Articles | Volume 15, issue 9
https://doi.org/10.5194/gmd-15-3879-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-15-3879-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Development and technical paper
| 
13 May 2022
Development and technical paper |
| 13 May 2022
| 13 May 2022
On numerical broadening of particle-size spectra: a condensational growth study using PyMPDATA 1.0
Michael A. Olesik
CORRESPONDING AUTHOR
Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, Kraków,
Poland
Jakub Banaśkiewicz
Faculty of Mathematics and Computer Science, Jagiellonian University, Kraków, Poland
Piotr Bartman
Faculty of Mathematics and Computer Science, Jagiellonian University, Kraków, Poland
Manuel Baumgartner
Zentrum für Datenverarbeitung, Johannes Gutenberg University Mainz, Mainz, Germany
Institute for Atmospheric Physics, Johannes Gutenberg University Mainz, Mainz, Germany
Simon Unterstrasser
Institute of Atmospheric Physics, German Aerospace Center (DLR), Oberpfaffenhofen, Germany
Sylwester Arabas
CORRESPONDING AUTHOR
Department of Atmospheric Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, USA
Faculty of Mathematics and Computer Science, Jagiellonian University, Kraków, Poland
Related authors
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Andreas Bier, Simon Unterstrasser, Josef Zink, Dennis Hillenbrand, Tina Jurkat-Witschas, and Annemarie Lottermoser
Atmos. Chem. Phys., 24, 2319–2344, https://doi.org/10.5194/acp-24-2319-2024, https://doi.org/10.5194/acp-24-2319-2024, 2024
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Using hydrogen as aviation fuel affects contrails' climate impact. We study contrail formation behind aircraft with H2 combustion. Due to the absence of soot emissions, contrail ice crystals are assumed to form only on ambient particles mixed into the plume. The ice crystal number, which strongly varies with temperature and aerosol number density, is decreased by more than 80 %–90 % compared to kerosene contrails. However H2 contrails can form at lower altitudes due to higher H2O emissions.
Emily de Jong, John Ben Mackay, Oleksii Bulenok, Anna Jaruga, and Sylwester Arabas
Geosci. Model Dev., 16, 4193–4211, https://doi.org/10.5194/gmd-16-4193-2023, https://doi.org/10.5194/gmd-16-4193-2023, 2023
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In clouds, collisional breakup occurs when two colliding droplets splinter into new, smaller fragments. Particle-based modeling approaches often do not represent breakup because of the computational demands of creating new droplets. We present a particle-based breakup method that preserves the computational efficiency of these methods. In a series of simple demonstrations, we show that this representation alters cloud processes in reasonable and expected ways.
Peter Spichtinger, Patrik Marschalik, and Manuel Baumgartner
Atmos. Chem. Phys., 23, 2035–2060, https://doi.org/10.5194/acp-23-2035-2023, https://doi.org/10.5194/acp-23-2035-2023, 2023
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We investigate the impact of the homogeneous nucleation rate on nucleation events in cirrus. As long as the slope of the rate is represented sufficiently well, the resulting ice crystal number concentrations are not crucially affected. Even a change in the prefactor over orders of magnitude does not change the results. However, the maximum supersaturation during nucleation events shows strong changes. This quantity should be used for diagnostics instead of the popular nucleation threshold.
Andreas Bier, Simon Unterstrasser, and Xavier Vancassel
Atmos. Chem. Phys., 22, 823–845, https://doi.org/10.5194/acp-22-823-2022, https://doi.org/10.5194/acp-22-823-2022, 2022
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We investigate contrail formation in an aircraft plume with a particle-based multi-trajectory 0D model. Due to the high plume heterogeneity, contrail ice crystals form first near the plume edge and then in the plume centre. The number of ice crystals varies strongly with ambient conditions and soot properties near the contrail formation threshold. Our results imply that the multi-trajectory approach does not necessarily lead to improved scientific results compared to a single mean trajectory.
Manuel Baumgartner, Christian Rolf, Jens-Uwe Grooß, Julia Schneider, Tobias Schorr, Ottmar Möhler, Peter Spichtinger, and Martina Krämer
Atmos. Chem. Phys., 22, 65–91, https://doi.org/10.5194/acp-22-65-2022, https://doi.org/10.5194/acp-22-65-2022, 2022
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An important mechanism for the appearance of ice particles in the upper troposphere at low temperatures is homogeneous nucleation. This process is commonly described by the
Koop line, predicting the humidity at freezing. However, laboratory measurements suggest that the freezing humidities are above the Koop line, motivating the present study to investigate the influence of different physical parameterizations on the homogeneous freezing with the help of a detailed numerical model.
Julia Schneider, Kristina Höhler, Robert Wagner, Harald Saathoff, Martin Schnaiter, Tobias Schorr, Isabelle Steinke, Stefan Benz, Manuel Baumgartner, Christian Rolf, Martina Krämer, Thomas Leisner, and Ottmar Möhler
Atmos. Chem. Phys., 21, 14403–14425, https://doi.org/10.5194/acp-21-14403-2021, https://doi.org/10.5194/acp-21-14403-2021, 2021
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Homogeneous freezing is a relevant mechanism for the formation of cirrus clouds in the upper troposphere. Based on an extensive set of homogeneous freezing experiments at the AIDA chamber with aqueous sulfuric acid aerosol, we provide a new fit line for homogeneous freezing onset conditions of sulfuric acid aerosol focusing on cirrus temperatures. In the atmosphere, homogeneous freezing thresholds have important implications on the cirrus cloud occurrence and related cloud radiative effects.
