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  <front>
    <journal-meta>
<journal-id journal-id-type="publisher">GMD</journal-id>
<journal-title-group>
<journal-title>Geoscientific Model Development</journal-title>
<abbrev-journal-title abbrev-type="publisher">GMD</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Geosci. Model Dev.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1991-9603</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>

    <article-meta>
      <article-id pub-id-type="doi">10.5194/gmd-9-2853-2016</article-id><title-group><article-title>C4MIP – The Coupled Climate–Carbon Cycle Model Intercomparison Project:
experimental protocol for CMIP6</article-title>
      </title-group><?xmltex \runningtitle{The Coupled Climate--Carbon Cycle Model Intercomparison Project}?><?xmltex \runningauthor{C.~D. Jones et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Jones</surname><given-names>Chris D.</given-names></name>
          <email>chris.d.jones@metoffice.gov.uk</email>
        <ext-link>https://orcid.org/0000-0002-7141-9285</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Arora</surname><given-names>Vivek</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Friedlingstein</surname><given-names>Pierre</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3309-4739</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Bopp</surname><given-names>Laurent</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Brovkin</surname><given-names>Victor</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-6420-3198</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Dunne</surname><given-names>John</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff7">
          <name><surname>Graven</surname><given-names>Heather</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff8">
          <name><surname>Hoffman</surname><given-names>Forrest</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5802-4134</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Ilyina</surname><given-names>Tatiana</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3475-4842</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>John</surname><given-names>Jasmin G.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff9">
          <name><surname>Jung</surname><given-names>Martin</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff10">
          <name><surname>Kawamiya</surname><given-names>Michio</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff11">
          <name><surname>Koven</surname><given-names>Charlie</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3367-0065</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Pongratz</surname><given-names>Julia</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-0372-3960</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Raddatz</surname><given-names>Thomas</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff12">
          <name><surname>Randerson</surname><given-names>James T.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff9">
          <name><surname>Zaehle</surname><given-names>Sönke</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5602-7956</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Met Office Hadley Centre, Exeter, EX1 3PB, UK</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Canadian Centre for Climate Modelling and Analysis, Climate Research
Division, Environment and Climate Change, Victoria, Canada</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>College of Engineering, Mathematics and Physical Sciences,
University of Exeter, Exeter, EX4 4QE, UK</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Laboratoire des Sciences du Climat et de l'Environnement,
LSCE/IPSL, CEA-CNRS-UVSQ, Université Paris-Saclay, 91191
Gif-sur-Yvette, France</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Max Planck Institute for Meteorology, Hamburg, Germany</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>NOAA/GFDL, Princeton, NJ, USA</institution>
        </aff>
        <aff id="aff7"><label>7</label><institution>Department of Physics and Grantham Institute, Imperial College
London, London, UK</institution>
        </aff>
        <aff id="aff8"><label>8</label><institution>Oak Ridge National Lab., Oak Ridge, TN, USA</institution>
        </aff>
        <aff id="aff9"><label>9</label><institution>Biogeochemical Integration Department, Max Planck Institute for
Biogeochemistry, 07745 Jena, Germany</institution>
        </aff>
        <aff id="aff10"><label>10</label><institution>Japan Agency for Marine-Earth Science and Technology, Kanagawa, Japan</institution>
        </aff>
        <aff id="aff11"><label>11</label><institution>Earth Sciences Division, Lawrence Berkeley National Laboratory,
Berkeley, CA, USA</institution>
        </aff>
        <aff id="aff12"><label>12</label><institution>Department of Earth System Science, University of California,
Irvine, CA
USA</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Chris D. Jones (chris.d.jones@metoffice.gov.uk)</corresp></author-notes><pub-date><day>25</day><month>August</month><year>2016</year></pub-date>
      
      <volume>9</volume>
      <issue>8</issue>
      <fpage>2853</fpage><lpage>2880</lpage>
      <history>
        <date date-type="received"><day>12</day><month>February</month><year>2016</year></date>
           <date date-type="rev-request"><day>16</day><month>March</month><year>2016</year></date>
           <date date-type="rev-recd"><day>1</day><month>July</month><year>2016</year></date>
           <date date-type="accepted"><day>5</day><month>July</month><year>2016</year></date>
      </history>
      <permissions>
<license license-type="open-access">
<license-p>This work is licensed under a Creative Commons Attribution 3.0 Unported License. To view a copy of this license, visit <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/3.0/">http://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions><self-uri xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016.html">This article is available from https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016.html</self-uri>
<self-uri xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016.pdf">The full text article is available as a PDF file from https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016.pdf</self-uri>


      <abstract>
    <p>Coordinated experimental design and implementation has become a
cornerstone of global climate modelling. Model Intercomparison Projects
(MIPs) enable systematic and robust analysis of results across many models,
by reducing the influence of ad hoc differences in model set-up or
experimental boundary conditions. As it enters its 6th phase, the
Coupled Model Intercomparison Project (CMIP6) has grown significantly in
scope with the design and documentation of individual simulations delegated
to individual climate science communities.</p>
    <p>The Coupled Climate–Carbon Cycle Model Intercomparison Project (C4MIP) takes
responsibility for design, documentation, and analysis of carbon cycle
feedbacks and interactions in climate simulations. These feedbacks are
potentially large and play a leading-order contribution in determining the
atmospheric composition in response to human emissions of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and in
the setting of emissions targets to stabilize climate or avoid dangerous
climate change. For over a decade, C4MIP has coordinated coupled
climate–carbon cycle simulations, and in this paper we describe the C4MIP
simulations that will be formally part of CMIP6. While the climate–carbon
cycle community has created this experimental design, the simulations also
fit within the wider CMIP activity, conform to some common standards
including documentation and diagnostic requests, and are designed to
complement the CMIP core experiments known as the Diagnostic, Evaluation and Characterization of Klima (DECK).</p>
    <p>C4MIP has three key strands of scientific motivation and the requested
simulations are designed to satisfy their needs: (1) pre-industrial and
historical simulations (formally part of the common set of CMIP6
experiments) to enable model evaluation, (2) idealized coupled and
partially coupled simulations with 1 % per year increases in CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> to
enable diagnosis of feedback strength and its components, (3) future
scenario simulations to project how the Earth system will respond to
anthropogenic activity over the 21st century and beyond.</p>
    <p>This paper documents in detail these simulations, explains their rationale
and planned analysis, and describes how to set up and run the simulations.
