Articles | Volume 12, issue 1
https://doi.org/10.5194/gmd-12-275-2019
© Author(s) 2019. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/gmd-12-275-2019
© Author(s) 2019. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Model description paper
| 
17 Jan 2019
Model description paper |
| 17 Jan 2019
| 17 Jan 2019
Ecological ReGional Ocean Model with vertically resolved sediments (ERGOM SED 1.0): coupling benthic and pelagic biogeochemistry of the south-western Baltic Sea
Hagen Radtke
CORRESPONDING AUTHOR
Department of Physical Oceanography and Instrumentation, Leibniz Institute for Baltic Sea Research Warnemuende (IOW), Seestr. 15, 18119 Warnemünde, Germany
Marko Lipka
Geochemistry and Isotope Biogeochemistry Group, Department of Marine Geology, Leibniz Institute for Baltic Sea Research Warnemuende (IOW), Seestr. 15, 18119 Warnemünde, Germany
Dennis Bunke
Paleooceanography and Sedimentology Group, Department of Marine Geology, Leibniz Institute for Baltic Sea Research Warnemuende (IOW), Seestr. 15, 18119 Warnemünde, Germany
current address: Institute of Geophysics and Geology, Leipzig University, Talstr. 15, 04013 Leipzig, Germany
Claudia Morys
Institute for Biosciences, University of Rostock, Albert-Einstein-Str. 3, 18059 Rostock, Germany
current address: Department of Estuarine and Delta Systems, Royal Netherlands Institute for Sea Research (NIOZ), and Utrecht University, Korringaweg 7, 4401 NT Yerseke, the Netherlands
Jana Woelfel
Working group on Trace Gas Biogeochemistry, Department of Marine Chemistry, Leibniz Institute for Baltic Sea Research Warnemuende (IOW), Seestr. 15, 18119 Warnemünde, Germany
Bronwyn Cahill
Department of Physical Oceanography and Instrumentation, Leibniz Institute for Baltic Sea Research Warnemuende (IOW), Seestr. 15, 18119 Warnemünde, Germany
current address: Institute for Space Science, Freie Universität Berlin, Carl-Heinrich-Becker-Weg 6–10, 12165 Berlin, Germany
Michael E. Böttcher
Geochemistry and Isotope Biogeochemistry Group, Department of Marine Geology, Leibniz Institute for Baltic Sea Research Warnemuende (IOW), Seestr. 15, 18119 Warnemünde, Germany
Stefan Forster
Institute for Biosciences, University of Rostock, Albert-Einstein-Str. 3, 18059 Rostock, Germany
Thomas Leipe
Microanalysis Group, Department of Marine Geology, Leibniz Institute for Baltic Sea Research Warnemuende (IOW), Seestr. 15, 18119 Warnemünde, Germany
Gregor Rehder
Working group on Trace Gas Biogeochemistry, Department of Marine Chemistry, Leibniz Institute for Baltic Sea Research Warnemuende (IOW), Seestr. 15, 18119 Warnemünde, Germany
Thomas Neumann
Department of Physical Oceanography and Instrumentation, Leibniz Institute for Baltic Sea Research Warnemuende (IOW), Seestr. 15, 18119 Warnemünde, Germany
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Cited
18 citations as recorded by crossref.
- In Situ Measurements of Explosive Compound Dissolution Fluxes from Exposed Munition Material in the Baltic Sea A. Beck et al. 10.1021/acs.est.8b06974
- Influence of Rivers, Tides, and Tidal Wetlands on Estuarine Carbonate System Dynamics F. Da et al. 10.1007/s12237-024-01421-z
- Quantifying Importance of Macrobenthos for Benthic‐Pelagic Coupling in a Temperate Coastal Shelf Sea W. Zhang et al. 10.1029/2020JC016995
- Applications of biogeochemical models in different marine environments: a review K. Ismail & M. Al-Shehhi 10.3389/fenvs.2023.1198856
- Influence of suspended mariculture on vertical distribution profiles of bacteria in sediment from Daya Bay, Southern China R. Shi et al. 10.1016/j.marpolbul.2019.07.043
- Optical model for the Baltic Sea with an explicit CDOM state variable: a case study with Model ERGOM (version 1.2) T. Neumann et al. 10.5194/gmd-14-5049-2021
- Contribution of the open ocean to the nutrient and phytoplankton inventory in a semi-enclosed coastal sea Q. Leng et al. 10.5194/bg-20-4323-2023
- Modeling of Water Quality Indicators in the Western Baltic Sea: Seasonal Oxygen Deficiency S. Piehl et al. 10.1007/s10666-022-09866-x
- Hydrodynamic Control of Sediment‐Water Fluxes: Consistent Parameterization and Impact in Coupled Benthic‐Pelagic Models L. Umlauf et al. 10.1029/2023JC019651
- Effect of organic matter on the environmental behavior of sulfur and heavy metals in mariculture sediments during the aging process Z. Li et al. 10.1016/j.marpolbul.2024.116420