Ralf Weigel, Christoph Mahnke, Manuel Baumgartner, Martina Krämer, Peter Spichtinger, Nicole Spelten, Armin Afchine, Christian Rolf, Silvia Viciani, Francesco D'Amato, Holger Tost, and Stephan Borrmann
Atmos. Chem. Phys., 21, 13455–13481, https://doi.org/10.5194/acp-21-13455-2021, https://doi.org/10.5194/acp-21-13455-2021, 2021
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In July and August 2017, the StratoClim mission took place in Nepal with eight flights of the M-55 Geophysica at up to 20 km in the Asian monsoon anticyclone. New particle formation (NPF) next to cloud ice was detected in situ by abundant nucleation-mode aerosols (> 6 nm) along with ice particles (> 3 µm). NPF was observed mainly below the tropopause, down to 15 % being non-volatile residues. Observed intra-cloud NPF indicates its importance for the composition in the tropical tropopause layer.
Ralf Weigel, Christoph Mahnke, Manuel Baumgartner, Antonis Dragoneas, Bärbel Vogel, Felix Ploeger, Silvia Viciani, Francesco D'Amato, Silvia Bucci, Bernard Legras, Beiping Luo, and Stephan Borrmann
Atmos. Chem. Phys., 21, 11689–11722, https://doi.org/10.5194/acp-21-11689-2021, https://doi.org/10.5194/acp-21-11689-2021, 2021
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In July and August 2017, eight StratoClim mission flights of the Geophysica reached up to 20 km in the Asian monsoon anticyclone. New particle formation (NPF) was identified in situ by abundant nucleation-mode aerosols (6–15 nm in diameter) with mixing ratios of up to 50 000 mg−1. NPF occurred most frequently at 12–16 km with fractions of non-volatile residues of down to 15 %. Abundance and productivity of observed NPF indicate its ability to promote the Asian tropopause aerosol layer.
Manuel Baumgartner, Ralf Weigel, Allan H. Harvey, Felix Plöger, Ulrich Achatz, and Peter Spichtinger
Atmos. Chem. Phys., 20, 15585–15616, https://doi.org/10.5194/acp-20-15585-2020, https://doi.org/10.5194/acp-20-15585-2020, 2020
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The potential temperature is routinely used in atmospheric science. We review its derivation and suggest a new potential temperature, based on a temperature-dependent parameterization of the dry air's specific heat capacity. Moreover, we compare the new potential temperature to the common one and discuss the differences which become more important at higher altitudes. Finally, we indicate some consequences of using the new potential temperature in typical applications.
Simon Unterstrasser, Fabian Hoffmann, and Marion Lerch
Geosci. Model Dev., 13, 5119–5145, https://doi.org/10.5194/gmd-13-5119-2020, https://doi.org/10.5194/gmd-13-5119-2020, 2020
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Particle-based cloud models use simulation particles for the representation of cloud particles like droplets or ice crystals. The collision and merging of cloud particles (i.e. collisional growth a.k.a. collection in the case of cloud droplets and aggregation in the case of ice crystals) was found to be a numerically challenging process in such models. The study presents verification exercises in a 1D column model, where sedimentation and collisional growth are the only active processes.
Manuel Baumgartner, Max Sagebaum, Nicolas R. Gauger, Peter Spichtinger, and André Brinkmann
Geosci. Model Dev., 12, 5197–5212, https://doi.org/10.5194/gmd-12-5197-2019, https://doi.org/10.5194/gmd-12-5197-2019, 2019
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Numerical models in atmospheric sciences need to include physical processes through parameterizations, which are not explicitly resolved, e.g., the formation of clouds. As a consequence, the parameterizations contain uncertain parameters. We suggest using the technique of algorithmic differentiation (AD) to identify the most uncertain parameters within parameterizations. In this study, we illustrate AD by analyzing a scheme for liquid clouds incorporated into a parcel model framework.
Simon Gruber, Simon Unterstrasser, Jan Bechtold, Heike Vogel, Martin Jung, Henry Pak, and Bernhard Vogel
Atmos. Chem. Phys., 18, 6393–6411, https://doi.org/10.5194/acp-18-6393-2018, https://doi.org/10.5194/acp-18-6393-2018, 2018
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A numerical model also used for operational weather forecast was applied to investigate the impact of contrails and contrail cirrus on the radiative fluxes at the earth's surface. Accounting for contrails produced by aircraft enables the model to simulate high clouds that are otherwise missing. In a case study, we find that the effect of these extra clouds is to reduce the incoming shortwave radiation at the surface as well as the production of photovoltaic power by up to 10 %.
Manuel Baumgartner and Peter Spichtinger
Atmos. Chem. Phys., 18, 2525–2546, https://doi.org/10.5194/acp-18-2525-2018, https://doi.org/10.5194/acp-18-2525-2018, 2018
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Ice crystals are surrounded by liquid cloud droplets in mixed-phase clouds. The coexistence of ice and water is thermodynamically not stable and the particles will influence their respective growth by condensation. This effect is known as the Wegener–Bergeron–Findeisen process. In current models, the local interactions of the particles are neglected and they can only interact indirectly. This work proposes an approach to include local interactions and discusses some implications.
Sylwester Arabas and Shin-ichiro Shima
Nonlin. Processes Geophys., 24, 535–542, https://doi.org/10.5194/npg-24-535-2017, https://doi.org/10.5194/npg-24-535-2017, 2017
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The paper bridges cloud/aerosol modelling with bifurcation analysis. It identifies two nonlinear peculiarities in the differential equations describing formation of atmospheric clouds through vapour condensation on a population of aerosol particles. A key finding of the paper is an analytic estimate for the timescale of the process. The study emerged from discussions on the causes of hysteretic behaviour of the system that we observed in the results of numerical simulations.