Particular attention is paid to boundary conditions, input data, and
requested output diagnostics. It is important that modelling groups
participating in C4MIP adhere as closely as possible to this experimental
design.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p>Over the industrial era since about 1750, it is estimated that cumulative
anthropogenic carbon emissions from fossil fuels and cement (405 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 20 PgC)
and land-use change (190 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 65 PgC) have been partitioned between
the atmosphere (255 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 5 PgC), the ocean (170 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 20 PgC), and the
terrestrial biosphere (165 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 70 PgC) (values to the nearest 5 PgC, from
Le Quéré et al., 2015). The carbon uptake by land and ocean, since
the start of the industrial era, has thus slowed the rate of increase of
atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration in response to anthropogenic carbon
emissions. Had the land and ocean not provided this “ecosystem service”, the
atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration at present would be much higher. The
manner in which the land and ocean will continue to absorb anthropogenic
carbon emissions has both scientific and policy relevance. Understanding the
future partitioning of anthropogenic CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions into the atmosphere,
land and ocean components, and the resulting climate change, accounting for
biogeochemical feedbacks requires a full Earth system approach to modelling
the climate and carbon cycle.</p>
      <p>The primary focus of the Coupled Climate–Carbon Cycle Model Intercomparison
Project (C4MIP; <uri>http://www.c4mip.net</uri>) is to understand and
quantify future century-scale changes in land and ocean carbon storage and
fluxes and their impact on climate projections. In order to achieve this, a
set of Earth system model (ESM) simulations has been devised. As a
consequence of the very high computational demand on modelling centres to
perform a multitude of simulations for many different intercomparison
studies as part of CMIP6, we have carefully chosen a minimum set of targeted
simulations to achieve C4MIP goals. They comprise
<list list-type="bullet"><list-item><p>idealized experiments, which will be used to separate and quantify the
sensitivity of land and ocean carbon cycle to changes in climate and
atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration;</p></list-item><list-item><p>historical experiments, which will be used to evaluate model performance and
investigate the potential for using contemporary observations as a
constraint on future projections;</p></list-item><list-item><p>future scenario experiments, which will be used to quantify future changes in
carbon storage and hence quantify the atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration and
related climate change for a given set of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions, or,
conversely, to diagnose the emissions compatible with a prescribed
atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration pathway.</p></list-item></list>
The simulations are designed to complement those requested in the CMIP6 Diagnostic, Evaluation and Characterization of Klima (DECK)
and the CMIP6 historical simulation (Eyring et al., 2016a). They also align
closely with simulations performed as part of ScenarioMIP (O'Neill et al.,
2016) by quantifying the role of carbon cycle feedbacks in the evolution of
atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> due to anthropogenic carbon emissions. Synergies with
other MIPs are discussed in Sect. 2. C4MIP simulations and analyses will
play a major role contributing to the WCRP Carbon Feedbacks in the Climate
System – Grand Challenge (<uri>http://www.wcrp-climate.org/gc-carbon-feedbacks</uri>). This is the third
generation of C4MIP following the first coordinated experiments described in
Friedlingstein et al. (2006) and the carbon cycle simulations that formed
part of CMIP5 (Taylor et al., 2012).</p>
      <p>In this paper we first briefly describe the scientific rationale and
motivation for the C4MIP simulations and then carefully document the
experimental protocol in Sect. 3. Modelling groups intending to
participate in C4MIP should follow the design described here as closely as
possible. Particular attention should be given to the set-up of boundary
conditions in terms of atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration or emissions and
which aspects of the model experience changes in the fully coupled or
partially coupled simulations. Output requirements (diagnostics) are also
carefully documented in Sect. 4.</p>
      <p>Along with our science motivation (Sect. 2), we highlight initial plans for
the analyses of the carbon cycle and its interactions with the physical
climate system. Modelling groups will be invited to contribute to the
primary C4MIP analysis papers. We anticipate, and hope, that many further
studies and analyses will also be conducted throughout the climate–carbon
cycle research community and that these simulations provide a valuable
resource to further carbon cycle research.</p>
</sec>
<sec id="Ch1.S2">
  <title>Background and science motivation</title>
<sec id="Ch1.S2.SS1">
  <title>C4MIP history</title>
      <p>The potential for a climate feedback on the carbon cycle whereby carbon
released due to warming would further elevate atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and
amplify climate change was first discussed in the late 1980s–early
1990s (e.g. Lashof et al., 1989; Jenkinson et al., 1991; Schimel et al.,
1994; Kirschbaum, 1995; Sarmiento and Le Quéré, 1996). On the land
side, dynamic global vegetation models were used to study the impact of
rising CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and climate change on the carbon cycle (Cramer et al.,
2001). There was a strong model consensus that rising CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> would
stimulate additional vegetation growth and storage of carbon in terrestrial
ecosystems, likewise warming climate would accelerate decomposition of dead
organic matter and may also reduce vegetation productivity in some (mainly
tropical) ecosystems (Prentice et al., 2001). Similarly for the ocean, there
was also a model consensus that warming would lead to reduced carbon uptake
(Prentice et al., 2001). This was due to both reduced solubility in warmer
waters and reduced rate of transport of anthropogenic carbon to the deep
ocean as a consequence of increasing stratification and shutdown of
meridional overturning circulation. The processes behind the former
(carbonate chemistry and solubility) were reasonably well understood
(Bacastow, 1993), but the latter was much more uncertain being sensitive to
the underlying ocean model circulation (Maier-Reimer et al., 1996; Sarmiento
et al., 1998; Joos et al., 1999). The role of ocean biology and the
buffering capacity of the ocean were also seen to be important and not well
constrained or represented in models (Sarmiento and Le Quéré, 1996).</p>
      <p>These “offline” land and ocean experiments found potentially high
sensitivity of the carbon cycle to environmental forcing but were not able
to simulate the full effect of this feedback onto climate. By the end of the
1990s some modelling groups were beginning to implement interactive carbon
cycle modules in their physical climate models. These early studies (e.g.
Cox et al., 2000; Friedlingstein et al., 2001; Dufresne et al., 2002;
Thompson et al., 2004) were able to recreate an experimental setting more
like the real world where a climate change forced by anthropogenic CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
emissions would affect natural carbon sinks and stores, which in turn would
affect changes in atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and hence climate.</p>
      <p>It soon became apparent from the first publications that there were
substantial differences in the sensitivities of these new models. The desire
to understand and reduce this uncertainty led to the development of a
linearized feedback framework to diagnose the sensitivity of different parts
of the system and their contribution to the overall feedback (Friedlingstein
et al., 2003), and also of a multi-model intercomparison activity (C4MIP:
Coupled Climate–Carbon Cycle Model Intercomparison; Fung et al., 2000). The
result was the first C4MIP intercomparison paper, (Friedlingstein et al., 2006), which quantified the feedback components across 11 models for a
common CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions scenario. All models agreed qualitatively that the
sign of the carbon–climate feedback was positive – i.e. the interaction of
the carbon cycle with climate led to reduced carbon uptake and hence an
increase in atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, which amplified the initial climate
change. However, there was large quantitative model spread in the total
feedback and its sensitivity components. Initial analysis of the causes of
this uncertainty concluded that the land played a greater role than the
ocean, in particular its sensitivity to climate. Regionally, the tropics
were seen to be particularly different between models (Raddatz et al.,
2007), bearing in mind that none of these models included representation of
permafrost carbon. The CMIP5 experimental design for carbon cycle feedback
diagnosis (Taylor et al., 2012) closely followed the C4MIP protocol.
Modelling centres around the world contributed results to CMIP5 and their
analysis led to many key papers including a special collection of 15 papers
published in the <italic>Journal of Climate</italic>
(<uri>http://journals.ametsoc.org/topic/c4mip</uri>).</p>
      <p>The C4MIP activity under CMIP5 was central to Working Group 1 of the IPCC
5th Assessment. Several of the main findings from C4MIP studies were
included in the Summary for Policymakers of WG1, such as the positive
feedback between climate and carbon cycle – “climate change will affect
carbon cycle processes in a way that will exacerbate the increase of
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> in the atmosphere”; the impact of elevated CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> on ocean
acidification – “further uptake of carbon by the ocean will increase ocean
acidification”; the emissions compatible with given CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations – “by the end of the 21st century, [for RCP2.6] about half of the models
infer emissions slightly above zero, while the other half infer a net
removal of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> from the atmosphere”; and the very policy relevant
relationship between cumulative CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions and global warming –
“cumulative emissions of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> largely determine global mean surface
warming by the late 21st century and beyond”.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Key science motivation and analysis plans for C4MIP</title>
      <p>The key science motivations behind C4MIP are (1) to quantify and understand
the carbon-concentration and carbon–climate feedback parameters which
respectively, capture the modelled response of land and ocean carbon cycle
components to changes in atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and the associated climate
change; (2) to evaluate models by comparing historical simulations with
observation-based estimates of climatological states of carbon cycle
variables, their variability, and long-term trends; (3) to assess the future
projections of the components of the global carbon budget for different
scenarios, including atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration, atmosphere–land and
atmosphere–ocean fluxes of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, diagnosed CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions
compatible with future scenarios of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> pathway and crucially to
provide new estimates of the cumulative CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions compatible with
specific climate targets. In light of the COP21 Paris agreement (<uri>https://unfccc.int/resource/docs/2015/cop21/eng/l09r01.pdf</uri>), these
experiments will quantify carbon cycle feedbacks in low emissions scenarios
and inform cumulative budgets consistent with a 1.5 or
2 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C stabilization objective.</p>
      <p>Relative to CMIP5 there are three key areas where we expect CMIP6 models to
have made substantial progress and hence may cause significant differences
in the simulated response of the carbon cycle to anthropogenic forcing.
<list list-type="custom"><list-item><label>i.</label><p>In CMIP5, only two participating ESMs included a land surface component
(CLM4) that explicitly considered constraints of terrestrial N availability
on primary production and net land carbon storage (Lindsay et al., 2014;
Tjiputra et al., 2013). An increasing number of land models now include a
prognostic representation of the terrestrial N cycle and its coupling to the
land C cycle (Zaehle and Dalmonech, 2011). Some of these prognostic N cycle
representations are expected to be used in land components of ESMs
participating in CMIP6. Coupling of carbon and nitrogen dynamics changes the
response of the terrestrial biosphere to global change in four ways: (1) it
generally reduces the response of net primary production and carbon storage
to elevated levels of atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> because of an increasing limit of
nitrogen availability for carboxylation enzymes and new tissue construction;
(2) it allows for changes in plant allocation in response to changing
nutrient availability; (3) it generally decreases net ecosystem C losses
associated with soil warming, because increased decomposition leads to
increased plant N availability, which can potentially increase plant
productivity and C storage in N-limited ecosystems; and (4) it alters primary
production due to anthropogenic N deposition and fertilizer application,
which may regionally enhance net C uptake. The magnitude of each of these
processes is uncertain given strong natural gradients in the natural N
availability in ecosystems and sparse ecosystem data to constrain these
models (Thornton et al., 2009; Zaehle et al., 2014; Meyerholt and Zaehle,
2015) but offline analysis of CMIP5 simulations suggests significant
overestimation of terrestrial carbon uptake in models that neglect the role of nitrogen (Wieder et al., 2015;
Zaehle et al., 2015). The new generation of models will provide a more
comprehensive assessment of the attenuating effect of nitrogen on carbon
cycle dynamics compared to CMIP5 and in particular provide a better
constrained estimate of the carbon storage capacity of land ecosystems.</p></list-item><list-item><label>ii.</label><p>In CMIP5, all land models used a single-layer, vertically integrated
representation of soil biogeochemistry (Luo et al., 2016). Such an approach
necessarily ignores vertical variation in soil carbon turnover times, which
can be very important in governing ecosystem carbon storage. This omission
is most notable in the extreme case of permafrost soils, where there exists
a depth at which soils remain frozen year-round and, because of the abrupt
change in decomposition rates in frozen vs. unfrozen soils, otherwise
highly decomposable carbon can be preserved indefinitely until it is thawed.