- Dynamics of oxygen sources and sinks in the Baltic Sea under different nutrient inputs L. Naumov et al. 10.3389/fmars.2023.1233324
- Critical geochemical insight into Alexandria coast with special reference to diagnostic ratios (TOC/TN & Sr/Ca) and heavy metals ecotoxicological hazards G. El Zokm et al. 10.1016/j.ejar.2019.12.006
- Bacterial community responses to the redox profile changes of mariculture sediment R. Shi et al. 10.1016/j.marpolbul.2021.112250
- Biogeochemical functioning of the Baltic Sea K. Kuliński et al. 10.5194/esd-13-633-2022
- Limited ventilation of the central Baltic Sea due to elevated oxygen consumption L. Naumov et al. 10.3389/fmars.2023.1175643
- Biogeochemical dynamics underlying equilibrium between nitrogen fixation and denitrification and its impact on a coastal marine ecosystem model J. Choi & T. Lippmann 10.1016/j.ecolmodel.2024.110767
- Managing Eutrophication in the Szczecin (Oder) Lagoon-Development, Present State and Future Perspectives R. Friedland et al. 10.3389/fmars.2018.00521
- Spatial Effects of Different Zebra Mussel Farming Strategies in an Eutrophic Baltic Lagoon R. Friedland et al. 10.3389/fenvs.2018.00158
16 citations as recorded by crossref.
- In Situ Measurements of Explosive Compound Dissolution Fluxes from Exposed Munition Material in the Baltic Sea A. Beck et al. 10.1021/acs.est.8b06974
- Influence of Rivers, Tides, and Tidal Wetlands on Estuarine Carbonate System Dynamics F. Da et al. 10.1007/s12237-024-01421-z
- Quantifying Importance of Macrobenthos for Benthic‐Pelagic Coupling in a Temperate Coastal Shelf Sea W. Zhang et al. 10.1029/2020JC016995
- Applications of biogeochemical models in different marine environments: a review K. Ismail & M. Al-Shehhi 10.3389/fenvs.2023.1198856
- Influence of suspended mariculture on vertical distribution profiles of bacteria in sediment from Daya Bay, Southern China R. Shi et al. 10.1016/j.marpolbul.2019.07.043
- Optical model for the Baltic Sea with an explicit CDOM state variable: a case study with Model ERGOM (version 1.2) T. Neumann et al. 10.5194/gmd-14-5049-2021
- Contribution of the open ocean to the nutrient and phytoplankton inventory in a semi-enclosed coastal sea Q. Leng et al. 10.5194/bg-20-4323-2023
- Modeling of Water Quality Indicators in the Western Baltic Sea: Seasonal Oxygen Deficiency S. Piehl et al. 10.1007/s10666-022-09866-x
- Hydrodynamic Control of Sediment‐Water Fluxes: Consistent Parameterization and Impact in Coupled Benthic‐Pelagic Models L. Umlauf et al. 10.1029/2023JC019651
- Effect of organic matter on the environmental behavior of sulfur and heavy metals in mariculture sediments during the aging process Z. Li et al. 10.1016/j.marpolbul.2024.116420
- Dynamics of oxygen sources and sinks in the Baltic Sea under different nutrient inputs L. Naumov et al. 10.3389/fmars.2023.1233324
- Critical geochemical insight into Alexandria coast with special reference to diagnostic ratios (TOC/TN & Sr/Ca) and heavy metals ecotoxicological hazards G. El Zokm et al. 10.1016/j.ejar.2019.12.006
- Bacterial community responses to the redox profile changes of mariculture sediment R. Shi et al. 10.1016/j.marpolbul.2021.112250
- Biogeochemical functioning of the Baltic Sea K. Kuliński et al. 10.5194/esd-13-633-2022
- Limited ventilation of the central Baltic Sea due to elevated oxygen consumption L. Naumov et al. 10.3389/fmars.2023.1175643
- Biogeochemical dynamics underlying equilibrium between nitrogen fixation and denitrification and its impact on a coastal marine ecosystem model J. Choi & T. Lippmann 10.1016/j.ecolmodel.2024.110767
2 citations as recorded by crossref.
Latest update: 20 Nov 2024
Short summary
This paper describes a coupled benthic–pelagic biogeochemical model, ERGOM-SED. We demonstrate its use in a one-dimensional physical model, which is horizontally integrated and vertically resolved. We describe the application of the model to seven stations in the south-western Baltic Sea. The model was calibrated using pore water profiles from these stations. We compare the model results to these and to measured sediment compositions, benthopelagic fluxes and bioturbation intensities.
This paper describes a coupled benthic–pelagic biogeochemical model, ERGOM-SED. We demonstrate...