Simon Unterstrasser, Fabian Hoffmann, and Marion Lerch
Geosci. Model Dev., 10, 1521–1548, https://doi.org/10.5194/gmd-10-1521-2017, https://doi.org/10.5194/gmd-10-1521-2017, 2017
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In the last decade, several Lagrangian microphysical models (LCMs) have been developed which use a large number of (computational) particles to represent a cloud. In particular, the collision process leading to coalescence of cloud droplets or aggregation of ice crystals is implemented differently in various models. Three existing implementations are reviewed and extended, and their performance is evaluated by a comparison with well established analytical and bin model solutions.
Simon Unterstrasser
Atmos. Chem. Phys., 16, 2059–2082, https://doi.org/10.5194/acp-16-2059-2016, https://doi.org/10.5194/acp-16-2059-2016, 2016
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A large comprehensive data set of 3-D large eddy simulation (LES) of young contrails has been analysed.
Parametrisations of the most important properties of young contrails, namely the ice crystal number and geometric depth, are provided taking into account the effect of many environmental and aircraft parameters.
The parametrisation is suited to be incorporated in larger-scale models like GCMs.
S. Arabas, A. Jaruga, H. Pawlowska, and W. W. Grabowski
Geosci. Model Dev., 8, 1677–1707, https://doi.org/10.5194/gmd-8-1677-2015, https://doi.org/10.5194/gmd-8-1677-2015, 2015
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This paper introduces a free and open-source C++ library of algorithms for representing cloud microphysics in numerical models. In the current release, the library covers three warm-rain schemes: the single- and double-moment bulk schemes, and the particle-based scheme with Monte Carlo coalescence. The three schemes are intended for modelling frameworks of different dimensionalities and complexities ranging from parcel models to multi-dimensional cloud-resolving (e.g. large-eddy) simulations.
A. Jaruga, S. Arabas, D. Jarecka, H. Pawlowska, P. K. Smolarkiewicz, and M. Waruszewski
Geosci. Model Dev., 8, 1005–1032, https://doi.org/10.5194/gmd-8-1005-2015, https://doi.org/10.5194/gmd-8-1005-2015, 2015
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This paper accompanies the first release of libmpdata++, a C++ library implementing the multidimensional positive-definite advection transport algorithm (MPDATA) on a regular structured grid. The library offers basic numerical solvers for systems of generalised transport equations. All solvers offer parallelisation through domain decomposition using shared-memory parallelisation. The paper describes the library programming interface, and serves as a user guide.
S. Unterstrasser and I. Sölch
Geosci. Model Dev., 7, 695–709, https://doi.org/10.5194/gmd-7-695-2014, https://doi.org/10.5194/gmd-7-695-2014, 2014
S. Unterstrasser, R. Paoli, I. Sölch, C. Kühnlein, and T. Gerz
Atmos. Chem. Phys., 14, 2713–2733, https://doi.org/10.5194/acp-14-2713-2014, https://doi.org/10.5194/acp-14-2713-2014, 2014
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Geosci. Model Dev., 17, 1387–1407, https://doi.org/10.5194/gmd-17-1387-2024, https://doi.org/10.5194/gmd-17-1387-2024, 2024
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Sophisticated numerical models of the Earth's atmosphere include representations of many physical and chemical processes. In numerical simulations, these processes need to be calculated in a certain sequence. This study reveals the weaknesses of the sequence of calculations used for aerosol processes in a global atmosphere model. A revision of the sequence is proposed and its impacts on the simulated global aerosol climatology are evaluated.
Christopher J. Vogl, Hui Wan, Carol S. Woodward, and Quan M. Bui
Geosci. Model Dev., 17, 1409–1428, https://doi.org/10.5194/gmd-17-1409-2024, https://doi.org/10.5194/gmd-17-1409-2024, 2024
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Generally speaking, accurate climate simulation requires an accurate evolution of the underlying mathematical equations on large computers. The equations are typically formulated and evolved in process groups. Process coupling refers to how the evolution of each group is combined with that of other groups to evolve the full set of equations for the whole atmosphere. This work presents a mathematical framework to evaluate methods without the need to first implement the methods.
Tom Keel, Chris Brierley, and Tamsin Edwards
Geosci. Model Dev., 17, 1229–1247, https://doi.org/10.5194/gmd-17-1229-2024, https://doi.org/10.5194/gmd-17-1229-2024, 2024
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Jet streams are an important control on surface weather as their speed and shape can modify the properties of weather systems. Establishing trends in the operation of jet streams may provide some indication of the future of weather in a warming world. Despite this, it has not been easy to establish trends, as many methods have been used to characterise them in data. We introduce a tool containing various implementations of jet stream statistics and algorithms that works in a standardised manner.
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Geosci. Model Dev., 17, 881–898, https://doi.org/10.5194/gmd-17-881-2024, https://doi.org/10.5194/gmd-17-881-2024, 2024
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Geosci. Model Dev., 17, 301–320, https://doi.org/10.5194/gmd-17-301-2024, https://doi.org/10.5194/gmd-17-301-2024, 2024
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Geosci. Model Dev., 17, 335–346, https://doi.org/10.5194/gmd-17-335-2024, https://doi.org/10.5194/gmd-17-335-2024, 2024
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Geosci. Model Dev., 17, 71–90, https://doi.org/10.5194/gmd-17-71-2024, https://doi.org/10.5194/gmd-17-71-2024, 2024
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Denise Degen, Daniel Caviedes Voullième, Susanne Buiter, Harrie-Jan Hendricks Franssen, Harry Vereecken, Ana González-Nicolás, and Florian Wellmann
Geosci. Model Dev., 16, 7375–7409, https://doi.org/10.5194/gmd-16-7375-2023, https://doi.org/10.5194/gmd-16-7375-2023, 2023
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In geosciences, we often use simulations based on physical laws. These simulations can be computationally expensive, which is a problem if simulations must be performed many times (e.g., to add error bounds). We show how a novel machine learning method helps to reduce simulation time. In comparison to other approaches, which typically only look at the output of a simulation, the method considers physical laws in the simulation itself. The method provides reliable results faster than standard.