The majority of global soil carbon is in permafrost-affected ecosystems,
which creates the possibility for permafrost climate feedbacks (Burke et
al., 2013). Some of the models in CMIP6 are expected to include
representation of permafrost soil carbon dynamics, either explicitly by
representing soil biogeochemistry along the full soil depth axis (Koven et
al., 2013), or by means of reduced-complexity methods to incorporate
permafrost dynamics. IPCC Fifth Assessment Report (AR5) concluded that permafrost carbon release was
likely, and therefore would increase the climate–carbon cycle feedback, but
with low confidence in the magnitude (Ciais et al., 2013). Assessing the
role of this process in governing fully coupled climate feedbacks will be an
important contribution to CMIP6.</p></list-item><list-item><label>iii.</label><p>Representation of ocean dynamics in the ESMs is another important
constraint affecting the oceanic carbon uptake and storage. There is
evidence that by shifting to an eddy-permitting grid configuration of the
ocean general circulation model, the representation of some key features of
oceanic circulation, such as the interior water-mass properties and surface
ocean current systems, are improved (Jungclaus et al., 2013). The increased
horizontal resolution of the underlying ocean model has a positive impact on
the performance of the marine biogeochemistry model in the deeper layers
(Ilyina et al., 2013). Spatial resolution of some ESMs is expected to
increase as they move into CMIP6. The increased resolution of the oceanic
components of the ESMs is expected to have some explicit advantages for
projections of the oceanic carbon uptake. First, it allows us to estimate
the role of previously unresolved small-scale ocean hydrodynamical process
on projections of marine biogeochemistry. Second, by improving the
representation of coastal processes and ocean–shelf exchange, their
contribution to the global carbon cycle can be assessed.</p></list-item></list></p>
<sec id="Ch1.S2.SS2.SSS1">
  <title>Carbon cycle feedback parameters</title>
      <p>The first key motivation for C4MIP is to document the changes in magnitude
of the feedback parameters that characterize the response of the carbon
cycle and their spread across models through time. In this respect, C4MIP
aims to calculate the magnitude of the carbon-concentration and
carbon–climate feedbacks in a manner similar to Friedlingstein et al. (2006)
or Arora et al. (2013) and as discussed in Sect. 3.1 using results from
the idealized 1 % per year increasing CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> experiments.</p>
      <p>The 1pctCO2 experiment has gained recognition as a standard CMIP simulation
and it is one of the DECK simulations for CMIP6 (Eyring et al., 2016a). The
1pctCO2 experiment is now routinely used to characterize the transient
climate response (TCR) defined as the change in globally averaged
near-surface air temperature at the time of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> doubling as well as the
transient climate response to cumulative emissions (TCRE) defined as change
in globally averaged near-surface air temperature per unit cumulative
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions at the time of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> doubling (Gillett et al., 2013).
In addition, since the 1pctCO2 simulation does not include the confounding
effects of changes in land use, non-CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> greenhouse gases, and aerosols
it provides a clean controlled experiment with which to compare
carbon–climate interactions across models. Its backwards compatibility
enables direct comparison of models with previous generations, which has
been hindered previously as the scenario-dependence of the feedback metrics
has prevented a like-for-like comparison (Gregory et al., 2009).</p>
      <p>C4MIP will use partially coupled simulations to isolate and quantify the
sensitivity of carbon cycle components to climate and CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> separately
and also the potentially large non-linear combination of these two
components (Gregory et al., 2009; Schwinger et al., 2014). Simulations with
only the carbon cycle model components experiencing rising CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
(biogeochemically (BGC) coupled) and the radiation model components experiencing rising
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> (radiatively (RAD) coupled) are used to quantify the carbon-concentration and
carbon–climate feedbacks. Spatial patterns of these metrics can also be
calculated (e.g. Roy et al., 2011; or Fig. 6.22 of the last IPCC WG1
assessment report Ciais et al., 2013) to establish areas of model agreement
or disagreement.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS2">
  <title>Evaluation of global carbon cycle models</title>
      <p>The historical simulations will be used for evaluation of the components of
the carbon cycle (ocean and terrestrial carbon fluxes, anthropogenic carbon
storage in the ocean, atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> growth rate and variability).
ESMs have increased rapidly in complexity but evaluation has not kept pace.
Some evaluation of the carbon cycle was already performed in CMIP5 (e.g.
Anav et al., 2013; Bopp et al., 2013; Hoffman et al., 2014), highlighting
significant biases in key quantities in many ESMs. There is increasing need
to develop evaluation techniques and activities, applied consistently and
routinely across models, at both fine scales (process-level, “bottom-up”
evaluation) and large scales (system-level, “top-down” evaluation”), as
well as using complementary data streams relating to (bio)physical and
biogeochemical processes to evaluate the ensemble of simulated processes
(e.g. Luo et al., 2012; Foley et al., 2013).</p>
      <p>Evaluation of ocean carbon cycle components of ESMs has been classically
based on the use of the monthly surface <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> climatology of Takahashi
et al. (2009), derived from more than 3 million in situ ocean <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
measurements, as in Pilcher et al. (2015) for an evaluation of <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
seasonality of the CMIP5 ESMs. This evaluation is complemented by the use of
additional climatological gridded products, as in Anav et al. (2013), with
model–data comparison for related physical variables (e.g. mixed layer
depth) or biological variables (e.g. net primary production). In the past
few years, ESM evaluation has extended in many directions, making use of
advanced observation-based gridded products (e.g. the three-dimensional
distribution of anthropogenic carbon in the ocean from Khatiwala et al., 2013) and ocean databases with millions of in situ point measurements
(e.g. with the Surface Ocean CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> Atlas (SOCAT) as in Tjiputra et al. (2014) for CMIP5 ESMs), or developing new techniques for model–data
comparisons (e.g. water-mass framework; Iudicone et al., 2011).</p>
      <p>In the coming years, the increasing complexity of marine biogeochemical
schemes used in ESMs will call for more advanced model–data comparison
strategies. These will include the use of new data sets, such as biomass
data for plankton functional types (MAREDAT; Buitenhuis et al., 2013) or
ocean distribution of the micro-nutrient iron (Tagliabue et al., 2012).</p>
      <p>Evaluations of land surface components of ESMs have often used gridded flux
products (e.g. Bonan et al., 2011; Anav et al., 2013; Piao et al., 2013)
obtained by extrapolating the FLUXNET measurement network of
biosphere–atmosphere exchanges (e.g. Jung et al., 2011), for instance to
constrain modelled spatial and seasonal distribution of gross primary
production (GPP). Such products are convenient for such model evaluations
because those are available at a resolution comparable to that of the models
and because they retain the pertinent patterns of the observed fluxes while
abstracting from measurement noise, local site representativeness and other
possible site-specific features. Yet it is important to bear in mind the
limitations of the “upscaled” flux and stock products and to tailor the
model evaluation to robust patterns that the individual products are ideally
suited for. Insights may also be gained from evaluation of functional
patterns and sensitivities to certain climate forcing variables. For example
the spatial sensitivity of GPP with mean annual precipitation in the
water-limited domain, and the temperature sensitivity of ecosystem
respiration (Mahecha et al., 2010).</p>
      <p>While data-model comparisons of fluxes are important, they alone cannot
constrain longer-term dynamics and associated climate–carbon cycle
feedbacks. In addition, consideration of residence times is crucial, which
together with carbon fluxes jointly determine the stores. Analysis of CMIP5
ESMs revealed unacceptably large errors in land carbon stores (both in
living biomass and soil organic matter) (Anav et al., 2013). Future
