Articles | Volume 14, issue 6
https://doi.org/10.5194/gmd-14-3789-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-14-3789-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Model evaluation paper
| 
24 Jun 2021
Model evaluation paper |
| 24 Jun 2021
| 24 Jun 2021
Modeling gas exchange and biomass production in West African Sahelian and Sudanian ecological zones
Jaber Rahimi
Karlsruhe Institute of Technology, Institute of Meteorology and
Climate Research, Atmospheric Environmental Research (IMK-IFU),
Garmisch-Partenkirchen, Germany
Expedit Evariste Ago
Laboratoire d'Ecologie Appliquée, Faculté des Sciences
Agronomiques, Université d'Abomey-Calavi, Cotonou, Benin
Biodiversity and Landscape Unit, Université de Liège Gembloux
Agro-Bio Tech, Gembloux, Belgium
Augustine Ayantunde
International Livestock Research Institute (ILRI), Ouagadougou,
Burkina Faso
Sina Berger
Karlsruhe Institute of Technology, Institute of Meteorology and
Climate Research, Atmospheric Environmental Research (IMK-IFU),
Garmisch-Partenkirchen, Germany
Regional Climate and Hydrology Research
Group, University of Augsburg, Augsburg, Germany
Jan Bogaert
Biodiversity and Landscape Unit, Université de Liège Gembloux
Agro-Bio Tech, Gembloux, Belgium
Klaus Butterbach-Bahl
Karlsruhe Institute of Technology, Institute of Meteorology and
Climate Research, Atmospheric Environmental Research (IMK-IFU),
Garmisch-Partenkirchen, Germany
International Livestock Research Institute (ILRI), Nairobi, Kenya
Bernard Cappelaere
HydroSciences Montpellier, Université Montpellier, IRD, CNRS,
Montpellier, France
Jean-Martial Cohard
IRD, CNRS, Université Grenoble Alpes, Grenoble, France
Jérôme Demarty
HydroSciences Montpellier, Université Montpellier, IRD, CNRS,
Montpellier, France
Abdoul Aziz Diouf
Centre de Suivi Ecologique (CSE), Dakar, Senegal
Ulrike Falk
Satellite-based Climate Monitoring, Deutscher Wetterdienst (DWD),
Offenbach, Germany
Edwin Haas
Karlsruhe Institute of Technology, Institute of Meteorology and
Climate Research, Atmospheric Environmental Research (IMK-IFU),
Garmisch-Partenkirchen, Germany
Pierre Hiernaux
Géosciences Environnement Toulouse (GET), CNRS, IRD, UPS,
Toulouse, France
Pastoralisme Conseil, Caylus, France
David Kraus
Karlsruhe Institute of Technology, Institute of Meteorology and
Climate Research, Atmospheric Environmental Research (IMK-IFU),
Garmisch-Partenkirchen, Germany
Olivier Roupsard
CIRAD, UMR Eco&Sols, BP1386, CP18524, Dakar, Senegal
Eco&Sols, Université Montpellier, CIRAD, INRAE, IRD,
Institut Agro, Montpellier, France
LMI IESOL, Centre IRD-ISRA de Bel Air, BP1386, CP18524, Dakar,
Senegal
Clemens Scheer
Karlsruhe Institute of Technology, Institute of Meteorology and
Climate Research, Atmospheric Environmental Research (IMK-IFU),
Garmisch-Partenkirchen, Germany
Amit Kumar Srivastava
Institute of Crop Science and Resource Conservation, University of
Bonn, Bonn, Germany
Torbern Tagesson
Department of Geosciences and Natural Resource Management,
University of Copenhagen, Copenhagen, Denmark
Department of Physical Geography and Ecosystem Sciences, Lund
University, Lund, Sweden
Karlsruhe Institute of Technology, Institute of Meteorology and
Climate Research, Atmospheric Environmental Research (IMK-IFU),
Garmisch-Partenkirchen, Germany
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Wim Verbruggen, Guy Schurgers, Stéphanie Horion, Jonas Ardö, Paulo N. Bernardino, Bernard Cappelaere, Jérôme Demarty, Rasmus Fensholt, Laurent Kergoat, Thomas Sibret, Torbern Tagesson, and Hans Verbeeck
Biogeosciences, 18, 77–93, https://doi.org/10.5194/bg-18-77-2021, https://doi.org/10.5194/bg-18-77-2021, 2021
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A large part of Earth's land surface is covered by dryland ecosystems, which are subject to climate extremes that are projected to increase under future climate scenarios. By using a mathematical vegetation model, we studied the impact of single years of extreme rainfall on the vegetation in the Sahel. We found a contrasting response of grasses and trees to these extremes, strongly dependent on the way precipitation is spread over the rainy season, as well as a long-term impact on CO2 uptake.
Virginie Moreaux, Simon Martel, Alexandre Bosc, Delphine Picart, David Achat, Christophe Moisy, Raphael Aussenac, Christophe Chipeaux, Jean-Marc Bonnefond, Soisick Figuères, Pierre Trichet, Rémi Vezy, Vincent Badeau, Bernard Longdoz, André Granier, Olivier Roupsard, Manuel Nicolas, Kim Pilegaard, Giorgio Matteucci, Claudy Jolivet, Andrew T. Black, Olivier Picard, and Denis Loustau
Geosci. Model Dev., 13, 5973–6009, https://doi.org/10.5194/gmd-13-5973-2020, https://doi.org/10.5194/gmd-13-5973-2020, 2020
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The model GO+ describes the functioning of managed forests based upon biophysical and biogeochemical processes. It accounts for the impacts of forest operations on energy, water and carbon exchanges within the soil–vegetation–atmosphere continuum. It includes versatile descriptions of management operations. Its sensitivity and uncertainty are detailed and predictions are compared with observations about mass and energy exchanges, hydrological data, and tree growth variables from different sites.
Yuan Zhang, Ana Bastos, Fabienne Maignan, Daniel Goll, Olivier Boucher, Laurent Li, Alessandro Cescatti, Nicolas Vuichard, Xiuzhi Chen, Christof Ammann, M. Altaf Arain, T. Andrew Black, Bogdan Chojnicki, Tomomichi Kato, Ivan Mammarella, Leonardo Montagnani, Olivier Roupsard, Maria J. Sanz, Lukas Siebicke, Marek Urbaniak, Francesco Primo Vaccari, Georg Wohlfahrt, Will Woodgate, and Philippe Ciais
Geosci. Model Dev., 13, 5401–5423, https://doi.org/10.5194/gmd-13-5401-2020, https://doi.org/10.5194/gmd-13-5401-2020, 2020
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We improved the ORCHIDEE LSM by distinguishing diffuse and direct light in canopy and evaluated the new model with observations from 159 sites. Compared with the old model, the new model has better sunny GPP and reproduced the diffuse light fertilization effect observed at flux sites. Our simulations also indicate different mechanisms causing the observed GPP enhancement under cloudy conditions at different times. The new model has the potential to study large-scale impacts of aerosol changes.
Petra Lasch-Born, Felicitas Suckow, Christopher P. O. Reyer, Martin Gutsch, Chris Kollas, Franz-Werner Badeck, Harald K. M. Bugmann, Rüdiger Grote, Cornelia Fürstenau, Marcus Lindner, and Jörg Schaber
Geosci. Model Dev., 13, 5311–5343, https://doi.org/10.5194/gmd-13-5311-2020, https://doi.org/10.5194/gmd-13-5311-2020, 2020
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The process-based model 4C has been developed to study climate impacts on forests and is now freely available as an open-source tool. This paper provides a comprehensive description of the 4C version (v2.2) for scientific users of the model and presents an evaluation of 4C. The evaluation focused on forest growth, carbon water, and heat fluxes. We conclude that 4C is widely applicable, reliable, and ready to be released to the scientific community to use and further develop the model.
Waly Faye, Awa Niang Fall, Didier Orange, Frédéric Do, Olivier Roupsard, and Alioune Kane
Proc. IAHS, 383, 391–399, https://doi.org/10.5194/piahs-383-391-2020, https://doi.org/10.5194/piahs-383-391-2020, 2020
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People from the Senegalese Peanut Basin deal with a dramatic increase of water scarcity due both to a rain deficit and a surface water salinization. We carried out the analysis of daily rain from 1950 to 2015 and water salinity of 78 wells on 300 km2. We confirm a climatic break in 1970 leaded a long dry period until 2009, with a decreased of the rainy day number per year, probably driving a large extension of well salinization and salt soil crusting accelerated by a large tidal event in 1984.