Carlos Spa, Otilio Rojas, and Josep de la Puente
Geosci. Model Dev., 16, 7237–7252, https://doi.org/10.5194/gmd-16-7237-2023, https://doi.org/10.5194/gmd-16-7237-2023, 2023
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This paper develops a calibration methodology of all absorbing techniques typically used by Fourier pseudo-spectral time-domain (PSTD) methods for geoacoustic wave simulations. The main contributions of the paper are (a) an implementation and quantitative comparison of all absorbing techniques available for PSTD methods through a simple and robust numerical experiment, and (b) a validation of these absorbing techniques in several 3-D seismic scenarios with gradual heterogeneity complexities.
Michael Hillier, Florian Wellmann, Eric A. de Kemp, Boyan Brodaric, Ernst Schetselaar, and Karine Bédard
Geosci. Model Dev., 16, 6987–7012, https://doi.org/10.5194/gmd-16-6987-2023, https://doi.org/10.5194/gmd-16-6987-2023, 2023
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Neural networks can be used effectively to model three-dimensional geological structures from point data, sampling geological interfaces, units, and structural orientations. Existing neural network approaches for this type of modelling are advanced by the efficient incorporation of unconformities, new knowledge inputs, and improved data fitting techniques. These advances permit the modelling of more complex geology in diverse geological settings, different-sized areas, and various data regimes.
Kees Nederhoff, Maarten van Ormondt, Jay Veeramony, Ap van Dongeren, Jose Antolínez, Tim Leijnse, and Dano Roelvink
EGUsphere, https://doi.org/10.5194/egusphere-2023-2341, https://doi.org/10.5194/egusphere-2023-2341, 2023
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Forecasting tropical cyclones and their flooding impact is challenging. Our research introduces the Tropical Cyclone Forecasting Framework (TC-FF), enhancing cyclone predictions despite uncertainties. TC-FF generates global wind and flood scenarios, valuable even in data-limited regions. Applied to cases like Cyclone Idai, it showcases potential in bettering disaster preparation, marking progress in handling cyclone threats.
Stefan J. Miller, Paul A. Makar, and Colin J. Lee
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-159, https://doi.org/10.5194/gmd-2023-159, 2023
Revised manuscript accepted for GMD
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This work outlines a new solver written in Fortran 90 to calculate the partitioning of metastable aerosols at thermodynamic equilibrium based on the algorithms of ISORROPIA II. The new code includes numerical improvements that decrease the computational speed (compared to ISORROPIA II) while improving the accuracy of the partitioning solution.
Tor Nordam, Ruben Kristiansen, Raymond Nepstad, Erik van Sebille, and Andy M. Booth
Geosci. Model Dev., 16, 5339–5363, https://doi.org/10.5194/gmd-16-5339-2023, https://doi.org/10.5194/gmd-16-5339-2023, 2023
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We describe and compare two common methods, Eulerian and Lagrangian models, used to simulate the vertical transport of material in the ocean. They both solve the same transport problems but use different approaches for representing the underlying equations on the computer. The main focus of our study is on the numerical accuracy of the two approaches. Our results should be useful for other researchers creating or using these types of transport models.
Mathieu Gravey and Grégoire Mariethoz
Geosci. Model Dev., 16, 5265–5279, https://doi.org/10.5194/gmd-16-5265-2023, https://doi.org/10.5194/gmd-16-5265-2023, 2023
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Multiple‐point geostatistics are widely used to simulate complex spatial structures based on a training image. The use of these methods relies on the possibility of finding optimal training images and parametrization of the simulation algorithms. Here, we propose finding an optimal set of parameters using only the training image as input. The main advantage of our approach is to remove the risk of overfitting an objective function.
Fernanda Alvarado-Neves, Laurent Ailleres, Lachlan Grose, Alexander R. Cruden, and Robin Armit
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-85, https://doi.org/10.5194/gmd-2023-85, 2023
Revised manuscript accepted for GMD
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Previous work have demonstrated how adding geological knowledge to modelling methods create more accurate and reliable models. Following this reasoning, we added constraints from magma emplacement mechanisms into existing modelling frameworks to improve the 3D characterisation of igneous intrusions. We test the method in synthetic and real-world case studies, and the results show that our method can reproduce intrusion morphologies with no manual processing and using realistic datasets.
Siting Li, Ping Wang, Hong Wang, Yue Peng, Zhaodong Liu, Wenjie Zhang, Hongli Liu, Yaqiang Wang, Huizheng Che, and Xiaoye Zhang
Geosci. Model Dev., 16, 4171–4191, https://doi.org/10.5194/gmd-16-4171-2023, https://doi.org/10.5194/gmd-16-4171-2023, 2023
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Optimizing the initial state of atmospheric chemistry model input is one of the most essential methods to improve forecast accuracy. Considering the large computational load of the model, we introduce an ensemble optimal interpolation scheme (EnOI) for operational use and efficient updating of the initial fields of chemical components. The results suggest that EnOI provides a practical and cost-effective technique for improving the accuracy of chemical weather numerical forecasts.
