic carbon

Marcus Falls, Raffaele Bernardello, Miguel Castrillo, Mario Acosta, Joan Llort, and Martí Galí

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Cited articles

Anav, A., Friedlingstein, P., Kidston, M., Bopp, L., Ciais, P., Cox, P., Jones, C., Jung, M., Myneni, R., and Zhu, R.: Evaluating the Land and Ocean Components of the Global Carbon Cycle in the CMIP5 Earth System Models, J. Climate, 26, 6801–6843, https://doi.org/10.1175/JCLI-D-12-00417.1, 2013. a
Aumont, O., Ethé, C., Tagliabue, A., Bopp, L., and Gehlen, M.: PISCES-v2: an ocean biogeochemical model for carbon and ecosystem studies, Geosci. Model Dev., 8, 2465–2513, https://doi.org/10.5194/gmd-8-2465-2015, 2015. a, b, c, d, e, f, g
Aumont, O., van Hulten, M., Roy-Barman, M., Dutay, J.-C., Éthé, C., and Gehlen, M.: Variable reactivity of particulate organic matter in a global ocean biogeochemical model, Biogeosciences, 14, 2321–2341, https://doi.org/10.5194/bg-14-2321-2017, 2017. a, b, c, d
Ayata, S. D., Lévy, M., Aumont, O., Sciandra, A., Sainte-Marie, J., Tagliabue, A., and Bernard, O.: Phytoplankton growth formulation in marine ecosystem models: Should we take into account photo-acclimation and variable stoichiometry in oligotrophic areas?, J. Marine Syst., 125, 29–40, https://doi.org/10.1016/j.jmarsys.2012.12.010, 2013. a, b, c
Bagniewski, W., Fennel, K., Perry, M. J., and D'Asaro, E. A.: Optimizing models of the North Atlantic spring bloom using physical, chemical and bio-optical observations from a Lagrangian float, Biogeosciences, 8, 1291–1307, https://doi.org/10.5194/bg-8-1291-2011, 2011. a
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This paper describes and tests a method which uses a genetic algorithm (GA), a type of optimisation algorithm, on an ocean biogeochemical model. The aim is to produce a set of numerical parameters that best reflect the observed data of particulate organic carbon in a specific region of the ocean. We show that the GA can provide optimised model parameters in a robust and efficient manner and can also help detect model limitations, ultimately leading to a reduction in the model uncertainties.