Chris R. Flechard, Andreas Ibrom, Ute M. Skiba, Wim de Vries, Marcel van Oijen, David R. Cameron, Nancy B. Dise, Janne F. J. Korhonen, Nina Buchmann, Arnaud Legout, David Simpson, Maria J. Sanz, Marc Aubinet, Denis Loustau, Leonardo Montagnani, Johan Neirynck, Ivan A. Janssens, Mari Pihlatie, Ralf Kiese, Jan Siemens, André-Jean Francez, Jürgen Augustin, Andrej Varlagin, Janusz Olejnik, Radosław Juszczak, Mika Aurela, Daniel Berveiller, Bogdan H. Chojnicki, Ulrich Dämmgen, Nicolas Delpierre, Vesna Djuricic, Julia Drewer, Eric Dufrêne, Werner Eugster, Yannick Fauvel, David Fowler, Arnoud Frumau, André Granier, Patrick Gross, Yannick Hamon, Carole Helfter, Arjan Hensen, László Horváth, Barbara Kitzler, Bart Kruijt, Werner L. Kutsch, Raquel Lobo-do-Vale, Annalea Lohila, Bernard Longdoz, Michal V. Marek, Giorgio Matteucci, Marta Mitosinkova, Virginie Moreaux, Albrecht Neftel, Jean-Marc Ourcival, Kim Pilegaard, Gabriel Pita, Francisco Sanz, Jan K. Schjoerring, Maria-Teresa Sebastià, Y. Sim Tang, Hilde Uggerud, Marek Urbaniak, Netty van Dijk, Timo Vesala, Sonja Vidic, Caroline Vincke, Tamás Weidinger, Sophie Zechmeister-Boltenstern, Klaus Butterbach-Bahl, Eiko Nemitz, and Mark A. Sutton
Biogeosciences, 17, 1583–1620, https://doi.org/10.5194/bg-17-1583-2020, https://doi.org/10.5194/bg-17-1583-2020, 2020
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Experimental evidence from a network of 40 monitoring sites in Europe suggests that atmospheric nitrogen deposition to forests and other semi-natural vegetation impacts the carbon sequestration rates in ecosystems, as well as the net greenhouse gas balance including other greenhouse gases such as nitrous oxide and methane. Excess nitrogen deposition in polluted areas also leads to other environmental impacts such as nitrogen leaching to groundwater and other pollutant gaseous emissions.
Chris R. Flechard, Marcel van Oijen, David R. Cameron, Wim de Vries, Andreas Ibrom, Nina Buchmann, Nancy B. Dise, Ivan A. Janssens, Johan Neirynck, Leonardo Montagnani, Andrej Varlagin, Denis Loustau, Arnaud Legout, Klaudia Ziemblińska, Marc Aubinet, Mika Aurela, Bogdan H. Chojnicki, Julia Drewer, Werner Eugster, André-Jean Francez, Radosław Juszczak, Barbara Kitzler, Werner L. Kutsch, Annalea Lohila, Bernard Longdoz, Giorgio Matteucci, Virginie Moreaux, Albrecht Neftel, Janusz Olejnik, Maria J. Sanz, Jan Siemens, Timo Vesala, Caroline Vincke, Eiko Nemitz, Sophie Zechmeister-Boltenstern, Klaus Butterbach-Bahl, Ute M. Skiba, and Mark A. Sutton
Biogeosciences, 17, 1621–1654, https://doi.org/10.5194/bg-17-1621-2020, https://doi.org/10.5194/bg-17-1621-2020, 2020
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Nitrogen deposition from the atmosphere to unfertilized terrestrial vegetation such as forests can increase carbon dioxide uptake and favour carbon sequestration by ecosystems. However the data from observational networks are difficult to interpret in terms of a carbon-to-nitrogen response, because there are a number of other confounding factors, such as climate, soil physical properties and fertility, and forest age. We propose a model-based method to untangle the different influences.
Genki Katata, Rüdiger Grote, Matthias Mauder, Matthias J. Zeeman, and Masakazu Ota
Biogeosciences, 17, 1071–1085, https://doi.org/10.5194/bg-17-1071-2020, https://doi.org/10.5194/bg-17-1071-2020, 2020
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In this paper, we demonstrate that high physiological activity levels during the extremely warm winter are allocated into the below-ground biomass and only to a minor extent used for additional plant growth during early spring. This process is so far largely unaccounted for in scenario analysis using global terrestrial biosphere models, and it may lead to carbon accumulation in the soil and/or carbon loss from the soil as a response to global warming.
Tiphaine Chevallier, Kenji Fujisaki, Olivier Roupsard, Florian Guidat, Rintaro Kinoshita, Elias de Melo Viginio Filho, Peter Lehner, and Alain Albrecht
SOIL, 5, 315–332, https://doi.org/10.5194/soil-5-315-2019, https://doi.org/10.5194/soil-5-315-2019, 2019
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Soil organic carbon (SOC) is the largest terrestrial C stock. Andosols of volcanic areas hold particularly large stocks (e.g. from 24 to 72 kgC m−2 in the upper 2 m of soil) as determined via MIR spectrometry at our Costa Rican study site: a 1 km2 basin covered by coffee agroforestry. Andic soil properties explained this high variability, which did not correlate with stocks in the upper 20 cm of soil. Topography and pedogenesis are needed to understand the SOC stocks at landscape scales.
Erkan Ibraim, Benjamin Wolf, Eliza Harris, Rainer Gasche, Jing Wei, Longfei Yu, Ralf Kiese, Sarah Eggleston, Klaus Butterbach-Bahl, Matthias Zeeman, Béla Tuzson, Lukas Emmenegger, Johan Six, Stephan Henne, and Joachim Mohn
Biogeosciences, 16, 3247–3266, https://doi.org/10.5194/bg-16-3247-2019, https://doi.org/10.5194/bg-16-3247-2019, 2019
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Nitrous oxide (N2O) is an important greenhouse gas and the major stratospheric ozone-depleting substance; therefore, mitigation of anthropogenic N2O emissions is needed. To trace N2O-emitting source processes, in this study, we observed N2O isotopocules above an intensively managed grassland research site with a recently developed laser spectroscopy method. Our results indicate that the domain of denitrification or nitrifier denitrification was the major N2O source.
Eric Mougin, Mamadou Oumar Diawara, Nogmana Soumaguel, Ali Amadou Maïga, Valérie Demarez, Pierre Hiernaux, Manuela Grippa, Véronique Chaffard, and Abdramane Ba
Earth Syst. Sci. Data, 11, 675–686, https://doi.org/10.5194/essd-11-675-2019, https://doi.org/10.5194/essd-11-675-2019, 2019
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The leaf area index of Sahelian rangelands was measured between 2005 and 2017 in northern Mali. These observations collected over more than a decade, in a remote and not very accessible region, provide a relevant and unique data set that can be used for a better understanding of the Sahelian vegetation response to the current rainfall changes. The collected data can also be used for satellite product evaluation and land surface model validation.
Claire Delon, Corinne Galy-Lacaux, Dominique Serça, Erwan Personne, Eric Mougin, Marcellin Adon, Valérie Le Dantec, Benjamin Loubet, Rasmus Fensholt, and Torbern Tagesson
Biogeosciences, 16, 2049–2077, https://doi.org/10.5194/bg-16-2049-2019, https://doi.org/10.5194/bg-16-2049-2019, 2019
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In the Sahel region during the wet season, CO2 and NO are released to the atmosphere, and NH3 is deposited on the soil. During the dry season, processes are strongly reduced. This paper shows the temporal variation in these soil–atmosphere exchanges of trace gases for 2 years, their sharp increase when the first rains fall onto dry soils, and how microbial processes are involved. We use a modelling approach, which is necessary when continuous measurements are not possible in remote regions.
Basile Hector, Jean-Martial Cohard, Luc Séguis, Sylvie Galle, and Christophe Peugeot
Hydrol. Earth Syst. Sci., 22, 5867–5888, https://doi.org/10.5194/hess-22-5867-2018, https://doi.org/10.5194/hess-22-5867-2018, 2018
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The hydrological functioning of western African headwater wetlands remains poorly understood, despite their potential for small-scale farming and their role in streamflow production. We found that land cover changes significantly affect water budgets, and pedo-geological features control dry season baseflow. These are the results of virtual experiments with a physically based critical zone model evaluated against streamflow, evapotranspiration, soil moisture, water table and water storage data.
Martin Rückamp, Ulrike Falk, Katja Frieler, Stefan Lange, and Angelika Humbert
Earth Syst. Dynam., 9, 1169–1189, https://doi.org/10.5194/esd-9-1169-2018, https://doi.org/10.5194/esd-9-1169-2018, 2018
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Sea-level rise associated with changing climate is expected to pose a major challenge for societies. Based on the efforts of COP21 to limit global warming to 2.0 °C by the end of the 21st century (Paris Agreement), we simulate the future contribution of the Greenland ice sheet (GrIS) to sea-level change. The projected sea-level rise ranges between 21–38 mm by 2100
and 36–85 mm by 2300. Our results indicate that uncertainties in the projections stem from the underlying climate data.