simulation results were found to depend on the initial conditions as well as
the model sensitivity to changes (Todd-Brown et al., 2014) and therefore
better evaluation and constraint of carbon stores is seen as vital. Xia et al. (2013) showed the importance of residence time in determining carbon
stores and Carvalhais et al. (2014) showed the mismatch between CMIP5 ESMs
and an observationally derived data set of land-carbon residence times. As
more observations become available (Saatchi et al., 2011; Baccini et al.,
2012; Avitabile et al., 2015; FAO, 2012; Batjes et al., 2012; Hengl et al.,
2014) as well as data constrained products such as residence time (Bloom et
al., 2016), we stress the importance of rapid development and application of
evaluation techniques to ESMs.</p>
      <p>Carbon isotopes (carbon-13 and carbon-14) provide unique insights into the
mechanisms and timescales of carbon cycling. Differences between the
isotopic fractionation of carbon from dissolution in the ocean and from
photosynthetic assimilation on land have enabled atmospheric observations of
the <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn>13</mml:mn></mml:msup></mml:math></inline-formula>C <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn>12</mml:mn></mml:msup></mml:math></inline-formula>C ratio (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C) in atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> to
be used in differentiating land and ocean carbon fluxes (Ciais et al., 1995;
Joos et al., 1998; Rubino et al., 2013). The perturbation of the <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn>14</mml:mn></mml:msup></mml:math></inline-formula>C <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> C
ratio (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mn>14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C) in atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> from nuclear weapons
testing in the 1950s and 60s has provided a valuable tracer of carbon
turnover rates in terrestrial carbon pools (Trumbore, 2000; Naegler and
Levin, 2009), and the rates of air–sea exchange and ocean mixing, including
constraints on ocean CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> uptake (Matsumoto et al., 2004; Sweeney et
al., 2007; Graven et al., 2012). Integration of carbon isotopes into ESMs is
an emerging activity and we request the reporting of carbon isotopic
variables for the first time in C4MIP. Carbon isotopes are also included in
OMIP (Orr et al., 2016). ESMs that simulate carbon isotopes are requested to
report fluxes and stocks of carbon isotopes in their land and ocean
components. This will enable comparison between models currently simulating
carbon isotopes and their evaluation by observations, as well as encourage
future development of carbon isotopes in ESMs. Simulation of carbon isotopes
in C4MIP is expected to provide novel insights on ocean mixing and air–sea
exchange, marine ecosystem change, plant water use efficiency and stomatal
closure especially during drought periods, and terrestrial carbon residence
times.</p>
      <p>Historical simulations will be needed to explore potential emergent
constraints from observations on the future response of the carbon cycle,
with a particular focus on carbon cycle feedbacks. Recent studies showed the
potential of observed interannual CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> variability to constrain the
future tropical land carbon cycle sensitivity to climate change (Cox et al.,
2013; Wenzel et al., 2014).</p>
      <p>In the same way that Earth system modelling has become an internationally
collaborative activity involving shared expertise and development of tools,
we also expect that evaluation techniques will evolve in this way. Community
evaluation activities such as ILAMB (<uri>http://www.ilamb.org/</uri>) and ESMValTool
(Eyring et al., 2016b) look likely to become increasingly useful for
addressing the complexities of multi-model ESM evaluation.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS3">
  <title>Future projections of the components of the global carbon
budget</title>
      <p>While idealized experiments are useful for intercomparison of climate–carbon
interactions across multiple models, they do not take into account the
effect of non-CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> GHGs, aerosols, and land-use change, all of which
affect the behaviour of the carbon cycle in the real world. In contrast, the
scenarios considered by the ScenarioMIP are internally coherent in all
aspects of anthropogenic forcings. Within each socio-economic storyline,
changes in fossil fuel CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions are consistent with those in
aerosols emissions, N deposition, and changes in land-use areas, all of
which are based on plausible assumptions of demographic and economic
development in the future. This plausibility is of special interest to
policymakers. Scenarios also indicate the range of possible future
developments and opportunities for mitigation and adaptation; this
information is used widely in climate impact analyses.</p>
      <p>The scenario simulations, therefore, provide more realistic conditions
compared to the idealized 1 % experiments due to their plausibility of
anthropogenic forcings as well as the longer timescale over which the
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> increase occurs. Since shared socio-economic pathway (SSP)
scenarios include all forcings, their climate and biogeochemical effects are
able to influence the atmosphere–surface carbon exchange for both land and
ocean components. Emission-driven historical and the future SSP5-8.5
simulations replicate a more realistic model setting where ESMs are directly
forced by anthropogenic CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions, allowing for the carbon cycle
feedbacks to impact on atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and simulated climate change.
These will be compared with the concentration-driven equivalents in
ScenarioMIP and additionally will form a baseline control experiment for
analysis of alternative future land-use scenarios in LUMIP (Lawrence et al.,
2016).</p>
      <p>The proposed biogeochemically coupled versions of the historical and future
SSP5-8.5 in Sect. 3.1, in which CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> induced warming is not accounted
for, when compared to their fully coupled versions will allow us to
investigate the effect of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> induced warming on atmosphere–land and
atmosphere–ocean CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> fluxes over the 20th and 21st century
and beyond (Randerson et al., 2015). An important objective with these
simulations will be to identify how land and ocean contributions to
feedbacks and compatible emissions evolve century by century from sustained
increases in ocean heat content and thawing of permafrost soils.</p>
      <p>ScenarioMIP (O'Neill et al., 2016) acknowledges scientific and policy
interest in a scenario with a substantial overshoot in radiative forcing
during the 21st century. As such they include a tier-2 concentration-driven
scenario called SSP5-3.4-OS: an overshoot pathway, which follows SSP5-8.5 up
to 2040, followed by aggressive mitigation to reduce emissions to zero by
about 2070, and by substantial negative global emissions thereafter. The
carbon cycle response to peak-and-decline CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> levels is likely to differ
from the response to continued strong increases in CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>. The 21st century
airborne fraction from CMIP5 models varied substantially between RCPs, with
RCP2.6 in particular having a much lower airborne fraction than the 20th
century or other RCPs (Jones et al., 2013). However, to date there have been
no coordinated experiments to quantify the carbon-cycle feedback components
in such a scenario. Hence, for C4MIP we include a BGC simulation of the
SSP5-3.4-OS scenario.</p>
</sec>
</sec>
<sec id="Ch1.S2.SS3">
  <title>Links to and requirements from other MIPs</title>
      <p>The Ocean Model Intercomparison Project (OMIP; Griffies et al., 2016; Orr et
al., 2016) will provide a baseline for assessment of ocean component model
biogeochemical and historical carbon uptake fidelity. Ocean carbon cycle
analysis has previously been conducted under the OCMIP (Ocean carbon-cycle model intercomparison project) intercomparison (Orr
et al., 2001). In response to the WGCM (Working Group on Coupled Modelling) request, the OMIP and OCMIP have been
merged under the OMIP umbrella. One main objective of OMIP is to coordinate
CMIP6 ocean diagnostics including ocean physics, inert chemical tracers, and
biogeochemistry for all CMIP6 simulations that include an ocean component.
The second objective is to perform a global ocean–sea-ice simulation forced
with common atmospheric data sets. In this way, ocean models including
online biogeochemistry components will be part of “Path-II” simulation,
(whereas “Path-I” is designated to models without the biogeochemistry).
