Articles | Volume 9, issue 6
https://doi.org/10.5194/gmd-9-2271-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/gmd-9-2271-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Model description paper
| 
01 Jul 2016
Model description paper |
| 01 Jul 2016
FABM-PCLake – linking aquatic ecology with hydrodynamics
Aarhus University, Department of Bioscience, Vejlsøvej 25, 8600
Silkeborg, Denmark
University of Southern Denmark, Department of
Biology, Campusvej 55, 5230 Odense M, Denmark
Karsten Bolding
Aarhus University, Department of Bioscience, Vejlsøvej 25, 8600
Silkeborg, Denmark
Bolding &
Bruggeman ApS, Strandgyden 25, 5466 Asperup, Denmark
Jorn Bruggeman
Bolding &
Bruggeman ApS, Strandgyden 25, 5466 Asperup, Denmark
Plymouth
Marine Laboratory, Prospect Place, the Hoe, Plymouth PL1 3DH, UK
Erik Jeppesen
Aarhus University, Department of Bioscience, Vejlsøvej 25, 8600
Silkeborg, Denmark
Sino-Danish Center for Education and Research, University of
Chinese Academy of Sciences, Beijing, China
Morgens R. Flindt
University of Southern Denmark, Department of
Biology, Campusvej 55, 5230 Odense M, Denmark
Luuk van Gerven
Netherlands Institute
of Ecology, Department of Aquatic Ecology, 6700 AB Wageningen, the
Netherlands
Wageningen University, Department of Aquatic Ecology
and Water Quality Management, 6700 AA, the Netherlands
Jan H. Janse
Netherlands Institute
of Ecology, Department of Aquatic Ecology, 6700 AB Wageningen, the
Netherlands
PBL
Netherlands Environmental Assessment Agency, Dept. of Nature and Rural Areas,
3720 AH Bilthoven, the Netherlands
Annette B. G. Janssen
Netherlands Institute
of Ecology, Department of Aquatic Ecology, 6700 AB Wageningen, the
Netherlands
Wageningen University, Department of Aquatic Ecology
and Water Quality Management, 6700 AA, the Netherlands
Jan J. Kuiper
Netherlands Institute
of Ecology, Department of Aquatic Ecology, 6700 AB Wageningen, the
Netherlands
Wageningen University, Department of Aquatic Ecology
and Water Quality Management, 6700 AA, the Netherlands
Wolf M. Mooij
Netherlands Institute
of Ecology, Department of Aquatic Ecology, 6700 AB Wageningen, the
Netherlands
Wageningen University, Department of Aquatic Ecology
and Water Quality Management, 6700 AA, the Netherlands
Dennis Trolle
Aarhus University, Department of Bioscience, Vejlsøvej 25, 8600
Silkeborg, Denmark
Sino-Danish Center for Education and Research, University of
Chinese Academy of Sciences, Beijing, China
Data sets
The Framework for Aquatic Biogeochemical Models (FABM): a Fortran 2003 programming framework for biogeochemical models of marine and freshwater systems J. Bruggeman and K. Bolding http://fabm.net
Short summary
We present a redesign and further development of a complex and well-known aquatic ecosystem model (PCLake) into the Framework for Aquatic Biogeochemical Models (FABM). So PCLake can run in different hydrodynamic environments, ranging from 0-D to 3-D. We introduce the methods and technical details about how the model was re-designed into a modular structure and the new features of PCLake enabled by FABM. We further present a benchmark test case to verify the new model implementation.
We present a redesign and further development of a complex and well-known aquatic ecosystem...
