Articles | Volume 14, issue 2
https://doi.org/10.5194/gmd-14-675-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-14-675-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Model description paper
| 
02 Feb 2021
Model description paper |
| 02 Feb 2021
| 02 Feb 2021
PyCHAM (v2.1.1): a Python box model for simulating aerosol chambers
Simon Patrick O'Meara
Department for Earth and Environmental Sciences, University of Manchester, Manchester, M13 9PL, UK
National Centre for Atmospheric Science, University of Manchester, Manchester, M13 9PL, UK
Shuxuan Xu
Department for Earth and Environmental Sciences, University of Manchester, Manchester, M13 9PL, UK
David Topping
Department for Earth and Environmental Sciences, University of Manchester, Manchester, M13 9PL, UK
M. Rami Alfarra
Department for Earth and Environmental Sciences, University of Manchester, Manchester, M13 9PL, UK
National Centre for Atmospheric Science, University of Manchester, Manchester, M13 9PL, UK
Gerard Capes
Research Computing Services, University of Manchester, Manchester, M13 9PL, UK
Douglas Lowe
Research Computing Services, University of Manchester, Manchester, M13 9PL, UK
Yunqi Shao
Department for Earth and Environmental Sciences, University of Manchester, Manchester, M13 9PL, UK
Gordon McFiggans
CORRESPONDING AUTHOR
Department for Earth and Environmental Sciences, University of Manchester, Manchester, M13 9PL, UK
Related authors
Yarê Baker, Sungah Kang, Hui Wang, Rongrong Wu, Jian Xu, Annika Zanders, Quanfu He, Thorsten Hohaus, Till Ziehm, Veronica Geretti, Thomas J. Bannan, Simon P. O'Meara, Aristeidis Voliotis, Mattias Hallquist, Gordon McFiggans, Sören R. Zorn, Andreas Wahner, and Thomas Mentel
EGUsphere, https://doi.org/10.5194/egusphere-2023-2402, https://doi.org/10.5194/egusphere-2023-2402, 2023
Short summary
Short summary
Highly oxygenated organic molecules are important contributors to secondary organic aerosol. Their yield depends on detailed atmospheric chemical composition. One important parameter is the ratio of hydroperoxy radicals to organic peroxy radicals (HO2/RO2) and we show that higher HO2/RO2 ratios lower the secondary organic aerosol yield. This of importance as laboratory studies are often biased towards organic peroxy radicals.
Yunqi Shao, Yu Wang, Mao Du, Aristeidis Voliotis, M. Rami Alfarra, Simon P. O'Meara, S. Fiona Turner, and Gordon McFiggans
Atmos. Meas. Tech., 15, 539–559, https://doi.org/10.5194/amt-15-539-2022, https://doi.org/10.5194/amt-15-539-2022, 2022
Short summary
Short summary
A comprehensive description and characterisation of the Manchester Aerosol Chamber (MAC) was conducted. The MAC has good temperature and relative humidity homogeneity, fast mixing times, and comparable losses of gases and particles with other chambers. The MAC's bespoke control system allows improved duty cycles and repeatable experiments. Moreover, the effect of contamination on performance was also investigated. It is highly recommended to regularly track the chamber's performance.
Kathryn Fowler, Paul J. Connolly, David O. Topping, and Simon O'Meara
Atmos. Chem. Phys., 18, 1629–1642, https://doi.org/10.5194/acp-18-1629-2018, https://doi.org/10.5194/acp-18-1629-2018, 2018
Short summary
Short summary
This is the first time the Maxwell–Stefan framework has been applied to an atmospheric aerosol core–shell model and shows that there is a complex interplay between the viscous and solubility effects on aerosol composition. Understanding aerosol composition is essential to accurately model their interactions within atmospheric systems. We use simple binary systems to demonstrate how viscosity and solubility both play a role in affecting the rate of diffusion through aerosol particles.
Simon O'Meara, David O. Topping, Rahul A. Zaveri, and Gordon McFiggans
Atmos. Chem. Phys., 17, 10477–10494, https://doi.org/10.5194/acp-17-10477-2017, https://doi.org/10.5194/acp-17-10477-2017, 2017
Short summary
Short summary
To simulate particle-phase diffusion, an analytical expression is desired because it takes less calculation time than a differential equation. Here a correction is found for the analytical solution for when diffusivity is dependent on composition, thereby making it more widely applicable than before. Consequently, we are able to more realistically evaluate the rate limitation (if any) imposed by particle-phase diffusion on component partitioning between the gas and particle phase.
Simon O'Meara, David O. Topping, and Gordon McFiggans
Atmos. Chem. Phys., 16, 5299–5313, https://doi.org/10.5194/acp-16-5299-2016, https://doi.org/10.5194/acp-16-5299-2016, 2016
Short summary
Short summary
To understand the effect of atmospheric particulate matter on climate and human health we need to know how it evolves. We investigate how best to estimate diffusion of components through particles by comparing diffusion times from three approaches to solving Fick's Law and find that they agree. This means that scientists can simulate Fickian diffusion through atmospheric particles using the approach best suited to their requirements and have confidence that their model is mathematically sound.
Yarê Baker, Sungah Kang, Hui Wang, Rongrong Wu, Jian Xu, Annika Zanders, Quanfu He, Thorsten Hohaus, Till Ziehm, Veronica Geretti, Thomas J. Bannan, Simon P. O'Meara, Aristeidis Voliotis, Mattias Hallquist, Gordon McFiggans, Sören R. Zorn, Andreas Wahner, and Thomas Mentel
EGUsphere, https://doi.org/10.5194/egusphere-2023-2402, https://doi.org/10.5194/egusphere-2023-2402, 2023
Short summary
Short summary
Highly oxygenated organic molecules are important contributors to secondary organic aerosol. Their yield depends on detailed atmospheric chemical composition. One important parameter is the ratio of hydroperoxy radicals to organic peroxy radicals (HO2/RO2) and we show that higher HO2/RO2 ratios lower the secondary organic aerosol yield. This of importance as laboratory studies are often biased towards organic peroxy radicals.
Ernesto Reyes-Villegas, Douglas Lowe, Jill S. Johnson, Kenneth S. Carslaw, Eoghan Darbyshire, Michael Flynn, James D. Allan, Hugh Coe, Ying Chen, Oliver Wild, Scott Archer-Nicholls, Alex Archibald, Siddhartha Singh, Manish Shrivastava, Rahul A. Zaveri, Vikas Singh, Gufran Beig, Ranjeet Sokhi, and Gordon McFiggans
Atmos. Chem. Phys., 23, 5763–5782, https://doi.org/10.5194/acp-23-5763-2023, https://doi.org/10.5194/acp-23-5763-2023, 2023
Short summary
Short summary
Organic aerosols (OAs), their sources and their processes remain poorly understood. The volatility basis set (VBS) approach, implemented in air quality models such as WRF-Chem, can be a useful tool to describe primary OA (POA) production and aging. However, the main disadvantage is its complexity. We used a Gaussian process simulator to reproduce model results and to estimate the sources of model uncertainty. We do this by comparing the outputs with OA observations made at Delhi, India, in 2018.
Aristeidis Voliotis, Mao Du, Yu Wang, Yunqi Shao, M. Rami Alfarra, Thomas J. Bannan, Dawei Hu, Kelly L. Pereira, Jaqueline F. Hamilton, Mattias Hallquist, Thomas F. Mentel, and Gordon McFiggans
Atmos. Chem. Phys., 22, 14147–14175, https://doi.org/10.5194/acp-22-14147-2022, https://doi.org/10.5194/acp-22-14147-2022, 2022
Short summary
Short summary
Mixing experiments are crucial and highly beneficial for our understanding of atmospheric chemical interactions. However, interpretation quickly becomes complex, and both the experimental design and evaluation need to be scrutinised carefully. Advanced online and offline compositional measurements can reveal substantial additional information to aid in the interpretation of yield data, including components uniquely found in mixtures and property changes in SOA formed from mixtures of VOCs.
Johana Romero-Alvarez, Aurelia Lupaşcu, Douglas Lowe, Alba Badia, Scott Archer-Nicholls, Steve Dorling, Claire E. Reeves, and Tim Butler
Atmos. Chem. Phys., 22, 13797–13815, https://doi.org/10.5194/acp-22-13797-2022, https://doi.org/10.5194/acp-22-13797-2022, 2022
Short summary
Short summary
As ozone can be transported across countries, efficient air quality management and regulatory policies rely on the assessment of local ozone production vs. transport. In our study, we investigate the origin of surface ozone in the UK and the contribution of the different source regions to regulatory ozone metrics. It is shown that emission controls would be necessary over western Europe to improve health-related metrics and over larger areas to reduce impacts on ecosystems.
Aristeidis Voliotis, Mao Du, Yu Wang, Yunqi Shao, Thomas J. Bannan, Michael Flynn, Spyros N. Pandis, Carl J. Percival, M. Rami Alfarra, and Gordon McFiggans
Atmos. Chem. Phys., 22, 13677–13693, https://doi.org/10.5194/acp-22-13677-2022, https://doi.org/10.5194/acp-22-13677-2022, 2022
Short summary
Short summary
The addition of a low-yield precursor to the reactive mixture of aVOC and bVOC can increase or decrease the SOA volatility that is system-dependent. Therefore, the SOA volatility of the mixtures cannot always be predicted based on the additivity. In complex mixtures the formation of lower-volatility products likely outweighs the formation of products with higher volatility. The unique products of each mixture contribute significantly to the signal, suggesting interactions can be important.
Yunqi Shao, Aristeidis Voliotis, Mao Du, Yu Wang, Kelly Pereira, Jacqueline Hamilton, M. Rami Alfarra, and Gordon McFiggans
Atmos. Chem. Phys., 22, 9799–9826, https://doi.org/10.5194/acp-22-9799-2022, https://doi.org/10.5194/acp-22-9799-2022, 2022
Short summary
Short summary
This study explored the chemical properties of secondary organic aerosol (SOA) that formed from photo-oxidation of single and mixed biogenic and anthropogenic precursors. We showed that SOA chemical properties in a mixed vapour system are mainly affected by the
higher-yield precursor's oxidation products and products from
cross-product formation. This study also identifies potential tracer compounds in a mixed vapour system that might be used in SOA source attribution in future ambient studies.
Mao Du, Aristeidis Voliotis, Yunqi Shao, Yu Wang, Thomas J. Bannan, Kelly L. Pereira, Jacqueline F. Hamilton, Carl J. Percival, M. Rami Alfarra, and Gordon McFiggans
Atmos. Meas. Tech., 15, 4385–4406, https://doi.org/10.5194/amt-15-4385-2022, https://doi.org/10.5194/amt-15-4385-2022, 2022
Short summary
Short summary
Atmospheric chemistry plays a key role in the understanding of aerosol formation and air pollution. We designed chamber experiments for the characterization of secondary organic aerosol (SOA) from a biogenic precursor with inorganic seed. Our results highlight the advantages of a combination of online FIGAERO-CIMS and offline LC-Orbitrap MS analytical techniques to characterize the chemical composition of SOA in chamber studies.
Matthias Karl, Liisa Pirjola, Tiia Grönholm, Mona Kurppa, Srinivasan Anand, Xiaole Zhang, Andreas Held, Rolf Sander, Miikka Dal Maso, David Topping, Shuai Jiang, Leena Kangas, and Jaakko Kukkonen
Geosci. Model Dev., 15, 3969–4026, https://doi.org/10.5194/gmd-15-3969-2022, https://doi.org/10.5194/gmd-15-3969-2022, 2022
Short summary
Short summary
The community aerosol dynamics model MAFOR includes several advanced features: coupling with an up-to-date chemistry mechanism for volatile organic compounds, a revised Brownian coagulation kernel that takes into account the fractal geometry of soot particles, a multitude of nucleation parameterizations, size-resolved partitioning of semi-volatile inorganics, and a hybrid method for the formation of secondary organic aerosols within the framework of condensation and evaporation.
Yu Wang, Aristeidis Voliotis, Dawei Hu, Yunqi Shao, Mao Du, Ying Chen, Judith Kleinheins, Claudia Marcolli, M. Rami Alfarra, and Gordon McFiggans
Atmos. Chem. Phys., 22, 4149–4166, https://doi.org/10.5194/acp-22-4149-2022, https://doi.org/10.5194/acp-22-4149-2022, 2022
Short summary
Short summary
Aerosol water uptake plays a key role in atmospheric physicochemical processes. We designed chamber experiments on aerosol water uptake of secondary organic aerosol (SOA) from mixed biogenic and anthropogenic precursors with inorganic seed. Our results highlight this chemical composition influences the reconciliation of the sub- and super-saturated water uptake, providing laboratory evidence for understanding the chemical controls of water uptake of the multi-component aerosol.
Jessica Slater, Hugh Coe, Gordon McFiggans, Juha Tonttila, and Sami Romakkaniemi
Atmos. Chem. Phys., 22, 2937–2953, https://doi.org/10.5194/acp-22-2937-2022, https://doi.org/10.5194/acp-22-2937-2022, 2022
Short summary
Short summary
This paper shows the specific impact of black carbon (BC) on the aerosol–planetary boundary layer (PBL) feedback and its influence on a Beijing haze episode. Overall, this paper shows that strong temperature inversions prevent BC heating within the PBL from significantly increasing PBL height, while BC above the PBL suppresses PBL development significantly through the day. From this we suggest a method by which both locally and regionally emitted BC may impact urban pollution episodes.
Yunqi Shao, Yu Wang, Mao Du, Aristeidis Voliotis, M. Rami Alfarra, Simon P. O'Meara, S. Fiona Turner, and Gordon McFiggans
Atmos. Meas. Tech., 15, 539–559, https://doi.org/10.5194/amt-15-539-2022, https://doi.org/10.5194/amt-15-539-2022, 2022
Short summary
Short summary
A comprehensive description and characterisation of the Manchester Aerosol Chamber (MAC) was conducted. The MAC has good temperature and relative humidity homogeneity, fast mixing times, and comparable losses of gases and particles with other chambers. The MAC's bespoke control system allows improved duty cycles and repeatable experiments. Moreover, the effect of contamination on performance was also investigated. It is highly recommended to regularly track the chamber's performance.
Dawei Hu, M. Rami Alfarra, Kate Szpek, Justin M. Langridge, Michael I. Cotterell, Claire Belcher, Ian Rule, Zixia Liu, Chenjie Yu, Yunqi Shao, Aristeidis Voliotis, Mao Du, Brett Smith, Greg Smallwood, Prem Lobo, Dantong Liu, Jim M. Haywood, Hugh Coe, and James D. Allan
Atmos. Chem. Phys., 21, 16161–16182, https://doi.org/10.5194/acp-21-16161-2021, https://doi.org/10.5194/acp-21-16161-2021, 2021
Short summary
Short summary
Here, we developed new techniques for investigating these properties in the laboratory and applied these to BC and BrC from different sources, including diesel exhaust, inverted propane flame and wood combustion. These have allowed us to quantify the changes in shape and chemical composition of different soots according to source and variables such as the moisture content of wood.