Suzanne R. Jacobs, Edison Timbe, Björn Weeser, Mariana C. Rufino, Klaus Butterbach-Bahl, and Lutz Breuer
Hydrol. Earth Syst. Sci., 22, 4981–5000, https://doi.org/10.5194/hess-22-4981-2018, https://doi.org/10.5194/hess-22-4981-2018, 2018
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This study investigated how land use affects stream water sources and flow paths in an East African tropical montane area. Rainfall was identified as an important stream water source in the forest and smallholder agriculture sub-catchments, while springs were more important in the commercial tea plantation sub-catchment. However, 15 % or less of the stream water consisted of water with an age of less than 3 months, indicating that groundwater plays an important role in all land use types.
Christine Lac, Jean-Pierre Chaboureau, Valéry Masson, Jean-Pierre Pinty, Pierre Tulet, Juan Escobar, Maud Leriche, Christelle Barthe, Benjamin Aouizerats, Clotilde Augros, Pierre Aumond, Franck Auguste, Peter Bechtold, Sarah Berthet, Soline Bielli, Frédéric Bosseur, Olivier Caumont, Jean-Martial Cohard, Jeanne Colin, Fleur Couvreux, Joan Cuxart, Gaëlle Delautier, Thibaut Dauhut, Véronique Ducrocq, Jean-Baptiste Filippi, Didier Gazen, Olivier Geoffroy, François Gheusi, Rachel Honnert, Jean-Philippe Lafore, Cindy Lebeaupin Brossier, Quentin Libois, Thibaut Lunet, Céline Mari, Tomislav Maric, Patrick Mascart, Maxime Mogé, Gilles Molinié, Olivier Nuissier, Florian Pantillon, Philippe Peyrillé, Julien Pergaud, Emilie Perraud, Joris Pianezze, Jean-Luc Redelsperger, Didier Ricard, Evelyne Richard, Sébastien Riette, Quentin Rodier, Robert Schoetter, Léo Seyfried, Joël Stein, Karsten Suhre, Marie Taufour, Odile Thouron, Sandra Turner, Antoine Verrelle, Benoît Vié, Florian Visentin, Vincent Vionnet, and Philippe Wautelet
Geosci. Model Dev., 11, 1929–1969, https://doi.org/10.5194/gmd-11-1929-2018, https://doi.org/10.5194/gmd-11-1929-2018, 2018
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This paper presents the Meso-NH model version 5.4, which is an atmospheric non-hydrostatic research model that is applied on synoptic to turbulent scales. The model includes advanced numerical techniques and state-of-the-art physics parameterization schemes. It has been expanded to provide capabilities for a range of Earth system prediction applications such as chemistry and aerosols, electricity and lightning, hydrology, wildland fires, volcanic eruptions, and cyclones with ocean coupling.
Ulrike Falk, Damián A. López, and Adrián Silva-Busso
The Cryosphere, 12, 1211–1232, https://doi.org/10.5194/tc-12-1211-2018, https://doi.org/10.5194/tc-12-1211-2018, 2018
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The present study address the glacier–atmosphere relation on King George Island (South Shetland Islands) at the northern Antarctic Peninsula. The focus is on 5 years of glacier mass balance observations and the adaptation of a spatially distributed, physically based mass balance model. The focus is on the analysis of equilibrium line altitude and catchment runoff. The observed changes are expected to have a direct impact on environmental conditions in coastal waters and biota.
Francisco Fernandoy, Dieter Tetzner, Hanno Meyer, Guisella Gacitúa, Kirstin Hoffmann, Ulrike Falk, Fabrice Lambert, and Shelley MacDonell
The Cryosphere, 12, 1069–1090, https://doi.org/10.5194/tc-12-1069-2018, https://doi.org/10.5194/tc-12-1069-2018, 2018
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Through the geochemical analysis of the surface snow of a glacier at the northern tip of the Antarctic Peninsula, we aimed to investigate how atmosphere and ocean conditions of the surrounding region are varying under the present climate scenario. We found that meteorological conditions strongly depend on the extension of sea ice. Our results show a slight cooling of the surface air during the last decade at this site. However, the general warming tendency for the region is still on-going.
Clifton R. Sabajo, Guerric le Maire, Tania June, Ana Meijide, Olivier Roupsard, and Alexander Knohl
Biogeosciences, 14, 4619–4635, https://doi.org/10.5194/bg-14-4619-2017, https://doi.org/10.5194/bg-14-4619-2017, 2017
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From the analysis of MODIS and Landsat satellite data of the Jambi province in Indonesia, this first study on the effects of oil palm expansion on the surface temperature in Indonesia shows shows a local and regional warming effect caused by the expansion of oil palm plantations and other cash or tree crops between 2000 and 2015. The observed warming effects may affect ecosystem services, reduce water availabilty in the dry period and increase the vulnerability to fires in the province.
Laetitia Gal, Manuela Grippa, Pierre Hiernaux, Léa Pons, and Laurent Kergoat
Hydrol. Earth Syst. Sci., 21, 4591–4613, https://doi.org/10.5194/hess-21-4591-2017, https://doi.org/10.5194/hess-21-4591-2017, 2017
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The intense, prolonged Sahel drought has caused a widespread increase in surface runoff and surface waters like lakes or rivers, against all expectations. Using long-term observations and the Kineros2 hydrological model, we show that the runoff coefficient of the Agoufou watershed increased from ~ 0 to 5.5 % in 1950–2011. We attribute this phenomenon to a change in vegetation and soil surface properties, in response to the drought, rather than land–use change or rainfall regime intensification.
Tobias Houska, David Kraus, Ralf Kiese, and Lutz Breuer
Biogeosciences, 14, 3487–3508, https://doi.org/10.5194/bg-14-3487-2017, https://doi.org/10.5194/bg-14-3487-2017, 2017
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CO2 and N2O are two prominent GHGs contributing to global warming. We combined measurement and modelling to quantify GHG emissions from adjacent arable, forest and grassland sites in Germany. Measured emissions reveal seasonal patterns and management effects like fertilizer application, tillage, harvest and grazing. Modelling helps to estimate the magnitude and uncertainty of not measurable C and N fluxes and indicates missing input source, e.g. nitrate uptake from groundwater.
Torbern Tagesson, Jonas Ardö, Bernard Cappelaere, Laurent Kergoat, Abdulhakim Abdi, Stéphanie Horion, and Rasmus Fensholt
Biogeosciences, 14, 1333–1348, https://doi.org/10.5194/bg-14-1333-2017, https://doi.org/10.5194/bg-14-1333-2017, 2017
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Vegetation growth in semi-arid regions is an important sink for human-induced fossil fuel emissions of CO2 and this study addresses the strong need for improved understanding and spatially explicit estimates of CO2 uptake by semi-arid ecosystems. We show that a model incorporating photosynthetic parameters upscaled using satellite-based earth observation simulates CO2 uptake well for the Sahel, one of the largest semi-arid regions in the world.
Loise Wandera, Kaniska Mallick, Gerard Kiely, Olivier Roupsard, Matthias Peichl, and Vincenzo Magliulo
Hydrol. Earth Syst. Sci., 21, 197–215, https://doi.org/10.5194/hess-21-197-2017, https://doi.org/10.5194/hess-21-197-2017, 2017
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Upscaling instantaneous to daily evapotranspiration (ETi–ETd) is one of the central challenges in regional vegetation water-use mapping using polar orbiting satellites. Here we developed a robust ETi upscaling for global studies using the ratio between daily and instantaneous global radiation (RSd/RSi). Using data from 126 FLUXNET tower sites, this study demonstrated the RSd/RSi ratio to be the most robust factor explaining ETd/ETi variability across variable sky conditions and multiple biomes.
Rosa Maria Roman-Cuesta, Martin Herold, Mariana C. Rufino, Todd S. Rosenstock, Richard A. Houghton, Simone Rossi, Klaus Butterbach-Bahl, Stephen Ogle, Benjamin Poulter, Louis Verchot, Christopher Martius, and Sytze de Bruin
Biogeosciences, 13, 5799–5819, https://doi.org/10.5194/bg-13-5799-2016, https://doi.org/10.5194/bg-13-5799-2016, 2016
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The land use sector (AFOLU) is a pivotal component of countries' mitigation commitments under the Paris Agreement. Global land use data are therefore important to complement and fill in countries' data gaps. But how different are the existing AFOLU datasets and why? Here we contrast six AFOLU datasets for the tropics at different levels of aggregation (spatial, gases, emission sources) and point out possible reasons for the observed differences and the next steps to improve land use emissions.
Rosa Maria Roman-Cuesta, Mariana C. Rufino, Martin Herold, Klaus Butterbach-Bahl, Todd S. Rosenstock, Mario Herrero, Stephen Ogle, Changsheng Li, Benjamin Poulter, Louis Verchot, Christopher Martius, John Stuiver, and Sytze de Bruin
Biogeosciences, 13, 4253–4269, https://doi.org/10.5194/bg-13-4253-2016, https://doi.org/10.5194/bg-13-4253-2016, 2016
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This research provides spatial data on gross emissions from the land use sector for the tropical region for the period 2000–2005. This sector contributes up to 24 % of the global emissions, but there is little understanding of where the hotspots of emissions are, how uncertain they are, and what the human activities behind these emissions are. Data provided here should assist countries to identify priority areas for mitigation action and contrast the effectiveness of their current measures.