Thomas Richter, Véronique Dansereau, Christian Lessig, and Piotr Minakowski
Geosci. Model Dev., 16, 3907–3926, https://doi.org/10.5194/gmd-16-3907-2023, https://doi.org/10.5194/gmd-16-3907-2023, 2023
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Sea ice covers not only the pole regions but affects the weather and climate globally. For example, its white surface reflects more sunlight than land. The oceans around the poles are therefore kept cool, which affects the circulation in the oceans worldwide. Simulating the behavior and changes in sea ice on a computer is, however, very difficult. We propose a new computer simulation that better models how cracks in the ice change over time and show this by comparing to other simulations.
Federica Castino, Feijia Yin, Volker Grewe, Hiroshi Yamashita, Sigrun Matthes, Simone Dietmüller, Sabine Baumann, Manuel Soler, Abolfazl Simorgh, Maximilian Mendiguchia Meuser, Florian Linke, and Benjamin Lührs
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-88, https://doi.org/10.5194/gmd-2023-88, 2023
Preprint under review for GMD
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We introduce SolFinder 1.0, a decision-making tool to select trade-offs between different objective functions, including fuel use, flight time, NOx emissions, contrail distance, and climate impact. The module is included in the AirTraf 3.0 submodel, which optimizes trajectories under weather conditions simulated by an atmospheric model (EMAC). This paper focuses on the ability of the module to identify eco-efficient trajectories, which reduce the flights climate impact at limited cost penalties.
Emma J. MacKie, Michael Field, Lijing Wang, Zhen Yin, Nathan Schoedl, Matthew Hibbs, and Allan Zhang
Geosci. Model Dev., 16, 3765–3783, https://doi.org/10.5194/gmd-16-3765-2023, https://doi.org/10.5194/gmd-16-3765-2023, 2023
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Earth scientists often have to fill in spatial gaps in measurements. This gap-filling or interpolation can be accomplished with geostatistical methods, where the statistical relationships between measurements are used to inform how these gaps should be filled. Despite the broad utility of these methods, there are few freely available geostatistical software applications. We present GStatSim, a Python package for performing different geostatistical interpolation methods.
Ian Madden, Simone Marras, and Jenny Suckale
Geosci. Model Dev., 16, 3479–3500, https://doi.org/10.5194/gmd-16-3479-2023, https://doi.org/10.5194/gmd-16-3479-2023, 2023
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To aid risk managers who may wish to rapidly assess tsunami risk but may lack high-performance computing infrastructure, we provide an accessible software package able to rapidly model tsunami inundation over real topography by leveraging Google's Tensor Processing Unit, a high-performance hardware. Minimally trained users can take advantage of the rapid modeling abilities provided by this package via a web browser thanks to the ease of use of Google Cloud Platform.
Youtong Rong, Paul Bates, and Jeffrey Neal
Geosci. Model Dev., 16, 3291–3311, https://doi.org/10.5194/gmd-16-3291-2023, https://doi.org/10.5194/gmd-16-3291-2023, 2023
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A novel subgrid channel (SGC) model is developed for river–floodplain modelling, allowing utilization of subgrid-scale bathymetric information while performing computations on relatively coarse grids. By including adaptive artificial diffusion, potential numerical instability, which the original SGC solver had, in low-friction regions such as urban areas is addressed. Evaluation of the new SGC model through structured tests confirmed that the accuracy and stability have improved.
Xiaqiong Zhou and Hann-Ming Henry Juang
Geosci. Model Dev., 16, 3263–3274, https://doi.org/10.5194/gmd-16-3263-2023, https://doi.org/10.5194/gmd-16-3263-2023, 2023
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The National Centers for Environmental Prediction Global Forecast System version 16 experienced model instability failures in real-time runs resolved by increasing the minimum thickness depth parameter. Further investigation revealed that the issue was caused by the advection of geopotential heights at the model's layer interfaces. By replacing high-order boundary conditions with zero-gradient boundary conditions for interface-wind reconstruction, the instability was effectively addressed.
Grant T. Euen, Shangxin Liu, Rene Gassmöller, Timo Heister, and Scott D. King
Geosci. Model Dev., 16, 3221–3239, https://doi.org/10.5194/gmd-16-3221-2023, https://doi.org/10.5194/gmd-16-3221-2023, 2023
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Due to the increasing availability of high-performance computing over the past few decades, numerical models have become an important tool for research. Here we test two geodynamic codes that produce such models: ASPECT, a newer code, and CitcomS, an older one. We show that they produce solutions that are extremely close. As methods and codes become more complex over time, showing reproducibility allows us to seamlessly link previously known information to modern methodologies.
Mohammad Kazem Sharifian, Georges Kesserwani, Alovya Ahmed Chowdhury, Jeffrey Neal, and Paul Bates
Geosci. Model Dev., 16, 2391–2413, https://doi.org/10.5194/gmd-16-2391-2023, https://doi.org/10.5194/gmd-16-2391-2023, 2023
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This paper describes a new release of the LISFLOOD-FP model for fast and efficient flood simulations. It features a new non-uniform grid generator that uses multiwavelet analyses to sensibly coarsens the resolutions where the local topographic variations are smooth. Moreover, the model is parallelised on the graphical processing units (GPUs) to further boost computational efficiency. The performance of the model is assessed for five real-world case studies, noting its potential applications.