Aristeidis Voliotis, Yu Wang, Yunqi Shao, Mao Du, Thomas J. Bannan, Carl J. Percival, Spyros N. Pandis, M. Rami Alfarra, and Gordon McFiggans
Atmos. Chem. Phys., 21, 14251–14273, https://doi.org/10.5194/acp-21-14251-2021, https://doi.org/10.5194/acp-21-14251-2021, 2021
Short summary
Short summary
Secondary organic aerosol (SOA) formation from mixtures of volatile precursors can be affected by the molecular interactions of the products. Composition and volatility measurements of SOA formed from mixtures of anthropogenic and biogenic precursors reveal processes that can increase or decrease the SOA volatility. The unique products of the mixture were more oxygenated and less volatile than those from either precursor. Analytical context is provided to explore the SOA volatility in mixtures.
Ernesto Reyes-Villegas, Upasana Panda, Eoghan Darbyshire, James M. Cash, Rutambhara Joshi, Ben Langford, Chiara F. Di Marco, Neil J. Mullinger, Mohammed S. Alam, Leigh R. Crilley, Daniel J. Rooney, W. Joe F. Acton, Will Drysdale, Eiko Nemitz, Michael Flynn, Aristeidis Voliotis, Gordon McFiggans, Hugh Coe, James Lee, C. Nicholas Hewitt, Mathew R. Heal, Sachin S. Gunthe, Tuhin K. Mandal, Bhola R. Gurjar, Shivani, Ranu Gadi, Siddhartha Singh, Vijay Soni, and James D. Allan
Atmos. Chem. Phys., 21, 11655–11667, https://doi.org/10.5194/acp-21-11655-2021, https://doi.org/10.5194/acp-21-11655-2021, 2021
Short summary
Short summary
This paper shows the first multisite online measurements of PM1 in Delhi, India, with measurements over different seasons in Old Delhi and New Delhi in 2018. Organic aerosol (OA) source apportionment was performed using positive matrix factorisation (PMF). Traffic was the main primary aerosol source for both OAs and black carbon, seen with PMF and Aethalometer model analysis, indicating that control of primary traffic exhaust emissions would make a significant reduction to Delhi air pollution.
Yu Wang, Aristeidis Voliotis, Yunqi Shao, Taomou Zong, Xiangxinyue Meng, Mao Du, Dawei Hu, Ying Chen, Zhijun Wu, M. Rami Alfarra, and Gordon McFiggans
Atmos. Chem. Phys., 21, 11303–11316, https://doi.org/10.5194/acp-21-11303-2021, https://doi.org/10.5194/acp-21-11303-2021, 2021
Short summary
Short summary
Aerosol phase behaviour plays a profound role in atmospheric physicochemical processes. We designed dedicated chamber experiments to study the phase state of secondary organic aerosol from biogenic and anthropogenic mixed precursors. Our results highlight the key role of the organic–inorganic ratio and relative humidity in phase state, but the sources and organic composition are less important. The result provides solid laboratory evidence for understanding aerosol phase in a complex atmosphere.
Langwen Huang and David Topping
Geosci. Model Dev., 14, 2187–2203, https://doi.org/10.5194/gmd-14-2187-2021, https://doi.org/10.5194/gmd-14-2187-2021, 2021
Short summary
Short summary
As our knowledge and understanding of atmospheric aerosol particle evolution and impact grows, designing community mechanistic models requires an ability to capture increasing chemical, physical and therefore numerical complexity. As the landscape of computing software and hardware evolves, it is important to profile the usefulness of emerging platforms in tackling this complexity. With this in mind we present JlBox v1.1, written in Julia.
Michael Priestley, Thomas J. Bannan, Michael Le Breton, Stephen D. Worrall, Sungah Kang, Iida Pullinen, Sebastian Schmitt, Ralf Tillmann, Einhard Kleist, Defeng Zhao, Jürgen Wildt, Olga Garmash, Archit Mehra, Asan Bacak, Dudley E. Shallcross, Astrid Kiendler-Scharr, Åsa M. Hallquist, Mikael Ehn, Hugh Coe, Carl J. Percival, Mattias Hallquist, Thomas F. Mentel, and Gordon McFiggans
Atmos. Chem. Phys., 21, 3473–3490, https://doi.org/10.5194/acp-21-3473-2021, https://doi.org/10.5194/acp-21-3473-2021, 2021
Short summary
Short summary
A significant fraction of emissions from human activity consists of aromatic hydrocarbons, e.g. benzene, which oxidise to form new compounds important for particle growth. Characterisation of benzene oxidation products highlights the range of species produced as well as their chemical properties and contextualises them within relevant frameworks, e.g. MCM. Cluster analysis of the oxidation product time series distinguishes behaviours of CHON compounds that could aid in identifying functionality.
Douglas Morrison, Ian Crawford, Nicholas Marsden, Michael Flynn, Katie Read, Luis Neves, Virginia Foot, Paul Kaye, Warren Stanley, Hugh Coe, David Topping, and Martin Gallagher
Atmos. Chem. Phys., 20, 14473–14490, https://doi.org/10.5194/acp-20-14473-2020, https://doi.org/10.5194/acp-20-14473-2020, 2020
Short summary
Short summary
We provide conservative estimates of the concentrations of bacteria within transatlantic dust clouds, originating from the African continent. We observe significant seasonal differences in the overall concentrations of particles but no seasonal variation in the ratio between bacteria and dust. With bacteria contributing to ice formation at warmer temperatures than dust, our observations should improve the accuracy of climate models.
Jessica Slater, Juha Tonttila, Gordon McFiggans, Paul Connolly, Sami Romakkaniemi, Thomas Kühn, and Hugh Coe
Atmos. Chem. Phys., 20, 11893–11906, https://doi.org/10.5194/acp-20-11893-2020, https://doi.org/10.5194/acp-20-11893-2020, 2020
Short summary
Short summary
The feedback effect between aerosol particles, radiation and meteorology reduces turbulent motion and results in increased surface aerosol concentrations during Beijing haze. Observational analysis and regional modelling studies have examined the feedback effect but these studies are limited. In this work, we set up a high-resolution model for the Beijing environment to examine the sensitivity of the aerosol feedback effect to initial meteorological conditions and aerosol loading.
David Topping, David Watts, Hugh Coe, James Evans, Thomas J. Bannan, Douglas Lowe, Caroline Jay, and Jonathan W. Taylor
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2020-270, https://doi.org/10.5194/gmd-2020-270, 2020
Publication in GMD not foreseen
Short summary
Short summary
Time-series forecasting methods have often been used to mitigate some of the challenges associated with deploying chemical transport models. In this study we deploy and evaluate Facebook’s Prophetmodel v0.6 in predicting hourly concentrations of Nitrogen Dioxide [NO2]. et. Overall we find the Prophet model offers a relatively effective and simple way to make predictions about NO2 at local levels.
Petroc D. Shelley, Thomas J. Bannan, Stephen D. Worrall, M. Rami Alfarra, Ulrich K. Krieger, Carl J. Percival, Arthur Garforth, and David Topping
Atmos. Chem. Phys., 20, 8293–8314, https://doi.org/10.5194/acp-20-8293-2020, https://doi.org/10.5194/acp-20-8293-2020, 2020
Short summary
Short summary
The methods used to estimate the vapour pressures of compounds in the atmosphere typically perform poorly when applied to organic compounds found in the atmosphere. New measurements have been made and compared to previous experimental data and estimated values so that the limitations within the estimation methods can be identified and in the future be rectified.
Natalie R. Gervasi, David O. Topping, and Andreas Zuend
Atmos. Chem. Phys., 20, 2987–3008, https://doi.org/10.5194/acp-20-2987-2020, https://doi.org/10.5194/acp-20-2987-2020, 2020
Short summary
Short summary
Organic aerosols have been shown to exist often in a semi-solid or amorphous, glassy state. Highly viscous particles behave differently than their well-mixed liquid analogues with consequences for a variety of aerosol processes. Here, we introduce a new predictive mixture viscosity model called AIOMFAC-VISC. It enables us to predict the viscosity of aqueous organic mixtures as a function of temperature and chemical composition, covering the full range of liquid, semi-solid, and glassy states.
Parya Broomandi, Xueyu Geng, Weisi Guo, Jong Ryeol Kim, Alessio Pagani, and David Topping
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2019-342, https://doi.org/10.5194/gmd-2019-342, 2020
Revised manuscript not accepted
Short summary
Short summary
As a result of our novel graph-based reduced modeling, we are able to represent high-dimensional knowledge into a causal inference and stability framework.
Yu Wang, Ying Chen, Zhijun Wu, Dongjie Shang, Yuxuan Bian, Zhuofei Du, Sebastian H. Schmitt, Rong Su, Georgios I. Gkatzelis, Patrick Schlag, Thorsten Hohaus, Aristeidis Voliotis, Keding Lu, Limin Zeng, Chunsheng Zhao, M. Rami Alfarra, Gordon McFiggans, Alfred Wiedensohler, Astrid Kiendler-Scharr, Yuanhang Zhang, and Min Hu
Atmos. Chem. Phys., 20, 2161–2175, https://doi.org/10.5194/acp-20-2161-2020, https://doi.org/10.5194/acp-20-2161-2020, 2020
Short summary
Short summary
Severe haze events, with high particulate nitrate (pNO3−) burden, frequently prevail in Beijing. In this study, we demonstrate a mutual-promotion effect between aerosol water uptake and pNO3− formation backed up by theoretical calculations and field observations throughout a typical pNO3−-dominated haze event in Beijing wintertime. This self-amplified mutual-promotion effect between aerosol water content and particulate nitrate can rapidly deteriorate air quality and degrade visibility.
Kathryn Fowler, Paul Connolly, and David Topping
Atmos. Chem. Phys., 20, 683–698, https://doi.org/10.5194/acp-20-683-2020, https://doi.org/10.5194/acp-20-683-2020, 2020
Short summary
Short summary
Observations of low–temperature cirrus clouds have found unexpectedly low ice crystal numbers and high supersaturations, suggesting an incomplete understanding of the freezing mechanisms under these conditions. The existence of viscous organic aerosol has offered alternative ice nucleation pathways, which have been observed in laboratory studies. We have developed the first cloud parcel model to investigate the effect of viscosity on ice nucleation.
Olga Garmash, Matti P. Rissanen, Iida Pullinen, Sebastian Schmitt, Oskari Kausiala, Ralf Tillmann, Defeng Zhao, Carl Percival, Thomas J. Bannan, Michael Priestley, Åsa M. Hallquist, Einhard Kleist, Astrid Kiendler-Scharr, Mattias Hallquist, Torsten Berndt, Gordon McFiggans, Jürgen Wildt, Thomas F. Mentel, and Mikael Ehn
Atmos. Chem. Phys., 20, 515–537, https://doi.org/10.5194/acp-20-515-2020, https://doi.org/10.5194/acp-20-515-2020, 2020
Short summary
Short summary
Highly oxygenated organic molecules (HOMs) facilitate aerosol formation in the atmosphere. Using NO3− chemical ionization mass spectrometry we investigated HOM composition and yield in oxidation of aromatic compounds at different reactant concentrations, in the presence of NOx and seed aerosol. Higher OH concentrations increased HOM yield, suggesting multiple oxidation steps, and affected HOM composition, potentially explaining in part discrepancies in published secondary organic aerosol yields.
Ying Chen, Oliver Wild, Edmund Ryan, Saroj Kumar Sahu, Douglas Lowe, Scott Archer-Nicholls, Yu Wang, Gordon McFiggans, Tabish Ansari, Vikas Singh, Ranjeet S. Sokhi, Alex Archibald, and Gufran Beig
Atmos. Chem. Phys., 20, 499–514, https://doi.org/10.5194/acp-20-499-2020, https://doi.org/10.5194/acp-20-499-2020, 2020
Short summary
Short summary
PM2.5 and O3 are two major air pollutants. Some mitigation strategies focusing on reducing PM2.5 may lead to substantial increase in O3. We use statistical emulation combined with atmospheric transport model to perform thousands of sensitivity numerical studies to identify the major sources of PM2.5 and O3 and to develop strategies targeted at both pollutants. Our scientific evidence suggests that regional coordinated emission control is required to mitigate PM2.5 whilst preventing O3 increase.
Laura Kiely, Dominick V. Spracklen, Christine Wiedinmyer, Luke Conibear, Carly L. Reddington, Scott Archer-Nicholls, Douglas Lowe, Stephen R. Arnold, Christoph Knote, Md Firoz Khan, Mohd Talib Latif, Mikinori Kuwata, Sri Hapsari Budisulistiorini, and Lailan Syaufina
Atmos. Chem. Phys., 19, 11105–11121, https://doi.org/10.5194/acp-19-11105-2019, https://doi.org/10.5194/acp-19-11105-2019, 2019
Short summary
Short summary
In 2015, a large fire episode occurred in Indonesia, reducing air quality. Fires occurred predominantly on peatland, where large uncertainties are associated with emissions. Current fire emissions datasets underestimate peat fire emissions. We created new fire emissions data, with data specific to Indonesian peat fires. Using these emissions in simulations of particulate matter and aerosol optical depth shows an improvement over simulations using current data, when compared with observations.
Zongbo Shi, Tuan Vu, Simone Kotthaus, Roy M. Harrison, Sue Grimmond, Siyao Yue, Tong Zhu, James Lee, Yiqun Han, Matthias Demuzere, Rachel E. Dunmore, Lujie Ren, Di Liu, Yuanlin Wang, Oliver Wild, James Allan, W. Joe Acton, Janet Barlow, Benjamin Barratt, David Beddows, William J. Bloss, Giulia Calzolai, David Carruthers, David C. Carslaw, Queenie Chan, Lia Chatzidiakou, Yang Chen, Leigh Crilley, Hugh Coe, Tie Dai, Ruth Doherty, Fengkui Duan, Pingqing Fu, Baozhu Ge, Maofa Ge, Daobo Guan, Jacqueline F. Hamilton, Kebin He, Mathew Heal, Dwayne Heard, C. Nicholas Hewitt, Michael Hollaway, Min Hu, Dongsheng Ji, Xujiang Jiang, Rod Jones, Markus Kalberer, Frank J. Kelly, Louisa Kramer, Ben Langford, Chun Lin, Alastair C. Lewis, Jie Li, Weijun Li, Huan Liu, Junfeng Liu, Miranda Loh, Keding Lu, Franco Lucarelli, Graham Mann, Gordon McFiggans, Mark R. Miller, Graham Mills, Paul Monk, Eiko Nemitz, Fionna O'Connor, Bin Ouyang, Paul I. Palmer, Carl Percival, Olalekan Popoola, Claire Reeves, Andrew R. Rickard, Longyi Shao, Guangyu Shi, Dominick Spracklen, David Stevenson, Yele Sun, Zhiwei Sun, Shu Tao, Shengrui Tong, Qingqing Wang, Wenhua Wang, Xinming Wang, Xuejun Wang, Zifang Wang, Lianfang Wei, Lisa Whalley, Xuefang Wu, Zhijun Wu, Pinhua Xie, Fumo Yang, Qiang Zhang, Yanli Zhang, Yuanhang Zhang, and Mei Zheng
Atmos. Chem. Phys., 19, 7519–7546, https://doi.org/10.5194/acp-19-7519-2019, https://doi.org/10.5194/acp-19-7519-2019, 2019
Short summary
Short summary
APHH-Beijing is a collaborative international research programme to study the sources, processes and health effects of air pollution in Beijing. This introduction to the special issue provides an overview of (i) the APHH-Beijing programme, (ii) the measurement and modelling activities performed as part of it and (iii) the air quality and meteorological conditions during joint intensive field campaigns as a core activity within APHH-Beijing.
