Articles | Volume 15, issue 6
https://doi.org/10.5194/gmd-15-2619-2022
https://doi.org/10.5194/gmd-15-2619-2022
Model description paper
 | 
31 Mar 2022
Model description paper |  | 31 Mar 2022

Tree hydrodynamic modelling of the soil–plant–atmosphere continuum using FETCH3

Marcela Silva, Ashley M. Matheny, Valentijn R. N. Pauwels, Dimetre Triadis, Justine E. Missik, Gil Bohrer, and Edoardo Daly

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Cited articles

Abramowitz, M. and Stegun, I. A.: Handbook of Mathematical Functions with Formulas, Graphs, and Mathematical Tables, J. Am. Stat. Assoc., 59, 1324–1325, https://doi.org/10.2307/2282672, 1964. a
Allen, R., Pereira, L., Raes, D., and Smith, M.: Crop evapotranspiration – Guidelines for computing crop water requirements – FAO irrigation and drainage paper 56, Rome, FAO, http://www.fao.org/docrep/x0490e/x0490e00.htm (last access: 27 March 2022), 1998. a
Amenu, G. G. and Kumar, P.: A model for hydraulic redistribution incorporating coupled soil-root moisture transport, Hydrol. Earth Syst. Sci., 12, 55–74, https://doi.org/10.5194/hess-12-55-2008, 2008. a, b, c
Bartlett, M. S., Vico, G., and Porporato, A.: Coupled carbon and water fluxes in CAM photosynthesis: modeling quantification of water use efficiency and productivity, Plant Soil, 383, 111–138, https://doi.org/10.1007/s11104-014-2064-2, 2014. a
Bohrer, G., Mourad, H., Laursen, T. A., Drewry, D., Avissar, R., Poggi, D., Oren, R., and Katul, G. G.: Finite element tree crown hydrodynamics model (FETCH) using porous media flow within branching elements: A new representation of tree hydrodynamics, Water Resour. Res., 41, W11404, https://doi.org/10.1029/2005wr004181, 2005. a, b, c, d, e, f
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Short summary
Our study introduces FETCH3, a ready-to-use, open-access model that simulates the water fluxes across the soil, roots, and stem. To test the model capabilities, we tested it against exact solutions and a case study. The model presented considerably small errors when compared to the exact solutions and was able to correctly represent transpiration patterns when compared to experimental data. The results show that FETCH3 can correctly simulate above- and below-ground water transport.