André R. Brodtkorb, Anna Benedictow, Heiko Klein, Arve Kylling, Agnes Nyiri, Alvaro Valdebenito, Espen Sollum, and Nina Kristiansen
EGUsphere, https://doi.org/10.5194/egusphere-2023-51, https://doi.org/10.5194/egusphere-2023-51, 2023
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It is vital to know the extent and concentration of volcanic ash in the atmosphere during a volcanic eruption. Whilst satellite imagery may give an estimate of the ash right now (assuming no cloud coverage), we also need to know where it will be in the coming hours. This paper presents a method for estimating parameters for a volcanic eruption based on satellite observations of ash in the atmosphere. The software package is open source and applicable to similar inversion scenarios.
Bruno K. Zürcher
Geosci. Model Dev., 16, 1697–1711, https://doi.org/10.5194/gmd-16-1697-2023, https://doi.org/10.5194/gmd-16-1697-2023, 2023
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We present a novel algorithm to efficiently compute Barnes interpolation, which is a method for transforming data values recorded at irregularly spaced points into a corresponding regular grid. In contrast to naive implementations with an algorithmic complexity that depends on the product of the number of sample points and the number of grid points, our approach reduces this dependency to their sum.
Daniel Giles, Matthew M. Graham, Mosè Giordano, Tuomas Koskela, Alexandros Beskos, and Serge Guillas
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-38, https://doi.org/10.5194/gmd-2023-38, 2023
Revised manuscript accepted for GMD
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Digital twins of physical and human systems informed by real-time data are becoming ubiquitous across a wide range of settings. Progress for researchers is currently limited by a lack of tools to run these models effectively and efficiently. One of the current challenges is the optimal use of real-time observations. The work presented here focuses on a developed open source software platform which aims to improve this usage, with an emphasis placed on flexibility, efficiency and scalability.
David H. Marsico and Paul A. Ullrich
Geosci. Model Dev., 16, 1537–1551, https://doi.org/10.5194/gmd-16-1537-2023, https://doi.org/10.5194/gmd-16-1537-2023, 2023
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Climate models involve several different components, such as the atmosphere, ocean, and land models. Information needs to be exchanged, or remapped, between these models, and devising algorithms for performing this exchange is important for ensuring the accuracy of climate simulations. In this paper, we examine the efficacy of several traditional and novel approaches to remapping on the sphere and demonstrate where our approaches offer improvement.
Moritz Liebl, Jörg Robl, Stefan Hergarten, David Lundbek Egholm, and Kurt Stüwe
Geosci. Model Dev., 16, 1315–1343, https://doi.org/10.5194/gmd-16-1315-2023, https://doi.org/10.5194/gmd-16-1315-2023, 2023
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In this study, we benchmark a topography-based model for glacier erosion (OpenLEM) with a well-established process-based model (iSOSIA). Our experiments show that large-scale erosion patterns and particularly the transformation of valley length geometry from fluvial to glacial conditions are very similar in both models. This finding enables the application of OpenLEM to study the influence of climate and tectonics on glaciated mountains with reasonable computational effort on standard PCs.
James Kent, Thomas Melvin, and Golo Albert Wimmer
Geosci. Model Dev., 16, 1265–1276, https://doi.org/10.5194/gmd-16-1265-2023, https://doi.org/10.5194/gmd-16-1265-2023, 2023
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This paper introduces the Met Office's new shallow water model. The shallow water model is a building block towards the Met Office's new atmospheric dynamical core. The shallow water model is tested on a number of standard spherical shallow water test cases, including flow over mountains and unstable jets. Results show that the model produces similar results to other shallow water models in the literature.
Anthony Gruber, Max Gunzburger, Lili Ju, Rihui Lan, and Zhu Wang
Geosci. Model Dev., 16, 1213–1229, https://doi.org/10.5194/gmd-16-1213-2023, https://doi.org/10.5194/gmd-16-1213-2023, 2023
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This work applies a novel technical tool, multifidelity Monte Carlo (MFMC) estimation, to three climate-related benchmark experiments involving oceanic, atmospheric, and glacial modeling. By considering useful quantities such as maximum sea height and total (kinetic) energy, we show that MFMC leads to predictions which are more accurate and less costly than those obtained by standard methods. This suggests MFMC as a potential drop-in replacement for estimation in realistic climate models.
Piyoosh Jaysaval, Glenn E. Hammond, and Timothy C. Johnson
Geosci. Model Dev., 16, 961–976, https://doi.org/10.5194/gmd-16-961-2023, https://doi.org/10.5194/gmd-16-961-2023, 2023
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We present a robust and highly scalable implementation of numerical forward modeling and inversion algorithms for geophysical electrical resistivity tomography data. The implementation is publicly available and developed within the framework of PFLOTRAN (http://www.pflotran.org), an open-source, state-of-the-art massively parallel subsurface flow and transport simulation code. The paper details all the theoretical and implementation aspects of the new capabilities along with test examples.
Lucas Schauer, Michael J. Schmidt, Nicholas B. Engdahl, Stephen D. Pankavich, David A. Benson, and Diogo Bolster
Geosci. Model Dev., 16, 833–849, https://doi.org/10.5194/gmd-16-833-2023, https://doi.org/10.5194/gmd-16-833-2023, 2023
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We develop a multi-dimensional, parallelized domain decomposition strategy for mass-transfer particle tracking methods in two and three dimensions, investigate different procedures for decomposing the domain, and prescribe an optimal tiling based on physical problem parameters and the number of available CPU cores. For an optimally subdivided diffusion problem, the parallelized algorithm achieves nearly perfect linear speedup in comparison with the serial run-up to thousands of cores.