Eoghan Darbyshire, William T. Morgan, James D. Allan, Dantong Liu, Michael J. Flynn, James R. Dorsey, Sebastian J. O'Shea, Douglas Lowe, Kate Szpek, Franco Marenco, Ben T. Johnson, Stephane Bauguitte, Jim M. Haywood, Joel F. Brito, Paulo Artaxo, Karla M. Longo, and Hugh Coe
Atmos. Chem. Phys., 19, 5771–5790, https://doi.org/10.5194/acp-19-5771-2019, https://doi.org/10.5194/acp-19-5771-2019, 2019
Short summary
Short summary
A novel analysis of aerosol and gas-phase vertical profiles shows a marked regional pollution contrast: composition is driven by the fire regime and vertical distribution is driven by thermodynamics. These drivers ought to be well represented in simulations to ensure realistic prediction of climate and air quality impacts. The BC : CO ratio in haze and plumes increases with altitude – long-range transport or fire stage coupled to plume dynamics may be responsible. Further enquiry is advocated.
Thomas J. Bannan, Michael Le Breton, Michael Priestley, Stephen D. Worrall, Asan Bacak, Nicholas A. Marsden, Archit Mehra, Julia Hammes, Mattias Hallquist, M. Rami Alfarra, Ulrich K. Krieger, Jonathan P. Reid, John Jayne, Wade Robinson, Gordon McFiggans, Hugh Coe, Carl J. Percival, and Dave Topping
Atmos. Meas. Tech., 12, 1429–1439, https://doi.org/10.5194/amt-12-1429-2019, https://doi.org/10.5194/amt-12-1429-2019, 2019
Short summary
Short summary
The Filter Inlet for Gases and AEROsols (FIGAERO) is an inlet designed to be coupled with a high-resolution time-of-flight chemical ionization mass spectrometer (HR-ToF-CIMS) and provides simultaneous molecular information relating to both the gas- and particle-phase samples. This method has been used to extract vapour pressures of compounds whilst giving quantitative concentrations in the particle phase. Here we detail an ideal set of benchmark compounds for characterization of the FIGAERO.
Elizabeth Forde, Martin Gallagher, Virginia Foot, Roland Sarda-Esteve, Ian Crawford, Paul Kaye, Warren Stanley, and David Topping
Atmos. Chem. Phys., 19, 1665–1684, https://doi.org/10.5194/acp-19-1665-2019, https://doi.org/10.5194/acp-19-1665-2019, 2019
Short summary
Short summary
The abundance and diversity of airborne biological particles in different environments remains poorly constrained. Measurements of such particles were conducted at four sites in the United Kingdom, using real-time fluorescence instrumentation. Using local land cover types, sources of suspected particle types were identified and compared. Most sites exhibited a wet-discharged fungal spore dominance, with the exception of one site, which was inferred to be influenced by a local dairy farm.
Simon Ruske, David O. Topping, Virginia E. Foot, Andrew P. Morse, and Martin W. Gallagher
Atmos. Meas. Tech., 11, 6203–6230, https://doi.org/10.5194/amt-11-6203-2018, https://doi.org/10.5194/amt-11-6203-2018, 2018
Short summary
Short summary
Pollen, bacteria and fungal spores are common in the environment, can have very important implications for public health and may influence the weather. Biological sensors potentially could be used to monitor quantities of these types of particles. However, it is important to transform the measurements from these instruments into counts of these biological particles. The paper tests a variety of approaches for achieving this aim on data collected in a laboratory.
Dawei Hu, David Topping, and Gordon McFiggans
Atmos. Chem. Phys., 18, 14925–14937, https://doi.org/10.5194/acp-18-14925-2018, https://doi.org/10.5194/acp-18-14925-2018, 2018
Short summary
Short summary
Co-condensation of inorganic or organic vapours on growing droplets could significantly enhance both CCN and cloud droplet number concentration, thereby influencing climate. Until now, there has been very few direct observational evidence of this process. We exposed involatile inorganic particles to a moist atmosphere containing a controlled amount of an organic semi-volatile vapour. We measured a much greater growth of the particles than if they had only been exposed to water vapour.
Matthew Crooks, Paul Connolly, and Gordon McFiggans
Geosci. Model Dev., 11, 3261–3278, https://doi.org/10.5194/gmd-11-3261-2018, https://doi.org/10.5194/gmd-11-3261-2018, 2018
Short summary
Short summary
Clouds form when water condenses onto particles in the atmosphere and the size and chemical composition of these particles can have a large influence over how much water condenses and the subsequent formation of cloud. Additional gases exist in the atmosphere that can condense onto the aerosol particles and change their composition. We present a fast and efficient method of calculating the effect of atmospheric gases on the formation of cloud that can be used in climate and weather models.
Kelly L. Pereira, Rachel Dunmore, James Whitehead, M. Rami Alfarra, James D. Allan, Mohammed S. Alam, Roy M. Harrison, Gordon McFiggans, and Jacqueline F. Hamilton
Atmos. Chem. Phys., 18, 11073–11096, https://doi.org/10.5194/acp-18-11073-2018, https://doi.org/10.5194/acp-18-11073-2018, 2018
Short summary
Short summary
Exhaust emissions from a light-duty diesel engine were introduced into an atmospheric simulation chamber which was used as a holding-cell for sampling, allowing instruments capable of providing detailed chemical speciation of exhaust gas emissions to be used. The effect of different engine conditions on the exhaust gas composition was investigated. The exhaust composition changed considerably due to two influencing factors, engine combustion and diesel oxidative catalyst efficiency.
Michael Le Breton, Yujue Wang, Åsa M. Hallquist, Ravi Kant Pathak, Jing Zheng, Yudong Yang, Dongjie Shang, Marianne Glasius, Thomas J. Bannan, Qianyun Liu, Chak K. Chan, Carl J. Percival, Wenfei Zhu, Shengrong Lou, David Topping, Yuchen Wang, Jianzhen Yu, Keding Lu, Song Guo, Min Hu, and Mattias Hallquist
Atmos. Chem. Phys., 18, 10355–10371, https://doi.org/10.5194/acp-18-10355-2018, https://doi.org/10.5194/acp-18-10355-2018, 2018
Short summary
Short summary
This paper utilizes a chemical ionisation mass spectrometer measuring gas and particle-phase organosulfates (OS) simultaneously during a field campaign in Beijing, China, and highlights how high time frequency online measurements enable a detailed analysis of dominant production mechanisms. We find that high aerosol acidity, organic precursor concentration and relative humidity promote the production of OS. The thermogram desorption reveals the potential for semi-volatile gas-phase OS.
Wiebke Frey, Dawei Hu, James Dorsey, M. Rami Alfarra, Aki Pajunoja, Annele Virtanen, Paul Connolly, and Gordon McFiggans
Atmos. Chem. Phys., 18, 9393–9409, https://doi.org/10.5194/acp-18-9393-2018, https://doi.org/10.5194/acp-18-9393-2018, 2018
Short summary
Short summary
The coupled system of the Manchester Aerosol Chamber and Manchester Ice Cloud Chamber was used to study the ice-forming abilities of secondary
organic aerosol particles under mixed-phase cloud conditions. Given the vast abundance of secondary organic particles in the atmosphere, they
might present an important contribution to ice-nucleating particles. However, we find that in the studied temperature range (20 to 28 °C)
the secondary organic particles do not nucleate ice particles.
Emma L. Simpson, Paul J. Connolly, and Gordon McFiggans
Atmos. Chem. Phys., 18, 7237–7250, https://doi.org/10.5194/acp-18-7237-2018, https://doi.org/10.5194/acp-18-7237-2018, 2018
Short summary
Short summary
This study explores the process of ice formation in clouds by conducting computer model simulations and laboratory experiments in a cloud chamber. We show that the formation of ice in clouds can be limited by the presence of atmospheric aerosol particles and that further research is required to identify the requirements for freezing, e.g. minimum mass of water, in order to accurately calculate ice formation and thus improve climate and weather prediction.
Stefano Decesari, Simona Kovarich, Manuela Pavan, Arianna Bassan, Andrea Ciacci, and David Topping
Atmos. Chem. Phys., 18, 2329–2340, https://doi.org/10.5194/acp-18-2329-2018, https://doi.org/10.5194/acp-18-2329-2018, 2018
Short summary
Short summary
Particulate matter (PM) chemical composition includes thousands of individual organic compounds that have never been tested for their toxicological potential. Computational (in silico) screenings represent a promising approach to identify new target compounds for more in-depth toxicological analyses. We provide here a proof-of-concept evaluation based on ca. 100 aerosol organic compounds. Reliable toxicological predictions were obtained for more than 80 % of them.
Kathryn Fowler, Paul J. Connolly, David O. Topping, and Simon O'Meara
Atmos. Chem. Phys., 18, 1629–1642, https://doi.org/10.5194/acp-18-1629-2018, https://doi.org/10.5194/acp-18-1629-2018, 2018
Short summary
Short summary
This is the first time the Maxwell–Stefan framework has been applied to an atmospheric aerosol core–shell model and shows that there is a complex interplay between the viscous and solubility effects on aerosol composition. Understanding aerosol composition is essential to accurately model their interactions within atmospheric systems. We use simple binary systems to demonstrate how viscosity and solubility both play a role in affecting the rate of diffusion through aerosol particles.
Ulrich K. Krieger, Franziska Siegrist, Claudia Marcolli, Eva U. Emanuelsson, Freya M. Gøbel, Merete Bilde, Aleksandra Marsh, Jonathan P. Reid, Andrew J. Huisman, Ilona Riipinen, Noora Hyttinen, Nanna Myllys, Theo Kurtén, Thomas Bannan, Carl J. Percival, and David Topping
Atmos. Meas. Tech., 11, 49–63, https://doi.org/10.5194/amt-11-49-2018, https://doi.org/10.5194/amt-11-49-2018, 2018
Short summary
Short summary
Vapor pressures of low-volatility organic molecules at atmospheric temperatures reported in the literature often differ by several orders of magnitude between measurement techniques. These discrepancies exceed the stated uncertainty of each technique, which is generally reported to be smaller than a factor of 2. We determined saturation vapor pressures for the homologous series of polyethylene glycols ranging in vapor pressure at 298 K from 1E−7 Pa to 5E−2 Pa as a reference set.
Simon O'Meara, David O. Topping, Rahul A. Zaveri, and Gordon McFiggans
Atmos. Chem. Phys., 17, 10477–10494, https://doi.org/10.5194/acp-17-10477-2017, https://doi.org/10.5194/acp-17-10477-2017, 2017
Short summary
Short summary
To simulate particle-phase diffusion, an analytical expression is desired because it takes less calculation time than a differential equation. Here a correction is found for the analytical solution for when diffusivity is dependent on composition, thereby making it more widely applicable than before. Consequently, we are able to more realistically evaluate the rate limitation (if any) imposed by particle-phase diffusion on component partitioning between the gas and particle phase.
David O. Topping, James Allan, M. Rami Alfarra, and Bernard Aumont
Geosci. Model Dev., 10, 2365–2377, https://doi.org/10.5194/gmd-10-2365-2017, https://doi.org/10.5194/gmd-10-2365-2017, 2017
Short summary
Short summary
Our ability to model the chemical and thermodynamic processes that lead to secondary organic aerosol (SOA) formation is thought to be hampered by the complexity of the system. In this proof of concept study, the ability to train supervised methods to predict electron impact ionisation (EI) mass spectra for the AMS is evaluated to facilitate improved model evaluation. The study demonstrates the use of a methodology that would be improved with more training data and data from simple mixed systems.
Huan Yao, Yu Song, Mingxu Liu, Scott Archer-Nicholls, Douglas Lowe, Gordon McFiggans, Tingting Xu, Pin Du, Jianfeng Li, Yusheng Wu, Min Hu, Chun Zhao, and Tong Zhu
Atmos. Chem. Phys., 17, 5205–5219, https://doi.org/10.5194/acp-17-5205-2017, https://doi.org/10.5194/acp-17-5205-2017, 2017
Simon Ruske, David O. Topping, Virginia E. Foot, Paul H. Kaye, Warren R. Stanley, Ian Crawford, Andrew P. Morse, and Martin W. Gallagher
Atmos. Meas. Tech., 10, 695–708, https://doi.org/10.5194/amt-10-695-2017, https://doi.org/10.5194/amt-10-695-2017, 2017
Short summary
Short summary
Particles such as bacteria, pollen and fungal spores have important implications within the environment and public health sectors. Here we evaluate the performance of various different methods for distinguishing between these different types of particles using a new instrument. We demonstrate that there may be better alternatives to the currently used methods which can be further investigated in future research.
François Benduhn, Graham W. Mann, Kirsty J. Pringle, David O. Topping, Gordon McFiggans, and Kenneth S. Carslaw
Geosci. Model Dev., 9, 3875–3906, https://doi.org/10.5194/gmd-9-3875-2016, https://doi.org/10.5194/gmd-9-3875-2016, 2016
Short summary
Short summary
We present a new mathematical formalism that serves to represent exchanges of inorganic matter between the atmosphere gas phase and the aerosol aqueous phase. In a global modelling framework, taking into account these processes may help represent many important features more accurately, such as the formation of cloud droplets or the radiative properties of the atmosphere. The formalism strives to keep an appropriate balance between accuracy and computation efficiency requirements.
Matthew Crooks, Paul Connolly, David Topping, and Gordon McFiggans
Geosci. Model Dev., 9, 3617–3637, https://doi.org/10.5194/gmd-9-3617-2016, https://doi.org/10.5194/gmd-9-3617-2016, 2016
Short summary
Short summary
Semi-volatile compounds, like water, can exist in both vapour phases and condensed phases within a system. This paper presents a method of calculating the condensed and vapour phases of semi-volatile compounds at equilibrium, in particular, when the condensed mass occurs within particles of different sizes and chemical composition. The applications of interest to the authors are those of atmospheric importance such as cloud droplet formation and reflection or absorption of solar radiation.
Samuel Lowe, Daniel G. Partridge, David Topping, and Philip Stier
Atmos. Chem. Phys., 16, 10941–10963, https://doi.org/10.5194/acp-16-10941-2016, https://doi.org/10.5194/acp-16-10941-2016, 2016
Short summary
Short summary
A novel inverse modelling framework is developed for analysing the sensitivity of cloud condensation nuclei (CCN) concentrations to simultaneous perturbations in multiple model parameters at atmospherically relevant humidities. Many parameter interactions are identified and CCN concentrations are found to be relatively insensitive to bulk–surface partitioning, while aerosol concentration, surface tension, composition and solution ideality exhibit a higher degree of sensitivity.
