Articles | Volume 13, issue 11
https://doi.org/10.5194/gmd-13-5507-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-13-5507-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Model description paper
| 
12 Nov 2020
Model description paper |
| 12 Nov 2020
| 12 Nov 2020
Description and evaluation of a detailed gas-phase chemistry scheme in the TM5-MP global chemistry transport model (r112)
Institute for Environmental Research and Sustainable Development
(IERSD), National Observatory of Athens, Penteli, Greece
Nikos Daskalakis
Institute of Environmental Physics, University of Bremen, Bremen,
Germany
Angelos Gkouvousis
Environmental Chemical Processes Laboratory (ECPL), Department of
Chemistry, University of Crete, Heraklion, Greece
Institute for Environmental Research and Sustainable Development
(IERSD), National Observatory of Athens, Penteli, Greece
Andreas Hilboll
Institute of Environmental Physics, University of Bremen, Bremen,
Germany
deceased, 25 March 2020
Twan van Noije
Royal Netherlands Meteorological Institute (KNMI), De Bilt, the
Netherlands
Jason E. Williams
Royal Netherlands Meteorological Institute (KNMI), De Bilt, the
Netherlands
Philippe Le Sager
Royal Netherlands Meteorological Institute (KNMI), De Bilt, the
Netherlands
Vincent Huijnen
Royal Netherlands Meteorological Institute (KNMI), De Bilt, the
Netherlands
Sander Houweling
Department of Earth Sciences, Vrije Universiteit Amsterdam, the
Netherlands
SRON Netherlands Institute for Space Research, Utrecht, the
Netherlands
Tommi Bergman
Finnish Meteorological Institute, Climate System Research, Helsinki,
Finland
Johann Rasmus Nüß
Institute of Environmental Physics, University of Bremen, Bremen,
Germany
Mihalis Vrekoussis
Institute of Environmental Physics, University of Bremen, Bremen,
Germany
Center for Marine Environmental Sciences, University of Bremen,
Bremen, Germany
Energy, Environment and Water Research Center (EEWRC), The Cyprus
Institute, Cyprus
Maria Kanakidou
Institute of Environmental Physics, University of Bremen, Bremen,
Germany
Environmental Chemical Processes Laboratory (ECPL), Department of
Chemistry, University of Crete, Heraklion, Greece
Department of Environmental Sciences, Wageningen University, Wageningen, the Netherlands
Institute for Marine and Atmospheric Research (IMAU), Utrecht
University, Utrecht, the Netherlands
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19 citations as recorded by crossref.
- AUTOGRAPH: Chemical Reaction Networks in 3D P. Kuboth et al. 10.1021/acs.jcim.4c02106
- Analysis of secondary inorganic aerosols over the greater Athens area using the EPISODE–CityChem source dispersion and photochemistry model S. Myriokefalitakis et al. 10.5194/acp-24-7815-2024
- Top-down CO emission estimates using TROPOMI CO data in the TM5-4DVAR (r1258) inverse modeling suit J. Nüß et al. 10.5194/gmd-18-2861-2025
- Pre‐Industrial, Present and Future Atmospheric Soluble Iron Deposition and the Role of Aerosol Acidity and Oxalate Under CMIP6 Emissions E. Bergas‐Massó et al. 10.1029/2022EF003353
- Changing atmospheric acidity as a modulator of nutrient deposition and ocean biogeochemistry A. Baker et al. 10.1126/sciadv.abd8800
- Quantification of lightning-produced NOx over the Pyrenees and the Ebro Valley by using different TROPOMI-NO2 and cloud research products F. Pérez-Invernón et al. 10.5194/amt-15-3329-2022
- Satellite-Based Aerosol Classification for Capital Cities in Asia Using a Random Forest Model W. Choi et al. 10.3390/rs13132464
- Multiphase processes in the EC-Earth model and their relevance to the atmospheric oxalate, sulfate, and iron cycles S. Myriokefalitakis et al. 10.5194/gmd-15-3079-2022
- In situ identification of aerosol types in Athens, Greece, based on long-term optical and on online chemical characterization D. Kaskaoutis et al. 10.1016/j.atmosenv.2020.118070
- EC-Earth3-AerChem: a global climate model with interactive aerosols and atmospheric chemistry participating in CMIP6 T. van Noije et al. 10.5194/gmd-14-5637-2021
- Future climate-driven fires may boost ocean productivity in the iron-limited North Atlantic E. Bergas-Masso et al. 10.1038/s41558-025-02356-4
- Simulating dust emissions and secondary organic aerosol formation over northern Africa during the mid-Holocene Green Sahara period P. Zhou et al. 10.5194/cp-19-2445-2023
- Regional evaluation of the performance of the global CAMS chemical modeling system over the United States (IFS cycle 47r1) J. Williams et al. 10.5194/gmd-15-4657-2022
- Measurement report: Combined use of MAX-DOAS and AERONET ground-based measurements in Montevideo, Uruguay, for the detection of distant biomass burning M. Osorio et al. 10.5194/acp-24-7447-2024
- Technical note: Evaluation of the Copernicus Atmosphere Monitoring Service Cy48R1 upgrade of June 2023 H. Eskes et al. 10.5194/acp-24-9475-2024
- High-Resolution Measurements of SO2, HNO3 and HCl at the Urban Environment of Athens, Greece: Levels, Variability and Gas to Particle Partitioning E. Liakakou et al. 10.3390/atmos13020218
- Competing and accelerating effects of anthropogenic nutrient inputs on climate-driven changes in ocean carbon and oxygen cycles A. Yamamoto et al. 10.1126/sciadv.abl9207
- Combining the Emission Preprocessor HERMES with the Chemical Transport Model TM5-MP S. Seemann et al. 10.3390/atmos15040469
- HighResMIP versions of EC-Earth: EC-Earth3P and EC-Earth3P-HR – description, model computational performance and basic validation R. Haarsma et al. 10.5194/gmd-13-3507-2020
18 citations as recorded by crossref.