Boris Bonn, Erika von Schneidemesser, Dorota Andrich, Jörn Quedenau, Holger Gerwig, Anja Lüdecke, Jürgen Kura, Axel Pietsch, Christian Ehlers, Dieter Klemp, Claudia Kofahl, Rainer Nothard, Andreas Kerschbaumer, Wolfgang Junkermann, Rüdiger Grote, Tobias Pohl, Konradin Weber, Birgit Lode, Philipp Schönberger, Galina Churkina, Tim M. Butler, and Mark G. Lawrence
Atmos. Chem. Phys., 16, 7785–7811, https://doi.org/10.5194/acp-16-7785-2016, https://doi.org/10.5194/acp-16-7785-2016, 2016
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The distribution of air pollutants (gases and particles) have been investigated in different environments in Potsdam, Germany. Remarkable variations of the pollutants have been observed for distances of tens of meters by bicycles, vans and aircraft. Vegetated areas caused reductions depending on the pollutants, the vegetation type and dimensions. Our measurements show the pollutants to be of predominantly local origin, resulting in a huge challenge for common models to resolve.
Andrea Ghirardo, Junfei Xie, Xunhua Zheng, Yuesi Wang, Rüdiger Grote, Katja Block, Jürgen Wildt, Thomas Mentel, Astrid Kiendler-Scharr, Mattias Hallquist, Klaus Butterbach-Bahl, and Jörg-Peter Schnitzler
Atmos. Chem. Phys., 16, 2901–2920, https://doi.org/10.5194/acp-16-2901-2016, https://doi.org/10.5194/acp-16-2901-2016, 2016
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Trees can impact urban air quality. Large emissions of plant volatiles are emitted in Beijing as a stress response to the urban polluted environment, but their impacts on secondary particulate matter remain relatively low compared to those originated from anthropogenic activities. The present study highlights the importance of including stress-induced compounds when studying plant volatile emissions.
D. Fowler, C. E. Steadman, D. Stevenson, M. Coyle, R. M. Rees, U. M. Skiba, M. A. Sutton, J. N. Cape, A. J. Dore, M. Vieno, D. Simpson, S. Zaehle, B. D. Stocker, M. Rinaldi, M. C. Facchini, C. R. Flechard, E. Nemitz, M. Twigg, J. W. Erisman, K. Butterbach-Bahl, and J. N. Galloway
Atmos. Chem. Phys., 15, 13849–13893, https://doi.org/10.5194/acp-15-13849-2015, https://doi.org/10.5194/acp-15-13849-2015, 2015
Y. Fan, O. Roupsard, M. Bernoux, G. Le Maire, O. Panferov, M. M. Kotowska, and A. Knohl
Geosci. Model Dev., 8, 3785–3800, https://doi.org/10.5194/gmd-8-3785-2015, https://doi.org/10.5194/gmd-8-3785-2015, 2015
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A perennial crop model CLM-Palm is developed, including multilayer structure, phenology, and carbon and nitrogen allocation functions, for modeling an important oil palm agricultural system in the tropical regions. Simulated LAI, yield and NPP were calibrated and validated with multiple sites in Sumatra, Indonesia. The new model allows exploring the effects of tropical land use change, from natural ecosystems to monoculture plantations on carbon, water and energy cycles and regional climate.
M. Liu, M. Dannenmann, S. Lin, G. Saiz, G. Yan, Z. Yao, D. E. Pelster, H. Tao, S. Sippel, Y. Tao, Y. Zhang, X. Zheng, Q. Zuo, and K. Butterbach-Bahl
Biogeosciences, 12, 4831–4840, https://doi.org/10.5194/bg-12-4831-2015, https://doi.org/10.5194/bg-12-4831-2015, 2015
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We demonstrate for the first time that a ground cover rice production system (GCRPS) significantly increased soil organic C and total N stocks at spatially representative paired sites under varying edaphic conditions. Our results suggest that GCRPS is a stable and sustainable technique that maintains key soil functions, while increasing rice yield and expanding the cultivation into regions where it has been hampered by low seasonal temperatures and/or a lack of irrigation water.
T. Tagesson, R. Fensholt, S. Huber, S. Horion, I. Guiro, A. Ehammer, and J. Ardö
Biogeosciences, 12, 4621–4635, https://doi.org/10.5194/bg-12-4621-2015, https://doi.org/10.5194/bg-12-4621-2015, 2015
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Relationships between ecosystem properties of semi-arid savanna and reflected solar radiance between 35 and 1800nm were investigated. Normalised combinations of reflectance for the near infrared, shortwave infrared, and 600 to 700nm were strongly affected by solar and viewing angle effects. Ecosystem properties of savannas were strongly correlated with reflectance at 350-1800nm, and normalised combinations of reflectance were strong predictors of the savanna ecosystem properties.
C. Leauthaud, J. Demarty, B. Cappelaere, M. Grippa, L. Kergoat, C. Velluet, F. Guichard, E. Mougin, S. Chelbi, and B. Sultan
Proc. IAHS, 371, 195–201, https://doi.org/10.5194/piahs-371-195-2015, https://doi.org/10.5194/piahs-371-195-2015, 2015
Z. Yao, Y. Du, Y. Tao, X. Zheng, C. Liu, S. Lin, and K. Butterbach-Bahl
Biogeosciences, 11, 6221–6236, https://doi.org/10.5194/bg-11-6221-2014, https://doi.org/10.5194/bg-11-6221-2014, 2014
C. Werner, K. Reiser, M. Dannenmann, L. B. Hutley, J. Jacobeit, and K. Butterbach-Bahl
Biogeosciences, 11, 6047–6065, https://doi.org/10.5194/bg-11-6047-2014, https://doi.org/10.5194/bg-11-6047-2014, 2014
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Atmospheric loss of N from savanna soil was dominated by N2 emissions (82-99% of total N loss to atmosphere). Nitric oxide emissions significantly contributed at 50% WFPS; high temperatures and N2O emissions were negligible. Based on a simple upscale approach we estimated annual loss of N to the atmosphere at 7.5kg yr-1. N2O emission was low for most samples, but high for a small subset of cores at 75% WFPS (due to short periods where such conditions occur this has little effect on totals).
G. J. Luo, R. Kiese, B. Wolf, and K. Butterbach-Bahl
Biogeosciences, 10, 3205–3219, https://doi.org/10.5194/bg-10-3205-2013, https://doi.org/10.5194/bg-10-3205-2013, 2013
S. Metzger, W. Junkermann, M. Mauder, K. Butterbach-Bahl, B. Trancón y Widemann, F. Neidl, K. Schäfer, S. Wieneke, X. H. Zheng, H. P. Schmid, and T. Foken
Biogeosciences, 10, 2193–2217, https://doi.org/10.5194/bg-10-2193-2013, https://doi.org/10.5194/bg-10-2193-2013, 2013
D. R. Cameron, M. Van Oijen, C. Werner, K. Butterbach-Bahl, R. Grote, E. Haas, G. B. M. Heuvelink, R. Kiese, J. Kros, M. Kuhnert, A. Leip, G. J. Reinds, H. I. Reuter, M. J. Schelhaas, W. De Vries, and J. Yeluripati
Biogeosciences, 10, 1751–1773, https://doi.org/10.5194/bg-10-1751-2013, https://doi.org/10.5194/bg-10-1751-2013, 2013
N. Gharahi Ghehi, C. Werner, K. Hufkens, R. Kiese, E. Van Ranst, D. Nsabimana, G. Wallin, L. Klemedtsson, K. Butterbach-Bahl, and P. Boeckx
Biogeosciences Discuss., https://doi.org/10.5194/bgd-10-1483-2013, https://doi.org/10.5194/bgd-10-1483-2013, 2013
Revised manuscript not accepted
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Mateus Dantas de Paula, Matthew Forrest, David Warlind, João Paulo Darela Filho, Katrin Fleischer, Anja Rammig, and Thomas Hickler
Geosci. Model Dev., 18, 2249–2274, https://doi.org/10.5194/gmd-18-2249-2025, https://doi.org/10.5194/gmd-18-2249-2025, 2025
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Our study maps global nitrogen (N) and phosphorus (P) availability and how they changed from 1901 to 2018. We find that tropical regions are mostly P-limited, while temperate and boreal areas face N limitations. Over time, P limitation increased, especially in the tropics, while N limitation decreased. These shifts are key to understanding global plant growth and carbon storage, highlighting the importance of including P dynamics in ecosystem models.