James D. Whitehead, Eoghan Darbyshire, Joel Brito, Henrique M. J. Barbosa, Ian Crawford, Rafael Stern, Martin W. Gallagher, Paul H. Kaye, James D. Allan, Hugh Coe, Paulo Artaxo, and Gordon McFiggans
Atmos. Chem. Phys., 16, 9727–9743, https://doi.org/10.5194/acp-16-9727-2016, https://doi.org/10.5194/acp-16-9727-2016, 2016
Short summary
Short summary
We present measurements of aerosols during the transition from wet to dry seasons at a pristine rainforest site in central Amazonia. By excluding pollution episodes, we focus on natural biogenic aerosols. Submicron aerosols are dominated by organic material, similar to previous wet season measurements. Larger particles are dominated by biological material, mostly fungal spores, with higher concentrations at night. This study provides important data on the nature of particles above the Amazon.
Scott Archer-Nicholls, Douglas Lowe, David M. Schultz, and Gordon McFiggans
Atmos. Chem. Phys., 16, 5573–5594, https://doi.org/10.5194/acp-16-5573-2016, https://doi.org/10.5194/acp-16-5573-2016, 2016
Short summary
Short summary
The response of the Weather Research and Forecasting model with Chemistry to forcings by biomass burning aerosol were investigated in high-resolution nested domains over Brazil. The aerosol-layer was found to have a negative direct effect at the top of the atmosphere, but this was largely cancelled by a semi-direct effect which inhibited afternoon cloud formation. The cloud response to the aerosol was found to be highly sensitive to model resolution and the use of convective parameterisation.
Simon O'Meara, David O. Topping, and Gordon McFiggans
Atmos. Chem. Phys., 16, 5299–5313, https://doi.org/10.5194/acp-16-5299-2016, https://doi.org/10.5194/acp-16-5299-2016, 2016
Short summary
Short summary
To understand the effect of atmospheric particulate matter on climate and human health we need to know how it evolves. We investigate how best to estimate diffusion of components through particles by comparing diffusion times from three approaches to solving Fick's Law and find that they agree. This means that scientists can simulate Fickian diffusion through atmospheric particles using the approach best suited to their requirements and have confidence that their model is mathematically sound.
David Topping, Mark Barley, Michael K. Bane, Nicholas Higham, Bernard Aumont, Nicholas Dingle, and Gordon McFiggans
Geosci. Model Dev., 9, 899–914, https://doi.org/10.5194/gmd-9-899-2016, https://doi.org/10.5194/gmd-9-899-2016, 2016
Short summary
Short summary
In this paper we describe the development and application of a new web-based and open-source facility, UManSysProp (http://umansysprop .seaes.manchester.ac.uk), for automating predictions of molecular and atmospheric aerosol properties. Current facilities include pure component vapour pressures, critical properties, and sub-cooled densities of organic molecules; activity coefficient predictions for mixed inorganic-organic liquid systems; hygroscopic growth factors and CCN activation potential.
I. Crawford, S. Ruske, D. O. Topping, and M. W. Gallagher
Atmos. Meas. Tech., 8, 4979–4991, https://doi.org/10.5194/amt-8-4979-2015, https://doi.org/10.5194/amt-8-4979-2015, 2015
Short summary
Short summary
HCA analysis methods were evaluated for the purpose of identifying primary biological aerosol sampled with a WIBS. The ward linkage with z-score normalisation could discriminate between five test particles with 98% accuracy. We applied these methods to a previously studied ambient data set, where both methods produced similar results with some minor differences in cluster partitioning. Finally we compared to previous approaches and found our new method offered improved quantification of PBA.
M. Paramonov, V.-M. Kerminen, M. Gysel, P. P. Aalto, M. O. Andreae, E. Asmi, U. Baltensperger, A. Bougiatioti, D. Brus, G. P. Frank, N. Good, S. S. Gunthe, L. Hao, M. Irwin, A. Jaatinen, Z. Jurányi, S. M. King, A. Kortelainen, A. Kristensson, H. Lihavainen, M. Kulmala, U. Lohmann, S. T. Martin, G. McFiggans, N. Mihalopoulos, A. Nenes, C. D. O'Dowd, J. Ovadnevaite, T. Petäjä, U. Pöschl, G. C. Roberts, D. Rose, B. Svenningsson, E. Swietlicki, E. Weingartner, J. Whitehead, A. Wiedensohler, C. Wittbom, and B. Sierau
Atmos. Chem. Phys., 15, 12211–12229, https://doi.org/10.5194/acp-15-12211-2015, https://doi.org/10.5194/acp-15-12211-2015, 2015
Short summary
Short summary
The research paper presents the first comprehensive overview of field measurements with the CCN Counter performed at a large number of locations around the world within the EUCAARI framework. The paper sheds light on the CCN number concentrations and activated fractions around the world and their dependence on the water vapour supersaturation ratio, the dependence of aerosol hygroscopicity on particle size, and seasonal and diurnal variation of CCN activation and hygroscopic properties.
K. P. Wyche, P. S. Monks, K. L. Smallbone, J. F. Hamilton, M. R. Alfarra, A. R. Rickard, G. B. McFiggans, M. E. Jenkin, W. J. Bloss, A. C. Ryan, C. N. Hewitt, and A. R. MacKenzie
Atmos. Chem. Phys., 15, 8077–8100, https://doi.org/10.5194/acp-15-8077-2015, https://doi.org/10.5194/acp-15-8077-2015, 2015
Short summary
Short summary
This paper describes a new ensemble methodology for the statistical analysis of atmospheric gas- & particle-phase composition data sets. The methodology reduces the huge amount of data derived from many chamber experiments to show that organic reactivity & resultant particle formation can be mapped into unique clusters in statistical space. The model generated is used to map more realistic plant mesocosm oxidation data, the projection of which gives insight into reactive pathways & precursors.
J. D. Allan, P. I. Williams, J. Najera, J. D. Whitehead, M. J. Flynn, J. W. Taylor, D. Liu, E. Darbyshire, L. J. Carpenter, R. Chance, S. J. Andrews, S. C. Hackenberg, and G. McFiggans
Atmos. Chem. Phys., 15, 5599–5609, https://doi.org/10.5194/acp-15-5599-2015, https://doi.org/10.5194/acp-15-5599-2015, 2015
Short summary
Short summary
New particle formation (NPF) is an important contributor to aerosol number concentrations in the Arctic and thus has a major role in dictating cloud properties and climate in this region. Here we present direct evidence that the oxidation of iodine in the atmosphere causes NPF in the Greenland Sea. This is important because this is a NPF mechanism that has not previously been considered in modelling studies at these latitudes.
M. D. Jolleys, H. Coe, G. McFiggans, J. W. Taylor, S. J. O'Shea, M. Le Breton, S. J.-B. Bauguitte, S. Moller, P. Di Carlo, E. Aruffo, P. I. Palmer, J. D. Lee, C. J. Percival, and M. W. Gallagher
Atmos. Chem. Phys., 15, 3077–3095, https://doi.org/10.5194/acp-15-3077-2015, https://doi.org/10.5194/acp-15-3077-2015, 2015
Short summary
Short summary
Particulate emissions in the form of organic aerosol from boreal forest fires in Canada have been measured during an aircraft measurement campaign. Ratios of the amount of aerosol emitted relative to gas species such as CO were calculated and show high levels of variability throughout the campaign. This variability is affected by both changes in fire conditions, as fires tended to die down later in the measurement period, and by changes to the aerosol due to chemical reactions in the atmosphere.
S. Archer-Nicholls, D. Lowe, E. Darbyshire, W. T. Morgan, M. M. Bela, G. Pereira, J. Trembath, J. W. Kaiser, K. M. Longo, S. R. Freitas, H. Coe, and G. McFiggans
Geosci. Model Dev., 8, 549–577, https://doi.org/10.5194/gmd-8-549-2015, https://doi.org/10.5194/gmd-8-549-2015, 2015
Short summary
Short summary
The regional WRF-Chem model was used to study aerosol particles from biomass burning in South America. The modelled estimates of fire plume injection heights were found to be too high, with serious implications for modelled aerosol vertical distribution, transport and impacts on local climate. A modified emission scenario was developed which improved the predicted injection height. Model results were compared and evaluated against in situ measurements from the 2012 SAMBBA flight campaign.
D. Lowe, S. Archer-Nicholls, W. Morgan, J. Allan, S. Utembe, B. Ouyang, E. Aruffo, M. Le Breton, R. A. Zaveri, P. Di Carlo, C. Percival, H. Coe, R. Jones, and G. McFiggans
Atmos. Chem. Phys., 15, 1385–1409, https://doi.org/10.5194/acp-15-1385-2015, https://doi.org/10.5194/acp-15-1385-2015, 2015
W. T. Morgan, B. Ouyang, J. D. Allan, E. Aruffo, P. Di Carlo, O. J. Kennedy, D. Lowe, M. J. Flynn, P. D. Rosenberg, P. I. Williams, R. Jones, G. B. McFiggans, and H. Coe
Atmos. Chem. Phys., 15, 973–990, https://doi.org/10.5194/acp-15-973-2015, https://doi.org/10.5194/acp-15-973-2015, 2015
Short summary
Short summary
This paper used observations from a research aircraft flying around the UK to investigate how air pollution in north-western Europe can alter nighttime chemical reactions in the atmosphere. These chemical reactions can worsen air quality in the region, as well as influence regional climate change. Ammonium nitrate aerosol appears to play an important role. The paper indicates that representation of these chemical reactions is poorly represented in models used for air quality and climate.
K. P. Wyche, A. C. Ryan, C. N. Hewitt, M. R. Alfarra, G. McFiggans, T. Carr, P. S. Monks, K. L. Smallbone, G. Capes, J. F. Hamilton, T. A. M. Pugh, and A. R. MacKenzie
Atmos. Chem. Phys., 14, 12781–12801, https://doi.org/10.5194/acp-14-12781-2014, https://doi.org/10.5194/acp-14-12781-2014, 2014
J. D. Whitehead, M. Irwin, J. D. Allan, N. Good, and G. McFiggans
Atmos. Chem. Phys., 14, 11833–11841, https://doi.org/10.5194/acp-14-11833-2014, https://doi.org/10.5194/acp-14-11833-2014, 2014
Short summary
Short summary
Water uptake of ambient particles was measured by 2 independent techniques at a wide range of locations between 2007 and 2013. The agreement between the techniques was mixed and hence the number of potential cloud seeds calculated from the measurements frequently showed discrepancies. Whilst there is sensitivity to how well we measure the size of the particles, much of the difference depends on how the particles behave when exposed to moisture in the different techniques (and in the atmosphere).
S. Archer-Nicholls, D. Lowe, S. Utembe, J. Allan, R. A. Zaveri, J. D. Fast, Ø. Hodnebrog, H. Denier van der Gon, and G. McFiggans
Geosci. Model Dev., 7, 2557–2579, https://doi.org/10.5194/gmd-7-2557-2014, https://doi.org/10.5194/gmd-7-2557-2014, 2014
M. J. Lawler, J. Whitehead, C. O'Dowd, C. Monahan, G. McFiggans, and J. N. Smith
Atmos. Chem. Phys., 14, 11557–11569, https://doi.org/10.5194/acp-14-11557-2014, https://doi.org/10.5194/acp-14-11557-2014, 2014
Short summary
Short summary
This work describes the chemical and physical characterization of very small (< 100 nm diameter) particles in the marine atmosphere. We show that sea salt is present even at very small sizes and present evidence that organic species are important contributors to apparent new particle formation events over the ocean.
