The unicellular NUM v.0.91: a trait-based plankton model evaluated in two contrasting biogeographic provinces
Data sets
Measurements from CalCOFI cruises in the California Current System, including log of station information, weather, sea conditions as well as physical, chemical and biological measurements including including temperature, salinity, oxygen, density, sigma theta, phosphate, silicate, nitrite, nitrate, ammonia, chlorophyll a, integrated chlorophyll a, primary productivity, and integrated primary production, 1949--January 2020, ver 5 https://doi.org/10.6073/pasta/7f8e5d24e9b27ae695295a8ddc0809d1
Size group (pico, nano, micro) and group total carbon estimates from cell counts via epifluorescent microscopy (EPI) of heterotrophic and autotrophic plankton from CCE LTER process cruises in the California Current region, 2006--2016, ver 4 https://doi.org/10.6073/pasta/430bc600ff16ec4853fc4d594465e1fe
Temporal dynamics of phytoplankton and heterotrophic protists at station ALOHA (https://hahana.soest.hawaii.edu/hot/hot-dogs/bextraction.html) https://doi.org/10.1016/j.dsr2.2013.01.007
World Ocean Atlas 2018, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate and nitrate + nitrite, silicate) https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/
Index of /data/oceans/woa/WOA18/DATA/nitrate/netcdf/all/1.00 https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/nitrate/netcdf/all/1.00/
Model code and software
Model code for The unicellular NUM v.0.91: A trait-based plankton model evaluated in two contrasting biogeographic provinces https://doi.org/10.5281/zenodo.10844336
Version 2.0 of the Transport Matrix Method software https://github.com/samarkhatiwala/tmm/releases/tag/v2.0
Release v0.91 Kenhasteandersen/NUMmodel https://github.com/Kenhasteandersen/NUMmodel/releases/tag/v0.91