John Mern and Jef Caers
Geosci. Model Dev., 16, 289–313, https://doi.org/10.5194/gmd-16-289-2023, https://doi.org/10.5194/gmd-16-289-2023, 2023
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In this work, we formulate the sequential geoscientific data acquisition problem as a problem that is similar to playing chess against nature, except the pieces are not fully observed. Solutions to these problems are given in AI and rarely used in geoscientific data planning. We illustrate our approach to a simple 2D problem of mineral exploration.
Jevgenijs Steinbuks, Yongyang Cai, Jonas Jaegermeyr, and Thomas W. Hertel
EGUsphere, https://doi.org/10.5194/egusphere-2022-863, https://doi.org/10.5194/egusphere-2022-863, 2023
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This paper applies cutting-edge numerical methods to show how uncertain climate change and technological progress affect the future utilization of the scarce world's land resources. The paper's key insight is to illustrate how much global cropland will expand when future crop yields are unknown. The more uncertain the future crop yields are, the more forest conversion will be necessary to sustain human welfare. Some of that conversion takes place even when crop yields are not actually affected.
Ziqi Gao, Yifeng Wang, Petros Vasilakos, Cesunica E. Ivey, Khanh Do, and Armistead G. Russell
Geosci. Model Dev., 15, 9015–9029, https://doi.org/10.5194/gmd-15-9015-2022, https://doi.org/10.5194/gmd-15-9015-2022, 2022
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While the national ambient air quality standard of ozone is based on the 3-year average of the fourth highest 8 h maximum (MDA8) ozone concentrations, these predicted extreme values using numerical methods are always biased low. We built four computational models (GAM, MARS, random forest and SVR) to predict the fourth highest MDA8 ozone in Southern California using precursor emissions, meteorology and climatological patterns. All models presented acceptable performance, with GAM being the best.
Zhihao Wang, Jason Goetz, and Alexander Brenning
Geosci. Model Dev., 15, 8765–8784, https://doi.org/10.5194/gmd-15-8765-2022, https://doi.org/10.5194/gmd-15-8765-2022, 2022
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A lack of inventory data can be a limiting factor in developing landslide predictive models, which are crucial for supporting hazard policy and decision-making. We show how case-based reasoning and domain adaptation (transfer-learning techniques) can effectively retrieve similar landslide modeling situations for prediction in new data-scarce areas. Using cases in Italy, Austria, and Ecuador, our findings support the application of transfer learning for areas that require rapid model development.
Till Sachau, Haibin Yang, Justin Lang, Paul D. Bons, and Louis Moresi
Geosci. Model Dev., 15, 8749–8764, https://doi.org/10.5194/gmd-15-8749-2022, https://doi.org/10.5194/gmd-15-8749-2022, 2022
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Knowledge of the internal structures of the major continental ice sheets is improving, thanks to new investigative techniques. These structures are an essential indication of the flow behavior and dynamics of ice transport, which in turn is important for understanding the actual impact of the vast amounts of water trapped in continental ice sheets on global sea-level rise. The software studied here is specifically designed to simulate such structures and their evolution.
Keith J. Roberts, Alexandre Olender, Lucas Franceschini, Robert C. Kirby, Rafael S. Gioria, and Bruno S. Carmo
Geosci. Model Dev., 15, 8639–8667, https://doi.org/10.5194/gmd-15-8639-2022, https://doi.org/10.5194/gmd-15-8639-2022, 2022
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Finite-element methods (FEMs) permit the use of more flexible unstructured meshes but are rarely used in full waveform inversions (FWIs), an iterative process that reconstructs velocity models of earth’s subsurface, due to computational and memory storage costs. To reduce those costs, novel software is presented allowing the use of high-order mass-lumped FEMs on triangular meshes, together with a material-property mesh-adaptation performance-enhancing strategy, enabling its use in FWIs.
Konstantinos Papadakis, Yann Pfau-Kempf, Urs Ganse, Markus Battarbee, Markku Alho, Maxime Grandin, Maxime Dubart, Lucile Turc, Hongyang Zhou, Konstantinos Horaites, Ivan Zaitsev, Giulia Cozzani, Maarja Bussov, Evgeny Gordeev, Fasil Tesema, Harriet George, Jonas Suni, Vertti Tarvus, and Minna Palmroth
Geosci. Model Dev., 15, 7903–7912, https://doi.org/10.5194/gmd-15-7903-2022, https://doi.org/10.5194/gmd-15-7903-2022, 2022
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Vlasiator is a plasma simulation code that simulates the entire near-Earth space at a global scale. As 6D simulations require enormous amounts of computational resources, Vlasiator uses adaptive mesh refinement (AMR) to lighten the computational burden. However, due to Vlasiator’s grid topology, AMR simulations suffer from grid aliasing artifacts that affect the global results. In this work, we present and evaluate the performance of a mechanism for alleviating those artifacts.
Artur Safin, Damien Bouffard, Firat Ozdemir, Cintia L. Ramón, James Runnalls, Fotis Georgatos, Camille Minaudo, and Jonas Šukys
Geosci. Model Dev., 15, 7715–7730, https://doi.org/10.5194/gmd-15-7715-2022, https://doi.org/10.5194/gmd-15-7715-2022, 2022
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Reconciling the differences between numerical model predictions and observational data is always a challenge. In this paper, we investigate the viability of a novel approach to the calibration of a three-dimensional hydrodynamic model of Lake Geneva, where the target parameters are inferred in terms of distributions. We employ a filtering technique that generates physically consistent model trajectories and implement a neural network to enable bulk-to-skin temperature conversion.