- AUTOGRAPH: Chemical Reaction Networks in 3D P. Kuboth et al. 10.1021/acs.jcim.4c02106
- Analysis of secondary inorganic aerosols over the greater Athens area using the EPISODE–CityChem source dispersion and photochemistry model S. Myriokefalitakis et al. 10.5194/acp-24-7815-2024
- Top-down CO emission estimates using TROPOMI CO data in the TM5-4DVAR (r1258) inverse modeling suit J. Nüß et al. 10.5194/gmd-18-2861-2025
- Pre‐Industrial, Present and Future Atmospheric Soluble Iron Deposition and the Role of Aerosol Acidity and Oxalate Under CMIP6 Emissions E. Bergas‐Massó et al. 10.1029/2022EF003353
- Changing atmospheric acidity as a modulator of nutrient deposition and ocean biogeochemistry A. Baker et al. 10.1126/sciadv.abd8800
- Quantification of lightning-produced NOx over the Pyrenees and the Ebro Valley by using different TROPOMI-NO2 and cloud research products F. Pérez-Invernón et al. 10.5194/amt-15-3329-2022
- Satellite-Based Aerosol Classification for Capital Cities in Asia Using a Random Forest Model W. Choi et al. 10.3390/rs13132464
- Multiphase processes in the EC-Earth model and their relevance to the atmospheric oxalate, sulfate, and iron cycles S. Myriokefalitakis et al. 10.5194/gmd-15-3079-2022
- In situ identification of aerosol types in Athens, Greece, based on long-term optical and on online chemical characterization D. Kaskaoutis et al. 10.1016/j.atmosenv.2020.118070
- EC-Earth3-AerChem: a global climate model with interactive aerosols and atmospheric chemistry participating in CMIP6 T. van Noije et al. 10.5194/gmd-14-5637-2021
- Future climate-driven fires may boost ocean productivity in the iron-limited North Atlantic E. Bergas-Masso et al. 10.1038/s41558-025-02356-4
- Simulating dust emissions and secondary organic aerosol formation over northern Africa during the mid-Holocene Green Sahara period P. Zhou et al. 10.5194/cp-19-2445-2023
- Regional evaluation of the performance of the global CAMS chemical modeling system over the United States (IFS cycle 47r1) J. Williams et al. 10.5194/gmd-15-4657-2022
- Measurement report: Combined use of MAX-DOAS and AERONET ground-based measurements in Montevideo, Uruguay, for the detection of distant biomass burning M. Osorio et al. 10.5194/acp-24-7447-2024
- Technical note: Evaluation of the Copernicus Atmosphere Monitoring Service Cy48R1 upgrade of June 2023 H. Eskes et al. 10.5194/acp-24-9475-2024
- High-Resolution Measurements of SO2, HNO3 and HCl at the Urban Environment of Athens, Greece: Levels, Variability and Gas to Particle Partitioning E. Liakakou et al. 10.3390/atmos13020218
- Competing and accelerating effects of anthropogenic nutrient inputs on climate-driven changes in ocean carbon and oxygen cycles A. Yamamoto et al. 10.1126/sciadv.abl9207
- Combining the Emission Preprocessor HERMES with the Chemical Transport Model TM5-MP S. Seemann et al. 10.3390/atmos15040469
Latest update: 13 Jul 2025
Short summary
This work documents and evaluates the detailed tropospheric gas-phase chemical mechanism MOGUNTIA in the three-dimensional chemistry transport model TM5-MP. The Rosenbrock solver, as generated by the KPP software, is implemented in the chemistry code, which can successfully replace the classical Euler backward integration method. The MOGUNTIA scheme satisfactorily simulates a large suite of oxygenated volatile organic compounds (VOCs) that are observed in the atmosphere at significant levels.
This work documents and evaluates the detailed tropospheric gas-phase chemical mechanism...