Within OMIP, ocean-only simulations will be performed as described in
Griffies et al. (2016).</p>
      <p>Analysis of changes in terrestrial carbon stocks for historical and future
scenarios as result of changes in atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, climate, and
land-use and land-use-induced land cover change (LULCC) will be done in
coordination with LUMIP (Lawrence et al., 2016). The emission-driven future
scenario performed within C4MIP serves as control simulation for LUMIP. By
replacing the LULCC forcing of SSP5-8.5 by the one from SSP1-2.6 under
otherwise identical forcings the effect of LULCC can thus be isolated. This
also implies that output provided for the emission-driven simulation should
account for the additional requirements of LUMIP such as tile-level
reporting of variables. Offline land-surface process studies form part of
LS3MIP (van den Hurk et al., 2016) and offline simulations to quantify the
contemporary land carbon budget are performed under the TRENDY
intercomparison (Sitch et al., 2015).</p>
      <p>The scientific scope of the Detection and Attribution intercomparison
(DAMIP) includes attempting some observational constraint on the transient climate response to cumulative emissions (TCRE) (Gillett et al.,
2016), whose assessment is also an important target of C4MIP. Collaborative
opportunities exist between C4MIP and DAMIP for analyses of TCRE with C4MIP
covering carbon cycle aspects of the historical runs. Furthermore, results
from DAMIP analysis runs will provide insights on the mechanism of
fluctuations of past CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> growth rate. Synergies also exist between
DAMIP and LUMIP, and also RFMIP (Radiative Forcing Model Intercomparison Project), regarding the biophysical effects of
land-use change.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>C4MIP Experiments</title>
<sec id="Ch1.S3.SS1">
  <title>Overview of simulations and their purpose</title>
      <p>The C4MIP protocol for CMIP6 builds on DECK and historical CMIP6 simulations,
which are documented in detail in Eyring et al. (2016a). The following
experiments are not formally C4MIP simulations but are considered
prerequisite simulations for C4MIP analyses:
<list list-type="bullet"><list-item><p>CMIP DECK  pre-industrial control simulation (piControl), with specified
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration (“concentration driven”).</p></list-item><list-item><p>CMIP DECK  pre-industrial control simulation (esm-piControl), with
interactively simulated atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> (“emissions driven”, but with
zero emissions).</p></list-item><list-item><p>CMIP DECK  1 % per year increasing CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> simulation (1pctCO<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>
initialized from pre-industrial CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration until quadrupling. In
C4MIP terminology this is “fully coupled” meaning that both the model's
radiation and carbon cycle components see the increasing CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
concentration.</p></list-item><list-item><p>CMIP6 concentration-driven historical simulation for 1850–2014 (historical).</p></list-item><list-item><p>CMIP6 emissions-driven historical simulation with interactively simulated
atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> (esm-hist) forced by anthropogenic emissions of
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>. Other forcings such as non-CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> GHGs, aerosols, and land-cover
change are being prescribed as in the CMIP6 concentration-driven historical
simulation.</p></list-item></list>
These simulations are documented in detail in Eyring et al. (2016a), but here
we emphasise some carbon-cycle-specific aspects and requirements.</p>
      <p>The simulations specifically identified as C4MIP simulations are separated
into two tiers. We require only a minimalistic two experiments for C4MIP
tier-1 analysis. These are
<list list-type="bullet"><list-item><p>biogeochemically coupled version of the 1 % per year increasing CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
simulation (1pctCO2-bgc);</p></list-item><list-item><p>emissions-driven future scenario based on the SSP5-8.5 scenario
(esm-ssp585).</p></list-item></list>
The rationale for these two required simulations is that they form a minimum
set of outputs required to quantify the climate–carbon cycle feedback in a
model and to simulate the full effects of this feedback on future climate
under a high-end emissions scenario. The emissions scenario also provides a
control for the LUMIP esm-ssp585-ssp126Lu simulation.</p>
      <p>Further simulations are then requested under C4MIP tier-2, which allow a more
complete investigation of the feedback components, their non-linearities,
their sensitivity to nitrogen limitations (if included in the model) and the
role of their effects on future scenarios including sustained CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
increases and a peak-and-decline in forcing. It is highly desirable that as
many of these as possible are performed to accompany the tier-1 simulations.
They are divided into two categories:
<list list-type="custom"><list-item><label>i.</label><p>Idealized simulations
<list list-type="bullet"><list-item><p>RAD version of the 1 % per year increasing CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
simulation (1pctCO2-rad);</p></list-item><list-item><p>COU (fully coupled) 1 % per year increasing CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> simulation with
nitrogen deposition (1pctCO2Ndep);</p></list-item><list-item><p>BGC version of the 1 % per year increasing
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> simulation with nitrogen deposition (1pctCO2Ndep-bgc).</p></list-item></list></p></list-item><list-item><label>ii.</label><p>Scenario simulations
<list list-type="bullet"><list-item><p>biogeochemically coupled version of the concentration-driven historical
CMIP6 simulation (hist-bgc);</p></list-item><list-item><p>biogeochemically coupled version of the concentration-driven future SSP5-8.5
scenario (ssp585-bgc);</p></list-item><list-item><p>biogeochemically coupled version of the concentration-driven future
extension of the SSP5-8.5 scenario (ssp585-bgcExt);</p></list-item><list-item><p>biogeochemically coupled version of the concentration-driven future
SSP5-3.4-over scenario (ssp534-over-bgc);</p></list-item><list-item><p>biogeochemically coupled version of the concentration-driven future
extension of the SSP5-3.4-over scenario (ssp534-over-bgcExt),</p></list-item></list></p></list-item></list></p>
      <p>Note that 1pcCO2Ndep and 1pcCO2Ndep-bgc are only applicable to models whose
simulation will be affected by the deposition of reactive nitrogen either
due to terrestrial or marine nitrogen cycle effects on carbon fluxes and
stores. Similarly, the biogeochemically forced scenario simulations
(ssp585-bgc and ssp534-over-bgc) are only required if the coupled
ScenarioMIP counterpart has been performed (ssp585 and ssp534-over). If
computing resource limits the number of simulations performed we recommend
prioritising ssp585-bgc over ssp534-over-bgc.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><caption><p>Relation of C4MIP simulations to CMIP6 DECK and historical
simulations and the ssp585 and ssp5-34-over future scenario simulation
proposed for the ScenarioMIP. Note that at the time of preparing this
manuscript the details of the SSP5-3.4-OS-Ext extension to 2300 are not
available; hence, it could not be included in the figure, but it is still
requested as a C4MIP tier-2 simulation.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f01.png"/>

        </fig>

      <p>The simulations required for C4MIP are summarized in Table 1 and the
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration is shown schematically in Fig. 1 in the context of
the CMIP6 DECK, historical simulations, and the ssp585 future scenario, which is a
tier 1 experiment of the ScenarioMIP (O'Neill et al., 2016). Table 2 shows
the main simulations from other MIPs, which form crucial counterparts to
C4MIP simulations. The rest of this section documents detailed instructions
on how to set up and perform the C4MIP simulations. Detailed definitions of
the output requirements are listed in Sect. 4.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><caption><p>Summary of the C4MIP tier-1 and tier-2 simulations.
Simulations can be “concentration driven” or “emissions driven” as described in the
text. Coupling mode refers to which model components see changes in atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="56.905512pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="85.358268pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="56.905512pt"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="56.905512pt"/>
     <oasis:colspec colnum="5" colname="col5" align="justify" colwidth="56.905512pt"/>
     <oasis:colspec colnum="6" colname="col6" align="justify" colwidth="85.358268pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Category</oasis:entry>  
         <oasis:entry colname="col2">Type of scenario</oasis:entry>  
         <oasis:entry colname="col3">Emission or<?xmltex \hack{\hfill\break}?>concentration driven</oasis:entry>  
         <oasis:entry colname="col4">Coupling mode</oasis:entry>  
         <oasis:entry colname="col5">Simulation years</oasis:entry>  
         <oasis:entry colname="col6">Short name</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Tier 1</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">1 %BGC</oasis:entry>  
         <oasis:entry colname="col2">Idealized 1 % per year CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> only, BGC mode</oasis:entry>  
         <oasis:entry colname="col3">C driven</oasis:entry>  
         <oasis:entry colname="col4">CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> affects <?xmltex \hack{\hfill\break}?>BGC</oasis:entry>  
         <oasis:entry colname="col5">140</oasis:entry>  
         <oasis:entry colname="col6">1pctCO2-bgc</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">SSP5-8.5</oasis:entry>  
         <oasis:entry colname="col2">SSP5-8.5 up to 2100</oasis:entry>  
         <oasis:entry colname="col3">E driven</oasis:entry>  
         <oasis:entry colname="col4">Fully coupled</oasis:entry>  
         <oasis:entry colname="col5">85</oasis:entry>  
         <oasis:entry colname="col6">esm-ssp585</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Tier 2</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">1 %RAD</oasis:entry>  
         <oasis:entry colname="col2">Idealized 1 % per year CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> only, RAD mode</oasis:entry>  
         <oasis:entry colname="col3">C driven</oasis:entry>  
         <oasis:entry colname="col4">CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> affects RAD</oasis:entry>  
         <oasis:entry colname="col5">140</oasis:entry>  
         <oasis:entry colname="col6">1pctCO2-rad</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">1 %COU-Ndep</oasis:entry>  
         <oasis:entry colname="col2">Idealized 1 % per<?xmltex \hack{\hfill\break}?>year CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> only, fully <?xmltex \hack{\hfill\break}?>coupled, increasing<?xmltex \hack{\hfill\break}?>N-deposition</oasis:entry>  
         <oasis:entry colname="col3">C driven</oasis:entry>  
         <oasis:entry colname="col4">Fully coupled</oasis:entry>  
         <oasis:entry colname="col5">140</oasis:entry>  
         <oasis:entry colname="col6">1pctCO2Ndep</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">1 %BGC-Ndep</oasis:entry>  
         <oasis:entry colname="col2">Idealized 1 % per year CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> only, BGC mode, increasing<?xmltex \hack{\hfill\break}?>N-deposition</oasis:entry>  
         <oasis:entry colname="col3">C driven</oasis:entry>  
         <oasis:entry colname="col4">CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> affects BGC</oasis:entry>  
         <oasis:entry colname="col5">140</oasis:entry>  
