Articles | Volume 9, issue 6
https://doi.org/10.5194/gmd-9-2271-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/gmd-9-2271-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Model description paper
| 
01 Jul 2016
Model description paper |
| 01 Jul 2016
FABM-PCLake – linking aquatic ecology with hydrodynamics
Aarhus University, Department of Bioscience, Vejlsøvej 25, 8600
Silkeborg, Denmark
University of Southern Denmark, Department of
Biology, Campusvej 55, 5230 Odense M, Denmark
Karsten Bolding
Aarhus University, Department of Bioscience, Vejlsøvej 25, 8600
Silkeborg, Denmark
Bolding &
Bruggeman ApS, Strandgyden 25, 5466 Asperup, Denmark
Jorn Bruggeman
Bolding &
Bruggeman ApS, Strandgyden 25, 5466 Asperup, Denmark
Plymouth
Marine Laboratory, Prospect Place, the Hoe, Plymouth PL1 3DH, UK
Erik Jeppesen
Aarhus University, Department of Bioscience, Vejlsøvej 25, 8600
Silkeborg, Denmark
Sino-Danish Center for Education and Research, University of
Chinese Academy of Sciences, Beijing, China
Morgens R. Flindt
University of Southern Denmark, Department of
Biology, Campusvej 55, 5230 Odense M, Denmark
Luuk van Gerven
Netherlands Institute
of Ecology, Department of Aquatic Ecology, 6700 AB Wageningen, the
Netherlands
Wageningen University, Department of Aquatic Ecology
and Water Quality Management, 6700 AA, the Netherlands
Jan H. Janse
Netherlands Institute
of Ecology, Department of Aquatic Ecology, 6700 AB Wageningen, the
Netherlands
PBL
Netherlands Environmental Assessment Agency, Dept. of Nature and Rural Areas,
3720 AH Bilthoven, the Netherlands
Annette B. G. Janssen
Netherlands Institute
of Ecology, Department of Aquatic Ecology, 6700 AB Wageningen, the
Netherlands
Wageningen University, Department of Aquatic Ecology
and Water Quality Management, 6700 AA, the Netherlands
Jan J. Kuiper
Netherlands Institute
of Ecology, Department of Aquatic Ecology, 6700 AB Wageningen, the
Netherlands
Wageningen University, Department of Aquatic Ecology
and Water Quality Management, 6700 AA, the Netherlands
Wolf M. Mooij
Netherlands Institute
of Ecology, Department of Aquatic Ecology, 6700 AB Wageningen, the
Netherlands
Wageningen University, Department of Aquatic Ecology
and Water Quality Management, 6700 AA, the Netherlands
Dennis Trolle
Aarhus University, Department of Bioscience, Vejlsøvej 25, 8600
Silkeborg, Denmark
Sino-Danish Center for Education and Research, University of
Chinese Academy of Sciences, Beijing, China
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- Predicting ecosystem state changes in shallow lakes using an aquatic ecosystem model: Lake Hinge, Denmark, an example T. Andersen et al. 10.1002/eap.2160
- A perspective on water quality in connected systems: modelling feedback between upstream and downstream transport and local ecological processes S. Teurlincx et al. 10.1016/j.cosust.2019.07.004
- A 1-Dimensional Sympagic–Pelagic–Benthic Transport Model (SPBM): Coupled Simulation of Ice, Water Column, and Sediment Biogeochemistry, Suitable for Arctic Applications . Yakubov et al. 10.3390/w11081582
- Research progress on ecological models in the field of water eutrophication: CiteSpace analysis based on data from the ISI web of science database W. Hu et al. 10.1016/j.ecolmodel.2019.108779
- An open source QGIS-based workflow for model application and experimentation with aquatic ecosystems A. Nielsen et al. 10.1016/j.envsoft.2017.06.032
- Relative Performance of 1-D Versus 3-D Hydrodynamic, Water-Quality Models for Predicting Water Temperature and Oxygen in a Shallow, Eutrophic, Managed Reservoir X. Man et al. 10.3390/w13010088
- Determining the Optimal Biomass of Macrophytes during the Ecological Restoration Process of Eutrophic Shallow Lakes W. Hu et al. 10.3390/w13213142
- PCLake+: A process-based ecological model to assess the trophic state of stratified and non-stratified freshwater lakes worldwide A. Janssen et al. 10.1016/j.ecolmodel.2019.01.006
- Variable withdrawal elevations as a management tool to counter the effects of climate warming in Germany’s largest drinking water reservoir C. Mi et al. 10.1186/s12302-019-0202-4
- Preface: Restoration of eutrophic lakes: current practices and future challenges T. Jilbert et al. 10.1007/s10750-020-04457-x
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- Perspectives and challenges of applying the water-food-energy nexus approach to lake eutrophication modelling Y. Tong et al. 10.1016/j.wasec.2021.100095
- Water quality improvement measures at the Yagang cross-section in the Pearl River Delta based on the calculation of excessive pollutant fluxes M. Pang et al. 10.2166/ws.2020.345
- A QGIS plugin to tailor SWAT watershed delineations to lake and reservoir waterbodies E. Molina-Navarro et al. 10.1016/j.envsoft.2018.07.003
- Hitting the sweet spot of complexity: Reasons why the development of new custom-tailored models is still warranted and should be encouraged in aquatic sciences G. López Moreira M. et al. 10.4081/jlimnol.2021.2035
- Modeling water quality in the Anthropocene: directions for the next-generation aquatic ecosystem models W. Mooij et al. 10.1016/j.cosust.2018.10.012
- The impact of climate change on a Mediterranean shallow lake: insights based on catchment and lake modelling J. Coppens et al. 10.1007/s10113-020-01641-6
- A GIS-based framework for quantifying potential shadow casts on lakes applied to a Danish lake experimental facility A. Nielsen et al. 10.1016/j.jag.2018.08.022
- ‘Literature review on the analysis of climate change risks in the environmental impact assessment of dams’ A. Loza & T. Fidélis 10.1080/14615517.2021.1893928
- Integrated modelling and management of water resources: the ecosystem perspective on the nexus approach S. Hülsmann et al. 10.1016/j.cosust.2019.07.003
Saved (preprint)
Latest update: 07 Jun 2023
Short summary
We present a redesign and further development of a complex and well-known aquatic ecosystem model (PCLake) into the Framework for Aquatic Biogeochemical Models (FABM). So PCLake can run in different hydrodynamic environments, ranging from 0-D to 3-D. We introduce the methods and technical details about how the model was re-designed into a modular structure and the new features of PCLake enabled by FABM. We further present a benchmark test case to verify the new model implementation.
We present a redesign and further development of a complex and well-known aquatic ecosystem...