E. Simpson, P. Connolly, and G. McFiggans
Geosci. Model Dev., 7, 1535–1542, https://doi.org/10.5194/gmd-7-1535-2014, https://doi.org/10.5194/gmd-7-1535-2014, 2014
M. Crippa, F. Canonaco, V. A. Lanz, M. Äijälä, J. D. Allan, S. Carbone, G. Capes, D. Ceburnis, M. Dall'Osto, D. A. Day, P. F. DeCarlo, M. Ehn, A. Eriksson, E. Freney, L. Hildebrandt Ruiz, R. Hillamo, J. L. Jimenez, H. Junninen, A. Kiendler-Scharr, A.-M. Kortelainen, M. Kulmala, A. Laaksonen, A. A. Mensah, C. Mohr, E. Nemitz, C. O'Dowd, J. Ovadnevaite, S. N. Pandis, T. Petäjä, L. Poulain, S. Saarikoski, K. Sellegri, E. Swietlicki, P. Tiitta, D. R. Worsnop, U. Baltensperger, and A. S. H. Prévôt
Atmos. Chem. Phys., 14, 6159–6176, https://doi.org/10.5194/acp-14-6159-2014, https://doi.org/10.5194/acp-14-6159-2014, 2014
P. J. Connolly, D. O. Topping, F. Malavelle, and G. McFiggans
Atmos. Chem. Phys., 14, 2289–2302, https://doi.org/10.5194/acp-14-2289-2014, https://doi.org/10.5194/acp-14-2289-2014, 2014
M. R. Alfarra, N. Good, K. P. Wyche, J. F. Hamilton, P. S. Monks, A. C. Lewis, and G. McFiggans
Atmos. Chem. Phys., 13, 11769–11789, https://doi.org/10.5194/acp-13-11769-2013, https://doi.org/10.5194/acp-13-11769-2013, 2013
J. F. Hamilton, M. R. Alfarra, N. Robinson, M. W. Ward, A. C. Lewis, G. B. McFiggans, H. Coe, and J. D. Allan
Atmos. Chem. Phys., 13, 11295–11305, https://doi.org/10.5194/acp-13-11295-2013, https://doi.org/10.5194/acp-13-11295-2013, 2013
D. Liu, J. Allan, J. Whitehead, D. Young, M. Flynn, H. Coe, G. McFiggans, Z. L. Fleming, and B. Bandy
Atmos. Chem. Phys., 13, 2015–2029, https://doi.org/10.5194/acp-13-2015-2013, https://doi.org/10.5194/acp-13-2015-2013, 2013
Related subject area
Atmospheric sciences
Effects of vertical grid spacing on the climate simulated in the ICON-Sapphire global storm-resolving model
Development of the tangent linear and adjoint models of the global online chemical transport model MPAS-CO2 v7.3
Impacts of updated reaction kinetics on the global GEOS-Chem simulation of atmospheric chemistry
Spatial spin-up of precipitation in limited-area convection-permitting simulations over North America using the CRCM6/GEM5.0 model
Sensitivity of atmospheric rivers to aerosol treatment in regional climate simulations: insights from the AIRA identification algorithm
The implementation of dust mineralogy in COSMO5.05-MUSCAT
Implementation of the ISORROPIA-lite aerosol thermodynamics model into the EMAC chemistry climate model (based on MESSy v2.55): implications for aerosol composition and acidity
Evaluation of surface shortwave downward radiation forecasts by the numerical weather prediction model AROME
GEO4PALM v1.1: an open-source geospatial data processing toolkit for the PALM model system
Modeling collision–coalescence in particle microphysics: numerical convergence of mean and variance of precipitation in cloud simulations using the University of Warsaw Lagrangian Cloud Model (UWLCM) 2.1
Modeling below-cloud scavenging of size-resolved particles in GEM-MACHv3.1
Impacts of a double-moment bulk cloud microphysics scheme (NDW6-G23) on aerosol fields in NICAM.19 with a global 14 km grid resolution
Sensitivity of air quality model responses to emission changes: comparison of results based on four EU inventories through FAIRMODE benchmarking methodology
A simple and realistic aerosol emission approach for use in the Thompson–Eidhammer microphysics scheme in the NOAA UFS Weather Model (version GSL global-24Feb2022)
On the formation of biogenic secondary organic aerosol in chemical transport models: an evaluation of the WRF-CHIMERE (v2020r2) model with a focus over the Finnish boreal forest
The first application of a numerically exact, higher-order sensitivity analysis approach for atmospheric modelling: implementation of the hyperdual-step method in the Community Multiscale Air Quality Model (CMAQ) version 5.3.2
GAN-argcPredNet v2.0: a radar echo extrapolation model based on spatiotemporal process enhancement
Analysis of the GEFS-Aerosols annual budget to better understand aerosol predictions simulated in the model
A model for rapid PM2.5 exposure estimates in wildfire conditions using routinely available data: rapidfire v0.1.3
BoundaryLayerDynamics.jl v1.0: a modern codebase for atmospheric boundary-layer simulations
The wave-age-dependent stress parameterisation (WASP) for momentum and heat turbulent fluxes at sea in SURFEX v8.1
Spherical air mass factors in one and two dimensions with SASKTRAN 1.6.0
An improved version of the piecewise parabolic method advection scheme: description and performance assessment in a bidimensional test case with stiff chemistry in toyCTM v1.0.1
INCHEM-Py v1.2: a community box model for indoor air chemistry
Implementation and evaluation of updated photolysis rates in the EMEP MSC-W chemistry-transport model using Cloud-J v7.3e
Representation of atmosphere-induced heterogeneity in land–atmosphere interactions in E3SM–MMFv2
A global grid model for the estimation of zenith tropospheric delay considering the variations at different altitudes
Data assimilation for the Model for Prediction Across Scales – Atmosphere with the Joint Effort for Data assimilation Integration (JEDI-MPAS 2.0.0-beta): ensemble of 3D ensemble-variational (En-3DEnVar) assimilations
A Grid Model for Vertical Correction of Precipitable Water Vapor over the Chinese Mainland and Surrounding Areas Using Random Forest
Simulations of 7Be and 10Be with the GEOS-Chem global model v14.0.2 using state-of-the-art production rates
Comprehensive evaluation of typical planetary boundary layer (PBL) parameterization schemes in China – Part 2: Influence of uncertainty factors
Advances and Prospects of Deep Learning for Medium-Range Extreme Weather Forecasting
A mountain-induced moist baroclinic wave test case for the dynamical cores of atmospheric general circulation models
The effect of emission source chemical profiles on simulated PM2.5 components: sensitivity analysis with the Community Multiscale Air Quality (CMAQ) modeling system version 5.0.2
Challenges of constructing and selecting the "perfect" initial and boundary conditions for the LES model PALM
Comprehensive evaluation of typical planetary boundary layer (PBL) parameterization schemes in China – Part 1: Understanding expressiveness of schemes for different regions from the mechanism perspective
Evaluating 3 decades of precipitation in the Upper Colorado River basin from a high-resolution regional climate model
How non-equilibrium aerosol chemistry impacts particle acidity: the GMXe AERosol CHEMistry (GMXe–AERCHEM, v1.0) sub-submodel of MESSy
Implementation of a satellite-based tool for the quantification of CH4 emissions over Europe (AUMIA v1.0) – Part 1: forward modelling evaluation against near-surface and satellite data
The capabilities of the adjoint of GEOS-Chem model to support HEMCO emission inventories and MERRA-2 meteorological data
Rapid O3 assimilations – Part 1: Background and local contributions to tropospheric O3 changes in China in 2015–2020
Description and evaluation of the new UM–UKCA (vn11.0) Double Extended Stratospheric–Tropospheric (DEST vn1.0) scheme for comprehensive modelling of halogen chemistry in the stratosphere
A robust error correction method for numerical weather prediction wind speed based on Bayesian optimization, variational mode decomposition, principal component analysis, and random forest: VMD-PCA-RF (version 1.0.0)
Description and performance of a sectional aerosol microphysical model in the Community Earth System Model (CESM2)
A simplified non-linear chemistry transport model for analyzing NO2 column observations: STILT–NOx
The Hydro-ABC model (Version 2.0): a simplified convective-scale model with moist dynamics
Rapid Adaptive Optimization Model for Atmospheric Chemistry (ROMAC) v1.0
A standardized methodology for the validation of air quality forecast applications (F-MQO): lessons learnt from its application across Europe
Application of the Multi-Scale Infrastructure for Chemistry and Aerosols version 0 (MUSICAv0) for air quality research in Africa
A Regional multi-Air Pollutant Assimilation System (RAPAS v1.0) for emission estimates: system development and application
Hauke Schmidt, Sebastian Rast, Jiawei Bao, Amrit Cassim, Shih-Wei Fang, Diego Jimenez-de la Cuesta, Paul Keil, Lukas Kluft, Clarissa Kroll, Theresa Lang, Ulrike Niemeier, Andrea Schneidereit, Andrew I. L. Williams, and Bjorn Stevens
Geosci. Model Dev., 17, 1563–1584, https://doi.org/10.5194/gmd-17-1563-2024, https://doi.org/10.5194/gmd-17-1563-2024, 2024
Short summary
Short summary
A recent development in numerical simulations of the global atmosphere is the increase in horizontal resolution to grid spacings of a few kilometers. However, the vertical grid spacing of these models has not been reduced at the same rate as the horizontal grid spacing. Here, we assess the effects of much finer vertical grid spacings, in particular the impacts on cloud quantities and the atmospheric energy balance.
Tao Zheng, Sha Feng, Jeffrey Steward, Xiaoxu Tian, David Baker, and Martin Baxter
Geosci. Model Dev., 17, 1543–1562, https://doi.org/10.5194/gmd-17-1543-2024, https://doi.org/10.5194/gmd-17-1543-2024, 2024
Short summary
Short summary
The tangent linear and adjoint models have been successfully implemented in the MPAS-CO2 system, which has undergone rigorous accuracy testing. This development lays the groundwork for a global carbon flux data assimilation system, which offers the flexibility of high-resolution focus on specific areas, while maintaining a coarser resolution elsewhere. This approach significantly reduces computational costs and is thus perfectly suited for future CO2 geostationery and imager satellites.
Kelvin H. Bates, Mathew J. Evans, Barron H. Henderson, and Daniel J. Jacob
Geosci. Model Dev., 17, 1511–1524, https://doi.org/10.5194/gmd-17-1511-2024, https://doi.org/10.5194/gmd-17-1511-2024, 2024
Short summary
Short summary
Accurate representation of rates and products of chemical reactions in atmospheric models is crucial for simulating concentrations of pollutants and climate forcers. We update the widely used GEOS-Chem atmospheric chemistry model with reaction parameters from recent compilations of experimental data and demonstrate the implications for key atmospheric chemical species. The updates decrease tropospheric CO mixing ratios and increase stratospheric nitrogen oxide mixing ratios, among other changes.
François Roberge, Alejandro Di Luca, René Laprise, Philippe Lucas-Picher, and Julie Thériault
Geosci. Model Dev., 17, 1497–1510, https://doi.org/10.5194/gmd-17-1497-2024, https://doi.org/10.5194/gmd-17-1497-2024, 2024
Short summary
Short summary
Our study addresses a challenge in dynamical downscaling using regional climate models, focusing on the lack of small-scale features near the boundaries. We introduce a method to identify this “spatial spin-up” in precipitation simulations. Results show spin-up distances up to 300 km, varying by season and driving variable. Double nesting with comprehensive variables (e.g. microphysical variables) offers advantages. Findings will help optimize simulations for better climate projections.
Eloisa Raluy-López, Juan Pedro Montávez, and Pedro Jiménez-Guerrero
Geosci. Model Dev., 17, 1469–1495, https://doi.org/10.5194/gmd-17-1469-2024, https://doi.org/10.5194/gmd-17-1469-2024, 2024
Short summary
Short summary
Atmospheric rivers (ARs) represent a significant source of water but are also related to extreme precipitation events. Here, we present a new regional-scale AR identification algorithm and apply it to three simulations that include aerosol interactions at different levels. The results show that aerosols modify the intensity and trajectory of ARs and redistribute the AR-related precipitation. Thus, the correct inclusion of aerosol effects is important in the simulation of AR behavior.
Sofía Gómez Maqueo Anaya, Dietrich Althausen, Matthias Faust, Holger Baars, Bernd Heinold, Julian Hofer, Ina Tegen, Albert Ansmann, Ronny Engelmann, Annett Skupin, Birgit Heese, and Kerstin Schepanski
Geosci. Model Dev., 17, 1271–1295, https://doi.org/10.5194/gmd-17-1271-2024, https://doi.org/10.5194/gmd-17-1271-2024, 2024
Short summary
Short summary
Mineral dust aerosol particles vary greatly in their composition depending on source region, which leads to different physicochemical properties. Most atmosphere–aerosol models consider mineral dust aerosols to be compositionally homogeneous, which ultimately increases model uncertainty. Here, we present an approach to explicitly consider the heterogeneity of the mineralogical composition for simulations of the Saharan atmospheric dust cycle with regard to dust transport towards the Atlantic.
Alexandros Milousis, Alexandra P. Tsimpidi, Holger Tost, Spyros N. Pandis, Athanasios Nenes, Astrid Kiendler-Scharr, and Vlassis A. Karydis
Geosci. Model Dev., 17, 1111–1131, https://doi.org/10.5194/gmd-17-1111-2024, https://doi.org/10.5194/gmd-17-1111-2024, 2024
Short summary
Short summary
This study aims to evaluate the newly developed ISORROPIA-lite aerosol thermodynamic module within the EMAC model and explore discrepancies in global atmospheric simulations of aerosol composition and acidity by utilizing different aerosol phase states. Even though local differences were found in regions where the RH ranged from 20 % to 60 %, on a global scale the results are similar. Therefore, ISORROPIA-lite can be a reliable and computationally effective alternative to ISORROPIA II in EMAC.
Marie-Adèle Magnaldo, Quentin Libois, Sébastien Riette, and Christine Lac
Geosci. Model Dev., 17, 1091–1109, https://doi.org/10.5194/gmd-17-1091-2024, https://doi.org/10.5194/gmd-17-1091-2024, 2024
Short summary
Short summary
With the worldwide development of the solar energy sector, the need for reliable solar radiation forecasts has significantly increased. However, meteorological models that predict, among others things, solar radiation have errors. Therefore, we wanted to know in which situtaions these errors are most significant. We found that errors mostly occur in cloudy situations, and different errors were highlighted depending on the cloud altitude. Several potential sources of errors were identified.
Dongqi Lin, Jiawei Zhang, Basit Khan, Marwan Katurji, and Laura E. Revell
Geosci. Model Dev., 17, 815–845, https://doi.org/10.5194/gmd-17-815-2024, https://doi.org/10.5194/gmd-17-815-2024, 2024
Short summary
Short summary
GEO4PALM is an open-source tool to generate static input for the Parallelized Large-Eddy Simulation (PALM) model system. Geospatial static input is essential for realistic PALM simulations. However, existing tools fail to generate PALM's geospatial static input for most regions. GEO4PALM is compatible with diverse geospatial data sources and provides access to free data sets. In addition, this paper presents two application examples, which show successful PALM simulations using GEO4PALM.
Piotr Zmijewski, Piotr Dziekan, and Hanna Pawlowska
Geosci. Model Dev., 17, 759–780, https://doi.org/10.5194/gmd-17-759-2024, https://doi.org/10.5194/gmd-17-759-2024, 2024
Short summary
Short summary
In computer simulations of clouds it is necessary to model the myriad of droplets that constitute a cloud. A popular method for this is to use so-called super-droplets (SDs), each representing many real droplets. It has remained a challenge to model collisions of SDs. We study how precipitation in a cumulus cloud depends on the number of SDs. Surprisingly, we do not find convergence in mean precipitation even for numbers of SDs much larger than typically used in simulations.
Roya Ghahreman, Wanmin Gong, Paul A. Makar, Alexandru Lupu, Amanda Cole, Kulbir Banwait, Colin Lee, and Ayodeji Akingunola
Geosci. Model Dev., 17, 685–707, https://doi.org/10.5194/gmd-17-685-2024, https://doi.org/10.5194/gmd-17-685-2024, 2024
Short summary
Short summary
The article explores the impact of different representations of below-cloud scavenging on model biases. A new scavenging scheme and precipitation-phase partitioning improve the model's performance, with better SO42- scavenging and wet deposition of NO3- and NH4+.
Daisuke Goto, Tatsuya Seiki, Kentaroh Suzuki, Hisashi Yashiro, and Toshihiko Takemura
Geosci. Model Dev., 17, 651–684, https://doi.org/10.5194/gmd-17-651-2024, https://doi.org/10.5194/gmd-17-651-2024, 2024
Short summary
Short summary
Global climate models with coarse grid sizes include uncertainties about the processes in aerosol–cloud–precipitation interactions. To reduce these uncertainties, here we performed numerical simulations using a new version of our global aerosol transport model with a finer grid size over a longer period than in our previous study. As a result, we found that the cloud microphysics module influences the aerosol distributions through both aerosol wet deposition and aerosol–cloud interactions.
Alexander de Meij, Cornelis Cuvelier, Philippe Thunis, Enrico Pisoni, and Bertrand Bessagnet
Geosci. Model Dev., 17, 587–606, https://doi.org/10.5194/gmd-17-587-2024, https://doi.org/10.5194/gmd-17-587-2024, 2024
Short summary
Short summary
In our study the robustness of the model responses to emission reductions in the EU is assessed when the emission data are changed. Our findings are particularly important to better understand the uncertainties associated to the emission inventories and how these uncertainties impact the level of accuracy of the resulting air quality modelling, which is a key for designing air quality plans. Also crucial is the choice of indicator to avoid misleading interpretations of the results.
Haiqin Li, Georg A. Grell, Ravan Ahmadov, Li Zhang, Shan Sun, Jordan Schnell, and Ning Wang
Geosci. Model Dev., 17, 607–619, https://doi.org/10.5194/gmd-17-607-2024, https://doi.org/10.5194/gmd-17-607-2024, 2024
Short summary
Short summary
We developed a simple and realistic method to provide aerosol emissions for aerosol-aware microphysics in a numerical weather forecast model. The cloud-radiation differences between the experimental (EXP) and control (CTL) experiments responded to the aerosol differences. The strong positive precipitation biases over North America and Europe from the CTL run were significantly reduced in the EXP run. This study shows that a realistic representation of aerosol emissions should be considered.