         <oasis:entry colname="col6">1pctCO2Ndep-bgc</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Hist/SSP5-8.5-BGC</oasis:entry>  
         <oasis:entry colname="col2">Historical<inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>SSP5-8.5 up to<?xmltex \hack{\hfill\break}?>2300, BGC mode</oasis:entry>  
         <oasis:entry colname="col3">C driven</oasis:entry>  
         <oasis:entry colname="col4">CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> affects BGC</oasis:entry>  
         <oasis:entry colname="col5">165 <?xmltex \hack{\hfill\break}?>85 <?xmltex \hack{\hfill\break}?>200</oasis:entry>  
         <oasis:entry colname="col6">hist-bgc, ssp585-bgc<?xmltex \hack{\hfill\break}?>and ssp585-bgcExt</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">SSP5-3.4-Overshoot-BGC</oasis:entry>  
         <oasis:entry colname="col2">SSP5-3.4-OS up to<?xmltex \hack{\hfill\break}?>2300 in BGC mode</oasis:entry>  
         <oasis:entry colname="col3">C driven</oasis:entry>  
         <oasis:entry colname="col4">CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> affects BGC</oasis:entry>  
         <oasis:entry colname="col5">60 (from 2040–2100) <?xmltex \hack{\hfill\break}?>200</oasis:entry>  
         <oasis:entry colname="col6">ssp534-over-bgc, ssp534-over-bgcExt</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><caption><p>Summary of key simulations from CMIP6 DECK, historical or other
MIPs on which C4MIP analysis will rely. The emissions-driven control and historical runs in particular are entry card requirements for C4MIP.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="56.905512pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="71.13189pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="71.13189pt"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="170.716535pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Type of<?xmltex \hack{\hfill\break}?>simulation</oasis:entry>  
         <oasis:entry colname="col2">Simulation name</oasis:entry>  
         <oasis:entry colname="col3">Owning MIP</oasis:entry>  
         <oasis:entry colname="col4">Notes</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Control</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry rowsep="1" colname="col2">piControl</oasis:entry>  
         <oasis:entry rowsep="1" colname="col3">DECK</oasis:entry>  
         <oasis:entry rowsep="1" colname="col4">Prescribed pre-industrial CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">esm-piControl</oasis:entry>  
         <oasis:entry colname="col3">DECK</oasis:entry>  
         <oasis:entry colname="col4">Prognostically simulated atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration; required if performing any emissions-driven simulations for C4MIP</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Idealized</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">1pctCO2</oasis:entry>  
         <oasis:entry colname="col3">DECK</oasis:entry>  
         <oasis:entry colname="col4">Forms essential counterpart for C4MIP BGC and RAD 1 % simulations</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Historical</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry rowsep="1" colname="col2">historical</oasis:entry>  
         <oasis:entry rowsep="1" colname="col3">CMIP6 historical</oasis:entry>  
         <oasis:entry rowsep="1" colname="col4"/>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">esm-hist</oasis:entry>  
         <oasis:entry colname="col3">CMIP6 historical</oasis:entry>  
         <oasis:entry colname="col4">Prognostically simulated atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration; required if performing any emissions-driven simulations for C4MIP; provides starting point for C4MIP emissions-driven SSP5-8.5</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Future<?xmltex \hack{\hfill\break}?>scenarios</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry rowsep="1" colname="col2">ssp585, ssp585ext</oasis:entry>  
         <oasis:entry rowsep="1" colname="col3">ScenarioMIP</oasis:entry>  
         <oasis:entry rowsep="1" colname="col4">Essential counterpart for SSP5-8.5-BGC de-coupled simulation and its extension to 2300</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry rowsep="1" colname="col2">ssp534-over, ssp534-over -ext</oasis:entry>  
         <oasis:entry rowsep="1" colname="col3">ScenarioMIP</oasis:entry>  
         <oasis:entry rowsep="1" colname="col4">Essential counterpart for SSP5-3.4-over-bgc de-coupled simulation and its extension to 2300; branches from SSP5-8.5 at 2040</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">esm-ssp585-ssp126Lu</oasis:entry>  
         <oasis:entry colname="col3">LUMIP</oasis:entry>  
         <oasis:entry colname="col4">Same as esm-ssp585 except uses SSP1-2.6 land use (afforestation scenario)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S3.SS2">
  <title>Experimental details</title>
<sec id="Ch1.S3.SS2.SSS1">
  <title>Model requirements and spin-up</title>
      <p>To participate in C4MIP a climate model must have the capability to run with
an interactive carbon cycle. This means it must simulate both terrestrial
and marine carbon cycle processes, and it must simulate the exchange of
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> between the land/ocean and the atmosphere in order to
prognostically simulate the evolution of atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>. Some C4MIP
simulations prescribe a concentration of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> in the atmosphere as a
boundary condition and simulate the changes in carbon fluxes and stores in
response. Other simulations prescribe emissions of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> to the
atmosphere (from human activity) as an external forcing and require the
model to also simulate the evolution of atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>. A model must
be able to run in both these configurations in order to perform the C4MIP
simulations. The evolution of atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration can be
simulated by assuming that CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> is completely well mixed with the same
globally averaged concentration everywhere in space or by transporting
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> as a three-dimensional tracer. This choice is up to the modelling
groups. Throughout this document we refer to the former – prescribing
atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration as a boundary condition – as a
“concentration-driven” simulation, and the latter – prescribing emissions
and in turn simulating the CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration – as an “emissions
driven” simulation. IPCC AR5 WG1 Ch.6 Box 6.4 described the use of these
configurations in some detail (Ciais et al., 2013). Figure 6.4 from that Box
is reproduced here for reference (Fig. 2). Although the same terminology
(concentration-driven or emissions-driven) can be applied to aerosols or
non-CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> GHGs this paper focuses only on CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><caption><p>Schematic representation of carbon cycle numerical experimental
design. Concentration-driven (left) and emissions-driven (right) simulation
experiments make use of the same Earth system models (ESMs), but configured
differently. Concentration-driven simulations prescribe atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
as a pre-defined input to the climate and carbon cycle model components.
Compatible emissions can be calculated from the output of the
concentration-driven simulations. Emissions-driven simulations prescribe
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions as the input, and atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> is an internally
calculated state variable within the ESM. Adapted from Ciais et al. (2013).
Solid arrows depict internal data flow within the model, dashed arrows
depict data output from the model.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f02.png"/>

          </fig>

      <p>Before beginning the simulations described below, a model must be spun-up to
eliminate any long-term drift in carbon stores or fluxes. Indeed, it has been
shown recently that the large diversity in spin-up protocols used for marine
biogeochemistry in CMIP5 ESMs contribute to large model-to-model differences
in simulated fields, and that drifts have potential implications on model
performance assessments in addition to possibly aliasing estimates of climate
change impacts (Séférian et al., 2016). Separate spin-up simulations
should be performed for both concentration-driven and emission-driven
configurations. There are many possible techniques to ensure that a model's
carbon fluxes and pools exhibit minimal drift. These include simply
performing very long simulations, running components offline from the coupled
system, numerical acceleration techniques or semi-analytical schemes such as
described by Xia et al. (2012). The choice of technique is up to the
modelling groups and there is no requirement to submit data from the spin-up
period, but a proper documentation of the spin-up technique and duration is
required. The test of whether a model is spun-up properly and exhibits
minimal drift will be based on the performance of the piControl simulation.
It is suggested that the model first be spun-up in concentration-driven mode
and this state can be used as an initial basis for the emission-driven
spin-up.</p>
      <p>Our definition of an acceptably small drift in a properly spun-up model is
that land, ocean, and atmosphere carbon stores each vary by less than 10
PgC/century (i.e., a long-term average <inline-formula><mml:math display="inline"><mml:mo>≤</mml:mo></mml:math></inline-formula> 0.1 PgC yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). This is broadly
equivalent to an atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> drift of less than about 5 ppm/century. We suggest that a drift smaller than this value is highly
desirable but this value is a guideline. Exceeding this drift in the control
run may preclude a model from being included in a C4MIP analysis, but we
would expect that decision to be made on a case-by-case basis. For example,
a large ocean drift in a concentration-driven experiment may not preclude
analysis of land carbon fluxes and vice-versa. We also stress that being
within these drifts is a minimum but not necessarily sufficient quality
condition. Regional patterns and drifts of stores and fluxes will also be
assessed and depending on the analysis may preclude inclusion of a given
model's results.</p>
      <p>For simulations of carbon isotopes, spin-up times of many thousands of years
or the use of an equivalent fast spin-up technique may be required to
eliminate drift, particularly for carbon-14 in ocean carbon and soil carbon.
The spin-up technique is left to the modellers' discretion.</p>
</sec>
<sec id="Ch1.S3.SS2.SSS2">
  <title>DECK piControl and historical</title>
      <p>The pre-industrial control run (piControl) is a required simulation of the
CMIP DECK, and a prerequisite simulation for participating in C4MIP.
The run begins from a spun-up state as described above and all forcings
should continue to be applied as per the spin-up. The global land and ocean
carbon stores should not drift by more than 10 PgC/century each. The length
of the pre-industrial control run should be at least equal to any simulation
for which it will serve as the control simulation thereby allowing
correction for model drift. The piControl run must be run for both
concentration-driven and emission-driven configurations of the model. In
both cases all forcings should be held constant at pre-industrial levels as
described in the CMIP DECK documentation. The only difference between
concentration-driven and emission-driven control runs is that the
emission-driven simulation simulates atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> internally in
response to natural fluxes of carbon from land and ocean, whereas in the
concentration-driven case atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration is specified.