Wolfgang Knorr, Matthew Williams, Tea Thum, Thomas Kaminski, Michael Voßbeck, Marko Scholze, Tristan Quaife, T. Luke Smallman, Susan C. Steele-Dunne, Mariette Vreugdenhil, Tim Green, Sönke Zaehle, Mika Aurela, Alexandre Bouvet, Emanuel Bueechi, Wouter Dorigo, Tarek S. El-Madany, Mirco Migliavacca, Marika Honkanen, Yann H. Kerr, Anna Kontu, Juha Lemmetyinen, Hannakaisa Lindqvist, Arnaud Mialon, Tuuli Miinalainen, Gaétan Pique, Amanda Ojasalo, Shaun Quegan, Peter J. Rayner, Pablo Reyes-Muñoz, Nemesio Rodríguez-Fernández, Mike Schwank, Jochem Verrelst, Songyan Zhu, Dirk Schüttemeyer, and Matthias Drusch
Geosci. Model Dev., 18, 2137–2159, https://doi.org/10.5194/gmd-18-2137-2025, https://doi.org/10.5194/gmd-18-2137-2025, 2025
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When it comes to climate change, the land surface is where the vast majority of impacts happen. The task of monitoring those impacts across the globe is formidable and must necessarily rely on satellites – at a significant cost: the measurements are only indirect and require comprehensive physical understanding. We have created a comprehensive modelling system that we offer to the research community to explore how satellite data can be better exploited to help us capture the changes that happen on our lands.
Luke Oberhagemann, Maik Billing, Werner von Bloh, Markus Drüke, Matthew Forrest, Simon P. K. Bowring, Jessica Hetzer, Jaime Ribalaygua Batalla, and Kirsten Thonicke
Geosci. Model Dev., 18, 2021–2050, https://doi.org/10.5194/gmd-18-2021-2025, https://doi.org/10.5194/gmd-18-2021-2025, 2025
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Under climate change, the conditions necessary for wildfires to form are occurring more frequently in many parts of the world. To help predict how wildfires will change in future, global fire models are being developed. We analyze and further develop one such model, SPITFIRE. Our work identifies and corrects sources of substantial bias in the model that are important to the global fire modelling field. With this analysis and these developments, we help to provide a basis for future improvements.
Trine Frisbæk Hansen, Donald Eugene Canfield, Ken Haste Andersen, and Christian Jannik Bjerrum
Geosci. Model Dev., 18, 1895–1916, https://doi.org/10.5194/gmd-18-1895-2025, https://doi.org/10.5194/gmd-18-1895-2025, 2025
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We describe and test the size-based Nutrient-Unicellular-Multicellular model, which defines unicellular plankton using a single set of parameters, on a eutrophic and oligotrophic ecosystem. The results demonstrate that both sites can be modeled with similar parameters and robust performance over a wide range of parameters. The study shows that the model is useful for non-experts and applicable for modeling ecosystems with limited data. It holds promise for evolutionary and deep-time climate models.
Ying Ye, Guy Munhoven, Peter Köhler, Martin Butzin, Judith Hauck, Özgür Gürses, and Christoph Völker
Geosci. Model Dev., 18, 977–1000, https://doi.org/10.5194/gmd-18-977-2025, https://doi.org/10.5194/gmd-18-977-2025, 2025
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Many biogeochemistry models assume all material reaching the seafloor is remineralized and returned to solution, which is sufficient for studies on short-term climate change. Under long-term climate change, the carbon storage in sediments slows down carbon cycling and influences feedbacks in the atmosphere–ocean–sediment system. This paper describes the coupling of a sediment model to an ocean biogeochemistry model and presents results under the pre-industrial climate and under CO2 perturbation.
Juliette Bernard, Elodie Salmon, Marielle Saunois, Shushi Peng, Penélope Serrano-Ortiz, Antoine Berchet, Palingamoorthy Gnanamoorthy, Joachim Jansen, and Philippe Ciais
Geosci. Model Dev., 18, 863–883, https://doi.org/10.5194/gmd-18-863-2025, https://doi.org/10.5194/gmd-18-863-2025, 2025
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Despite their importance, uncertainties remain in the evaluation of the drivers of temporal variability of methane emissions from wetlands on a global scale. Here, a simplified global model is developed, taking advantage of advances in remote-sensing data and in situ observations. The model reproduces the large spatial and temporal patterns of emissions, albeit with limitations in the tropics due to data scarcity. This model, while simple, can provide valuable insights into sensitivity analyses.
Christian Poppe Terán, Bibi S. Naz, Harry Vereecken, Roland Baatz, Rosie A. Fisher, and Harrie-Jan Hendricks Franssen
Geosci. Model Dev., 18, 287–317, https://doi.org/10.5194/gmd-18-287-2025, https://doi.org/10.5194/gmd-18-287-2025, 2025
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Carbon and water exchanges between the atmosphere and the land surface contribute to water resource availability and climate change mitigation. Land surface models, like the Community Land Model version 5 (CLM5), simulate these. This study finds that CLM5 and other data sets underestimate the magnitudes of and variability in carbon and water exchanges for the most abundant plant functional types compared to observations. It provides essential insights for further research into these processes.
Jianyong Ma, Almut Arneth, Benjamin Smith, Peter Anthoni, Xu-Ri, Peter Eliasson, David Wårlind, Martin Wittenbrink, and Stefan Olin
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-223, https://doi.org/10.5194/gmd-2024-223, 2024
Revised manuscript accepted for GMD
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Nitrous oxide (N2O) is a powerful greenhouse gas mainly released from natural and agricultural soils. This study examines how global soil N2O emissions have changed from 1961 to 2020 and identifies key factors driving these changes using an ecological model. The findings highlight croplands as the largest source, with factors like fertilizer use and climate change enhancing emissions. Rising CO2 levels, however, can partially mitigate N2O emissions through increased plant nitrogen uptake.
Katherine A. Muller, Peishi Jiang, Glenn Hammond, Tasneem Ahmadullah, Hyun-Seob Song, Ravi Kukkadapu, Nicholas Ward, Madison Bowe, Rosalie K. Chu, Qian Zhao, Vanessa A. Garayburu-Caruso, Alan Roebuck, and Xingyuan Chen
Geosci. Model Dev., 17, 8955–8968, https://doi.org/10.5194/gmd-17-8955-2024, https://doi.org/10.5194/gmd-17-8955-2024, 2024
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The new Lambda-PFLOTRAN workflow incorporates organic matter chemistry into reaction networks to simulate aerobic respiration and biogeochemistry. Lambda-PFLOTRAN is a Python-based workflow in a Jupyter notebook interface that digests raw organic matter chemistry data via Fourier transform ion cyclotron resonance mass spectrometry, develops a representative reaction network, and completes a biogeochemical simulation with the open-source, parallel-reactive-flow, and transport code PFLOTRAN.
Ling Li, Peipei Wu, Peng Zhang, Shaojian Huang, and Yanxu Zhang
Geosci. Model Dev., 17, 8683–8695, https://doi.org/10.5194/gmd-17-8683-2024, https://doi.org/10.5194/gmd-17-8683-2024, 2024
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In this study, we incorporate sea surfactants and wave-breaking processes into MITgcm-ECCOv4-Hg. The updated model shows increased fluxes in high-wind-speed and high-wave regions and vice versa, enhancing spatial heterogeneity. It shows that elemental mercury (Hg0) transfer velocity is more sensitive to wind speed. These findings may elucidate the discrepancies in previous estimations and offer insights into global Hg cycling.
Jerome Guiet, Daniele Bianchi, Kim J. N. Scherrer, Ryan F. Heneghan, and Eric D. Galbraith
Geosci. Model Dev., 17, 8421–8454, https://doi.org/10.5194/gmd-17-8421-2024, https://doi.org/10.5194/gmd-17-8421-2024, 2024
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The BiOeconomic mArine Trophic Size-spectrum (BOATSv2) model dynamically simulates global commercial fish populations and their coupling with fishing activity, as emerging from environmental and economic drivers. New features, including separate pelagic and demersal populations, iron limitation, and spatial variation of fishing costs and management, improve the accuracy of high seas fisheries. The updated model code is available to simulate both historical and future scenarios.
Jize Jiang, David S. Stevenson, and Mark A. Sutton
Geosci. Model Dev., 17, 8181–8222, https://doi.org/10.5194/gmd-17-8181-2024, https://doi.org/10.5194/gmd-17-8181-2024, 2024
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A special model called AMmonia–CLIMate (AMCLIM) has been developed to understand and calculate NH3 emissions from fertilizer use and also taking into account how the environment influences these NH3 emissions. It is estimated that about 17 % of applied N in fertilizers was lost due to NH3 emissions. Hot and dry conditions and regions with high-pH soils can expect higher NH3 emissions.
Guillaume Marie, Jina Jeong, Hervé Jactel, Gunnar Petter, Maxime Cailleret, Matthew J. McGrath, Vladislav Bastrikov, Josefine Ghattas, Bertrand Guenet, Anne Sofie Lansø, Kim Naudts, Aude Valade, Chao Yue, and Sebastiaan Luyssaert
Geosci. Model Dev., 17, 8023–8047, https://doi.org/10.5194/gmd-17-8023-2024, https://doi.org/10.5194/gmd-17-8023-2024, 2024
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This research looks at how climate change influences forests, and particularly how altered wind and insect activities could make forests emit instead of absorb carbon. We have updated a land surface model called ORCHIDEE to better examine the effect of bark beetles on forest health. Our findings suggest that sudden events, such as insect outbreaks, can dramatically affect carbon storage, offering crucial insights into tackling climate change.