Giancarlo Ciarelli, Sara Tahvonen, Arineh Cholakian, Manuel Bettineschi, Bruno Vitali, Tuukka Petäjä, and Federico Bianchi
Geosci. Model Dev., 17, 545–565, https://doi.org/10.5194/gmd-17-545-2024, https://doi.org/10.5194/gmd-17-545-2024, 2024
Short summary
Short summary
The terrestrial ecosystem releases large quantities of biogenic gases in the Earth's Atmosphere. These gases can effectively be converted into so-called biogenic aerosol particles and, eventually, affect the Earth's climate. Climate prediction varies greatly depending on how these processes are represented in model simulations. In this study, we present a detailed model evaluation analysis aimed at understanding the main source of uncertainty in predicting the formation of biogenic aerosols.
Jiachen Liu, Eric Chen, and Shannon L. Capps
Geosci. Model Dev., 17, 567–585, https://doi.org/10.5194/gmd-17-567-2024, https://doi.org/10.5194/gmd-17-567-2024, 2024
Short summary
Short summary
Air pollution harms human life and ecosystems, but its sources are complex. Scientists and policy makers use air pollution models to advance knowledge and inform control strategies. We implemented a recently developed numeral system to relate any set of model inputs, like pollutant emissions from a given activity, to all model outputs, like concentrations of pollutants harming human health. This approach will be straightforward to update when scientists discover new processes in the atmosphere.
Kun Zheng, Qiya Tan, Huihua Ruan, Jinbiao Zhang, Cong Luo, Siyu Tang, Yunlei Yi, Yugang Tian, and Jianmei Cheng
Geosci. Model Dev., 17, 399–413, https://doi.org/10.5194/gmd-17-399-2024, https://doi.org/10.5194/gmd-17-399-2024, 2024
Short summary
Short summary
Radar echo extrapolation is the common method in precipitation nowcasting. Deep learning has potential in extrapolation. However, the existing models have low prediction accuracy for heavy rainfall. In this study, the prediction accuracy is improved by suppressing the blurring effect of rain distribution and reducing the negative bias. The results show that our model has better performance, which is useful for urban operation and flood prevention.
Li Pan, Partha S. Bhattacharjee, Li Zhang, Raffaele Montuoro, Barry Baker, Jeff McQueen, Georg A. Grell, Stuart A. McKeen, Shobha Kondragunta, Xiaoyang Zhang, Gregory J. Frost, Fanglin Yang, and Ivanka Stajner
Geosci. Model Dev., 17, 431–447, https://doi.org/10.5194/gmd-17-431-2024, https://doi.org/10.5194/gmd-17-431-2024, 2024
Short summary
Short summary
A GEFS-Aerosols simulation was conducted from 1 September 2019 to 30 September 2020 to evaluate the model performance of GEFS-Aerosols. The purpose of this study was to understand how aerosol chemical and physical processes affect ambient aerosol concentrations by placing aerosol wet deposition, dry deposition, reactions, gravitational deposition, and emissions into the aerosol mass balance equation.
Sean Raffuse, Susan O'Neill, and Rebecca Schmidt
Geosci. Model Dev., 17, 381–397, https://doi.org/10.5194/gmd-17-381-2024, https://doi.org/10.5194/gmd-17-381-2024, 2024
Short summary
Short summary
Large wildfires are increasing throughout the western United States, and wildfire smoke is hazardous to public health. We developed a suite of tools called rapidfire for estimating particle pollution during wildfires using routinely available data sets. rapidfire uses official air monitoring, satellite data, meteorology, smoke modeling, and low-cost sensors. Estimates from rapidfire compare well with ground monitors and are being used in public health studies across California.
Manuel F. Schmid, Marco G. Giometto, Gregory A. Lawrence, and Marc B. Parlange
Geosci. Model Dev., 17, 321–333, https://doi.org/10.5194/gmd-17-321-2024, https://doi.org/10.5194/gmd-17-321-2024, 2024
Short summary
Short summary
Turbulence-resolving flow models have strict performance requirements, as simulations often run for weeks using hundreds of processes. Many flow scenarios also require the flexibility to modify physical and numerical models for problem-specific requirements. With a new code written in Julia we hope to make such adaptations easier without compromising on performance. In this paper we discuss the modeling approach and present validation and performance results.
Marie-Noëlle Bouin, Cindy Lebeaupin Brossier, Sylvie Malardel, Aurore Voldoire, and César Sauvage
Geosci. Model Dev., 17, 117–141, https://doi.org/10.5194/gmd-17-117-2024, https://doi.org/10.5194/gmd-17-117-2024, 2024
Short summary
Short summary
In numerical models, the turbulent exchanges of heat and momentum at the air–sea interface are not represented explicitly but with parameterisations depending on the surface parameters. A new parameterisation of turbulent fluxes (WASP) has been implemented in the surface model SURFEX v8.1 and validated on four case studies. It combines a close fit to observations including cyclonic winds, a dependency on the wave growth rate, and the possibility of being used in atmosphere–wave coupled models.
Lukas Fehr, Chris McLinden, Debora Griffin, Daniel Zawada, Doug Degenstein, and Adam Bourassa
Geosci. Model Dev., 16, 7491–7507, https://doi.org/10.5194/gmd-16-7491-2023, https://doi.org/10.5194/gmd-16-7491-2023, 2023
Short summary
Short summary
This work highlights upgrades to SASKTRAN, a model that simulates sunlight interacting with the atmosphere to help measure trace gases. The upgrades were verified by detailed comparisons between different numerical methods. A case study was performed using SASKTRAN’s multidimensional capabilities, which found that ignoring horizontal variation in the atmosphere (a common practice in the field) can introduce non-negligible errors where there is snow or high pollution.
Sylvain Mailler, Romain Pennel, Laurent Menut, and Arineh Cholakian
Geosci. Model Dev., 16, 7509–7526, https://doi.org/10.5194/gmd-16-7509-2023, https://doi.org/10.5194/gmd-16-7509-2023, 2023
Short summary
Short summary
We show that a new advection scheme named PPM + W (piecewise parabolic method + Walcek) offers geoscientific modellers an alternative, high-performance scheme designed for Cartesian-grid advection, with improved performance over the classical PPM scheme. The computational cost of PPM + W is not higher than that of PPM. With improved accuracy and controlled computational cost, this new scheme may find applications in chemistry-transport models, ocean models or atmospheric circulation models.
David R. Shaw, Toby J. Carter, Helen L. Davies, Ellen Harding-Smith, Elliott C. Crocker, Georgia Beel, Zixu Wang, and Nicola Carslaw
Geosci. Model Dev., 16, 7411–7431, https://doi.org/10.5194/gmd-16-7411-2023, https://doi.org/10.5194/gmd-16-7411-2023, 2023
Short summary
Short summary
Exposure to air pollution is one of the greatest risks to human health, and it is indoors, where we spend upwards of 90 % of our time, that our exposure is greatest. The INdoor CHEMical model in Python (INCHEM-Py) is a new, community-led box model that tracks the evolution and fate of atmospheric chemical pollutants indoors. We have shown the processes simulated by INCHEM-Py, its ability to model experimental data and how it may be used to develop further understanding of indoor air chemistry.
Willem E. van Caspel, David Simpson, Jan Eiof Jonson, Anna M. K. Benedictow, Yao Ge, Alcide di Sarra, Giandomenico Pace, Massimo Vieno, Hannah L. Walker, and Mathew R. Heal
Geosci. Model Dev., 16, 7433–7459, https://doi.org/10.5194/gmd-16-7433-2023, https://doi.org/10.5194/gmd-16-7433-2023, 2023
Short summary
Short summary
Radiation coming from the sun is essential to atmospheric chemistry, driving the breakup, or photodissociation, of atmospheric molecules. This in turn affects the chemical composition and reactivity of the atmosphere. The representation of photodissociation effects is therefore essential in atmospheric chemistry modeling. One such model is the EMEP MSC-W model, for which a new way of calculating the photodissociation rates is tested and evaluated in this paper.
Jungmin Lee, Walter M. Hannah, and David C. Bader
Geosci. Model Dev., 16, 7275–7287, https://doi.org/10.5194/gmd-16-7275-2023, https://doi.org/10.5194/gmd-16-7275-2023, 2023
Short summary
Short summary
Representing accurate land–atmosphere interaction processes is overlooked in weather and climate models. In this study, we propose three methods to represent land–atmosphere coupling in the Energy Exascale Earth System Model (E3SM) with the Multi-scale Modeling Framework (MMF) approach. In this study, we introduce spatially homogeneous and heterogeneous land–atmosphere interaction processes within the cloud-resolving model domain. Our 5-year simulations reveal only small differences.
Liangke Huang, Shengwei Lan, Ge Zhu, Fade Chen, Junyu Li, and Lilong Liu
Geosci. Model Dev., 16, 7223–7235, https://doi.org/10.5194/gmd-16-7223-2023, https://doi.org/10.5194/gmd-16-7223-2023, 2023
Short summary
Short summary
The existing zenith tropospheric delay (ZTD) models have limitations such as using a single fitting function, neglecting daily cycle variations, and relying on only one resolution grid data point for modeling. This model considers the daily cycle variation and latitude factor of ZTD, using the sliding window algorithm based on ERA5 atmospheric reanalysis data. The ZTD data from 545 radiosonde stations and MERRA-2 atmospheric reanalysis data are used to validate the accuracy of the GGZTD-P model.
Jonathan J. Guerrette, Zhiquan Liu, Chris Snyder, Byoung-Joo Jung, Craig S. Schwartz, Junmei Ban, Steven Vahl, Yali Wu, Ivette Hernández Baños, Yonggang G. Yu, Soyoung Ha, Yannick Trémolet, Thomas Auligné, Clementine Gas, Benjamin Ménétrier, Anna Shlyaeva, Mark Miesch, Stephen Herbener, Emily Liu, Daniel Holdaway, and Benjamin T. Johnson
Geosci. Model Dev., 16, 7123–7142, https://doi.org/10.5194/gmd-16-7123-2023, https://doi.org/10.5194/gmd-16-7123-2023, 2023
Short summary
Short summary
We demonstrate an ensemble of variational data assimilations (EDA) with the Model for Prediction Across Scales and the Joint Effort for Data assimilation Integration (JEDI) software framework. When compared to 20-member ensemble forecasts from operational initial conditions, those from 80-member EDA-generated initial conditions improve flow-dependent error covariances and subsequent 10 d forecasts. These experiments are repeatable for any atmospheric model with a JEDI interface.
Junyu Li, Yuxin Wang, Lilong Liu, Yibin Yao, Liangke Hang, and Feijuan Li
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-201, https://doi.org/10.5194/gmd-2023-201, 2023
Revised manuscript accepted for GMD
Short summary
Short summary
In this study, we have developed a model (RF-PWV) to characterize PWV variation with altitude in the study area. The RF-PWV can significantly reduce errors in vertical correction, enhance PWV fusion product accuracy, and provide insights into PWV vertical distribution, thereby contributing to climate research.
Minjie Zheng, Hongyu Liu, Florian Adolphi, Raimund Muscheler, Zhengyao Lu, Mousong Wu, and Nønne L. Prisle
Geosci. Model Dev., 16, 7037–7057, https://doi.org/10.5194/gmd-16-7037-2023, https://doi.org/10.5194/gmd-16-7037-2023, 2023
Short summary
Short summary
The radionuclides 7Be and 10Be are useful tracers for atmospheric transport studies. Here we use the GEOS-Chem to simulate 7Be and 10Be with different production rates: the default production rate in GEOS-Chem and two from the state-of-the-art beryllium production model. We demonstrate that reduced uncertainties in the production rates can enhance the utility of 7Be and 10Be as tracers for evaluating transport and scavenging processes in global models.
Wenxing Jia, Xiaoye Zhang, Hong Wang, Yaqiang Wang, Deying Wang, Junting Zhong, Wenjie Zhang, Lei Zhang, Lifeng Guo, Yadong Lei, Jizhi Wang, Yuanqin Yang, and Yi Lin
Geosci. Model Dev., 16, 6833–6856, https://doi.org/10.5194/gmd-16-6833-2023, https://doi.org/10.5194/gmd-16-6833-2023, 2023
Short summary
Short summary
In addition to the dominant role of the PBL scheme on the results of the meteorological field, many factors in the model are influenced by large uncertainties. This study focuses on the uncertainties that influence numerical simulation results (including horizontal resolution, vertical resolution, near-surface scheme, initial and boundary conditions, underlying surface update, and update of model version), hoping to provide a reference for scholars conducting research on the model.
Leonardo Olivetti and Gabriele Messori
EGUsphere, https://doi.org/10.5194/egusphere-2023-2490, https://doi.org/10.5194/egusphere-2023-2490, 2023
Short summary
Short summary
In recent years, deep learning models have emerged as a data-driven alternative to physics-based models for medium-range weather forecasting. This article provides an overview of recent developments in the field, and explores the challenges that deep learning models face when considering extreme weather events. It argues for the need to complement current approaches with models specifically designed to handle extreme events, and proposes a foundational framework to develop such models.
Owen K. Hughes and Christiane Jablonowski
Geosci. Model Dev., 16, 6805–6831, https://doi.org/10.5194/gmd-16-6805-2023, https://doi.org/10.5194/gmd-16-6805-2023, 2023
Short summary
Short summary
Atmospheric models benefit from idealized tests that assess their accuracy in a simpler simulation. A new test with artificial mountains is developed for models on a spherical earth. The mountains trigger the development of both planetary-scale and small-scale waves. These can be analyzed in dry or moist environments, with a simple rainfall mechanism. Four atmospheric models are intercompared. This sheds light on the pros and cons of the model design and the impact of mountains on the flow.
Zhongwei Luo, Yan Han, Kun Hua, Yufen Zhang, Jianhui Wu, Xiaohui Bi, Qili Dai, Baoshuang Liu, Yang Chen, Xin Long, and Yinchang Feng
Geosci. Model Dev., 16, 6757–6771, https://doi.org/10.5194/gmd-16-6757-2023, https://doi.org/10.5194/gmd-16-6757-2023, 2023
Short summary
Short summary
This study explores how the variation in the source profiles adopted in chemical transport models (CTMs) impacts the simulated results of chemical components in PM2.5 based on sensitivity analysis. The impact on PM2.5 components cannot be ignored, and its influence can be transmitted and linked between components. The representativeness and timeliness of the source profile should be paid adequate attention in air quality simulation.
Jelena Radovic, Michal Belda, Jaroslav Resler, Kryštof Eben, Martin Bureš, Jan Geletič, Pavel Krč, Hynek Řezníček, and Vladimír Fuka
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2023-197, https://doi.org/10.5194/gmd-2023-197, 2023
Revised manuscript accepted for GMD
Short summary
Short summary
The initial and boundary conditions are of crucial importance for numerical model (e.g., PALM model) validation studies and have a large influence on the model results especially in the case of studying the atmosphere of a real, complex, and densely built urban environments. Our experiments with different driving conditions for the LES model PALM show its strong dependency on them which is important for the proper separation of errors coming from the boundary conditions and the model itself.