No anthropogenic fossil fuel emissions of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> should be applied to the
model during this control run, and fixed pre-industrial land-use should be
imposed. The simulated atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> in esm-piControl should
therefore remain stable, with drifts below 5 ppm/century.</p>
      <p>The CMIP6 historical run, a CMIP6 required simulation, must be performed in
both concentration-driven and emission-driven configurations for
participation in C4MIP. It is expected that the historical simulation would
begin from the same starting point as the pre-industrial control run
(Fig. 3). This nominally is set as 1 January 1850. We note though that this
neglects the small but non-zero effect of pre-1850 land-use changes (see
e.g., Pongratz et al., 2009; Sentman et al., 2011). Some modelling groups
might therefore opt for an earlier starting date or perform additional
offline land-surface simulations in order to account for pre-1850 land cover
change. This would mean though that the control and historical simulations
begin from different states and with different trends and this should
therefore be very clearly documented. The protocol for the historical
simulation is documented in detail in the CMIP6 paper (Eyring et al., 2016a).
Here we stress the need for the emission-driven historical run (esm-hist) to
also be performed as an “entry card” for C4MIP. The only difference between
concentration-driven and emission-driven simulations is the treatment of
atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>. All other forcings must be identical in both
simulations. The concentration-driven simulation will use historical
atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration provided by CMIP6.</p>
      <p>The emission-driven simulation will use anthropogenic CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions
documented here. Model groups have a choice over the treatment of land-use
forcing as described below.
<list list-type="bullet"><list-item><p>Fossil fuel emissions: CMIP6 will provide gridded, annual CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions
from burning of fossil fuels, from the beginning of 1850 to the end of 2014
for the historical simulation and through to the end of 2100 for ssp5-8.5.
See Sect. 3.3.1.</p></list-item><list-item><p>Land-use carbon emissions: there are two allowable options:
<list list-type="bullet"><list-item><p>If possible, drive the model with the CMIP6 land-use forcing (Hurtt et al.,
2016; <uri>http://luh.umd.edu/_LUH2/LUH2_1.0h/</uri>) and the model simulates its own CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions (including both
from deforestation and uptake from regrowth) to/from the atmosphere as an
internal process. In this case the only external input of carbon to the
system is fossil fuel emissions.</p></list-item><list-item><p>If that is not possible for the model, then C4MIP will provide land-use
carbon emissions; see Sect. 3.3.1.</p></list-item></list></p></list-item></list></p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S3.SS2.SSS3">
  <?xmltex \opttitle{Idealized 1\,{\%} simulations}?><title>Idealized 1 % simulations</title>
      <p>A concentration-driven simulation with a 1 % per year increase in
atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration beginning from pre-industrial is a
required simulation of the DECK. In C4MIP there are further variants of this
1 % simulation designed to quantify the concentration-carbon and
climate–carbon feedback parameters (Friedlingstein et al., 2006; Arora et
al., 2013).</p>
      <p>The tier-1 C4MIP simulation 1pctCO2-bgc requires the simulation to be
repeated but with a change to the model set-up such that only the model's
carbon cycle components (both land and ocean) respond to the increase in
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, whereas the model's radiation code uses a constant, pre-industrial
concentration of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>. This simulation was previously known as
“Uncoupled” in Friedlingstein et al. (2006), and was re-named
“Biogeochemically coupled” by Gregory et al. (2009). All other forcings
must be identical to the DECK 1pctCO2 simulation.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p>Schematic representation of model spin-up followed by control and
historical simulations through 2014. The interactive CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> pre-industrial
control should ideally have a drift of less than 5 ppm/century.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f03.png"/>

          </fig>

      <p>A tier-2 C4MIP simulation 1pctCO2-rad is the counterpart of 1pctCO2-bgc. It
requires the simulation to be repeated but with a change to the model set-up
such that only the model's radiation code sees the increase in CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and
the model's carbon cycle components (both land and ocean) see a constant,
pre-industrial concentration of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>. This simulation was not performed
in Friedlingstein et al. (2006), and was termed “Radiatively coupled” by
Gregory et al. (2009). All other forcings must be identical to the DECK
1pctCO2 simulation. Although this simulation is in tier-2 we strongly
encourage all modelling groups to perform it as the non-linearities of
biogeochemical and radiative response can be large (e.g. Schwinger et
al., 2014).</p>
      <p>For models with a nitrogen cycle, there are two further 1 % simulation
variants requested as C4MIP tier-2: 1pctCO2Ndep and 1pctCO2Ndep-bgc. These can
be run if the model includes either land- or marine nitrogen cycle in a way
that changes carbon uptake and storage. If the input of reactive nitrogen to
the model will not affect the carbon cycle, then there is no need to perform
these simulations. If changes in nitrogen deposition will affect either land
or ocean carbon uptake then these simulations are requested. 1pctCO2Ndep
and 1pctCO2Ndep-bgc are parallel to the 1pctCO2 and 1pctCO2-bgc simulations but
with the addition of a time-varying deposition of reactive nitrogen (see
Sect. 3.3.3).</p>
</sec>
<sec id="Ch1.S3.SS2.SSS4">
  <title>Scenario simulations</title>
      <p>Concentration-driven scenario simulations, which follow on from the end of
the concentration-driven historical simulation, are performed under
ScenarioMIP. In C4MIP we request simulations that complement some of these.</p>
      <p>Under C4MIP tier-1, we request an emission-driven esm-ssp585 simulation, which
parallels the ScenarioMIP concentration-driven SSP-5-8.5 simulation. This
simulation should begin from the end point of the emissions-driven
historical simulation (1 January  2015). As with the historical
simulation the only difference from the concentration-driven counterpart
should be the treatment of atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, which is simulated within
the model driven by prescribed emissions. SSP8.5 gridded fossil fuel
emissions will be provided as will SSP8.5 land-use forcing and land-use
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions. Models should implement these in the scenario run in
exactly the same manner as they did in the emission-driven historical
simulation.</p>
      <p>Under C4MIP tier-2, we also request a biogeochemically coupled (BGC)
version of the concentration-driven SSP5-8.5, ssp585-bgc and ssp585-bgcExt.
As with the 1pctCO2-bgc simulation, this run should be performed with only
the carbon cycle components (land and ocean) seeing the prescribed increase
in atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>. The model's radiation scheme should see fixed
pre-industrial CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>. All other non-CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> forcings should be applied
in an identical way to the ScenarioMIP SSP5-8.5 and SSP5-8.5ext simulations.
If possible this simulation should be extended to 2300, as should its
counterpart from ScenarioMIP, as one of the priority focus areas for
analysis is on long-term processes such as ocean carbon and heat uptake and
permafrost loss (e.g., Randerson et al., 2015).</p><?xmltex \hack{\newpage}?>
</sec>
</sec>
<sec id="Ch1.S3.SS3">
  <title>Forcings and inputs</title>
<sec id="Ch1.S3.SS3.SSS1">
  <?xmltex \opttitle{CO${}_{{2}}$ concentrations and anthropogenic CO${}_{{2}}$ emissions}?><title>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations and anthropogenic CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions</title>
      <p>For concentration-driven simulations, atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> should be
prescribed as a globally well-mixed value provided by CMIP6. The CMIP6 paper
(Eyring et al., 2016a) and a range of papers in the <italic>GMD</italic> CMIP6
Special Issue will document the forcings in more detail. The data will be
made available from the CMIP6 and PCMDI webpages
(<uri>http://www.wcrp-climate.org/wgcm-cmip/wgcm-cmip6</uri>,
<uri>https://pcmdi.llnl.gov/search/input4mips</uri>). For emissions-driven
simulations, atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> should be simulated prognostically by the
model. External boundary conditions of anthropogenic CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions will
be provided and should be used as follows:
<list list-type="bullet"><list-item><p>In esmPIcontrol, the emissions-driven control run, atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
should be simulated by the model but no external emissions should be added
during this simulation.</p></list-item><list-item><p>Fossil fuel emissions should be used for the emissions-driven historical and
future scenario simulations. C4MIP will provide gridded, annual CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
emissions from burning of fossil fuels, from the beginning of 1850 to the
end of 2014 for the historical simulation and through to the end of 2100 for
ssp5-8.5. They will be provided on land points on a 1<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula>
1<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> grid. It is up to model groups to re-grid or interpolate these
emissions to suit their own model. Global annual totals must be conserved
and must match the global annual totals of the gridded data provided.