Stephen Björn Wirth, Johanna Braun, Jens Heinke, Sebastian Ostberg, Susanne Rolinski, Sibyll Schaphoff, Fabian Stenzel, Werner von Bloh, Friedhelm Taube, and Christoph Müller
Geosci. Model Dev., 17, 7889–7914, https://doi.org/10.5194/gmd-17-7889-2024, https://doi.org/10.5194/gmd-17-7889-2024, 2024
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We present a new approach to modelling biological nitrogen fixation (BNF) in the Lund–Potsdam–Jena managed Land dynamic global vegetation model. While in the original approach BNF depended on actual evapotranspiration, the new approach considers soil water content and temperature, vertical root distribution, the nitrogen (N) deficit and carbon (C) costs. The new approach improved simulated BNF compared to the scientific literature and the model ability to project future C and N cycle dynamics.
Saeed Harati-Asl, Liliana Perez, and Roberto Molowny-Horas
Geosci. Model Dev., 17, 7423–7443, https://doi.org/10.5194/gmd-17-7423-2024, https://doi.org/10.5194/gmd-17-7423-2024, 2024
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Social–ecological systems are the subject of many sustainability problems. Because of the complexity of these systems, we must be careful when intervening in them; otherwise we may cause irreversible damage. Using computer models, we can gain insight about these complex systems without harming them. In this paper we describe how we connected an ecological model of forest insect infestation with a social model of cooperation and simulated an intervention measure to save a forest from infestation.
Katarína Merganičová, Ján Merganič, Laura Dobor, Roland Hollós, Zoltán Barcza, Dóra Hidy, Zuzana Sitková, Pavel Pavlenda, Hrvoje Marjanovic, Daniel Kurjak, Michal Bošel'a, Doroteja Bitunjac, Maša Zorana Ostrogović Sever, Jiří Novák, Peter Fleischer, and Tomáš Hlásny
Geosci. Model Dev., 17, 7317–7346, https://doi.org/10.5194/gmd-17-7317-2024, https://doi.org/10.5194/gmd-17-7317-2024, 2024
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We developed a multi-objective calibration approach leading to robust parameter values aiming to strike a balance between their local precision and broad applicability. Using the Biome-BGCMuSo model, we tested the calibrated parameter sets for simulating European beech forest dynamics across large environmental gradients. Leveraging data from 87 plots and five European countries, the results demonstrated reasonable local accuracy and plausible large-scale productivity responses.
Hoa T. T. Nguyen, Ute Daewel, Neil Banas, and Corinna Schrum
EGUsphere, https://doi.org/10.5194/egusphere-2024-2710, https://doi.org/10.5194/egusphere-2024-2710, 2024
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Parameterisation is key in modeling to reproduce observations well but is often done manually. This study presents a Particle Swarm Optimizer-based toolbox for marine ecosystem models, compatible with the Framework for Aquatic Biogeochemical Models, thus enhancing its reusability. Applied to the Sylt ecosystem, the toolbox effectively (1) identified multiple parameter sets that matched observations well, thus providing different insights into ecosystem dynamics, (2) optimized model complexity.
Zhengyang Lin, Ling Huang, Hanqin Tian, Anping Chen, and Xuhui Wang
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-170, https://doi.org/10.5194/gmd-2024-170, 2024
Revised manuscript accepted for GMD
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Wildfires release large amounts of greenhouse gases, contributing to global warming. We developed a new model that provides near-real-time estimates of wildfire emissions in China. Our model improves the accuracy of burned area measurements and incorporates advanced data in fuel loads and emission factors. We found that most emissions come from agricultural fires, while emissions from forests and grasslands are decreasing. This model will help reduce the environmental impacts of wildfires.
Elchin E. Jafarov, Helene Genet, Velimir V. Vesselinov, Valeria Briones, Aiza Kabeer, Andrew L. Mullen, Benjamin Maglio, Tobey Carman, Ruth Rutter, Joy Clein, Chu-Chun Chang, Dogukan Teber, Trevor Smith, Joshua M. Rady, Christina Schädel, Jennifer D. Watts, Brendan M. Rogers, and Susan M. Natali
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-158, https://doi.org/10.5194/gmd-2024-158, 2024
Revised manuscript accepted for GMD
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Thawing permafrost could greatly impact global climate. Our study improves modeling of carbon cycling in Arctic ecosystems. We developed an automated method to fine-tune a model that simulates carbon and nitrogen flows, using computer-generated data. Using computer-generated data, we tested our method and found it enhances accuracy and reduces the time needed for calibration. This work helps make climate predictions more reliable in sensitive permafrost regions.
Zavud Baghirov, Martin Jung, Markus Reichstein, Marco Körner, and Basil Kraft
EGUsphere, https://doi.org/10.5194/egusphere-2024-2044, https://doi.org/10.5194/egusphere-2024-2044, 2024
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We use an innovative approach to study the Earth's water cycle by blending advanced computer learning techniques with a traditional water cycle model. We developed a model that learns from meteorological data, with a special focus on understanding how vegetation influences water movement. Our model closely aligns with real-world observations, yet there are areas that need improvement. This study opens up new possibilities to better understand the water cycle and its interactions with vegetation.
Guohua Liu, Mirco Migliavacca, Christian Reimers, Basil Kraft, Markus Reichstein, Andrew D. Richardson, Lisa Wingate, Nicolas Delpierre, Hui Yang, and Alexander J. Winkler
Geosci. Model Dev., 17, 6683–6701, https://doi.org/10.5194/gmd-17-6683-2024, https://doi.org/10.5194/gmd-17-6683-2024, 2024
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Our study employs long short-term memory (LSTM) networks to model canopy greenness and phenology, integrating meteorological memory effects. The LSTM model outperforms traditional methods, enhancing accuracy in predicting greenness dynamics and phenological transitions across plant functional types. Highlighting the importance of multi-variate meteorological memory effects, our research pioneers unlock the secrets of vegetation phenology responses to climate change with deep learning techniques.
Thi Lan Anh Dinh, Daniel Goll, Philippe Ciais, and Ronny Lauerwald
Geosci. Model Dev., 17, 6725–6744, https://doi.org/10.5194/gmd-17-6725-2024, https://doi.org/10.5194/gmd-17-6725-2024, 2024
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The study assesses the performance of the dynamic global vegetation model (DGVM) ORCHIDEE in capturing the impact of land-use change on carbon stocks across Europe. Comparisons with observations reveal that the model accurately represents carbon fluxes and stocks. Despite the underestimations in certain land-use conversions, the model describes general trends in soil carbon response to land-use change, aligning with the site observations.
Nathaelle Bouttes, Lester Kwiatkowski, Manon Berger, Victor Brovkin, and Guy Munhoven
Geosci. Model Dev., 17, 6513–6528, https://doi.org/10.5194/gmd-17-6513-2024, https://doi.org/10.5194/gmd-17-6513-2024, 2024
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Coral reefs are crucial for biodiversity, but they also play a role in the carbon cycle on long time scales of a few thousand years. To better simulate the future and past evolution of coral reefs and their effect on the global carbon cycle, hence on atmospheric CO2 concentration, it is necessary to include coral reefs within a climate model. Here we describe the inclusion of coral reef carbonate production in a carbon–climate model and its validation in comparison to existing modern data.
Huajie Zhu, Mousong Wu, Fei Jiang, Michael Vossbeck, Thomas Kaminski, Xiuli Xing, Jun Wang, Weimin Ju, and Jing M. Chen
Geosci. Model Dev., 17, 6337–6363, https://doi.org/10.5194/gmd-17-6337-2024, https://doi.org/10.5194/gmd-17-6337-2024, 2024
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In this work, we developed the Nanjing University Carbon Assimilation System (NUCAS v1.0). Data assimilation experiments were conducted to demonstrate the robustness and investigate the feasibility and applicability of NUCAS. The assimilation of ecosystem carbonyl sulfide (COS) fluxes improved the model performance in gross primary productivity, evapotranspiration, and sensible heat, showing that COS provides constraints on parameters relevant to carbon-, water-, and energy-related processes.
Ye Liu, Huilin Huang, Sing-Chun Wang, Tao Zhang, Donghui Xu, and Yang Chen
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-151, https://doi.org/10.5194/gmd-2024-151, 2024
Revised manuscript accepted for GMD
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This study integrates machine learning with a land surface model to improve wildfire predictions in North America. Traditional models struggle with accurately simulating burned areas due to simplified processes. By combining the predictive power of machine learning with a land model, our hybrid framework better captures fire dynamics. This approach enhances our understanding of wildfire behavior and aids in developing more effective climate and fire management strategies.