Wenxing Jia, Xiaoye Zhang, Hong Wang, Yaqiang Wang, Deying Wang, Junting Zhong, Wenjie Zhang, Lei Zhang, Lifeng Guo, Yadong Lei, Jizhi Wang, Yuanqin Yang, and Yi Lin
Geosci. Model Dev., 16, 6635–6670, https://doi.org/10.5194/gmd-16-6635-2023, https://doi.org/10.5194/gmd-16-6635-2023, 2023
Short summary
Short summary
Most current studies on planetary boundary layer (PBL) parameterization schemes are relatively fragmented and lack systematic in-depth analysis and discussion. In this study, we comprehensively evaluate the performance capability of the PBL scheme in five typical regions of China in different seasons from the mechanism of the scheme and the effects of PBL schemes on the near-surface meteorological parameters, vertical structures of the PBL, PBL height, and turbulent diffusion.
William Rudisill, Alejandro Flores, and Rosemary Carroll
Geosci. Model Dev., 16, 6531–6552, https://doi.org/10.5194/gmd-16-6531-2023, https://doi.org/10.5194/gmd-16-6531-2023, 2023
Short summary
Short summary
It is important to know how well atmospheric models do in mountains, but there are not very many weather stations. We evaluate rain and snow from a model from 1987–2020 in the Upper Colorado River basin against the available data. The model works rather well, but there are still some uncertainties in remote locations. We then use snow maps collected by aircraft, streamflow measurements, and some advanced statistics to help identify how well the model works in ways we could not do before.
Simon Rosanka, Holger Tost, Rolf Sander, Patrick Jöckel, Astrid Kerkweg, and Domenico Taraborrelli
EGUsphere, https://doi.org/10.5194/egusphere-2023-2587, https://doi.org/10.5194/egusphere-2023-2587, 2023
Short summary
Short summary
The capabilities of the Modular Earth Submodel System (MESSy) are extended to account for non-equilibrium aqueous-phase chemistry in the representation of deliquescent aerosols. When applying the new development in a global simulation we find that MESSy’s bias in modelling routinely observed inorganic aerosol mass concentrations is reduced. Furthermore, the representation of fine aerosol pH is particularly improved in the marine boundary layer.
Angel Liduvino Vara-Vela, Christoffer Karoff, Noelia Rojas Benavente, and Janaina P. Nascimento
Geosci. Model Dev., 16, 6413–6431, https://doi.org/10.5194/gmd-16-6413-2023, https://doi.org/10.5194/gmd-16-6413-2023, 2023
Short summary
Short summary
A 1-year simulation of atmospheric CH4 over Europe is performed and evaluated against observations based on the TROPOspheric Monitoring Instrument (TROPOMI). A good general model–observation agreement is found, with discrepancies reaching their minimum and maximum values during the summer peak season and winter months, respectively. A huge and under-explored potential for CH4 inverse modeling using improved TROPOMI XCH4 data sets in large-scale applications is identified.
Zhaojun Tang, Zhe Jiang, Jiaqi Chen, Panpan Yang, and Yanan Shen
Geosci. Model Dev., 16, 6377–6392, https://doi.org/10.5194/gmd-16-6377-2023, https://doi.org/10.5194/gmd-16-6377-2023, 2023
Short summary
Short summary
We designed a new framework to facilitate emission inventory updates in the adjoint of GEOS-Chem model. It allows us to support Harmonized Emissions Component (HEMCO) emission inventories conveniently and to easily add more emission inventories following future updates in GEOS-Chem forward simulations. Furthermore, we developed new modules to support MERRA-2 meteorological data; this allows us to perform long-term analysis with consistent meteorological data.
Rui Zhu, Zhaojun Tang, Xiaokang Chen, Xiong Liu, and Zhe Jiang
Geosci. Model Dev., 16, 6337–6354, https://doi.org/10.5194/gmd-16-6337-2023, https://doi.org/10.5194/gmd-16-6337-2023, 2023
Short summary
Short summary
A single ozone (O3) tracer mode was developed in this work to build the capability of the GEOS-Chem model for rapid O3 simulation. It is combined with OMI and surface O3 observations to investigate the changes in tropospheric O3 in China in 2015–2020. The assimilations indicate rapid surface O3 increases that are underestimated by the a priori simulations. We find stronger increases in tropospheric O3 columns over polluted areas and a large discrepancy by assimilating different observations.
Ewa M. Bednarz, Ryan Hossaini, N. Luke Abraham, and Martyn P. Chipperfield
Geosci. Model Dev., 16, 6187–6209, https://doi.org/10.5194/gmd-16-6187-2023, https://doi.org/10.5194/gmd-16-6187-2023, 2023
Short summary
Short summary
Development and performance of the new DEST chemistry scheme of UM–UKCA is described. The scheme extends the standard StratTrop scheme by including important updates to the halogen chemistry, thus allowing process-oriented studies of stratospheric ozone depletion and recovery, including impacts from both controlled long-lived ozone-depleting substances and emerging issues around uncontrolled, very short-lived substances. It will thus aid studies in support of future ozone assessment reports.
Shaohui Zhou, Chloe Yuchao Gao, Zexia Duan, Xingya Xi, and Yubin Li
Geosci. Model Dev., 16, 6247–6266, https://doi.org/10.5194/gmd-16-6247-2023, https://doi.org/10.5194/gmd-16-6247-2023, 2023
Short summary
Short summary
The proposed wind speed correction model (VMD-PCA-RF) demonstrates the highest prediction accuracy and stability in the five southern provinces in nearly a year and at different heights. VMD-PCA-RF evaluation indices for 13 months remain relatively stable: the forecasting accuracy rate FA is above 85 %. In future research, the proposed VMD-PCA-RF algorithm can be extrapolated to the 3 km grid points of the five southern provinces to generate a 3 km grid-corrected wind speed product.
Simone Tilmes, Michael J. Mills, Yunqian Zhu, Charles G. Bardeen, Francis Vitt, Pengfei Yu, David Fillmore, Xiaohong Liu, Brian Toon, and Terry Deshler
Geosci. Model Dev., 16, 6087–6125, https://doi.org/10.5194/gmd-16-6087-2023, https://doi.org/10.5194/gmd-16-6087-2023, 2023
Short summary
Short summary
We implemented an alternative aerosol scheme in the high- and low-top model versions of the Community Earth System Model Version 2 (CESM2) with a more detailed description of tropospheric and stratospheric aerosol size distributions than the existing aerosol model. This development enables the comparison of different aerosol schemes with different complexity in the same model framework. It identifies improvements compared to a range of observations in both the troposphere and stratosphere.
Dien Wu, Joshua L. Laughner, Junjie Liu, Paul I. Palmer, John C. Lin, and Paul O. Wennberg
Geosci. Model Dev., 16, 6161–6185, https://doi.org/10.5194/gmd-16-6161-2023, https://doi.org/10.5194/gmd-16-6161-2023, 2023
Short summary
Short summary
To balance computational expenses and chemical complexity in extracting emission signals from tropospheric NO2 columns, we propose a simplified non-linear Lagrangian chemistry transport model and assess its performance against TROPOMI v2 over power plants and cities. Using this model, we then discuss how NOx chemistry affects the relationship between NOx and CO2 emissions and how studying NO2 columns helps quantify modeled biases in wind directions and prior emissions.
Jiangshan Zhu and Ross Noel Bannister
Geosci. Model Dev., 16, 6067–6085, https://doi.org/10.5194/gmd-16-6067-2023, https://doi.org/10.5194/gmd-16-6067-2023, 2023
Short summary
Short summary
We describe how condensation and evaporation are included in the existing (otherwise dry) simplified ABC model. The new model (Hydro-ABC) includes transport of vapour and condensate within a dynamical core, and it transitions between these two phases via a micro-physics scheme. The model shows the development of an anvil cloud and excitation of atmospheric waves over many frequencies. The covariances that develop between variables are also studied together with indicators of convective motion.
Jiangyong Li, Chunlin Zhang, Wenlong Zhao, Shijie Han, Yu Wang, Hao Wang, and Boguang Wang
Geosci. Model Dev., 16, 6049–6066, https://doi.org/10.5194/gmd-16-6049-2023, https://doi.org/10.5194/gmd-16-6049-2023, 2023
Short summary
Short summary
Photochemical box models, crucial for understanding tropospheric chemistry, face challenges due to slow computational efficiency with large chemical equations. The model introduced in this study, ROMAC, boosts efficiency by up to 96 % using an advanced atmospheric solver and an adaptive optimization algorithm. Moreover, ROMAC exceeds traditional box models in evaluating the impact of physical processes on pollutant concentrations.
Lina Vitali, Kees Cuvelier, Antonio Piersanti, Alexandra Monteiro, Mario Adani, Roberta Amorati, Agnieszka Bartocha, Alessandro D'Ausilio, Paweł Durka, Carla Gama, Giulia Giovannini, Stijn Janssen, Tomasz Przybyła, Michele Stortini, Stijn Vranckx, and Philippe Thunis
Geosci. Model Dev., 16, 6029–6047, https://doi.org/10.5194/gmd-16-6029-2023, https://doi.org/10.5194/gmd-16-6029-2023, 2023
Short summary
Short summary
Air quality forecasting models play a key role in fostering short-term measures aimed at reducing human exposure to air pollution. Together with this role comes the need for a thorough assessment of the model performances to build confidence in models’ capabilities, in particular when model applications support policymaking. In this paper, we propose an evaluation methodology and test it on several domains across Europe, highlighting its strengths and room for improvement.
Wenfu Tang, Louisa K. Emmons, Helen M. Worden, Rajesh Kumar, Cenlin He, Benjamin Gaubert, Zhonghua Zheng, Simone Tilmes, Rebecca R. Buchholz, Sara-Eva Martinez-Alonso, Claire Granier, Antonin Soulie, Kathryn McKain, Bruce C. Daube, Jeff Peischl, Chelsea Thompson, and Pieternel Levelt
Geosci. Model Dev., 16, 6001–6028, https://doi.org/10.5194/gmd-16-6001-2023, https://doi.org/10.5194/gmd-16-6001-2023, 2023
Short summary
Short summary
The new MUSICAv0 model enables the study of atmospheric chemistry across all relevant scales. We develop a MUSICAv0 grid for Africa. We evaluate MUSICAv0 with observations and compare it with a previously used model – WRF-Chem. Overall, the performance of MUSICAv0 is comparable to WRF-Chem. Based on model–satellite discrepancies, we find that future field campaigns in an eastern African region (30°E–45°E, 5°S–5°N) could substantially improve the predictive skill of air quality models.
Shuzhuang Feng, Fei Jiang, Zheng Wu, Hengmao Wang, Wei He, Yang Shen, Lingyu Zhang, Yanhua Zheng, Chenxi Lou, Ziqiang Jiang, and Weimin Ju
Geosci. Model Dev., 16, 5949–5977, https://doi.org/10.5194/gmd-16-5949-2023, https://doi.org/10.5194/gmd-16-5949-2023, 2023
Short summary
Short summary
We document the system development and application of a Regional multi-Air Pollutant Assimilation System (RAPAS v1.0). This system is developed to optimize gridded source emissions of CO, SO2, NOx, primary PM2.5, and coarse PM10 on a regional scale via simultaneously assimilating surface measurements of CO, SO2, NO2, PM2.5, and PM10. A series of sensitivity experiments demonstrates the advantage of the “two-step” inversion strategy and the robustness of the system in estimating the emissions.
Cited articles
Barley, M., Topping, D., and McFiggans, G.: Critical Assessment of Liquid
Density Estimation Methods for Multifunctional Organic Compounds and Their
Use in Atmospheric Science, J. Phys. Chem. A, 117, 3428–3441,
https://doi.org/10.1021/jp304547r, 2013. a
Bertrand, A., Stefenelli, G., Pieber, S. M., Bruns, E. A., Temime-Roussel, B., Slowik, J. G., Wortham, H., Prévôt, A. S. H., El Haddad, I., and Marchand, N.: Influence of the vapor wall loss on the degradation rate constants in chamber experiments of levoglucosan and other biomass burning markers, Atmos. Chem. Phys., 18, 10915–10930, https://doi.org/10.5194/acp-18-10915-2018, 2018. a
Carslaw, N., Mota, T., Jenkin, M. E., Barley, M. H., and McFiggans, G.: A
Significant Role for Nitrate and Peroxide Groups on Indoor Secondary Organic
Aerosol, Environ. Sci. Technol., 46, 9290–9298, https://doi.org/10.1021/es301350x,
2012. a
Chen, B. T., Yeh, H. C., and Cheng, Y. S.: Evaluation of an Environmental
Reaction Chamber, Aerosol Sci. Tech., 17, 9–24,
https://doi.org/10.1080/02786829208959556, 1992. a
Crump, J. G. and Seinfeld, J. H.: Turbulent deposition and gravitational
sedimentation of an aerosol in a vessel of arbitrary shape, J. Aerosol Sci.,
12, 405–415, https://doi.org/10.1016/0021-8502(81)90036-7, 1981. a, b, c, d
Dada, L., Lehtipalo, K., Kontkanen, J., Nieminen, T., Baalbaki, R., Ahonen, L.,
Duplissy, J., Yan, C., Chu, B., Petäjä, T., Lehtinen, K., Kerminen,
V.-M., Kulmala, M., and Kangasluoma, J.: Formation and growth of sub-3-nm
aerosol particles in experimental chambers, Nat. Protoc., 15, 1013–1040,
https://doi.org/10.1038/s41596-019-0274-z, 2020. a, b
D'Ambro, E. L., Lee, B. H., Liu, J., Shilling, J. E., Gaston, C. J., Lopez-Hilfiker, F. D., Schobesberger, S., Zaveri, R. A., Mohr, C., Lutz, A., Zhang, Z., Gold, A., Surratt, J. D., Rivera-Rios, J. C., Keutsch, F. N., and Thornton, J. A.: Molecular composition and volatility of isoprene photochemical oxidation secondary organic aerosol under low- and high-NOx conditions, Atmos. Chem. Phys., 17, 159–174, https://doi.org/10.5194/acp-17-159-2017, 2017. a
Ehn, M., Thornton, J., Kleist, E., Sipilä, M., Junninen, H., Pullinen, I.,
Springer, M., Rubach, F., Tillmann, R., Lee, B., Lopez-Hilfiker, F., Andres,
S., Acir, I., Rissanen, M., Jokinen, T., Schobesberger, S., Kangasluoma, J.,
Kontkanen, J., Nieminen, T., Kurtén, T., Nielsen, L. B., Jørgensen,
S., Kjaergaard, H., Canagaratna, M., Maso, M., Berndt, T., Petäjä,
T., Wahner, A., Kerminen, V., Kulmala, M., Worsnop, D., Wildt, J., and
Mentel, T.: A large source of low-volatility secondary organic aerosol,
Nature, 506, 476–479, https://doi.org/10.1038/nature13032, 2014. a
Fry, J. L., Kiendler-Scharr, A., Rollins, A. W., Brauers, T., Brown, S. S., Dorn, H.-P., Dubé, W. P., Fuchs, H., Mensah, A., Rohrer, F., Tillmann, R., Wahner, A., Wooldridge, P. J., and Cohen, R. C.: SOA from limonene: role of NO3 in its generation and degradation, Atmos. Chem. Phys., 11, 3879–3894, https://doi.org/10.5194/acp-11-3879-2011, 2011. a, b
Fuchs, N. and Sutugin, A.: Highly dispersed aerosols, Butterworth Heinemann,
Woburn, MA, USA, 1971. a
Girolami, G. S.: A Simple “Back of the Envelope” Method for Estimating the
Densities and Molecular Volumes of Liquids and Solids, J. Chem. Educ., 71,
962–964, https://doi.org/10.1021/ed071p962, 1994. a
Hayman, G.: Effects of pollution control on UV Exposure, in: AEA Technology
Final Report, Reference AEA/RCEC/22522001/R/002 ISSUE1,
Department of Health on Contract 121/6377, AEA Technology, Oxfordshire, UK,
1997. a
Hidy, G.: Atmospheric Chemistry in a Box or a Bag, Atmosphere-Basel, 10, 7,
https://doi.org/10.3390/atmos10070401, 2019. a
Jaoui, M., Lewandowski, M., Docherty, K., Offenberg, J. H., and Kleindienst, T. E.: Atmospheric oxidation of 1,3-butadiene: characterization of gas and aerosol reaction products and implications for PM2.5, Atmos. Chem. Phys., 14, 13681–13704, https://doi.org/10.5194/acp-14-13681-2014, 2014. a
Jenkin, M., Saunders, S., and Pilling, M.: The tropospheric degradation of
volatile organic compounds: A protocol for mechanism development, Atmos.