Colin Grudzien and Marc Bocquet
Geosci. Model Dev., 15, 7641–7681, https://doi.org/10.5194/gmd-15-7641-2022, https://doi.org/10.5194/gmd-15-7641-2022, 2022
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Iterative optimization techniques, the state of the art in data assimilation, have largely focused on extending forecast accuracy to moderate- to long-range forecast systems. However, current methodology may not be cost-effective in reducing forecast errors in online, short-range forecast systems. We propose a novel optimization of these techniques for online, short-range forecast cycles, simultaneously providing an improvement in forecast accuracy and a reduction in the computational cost.
Yangyang Yu, Shaoqing Zhang, Haohuan Fu, Lixin Wu, Dexun Chen, Yang Gao, Zhiqiang Wei, Dongning Jia, and Xiaopei Lin
Geosci. Model Dev., 15, 6695–6708, https://doi.org/10.5194/gmd-15-6695-2022, https://doi.org/10.5194/gmd-15-6695-2022, 2022
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To understand the scientific consequence of perturbations caused by slave cores in heterogeneous computing environments, we examine the influence of perturbation amplitudes on the determination of the cloud bottom and cloud top and compute the probability density function (PDF) of generated clouds. A series of comparisons of the PDFs between homogeneous and heterogeneous systems show consistently acceptable error tolerances when using slave cores in heterogeneous computing environments.
Vijay S. Mahadevan, Jorge E. Guerra, Xiangmin Jiao, Paul Kuberry, Yipeng Li, Paul Ullrich, David Marsico, Robert Jacob, Pavel Bochev, and Philip Jones
Geosci. Model Dev., 15, 6601–6635, https://doi.org/10.5194/gmd-15-6601-2022, https://doi.org/10.5194/gmd-15-6601-2022, 2022
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Coupled Earth system models require transfer of field data between multiple components with varying spatial resolutions to determine the correct climate behavior. We present the Metrics for Intercomparison of Remapping Algorithms (MIRA) protocol to evaluate the accuracy, conservation properties, monotonicity, and local feature preservation of four different remapper algorithms for various unstructured mesh problems of interest. Future extensions to more practical use cases are also discussed.
Yilin Fang, L. Ruby Leung, Ryan Knox, Charlie Koven, and Ben Bond-Lamberty
Geosci. Model Dev., 15, 6385–6398, https://doi.org/10.5194/gmd-15-6385-2022, https://doi.org/10.5194/gmd-15-6385-2022, 2022
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Accounting for water movement in the soil and water transport within the plant is important for plant growth in Earth system modeling. We implemented different numerical approaches for a plant hydrodynamic model and compared their impacts on the simulated aboveground biomass (AGB) at single points and globally. We found care should be taken when discretizing the number of soil layers for numerical simulations as it can significantly affect AGB if accuracy and computational costs are of concern.
Andrew M. Bradley, Peter A. Bosler, and Oksana Guba
Geosci. Model Dev., 15, 6285–6310, https://doi.org/10.5194/gmd-15-6285-2022, https://doi.org/10.5194/gmd-15-6285-2022, 2022
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Tracer transport in atmosphere models can be computationally expensive. We describe a flexible and efficient interpolation semi-Lagrangian method, the Islet method. It permits using up to three grids that share an element grid: a dynamics grid for computing quantities such as the wind velocity; a physics parameterizations grid; and a tracer grid. The Islet method performs well on a number of verification problems and achieves high performance in the E3SM Atmosphere Model version 2.
Léo Pujol, Pierre-André Garambois, and Jérôme Monnier
Geosci. Model Dev., 15, 6085–6113, https://doi.org/10.5194/gmd-15-6085-2022, https://doi.org/10.5194/gmd-15-6085-2022, 2022
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This contribution presents a new numerical model for representing hydraulic–hydrological quantities at the basin scale. It allows modeling large areas at a low computational cost, with fine zooms where needed. It allows the integration of local and satellite measurements, via data assimilation methods, to improve the model's match to observations. Using this capability, good matches to in situ observations are obtained on a model of the complex Adour river network with fine zooms on floodplains.
Ludovic Räss, Ivan Utkin, Thibault Duretz, Samuel Omlin, and Yuri Y. Podladchikov
Geosci. Model Dev., 15, 5757–5786, https://doi.org/10.5194/gmd-15-5757-2022, https://doi.org/10.5194/gmd-15-5757-2022, 2022
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Continuum mechanics-based modelling of physical processes at large scale requires huge computational resources provided by massively parallel hardware such as graphical processing units. We present a suite of numerical algorithms, implemented using the Julia language, that efficiently leverages the parallelism. We demonstrate that our implementation is efficient, scalable and robust and showcase applications to various geophysical problems.
Meriem Krouma, Pascal Yiou, Céline Déandreis, and Soulivanh Thao
Geosci. Model Dev., 15, 4941–4958, https://doi.org/10.5194/gmd-15-4941-2022, https://doi.org/10.5194/gmd-15-4941-2022, 2022
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We evaluated the skill of a stochastic weather generator (SWG) to forecast precipitation at different time scales and in different areas of western Europe from analogs of Z500 hPa. The SWG has the skill to simulate precipitation for 5 and 10 d. We found that forecast weaknesses can be associated with specific weather patterns. The comparison with ECMWF forecasts confirms the skill of our model. This work is important because it provides information about weather forecasts over specific areas.
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Short summary
In systems such as atmospheric clouds, droplets undergo growth through condensation of vapor. The broadness of the resultant size spectrum of droplets influences precipitation likelihood and the radiative properties of clouds. One of the inherent limitations of simulations of the problem is the so-called numerical diffusion causing overestimation of the spectrum width, hence the term numerical broadening. In the paper, we take a closer look at one of the algorithms used in this context: MPDATA.
In systems such as atmospheric clouds, droplets undergo growth through condensation of vapor....