Sergi Molins, Benjamin Andre, Jeffrey Johnson, Glenn Hammond, Benjamin Sulman, Konstantin Lipnikov, Marcus Day, James Beisman, Daniil Svyatsky, Hang Deng, Peter Lichtner, Carl Steefel, and David Moulton
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-108, https://doi.org/10.5194/gmd-2024-108, 2024
Revised manuscript accepted for GMD
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Developing scientific software and making sure it functions properly requires a significant effort. As we advance our understanding of natural systems, however, there is the need to develop yet more complex models and codes. In this work, we present a piece of software that facilitates this work, specifically with regard to reactive processes. Existing tried-and-true codes are made available via this new interface, freeing up resources to focus on the new aspects of the problems at hand.
Fang Li, Zhimin Zhou, Samuel Levis, Stephen Sitch, Felicity Hayes, Zhaozhong Feng, Peter B. Reich, Zhiyi Zhao, and Yanqing Zhou
Geosci. Model Dev., 17, 6173–6193, https://doi.org/10.5194/gmd-17-6173-2024, https://doi.org/10.5194/gmd-17-6173-2024, 2024
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A new scheme is developed to model the surface ozone damage to vegetation in regional and global process-based models. Based on 4210 data points from ozone experiments, it accurately reproduces statistically significant linear or nonlinear photosynthetic and stomatal responses to ozone in observations for all vegetation types. It also enables models to implicitly capture the variability in plant ozone tolerance and the shift among species within a vegetation type.
Alexander S. Brunmayr, Frank Hagedorn, Margaux Moreno Duborgel, Luisa I. Minich, and Heather D. Graven
Geosci. Model Dev., 17, 5961–5985, https://doi.org/10.5194/gmd-17-5961-2024, https://doi.org/10.5194/gmd-17-5961-2024, 2024
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A new generation of soil models promises to more accurately predict the carbon cycle in soils under climate change. However, measurements of 14C (the radioactive carbon isotope) in soils reveal that the new soil models face similar problems to the traditional models: they underestimate the residence time of carbon in soils and may therefore overestimate the net uptake of CO2 by the land ecosystem. Proposed solutions include restructuring the models and calibrating model parameters with 14C data.
Nina Raoult, Simon Beylat, James M. Salter, Frédéric Hourdin, Vladislav Bastrikov, Catherine Ottlé, and Philippe Peylin
Geosci. Model Dev., 17, 5779–5801, https://doi.org/10.5194/gmd-17-5779-2024, https://doi.org/10.5194/gmd-17-5779-2024, 2024
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We use computer models to predict how the land surface will respond to climate change. However, these complex models do not always simulate what we observe in real life, limiting their effectiveness. To improve their accuracy, we use sophisticated statistical and computational techniques. We test a technique called history matching against more common approaches. This method adapts well to these models, helping us better understand how they work and therefore how to make them more realistic.
Jorn Bruggeman, Karsten Bolding, Lars Nerger, Anna Teruzzi, Simone Spada, Jozef Skákala, and Stefano Ciavatta
Geosci. Model Dev., 17, 5619–5639, https://doi.org/10.5194/gmd-17-5619-2024, https://doi.org/10.5194/gmd-17-5619-2024, 2024
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To understand and predict the ocean’s capacity for carbon sequestration, its ability to supply food, and its response to climate change, we need the best possible estimate of its physical and biogeochemical properties. This is obtained through data assimilation which blends numerical models and observations. We present the Ensemble and Assimilation Tool (EAT), a flexible and efficient test bed that allows any scientist to explore and further develop the state of the art in data assimilation.
Dongyu Zheng, Andrew S. Merdith, Yves Goddéris, Yannick Donnadieu, Khushboo Gurung, and Benjamin J. W. Mills
Geosci. Model Dev., 17, 5413–5429, https://doi.org/10.5194/gmd-17-5413-2024, https://doi.org/10.5194/gmd-17-5413-2024, 2024
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This study uses a deep learning method to upscale the time resolution of paleoclimate simulations to 1 million years. This improved resolution allows a climate-biogeochemical model to more accurately predict climate shifts. The method may be critical in developing new fully continuous methods that are able to be applied over a moving continental surface in deep time with high resolution at reasonable computational expense.
Boris Ťupek, Aleksi Lehtonen, Alla Yurova, Rose Abramoff, Bertrand Guenet, Elisa Bruni, Samuli Launiainen, Mikko Peltoniemi, Shoji Hashimoto, Xianglin Tian, Juha Heikkinen, Kari Minkkinen, and Raisa Mäkipää
Geosci. Model Dev., 17, 5349–5367, https://doi.org/10.5194/gmd-17-5349-2024, https://doi.org/10.5194/gmd-17-5349-2024, 2024
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Updating the Yasso07 soil C model's dependency on decomposition with a hump-shaped Ricker moisture function improved modelled soil organic C (SOC) stocks in a catena of mineral and organic soils in boreal forest. The Ricker function, set to peak at a rate of 1 and calibrated against SOC and CO2 data using a Bayesian approach, showed a maximum in well-drained soils. Using SOC and CO2 data together with the moisture only from the topsoil humus was crucial for accurate model estimates.
Tatsuya Miyauchi, Makoto Saito, Hibiki M. Noda, Akihiko Ito, Tomomichi Kato, and Tsuneo Matsunaga
EGUsphere, https://doi.org/10.5194/egusphere-2024-1542, https://doi.org/10.5194/egusphere-2024-1542, 2024
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Solar-induced chlorophyll fluorescence (SIF) is an effective indicator for monitoring photosynthetic activity. This paper introduces VISIT-SIF, a biogeochemical process-based model developed to represent the global SIF observed by GOSAT. Our model simulation reproduced the global distribution and seasonal variations of GOSAT SIF. The model can be utilized to improve photosynthetic process through the combination of biogeochemical modeling and GOSAT SIF.
Jacquelyn K. Shuman, Rosie A. Fisher, Charles Koven, Ryan Knox, Lara Kueppers, and Chonggang Xu
Geosci. Model Dev., 17, 4643–4671, https://doi.org/10.5194/gmd-17-4643-2024, https://doi.org/10.5194/gmd-17-4643-2024, 2024
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We adapt a fire behavior and effects module for use in a size-structured vegetation demographic model to test how climate, fire regime, and fire-tolerance plant traits interact to determine the distribution of tropical forests and grasslands. Our model captures the connection between fire disturbance and plant fire-tolerance strategies in determining plant distribution and provides a useful tool for understanding the vulnerability of these areas under changing conditions across the tropics.
Naveenkumar Parameswaran, Everardo González, Ewa Burwicz-Galerne, Malte Braack, and Klaus Wallmann
EGUsphere, https://doi.org/10.5194/egusphere-2024-1360, https://doi.org/10.5194/egusphere-2024-1360, 2024
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Our research uses deep learning to predict organic carbon stocks in ocean sediments, crucial for understanding their role in the global carbon cycle. By analyzing over 22,000 samples and various seafloor characteristics, our model gives more accurate results than traditional methods. We estimate the top 10 cm of ocean sediments hold about 171 petagrams of carbon. This work enhances carbon stock estimates and helps plan future sampling strategies to better understand oceanic carbon burial.
Yoshiki Kanzaki, Isabella Chiaravalloti, Shuang Zhang, Noah J. Planavsky, and Christopher T. Reinhard
Geosci. Model Dev., 17, 4515–4532, https://doi.org/10.5194/gmd-17-4515-2024, https://doi.org/10.5194/gmd-17-4515-2024, 2024
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Soil pH is one of the most commonly measured agronomical and biogeochemical indices, mostly reflecting exchangeable acidity. Explicit simulation of both porewater and bulk soil pH is thus crucial to the accurate evaluation of alkalinity required to counteract soil acidification and the resulting capture of anthropogenic carbon dioxide through the enhanced weathering technique. This has been enabled by the updated reactive–transport SCEPTER code and newly developed framework to simulate soil pH.
David Sandoval, Iain Colin Prentice, and Rodolfo L. B. Nóbrega
Geosci. Model Dev., 17, 4229–4309, https://doi.org/10.5194/gmd-17-4229-2024, https://doi.org/10.5194/gmd-17-4229-2024, 2024
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Numerous estimates of water and energy balances depend on empirical equations requiring site-specific calibration, posing risks of "the right answers for the wrong reasons". We introduce novel first-principles formulations to calculate key quantities without requiring local calibration, matching predictions from complex land surface models.
Oliver Perkins, Matthew Kasoar, Apostolos Voulgarakis, Cathy Smith, Jay Mistry, and James D. A. Millington
Geosci. Model Dev., 17, 3993–4016, https://doi.org/10.5194/gmd-17-3993-2024, https://doi.org/10.5194/gmd-17-3993-2024, 2024
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Wildfire is often presented in the media as a danger to human life. Yet globally, millions of people’s livelihoods depend on using fire as a tool. So, patterns of fire emerge from interactions between humans, land use, and climate. This complexity means scientists cannot yet reliably say how fire will be impacted by climate change. So, we developed a new model that represents globally how people use and manage fire. The model reveals the extent and diversity of how humans live with and use fire.