Environ., 31, 81–104, https://doi.org/10.1016/S1352-2310(96)00105-7, 1997. a, b, c
Jenkin, M. E., Wyche, K. P., Evans, C. J., Carr, T., Monks, P. S., Alfarra, M. R., Barley, M. H., McFiggans, G. B., Young, J. C., and Rickard, A. R.: Development and chamber evaluation of the MCM v3.2 degradation scheme for β-caryophyllene, Atmos. Chem. Phys., 12, 5275–5308, https://doi.org/10.5194/acp-12-5275-2012, 2012. a
Kim, H. O., Han, Y. T., Kwon, S. B., and Lee, K. W.: Wall Loss Rate of
Polydispersed Aerosols, Aerosol Sci. Tech., 35, 710–717,
https://doi.org/10.1080/02786820152546752, 2001. a
Krechmer, J., Pagonis, D., Ziemann, P., and Jimenez, J.: Quantification of
gas-wall partitioning in Teflon Environmental Chambers Using Rapid bursts of
low-volatility oxidized species generated in situ, Environ. Sci. Technol.,
50, 5757–5765, https://doi.org/10.1021/acs.est.6b00606, 2016. a
Liu, J., D'Ambro, E., Lee, B., Lopez-Hilfiker, F., Zaveri, R., Rivera-Rios, J.,
Keutsch, F., Iyer, S., Kurten, T., Zhang, Z., Gold, A., Surratt, J.,
Shilling, J., and Thornton, J.: Efficient Isoprene Secondary Organic Aerosol
Formation from a Non-IEPOX Pathway, Environ. Sci. Technol., 50, 9872–9880,
https://doi.org/10.1021/acs.est.6b01872, 2016. a
Lowe, D., Topping, D., and McFiggans, G.: Modelling multi-phase halogen chemistry in the remote marine boundary layer: investigation of the influence of aerosol size resolution on predicted gas- and condensed-phase chemistry, Atmos. Chem. Phys., 9, 4559–4573, https://doi.org/10.5194/acp-9-4559-2009, 2009. a, b
Lowe, D., Archer-Nicholls, S., Morgan, W., Allan, J., Utembe, S., Ouyang, B., Aruffo, E., Le Breton, M., Zaveri, R. A., Di Carlo, P., Percival, C., Coe, H., Jones, R., and McFiggans, G.: WRF-Chem model predictions of the regional impacts of N2O5 heterogeneous processes on night-time chemistry over north-western Europe, Atmos. Chem. Phys., 15, 1385–1409, https://doi.org/10.5194/acp-15-1385-2015, 2015. a, b, c
Nah, T., McVay, R. C., Pierce, J. R., Seinfeld, J. H., and Ng, N. L.: Constraining uncertainties in particle-wall deposition correction during SOA formation in chamber experiments, Atmos. Chem. Phys., 17, 2297–2310, https://doi.org/10.5194/acp-17-2297-2017, 2017. a
Nannoolal, Y., Rarey, J., and Ramjugernath, D.: Estimation of pure component
properties Part 3. Estimation of the vapour pressure of non-electrolyte
organic compounds via group contributions and group interactions, Fluid Phase
Equilibr., 269, 117–133, https://doi.org/10.1016/j.fluid.2008.04.020, 2008. a, b, c, d
Naumann, K.-H.: COSIMA – a computer program simulating the dynamics of fractal
aerosols, J. Aerosol. Sci., 34, 1371–1397,
https://doi.org/10.1016/S0021-8502(03)00367-7, 2003. a
O'Boyle, N., Banck, M., James, C., Morley, C., Vandermeersch, T., and
Hutchinson, G.: Open Babel: An open chemical toolbox, J. Cheminformatics, 3, 33,
https://doi.org/10.1186/1758-2946-3-33, 2011. a
Odum, J., Hoffmann, T., Bowman, F., Collins, D., Flagan, R., and Seinfeld, J.:
Gas-particle partitioning and secondary organic aerosol yields, Environ. Sci.
Technol., 30, 2580–2585, https://doi.org/10.1021/es950943+, 1996. a
O'Meara, S., Xu, S., Topping, D., Capes, G., Lowe, D., Alfarra, M., and
McFiggans, G.: PyCHAM: CHemistry with Aerosol Microphysics in Python, Journal
of Open Source Software, 5, 1918, https://doi.org/10.21105/joss.01918, 2020. a, b
O'Meara, S. Xu, S., Topping, D., Capes, G., Lowe, D., and McFiggans, G.: PyCHAM: CHemistry with Aerosol Microphysics in Python,
available at: https://github.com/simonom/PyCHAM (last access: 26 January 2021), and Zenodo, https://doi.org/10.5281/zenodo.3752676, 2021. a
Peräkylä, O., Riva, M., Heikkinen, L., Quéléver, L., Roldin, P., and Ehn, M.: Experimental investigation into the volatilities of highly oxygenated organic molecules (HOMs) , Atmos. Chem. Phys., 20, 649–669, https://doi.org/10.5194/acp-20-649-2020, 2020. a
Pierce, J., Englehart, G., Hildebrandt, L., Weitkamp, E., Parthak, E., and
Donahue, N.: Constraining Particle Evolution from Wall Losses, Coagulation
and Condensation-Evaporation in Smog Chamber Experiments: Optimal Based Size
Distribution Measurements, Aerosol Sci. Tech., 42, 12,
https://doi.org/10.1080/02786820802389251, 2008. a
Riccobono, F., Schobesberger, S., Scott, C. E., Dommen, J., Ortega, I. K.,
Rondo, L., Almeida, J., Amorim, A., Bianchi, F., Breitenlechner, M., David,
A., Downard, A., Dunne, E. M., Duplissy, J., Ehrhart, S., Flagan, R. C.,
Franchin, A., Hansel, A., Junninen, H., Kajos, M., Keskinen, H., Kupc, A.,
Kürten, A., Kvashin, A. N., Laaksonen, A., Lehtipalo, K., Makhmutov, V.,
Mathot, S., Nieminen, T., Onnela, A., Petäjä, T., Praplan, A. P., Santos,
F. D., Schallhart, S., Seinfeld, J. H., Sipilä, M., Spracklen, D. V.,
Stozhkov, Y., Stratmann, F., Tomé, A., Tsagkogeorgas, G., Vaattovaara, P.,
Viisanen, Y., Vrtala, A., Wagner, P. E., Weingartner, E., Wex, H., Wimmer,
D., Carslaw, K. S., Curtius, J., Donahue, N. M., Kirkby, J., Kulmala, M.,
Worsnop, D. R., and Baltensperger, U.: Oxidation products of biogenic
emissions contribute to nucleation of atmospheric particles, Science, 344,
717–721, https://doi.org/10.1126/science.1243527, 2014. a
Rickard, A. and Young, J.: The Master Chemical Mechanism, available at:
http://mcm.leeds.ac.uk/MCM/ (last access: 27 January 2021), 2020. a
Roldin, P., Eriksson, A. C., Nordin, E. Z., Hermansson, E., Mogensen, D., Rusanen, A., Boy, M., Swietlicki, E., Svenningsson, B., Zelenyuk, A., and Pagels, J.: Modelling non-equilibrium secondary organic aerosol formation and evaporation with the aerosol dynamics, gas- and particle-phase chemistry kinetic multilayer model ADCHAM, Atmos. Chem. Phys., 14, 7953–7993, https://doi.org/10.5194/acp-14-7953-2014, 2014. a
Roldin, P., Liao, L., Mogensen, D., Dal Maso, M., Rusanen, A., Kerminen, V.-M., Mentel, T. F., Wildt, J., Kleist, E., Kiendler-Scharr, A., Tillmann, R., Ehn, M., Kulmala, M., and Boy, M.: Modelling the contribution of biogenic volatile organic compounds to new particle formation in the Jülich plant atmosphere chamber, Atmos. Chem. Phys., 15, 10777–10798, https://doi.org/10.5194/acp-15-10777-2015, 2015. a
Roldin, P., Ehn, M., Kurtén, T., Olenius, T., Rissanen, M., Sarnela, N.,
Elm, J., Rantala, P., Hao, L., Hyttinen, N., Heikkinen, L., Worsnop, D.,
Pichelstorfer, L., Xavier, C., Clusius, P., Öström, E.,
Petäjä, T., Kulmala, M., Vehkamäki, H., Virtanen, A., Riipinen,
I., and Boy, M.: The role of highly oxygenated organic molecules in the
Boreal aerosol-cloud-climate system, Nat. Commun., 10, 4370,
https://doi.org/10.1038/s41467-019-12338-8, 2019. a, b, c
Sandu, A. and Sander, R.: Technical note: Simulating chemical systems in Fortran90 and Matlab with the Kinetic PreProcessor KPP-2.1, Atmos. Chem. Phys., 6, 187–195, https://doi.org/10.5194/acp-6-187-2006, 2006. a
Sato, K., Nakao, S., Clark, C. H., Qi, L., and Cocker III, D. R.: Secondary organic aerosol formation from the photooxidation of isoprene, 1,3-butadiene, and 2,3-dimethyl-1,3-butadiene under high NOx conditions, Atmos. Chem. Phys., 11, 7301–7317, https://doi.org/10.5194/acp-11-7301-2011, 2011. a, b, c
Saunders, S. M., Jenkin, M. E., Derwent, R. G., and Pilling, M. J.: Protocol for the development of the Master Chemical Mechanism, MCM v3 (Part A): tropospheric degradation of non-aromatic volatile organic compounds, Atmos. Chem. Phys., 3, 161–180, https://doi.org/10.5194/acp-3-161-2003, 2003. a, b, c
Schwantes, R., McVay, R., Zhang, X., Coggon, M., Lignell, H., Flagan, R.,
Wennberg, P., and Seinfeld, J.: Advances in Atmospheric Chemistry,
in: Science of the Environmental Chamber, World Scientific,
https://doi.org/10.1142/10216, 2017. a
Seinfeld, J. and Pandis, S.: Atmospheric chemistry and physics: from air
pollution to climate change, Wiley, Hoboken, NJ, USA, 2006. a
Sommariva, R., Cox, S., Martin, C., Borońska, K., Young, J., Jimack, P. K., Pilling, M. J., Matthaios, V. N., Nelson, B. S., Newland, M. J., Panagi, M., Bloss, W. J., Monks, P. S., and Rickard, A. R.: AtChem (version 1), an open-source box model for the Master Chemical Mechanism, Geosci. Model Dev., 13, 169–183, https://doi.org/10.5194/gmd-13-169-2020, 2020. a, b
Sunol, A., Charan, S., and Seinfeld, J.: Computational simulation of the
dynamics of secondary organic aerosol formation in an environmental chamber,
Aerosol Sci. Tech., 52, 470–482, https://doi.org/10.1080/02786826.2018.1427209,
2018.
a
Surratt, J. D., Murphy, S. M., Kroll, J. H., Ng, N. L., Hildebrandt, L.,
Sorooshian, A., Szmigielski, R., Vermeylen, R., Maenhaut, W., Claeys, M.,
Flagan, R. C., and Seinfeld, J. H.: Chemical Composition of Secondary Organic
Aerosol Formed from the Photooxidation of Isoprene, J. Phys. Chem.-US, 110, 31,
https://doi.org/10.1021/jp061734m, 2006. a
Topping, D., Barley, M., Bane, M. K., Higham, N., Aumont, B., Dingle, N., and McFiggans, G.: UManSysProp v1.0: an online and open-source facility for molecular property prediction and atmospheric aerosol calculations, Geosci. Model Dev., 9, 899–914, https://doi.org/10.5194/gmd-9-899-2016, 2016. a
Topping, D., Connolly, P., and Reid, J.: PyBOX: An automated box-model
generator for atmospheric chemistry and aerosol simulations, J.
Open Source Software, 3, 28, https://doi.org/10.21105/joss.00755, 2018. a, b
Wang, N., Jorga, S. D., Pierce, J. R., Donahue, N. M., and Pandis, S. N.: Particle wall-loss correction methods in smog chamber experiments, Atmos. Meas. Tech., 11, 6577–6588, https://doi.org/10.5194/amt-11-6577-2018, 2018. a, b, c, d
Waring, M. S. and Wells, J. R.: Volatile organic compound conversion by ozone,
hydroxyl radicals, and nitrate radicals in residential indoor air: Magnitudes
and impacts of oxidant sources, Atmos. Environ., 106, 382–391,
https://doi.org/10.1016/j.atmosenv.2014.06.062, 2015. a
Weininger, D.: Smiles, a chemical language and information system. 1.
Introduction to methodology and encoding rules, J. Chem. Inf. Comp. Sci., 28,
31–36, https://doi.org/10.1021/ci00057a005, 1988. a, b
Zaveri, R., Easter, R., Fast, J., and Peters, L.: Model for
Simulating Aerosol Interactions and
Chemistry (MOSAIC), J. Geophys. Res., 113, D13204,
https://doi.org/10.1029/2007JD008782, 2008. a, b
Zhang, X., Schwantes, R. H., McVay, R. C., Lignell, H., Coggon, M. M., Flagan, R. C., and Seinfeld, J. H.: Vapor wall deposition in Teflon chambers, Atmos. Chem. Phys., 15, 4197–4214, https://doi.org/10.5194/acp-15-4197-2015, 2015. a, b, c, d
Zhao, R., Charan, S. M., Kenseth, C. M., Zhang, X., Huang, Y., Charan, S. M.,
Kenseth, C. M., and Seinfeld, J. H.: Unified Theory of Vapor-Wall Mass
Transport in Teflon-Walled Environmental Chambers, Environ. Sci. Technol., 52,
2134–2142, https://doi.org/10.1021/acs.est.7b05575, 2018. a
Short summary
User-friendly and open-source software for simulating aerosol chambers is a valuable tool for research scientists in designing and analysing their experiments. This paper describes a new version of such software and will therefore provide a useful reference for those applying it. Central to the paper is an assessment of the software's accuracy through comparison against previously published simulations.
User-friendly and open-source software for simulating aerosol chambers is a valuable tool for...