Amos P. K. Tai, David H. Y. Yung, and Timothy Lam
Geosci. Model Dev., 17, 3733–3764, https://doi.org/10.5194/gmd-17-3733-2024, https://doi.org/10.5194/gmd-17-3733-2024, 2024
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We have developed the Terrestrial Ecosystem Model in R (TEMIR), which simulates plant carbon and pollutant uptake and predicts their response to varying atmospheric conditions. This model is designed to couple with an atmospheric chemistry model so that questions related to plant–atmosphere interactions, such as the effects of climate change, rising CO2, and ozone pollution on forest carbon uptake, can be addressed. The model has been well validated with both ground and satellite observations.
Fabian Stenzel, Johanna Braun, Jannes Breier, Karlheinz Erb, Dieter Gerten, Jens Heinke, Sarah Matej, Sebastian Ostberg, Sibyll Schaphoff, and Wolfgang Lucht
Geosci. Model Dev., 17, 3235–3258, https://doi.org/10.5194/gmd-17-3235-2024, https://doi.org/10.5194/gmd-17-3235-2024, 2024
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We provide an R package to compute two biosphere integrity metrics that can be applied to simulations of vegetation growth from the dynamic global vegetation model LPJmL. The pressure metric BioCol indicates that we humans modify and extract > 20 % of the potential preindustrial natural biomass production. The ecosystems state metric EcoRisk shows a high risk of ecosystem destabilization in many regions as a result of climate change and land, water, and fertilizer use.
Elin Ristorp Aas, Heleen A. de Wit, and Terje K. Berntsen
Geosci. Model Dev., 17, 2929–2959, https://doi.org/10.5194/gmd-17-2929-2024, https://doi.org/10.5194/gmd-17-2929-2024, 2024
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By including microbial processes in soil models, we learn how the soil system interacts with its environment and responds to climate change. We present a soil process model, MIMICS+, which is able to reproduce carbon stocks found in boreal forest soils better than a conventional land model. With the model we also find that when adding nitrogen, the relationship between soil microbes changes notably. Coupling the model to a vegetation model will allow for further study of these mechanisms.
Thomas Wutzler, Christian Reimers, Bernhard Ahrens, and Marion Schrumpf
Geosci. Model Dev., 17, 2705–2725, https://doi.org/10.5194/gmd-17-2705-2024, https://doi.org/10.5194/gmd-17-2705-2024, 2024
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Soil microbes provide a strong link for elemental fluxes in the earth system. The SESAM model applies an optimality assumption to model those linkages and their adaptation. We found that a previous heuristic description was a special case of a newly developed more rigorous description. The finding of new behaviour at low microbial biomass led us to formulate the constrained enzyme hypothesis. We now can better describe how microbially mediated linkages of elemental fluxes adapt across decades.
Salvatore R. Curasi, Joe R. Melton, Elyn R. Humphreys, Txomin Hermosilla, and Michael A. Wulder
Geosci. Model Dev., 17, 2683–2704, https://doi.org/10.5194/gmd-17-2683-2024, https://doi.org/10.5194/gmd-17-2683-2024, 2024
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Canadian forests are responding to fire, harvest, and climate change. Models need to quantify these processes and their carbon and energy cycling impacts. We develop a scheme that, based on satellite records, represents fire, harvest, and the sparsely vegetated areas that these processes generate. We evaluate model performance and demonstrate the impacts of disturbance on carbon and energy cycling. This work has implications for land surface modeling and assessing Canada’s terrestrial C cycle.
Yannek Käber, Florian Hartig, and Harald Bugmann
Geosci. Model Dev., 17, 2727–2753, https://doi.org/10.5194/gmd-17-2727-2024, https://doi.org/10.5194/gmd-17-2727-2024, 2024
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Many forest models include detailed mechanisms of forest growth and mortality, but regeneration is often simplified. Testing and improving forest regeneration models is challenging. We address this issue by exploring how forest inventories from unmanaged European forests can be used to improve such models. We find that competition for light among trees is captured by the model, unknown model components can be informed by forest inventory data, and climatic effects are challenging to capture.
Jalisha T. Kallingal, Johan Lindström, Paul A. Miller, Janne Rinne, Maarit Raivonen, and Marko Scholze
Geosci. Model Dev., 17, 2299–2324, https://doi.org/10.5194/gmd-17-2299-2024, https://doi.org/10.5194/gmd-17-2299-2024, 2024
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By unlocking the mysteries of CH4 emissions from wetlands, our work improved the accuracy of the LPJ-GUESS vegetation model using Bayesian statistics. Via assimilation of long-term real data from a wetland, we significantly enhanced CH4 emission predictions. This advancement helps us better understand wetland contributions to atmospheric CH4, which are crucial for addressing climate change. Our method offers a promising tool for refining global climate models and guiding conservation efforts
Benjamin Post, Esteban Acevedo-Trejos, Andrew D. Barton, and Agostino Merico
Geosci. Model Dev., 17, 1175–1195, https://doi.org/10.5194/gmd-17-1175-2024, https://doi.org/10.5194/gmd-17-1175-2024, 2024
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Creating computational models of how phytoplankton grows in the ocean is a technical challenge. We developed a new tool set (Xarray-simlab-ODE) for building such models using the programming language Python. We demonstrate the tool set in a library of plankton models (Phydra). Our goal was to allow scientists to develop models quickly, while also allowing the model structures to be changed easily. This allows us to test many different structures of our models to find the most appropriate one.
Taeken Wijmer, Ahmad Al Bitar, Ludovic Arnaud, Remy Fieuzal, and Eric Ceschia
Geosci. Model Dev., 17, 997–1021, https://doi.org/10.5194/gmd-17-997-2024, https://doi.org/10.5194/gmd-17-997-2024, 2024
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Quantification of carbon fluxes of crops is an essential building block for the construction of a monitoring, reporting, and verification approach. We developed an end-to-end platform (AgriCarbon-EO) that assimilates, through a Bayesian approach, high-resolution (10 m) optical remote sensing data into radiative transfer and crop modelling at regional scale (100 x 100 km). Large-scale estimates of carbon flux are validated against in situ flux towers and yield maps and analysed at regional scale.
Moritz Laub, Sergey Blagodatsky, Marijn Van de Broek, Samuel Schlichenmaier, Benjapon Kunlanit, Johan Six, Patma Vityakon, and Georg Cadisch
Geosci. Model Dev., 17, 931–956, https://doi.org/10.5194/gmd-17-931-2024, https://doi.org/10.5194/gmd-17-931-2024, 2024
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To manage soil organic matter (SOM) sustainably, we need a better understanding of the role that soil microbes play in aggregate protection. Here, we propose the SAMM model, which connects soil aggregate formation to microbial growth. We tested it against data from a tropical long-term experiment and show that SAMM effectively represents the microbial growth, SOM, and aggregate dynamics and that it can be used to explore the importance of aggregate formation in SOM stabilization.
Jianhong Lin, Daniel Berveiller, Christophe François, Heikki Hänninen, Alexandre Morfin, Gaëlle Vincent, Rui Zhang, Cyrille Rathgeber, and Nicolas Delpierre
Geosci. Model Dev., 17, 865–879, https://doi.org/10.5194/gmd-17-865-2024, https://doi.org/10.5194/gmd-17-865-2024, 2024
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Currently, the high variability of budburst between individual trees is overlooked. The consequences of this neglect when projecting the dynamics and functioning of tree communities are unknown. Here we develop the first process-oriented model to describe the difference in budburst dates between individual trees in plant populations. Beyond budburst, the model framework provides a basis for studying the dynamics of phenological traits under climate change, from the individual to the community.
Skyler Kern, Mary E. McGuinn, Katherine M. Smith, Nadia Pinardi, Kyle E. Niemeyer, Nicole S. Lovenduski, and Peter E. Hamlington
Geosci. Model Dev., 17, 621–649, https://doi.org/10.5194/gmd-17-621-2024, https://doi.org/10.5194/gmd-17-621-2024, 2024
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Computational models are used to simulate the behavior of marine ecosystems. The models often have unknown parameters that need to be calibrated to accurately represent observational data. Here, we propose a novel approach to simultaneously determine a large set of parameters for a one-dimensional model of a marine ecosystem in the surface ocean at two contrasting sites. By utilizing global and local optimization techniques, we estimate many parameters in a computationally efficient manner.
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Short summary
West African Sahelian and Sudanian ecosystems are important regions for global carbon exchange, and they provide valuable food and fodder resources. Therefore, we simulated net ecosystem exchange and aboveground biomass of typical ecosystems in this region with an improved process-based biogeochemical model, LandscapeDNDC. Carbon stocks and exchange rates were particularly correlated with the abundance of trees. Grass and crop yields increased under humid climatic conditions.
West African Sahelian and Sudanian ecosystems are important regions for global carbon exchange,...