Conserving the global annual total is more important than the spatial
patterns of emissions.</p></list-item><list-item><p>C4MIP strongly recommends that land-use carbon emissions are simulated
internally by applying the land-use forcing by Hurtt et al. (2016). In the
event that this is not possible in a model, C4MIP will provide annual
land-use carbon emissions mainly based on the results of two bookkeeping
models: BLUE (Hansis et al., 2015) and Houghton (Houghton et al., 2012). For
the years 1850 to 2010 the average result of these two bookkeeping models
defines the global emission rate, whereas the spatial distribution of the
emissions is taken solely from BLUE at a 0.5<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution. This
approach provides input emissions more spatially consistent with the
land-use forcing applied to models than population-weighted spatial patterns
used in CMIP5. For the years 2010 to 2014 the global land-use emission rate
is specified by the Global Carbon Project (Le Quéré et al., 2015)
and the spatial pattern is that of BLUE at the year 2010. At the time of
writing this C4MIP protocol, future land-use scenarios have not yet been
processed within LUH2. Our intention is that for the future scenarios we
will provide gridded land-use emissions using global totals from the
scenario and the spatial pattern either provided from the scenario or from
the BLUE spatial pattern for 2010. As with fossil fuel emissions, it is up to
model groups to re-grid or interpolate these emissions to suit their own
model. Global annual totals must be conserved and must match the global
annual totals of the gridded data provided.</p></list-item></list></p>
</sec>
<sec id="Ch1.S3.SS3.SSS2">
  <title>Land-use and land-use-induced land cover change</title>
      <p>LULCC affects climate via two aspects in CMIP6 simulations. In both
concentration-driven and emission-driven simulations LULCC alters the
distribution of vegetation covering the land surface, with consequences for
the exchange of heat, water, and momentum with the atmosphere. Its effects
on terrestrial carbon stocks allow us to infer LULCC emissions, more
accurately labelled the “et LULCC flux” (Brovkin et al., 2013). In
emission-driven simulations the net LULCC flux influences the atmospheric
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration, contributing to subsequent carbon cycle feedbacks
(e.g., Strassmann et al., 2008; Arora and Boer, 2010; Pongratz et al.,
2014).</p>
      <p>The LULCC forcing for the historical simulations will be based on the
protocol and forcing data provided by CMIP6 for the DECK and the historical
CMIP6 simulations. LULCC is kept fixed at its pre-industrial state for all
1pctCO2 simulations (fully coupled, biogeochemically and radiatively coupled
versions). It is essential that the biogeochemically coupled simulations
required for C4MIP of the historical and future SSP simulations and their
extensions to 2300 use identically the same LULCC forcing as for the
parallel ScenarioMIP simulations.</p>
</sec>
<sec id="Ch1.S3.SS3.SSS3">
  <title>N deposition</title>
      <p>Models including a nitrogen cycle are encouraged to use a consistent set of
forcings of anthropogenic nitrogen deposition as drivers for the respective
ocean and land biogeochemical components. Rates of speciated nitrogen
deposition at the land and ocean surface are not available from observations
and so need to be determined by models. C4MIP will coordinate with CCMI to
provide gridded, time-varying fields of nitrogen deposition from chemistry
transport models (CTMs) for use as driving inputs in C4MIP simulations
(<uri>http://www.met.reading.ac.uk/ccmi/?page_id=375</uri>). This will
be provided partitioned into four categories of wet or dry and oxidized or
reduced N deposition velocities at the bottom of the atmosphere. If a model
requires more or fewer categories or species of nitrogen deposition then it
is up to the model group to produce these. When aggregating or
disaggregating components of deposition the total amount of reactive
nitrogen should be conserved. Inputs into the land biosphere depend on
vegetation characteristics, and these aspects should be dealt with by the
individual model groups.</p>
      <p>C4MIP simulations should use N deposition fields as follows:
<list list-type="bullet"><list-item><p>Pre-industrial control (piControl and esm-piControl) should use
time-invariant, but spatially explicit, N deposition appropriate to 1850.
This is so that there are no discontinuities in carbon pools or fluxes at
the beginning of the historical simulation.</p></list-item><list-item><p>Historical (historical, esm-hist, hist-bgc) and future scenarios
(esm-ssp585, ssp585-bgc, ssp585-bgcExt, ssp534-over-bgc, ssp534-over-bgcExt)
should use the provided time-varying N-deposition data derived from CTM
simulations. It is essential that all C4MIP simulations use identically the
same N-deposition fields for the C4MIP simulations as the parallel DECK,
historical and ScenarioMIP simulations.</p></list-item><list-item><p>The idealized simulations (1pctCO2, 1pctCO2-bgc, 1pctCO2-rad) should also
use the time-invariant pre-industrial N deposition as used in the control
runs, as CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> is the only time-varying forcing in these experiments.</p></list-item><list-item><p>For the first time, C4MIP requests additional idealized simulations
(1pctCO2Ndep, 1pctCO2Ndep-bgc) designed to quantify the effect of N
deposition on the carbon–climate and carbon-concentration interactions.
These simulations should use an idealized scenario of time-varying N
deposition as follows. A scenario will be generated by adding to the
pre-industrial base-line the geographically explicit difference between the
year 2100 SSP5-8.5 N deposition scenario and pre-industrial values, such
that the relative growth rates of N deposition and CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> match and the
global total N deposition at the time when atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
concentrations reach the SSP5-8.5 value for the year 2100 correspond to the
year 2100 N deposition total. C4MIP will generate these fields of N
deposition and make them available as annual fields to be applied in these
idealized simulations.</p></list-item></list></p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><caption><p>Carbon isotopes in atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> for the historical period
1850–2014. Data for <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C is from Law Dome, South Pole (Rubino et
al., 2013), and Mauna Loa (Keeling et al., 2001) and includes smoothing of
the observations. Data for <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mn>14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C are compiled from Levin et
al. (2010) and other sources (I. Levin, personal communication, 2016),
following a similar data set used by Orr et al. (2000).</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f04.pdf"/>

          </fig>

      <p>If the ESM simulates atmospheric chemistry and composition and therefore
provides N deposition internally, then this can be used in place of a
prescribed field of N deposition for the control, historical, and scenario
simulations. However, irrespective of whether an ESM generates N deposition
or not, for the 1 % idealized simulations, it is preferable to use the
provided fields as anomalies, which should be added to the ESM's
pre-industrial N-deposition fields.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><caption><p><bold>(a)</bold> Requested tier-1 and tier-2 variables representing land carbon
pools. Although not a land carbon quantity, atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> is shown
here for completeness. <bold>(b)</bold> Detailed view of the tier-2 breakdown for soil
carbon by vertical level (cSoilLevels) and by soil carbon pool (cSoilPools).</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f05.png"/>

          </fig>

      <p>The provided N-deposition data will cover both land and ocean, but we
acknowledge that some models have their own established sources of reactive
nitrogen to the oceans and to change this would require costly repeat-spinup
simulations. So it is left to the model groups' discretion how to apply
N deposition to the ocean. If a source other than that provided by C4MIP is used
this should be documented and made available to aid analyses.</p>
</sec>
<sec id="Ch1.S3.SS3.SSS4">
  <title>Carbon isotopes</title>
      <p>Models including carbon isotopes (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C and <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mn>14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C)
in land or ocean realms are encouraged to simulate and report variables
relating to carbon isotopes for control, historical, and future scenario
simulations.</p>
      <p>For historical concentration-driven runs (piControl, historical and
hist-bgc), atmospheric <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mn>14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
forcing based on observations will be provided (Fig. 4). The atmospheric
forcing data sets will be available at the C4MIP website. We also plan to
make available atmospheric forcing data for carbon isotopes for the ssp585
scenario and for other scenarios and extensions using a simple carbon cycle
model, following Graven (2015).</p>
      <p>Carbon isotopes are only requested to be simulated in land and ocean model
components using the provided historical or future atmospheric forcing
data sets for <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mn>14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>. It is
not requested that atmospheric <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mn>14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> be simulated by ESMs, even for emission-driven simulations
of atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>.</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S3.SS3.SSS5">
  <title>Other forcings</title>
      <p>If the model requires any other external forcing not documented here, for
example deposition of phosphorous, then it is at the model groups'
discretion how to provide it. In the case of a model with an interactive
phosphorous cycle, we recommend the forcing data are prepared in a way
analogous to the nitrogen deposition described above. We recommend modelling
groups to contact C4MIP for more details if this is applicable. Any
additional forcings must be documented through the CMIP meta-data process or
in the appropriate model description paper.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S4">
  <title>Output requirements</title>
      <p>It is vital for accurate analysis and model intercomparison that every model
adheres to the definitions of each output variable in order for a
like-for-like comparison to be made. In this section we describe in detail
each requested output variable. The data request will be documented
separately (by the WGCM Infrastructure Panel;
<uri>https://www.earthsystemcog.org/projects/wip/</uri>) and will list the required
variables output for each CMIP6 simulation along with their precise variable
names, description, and required units. Here we aim to describe each variable
so that its implementation and use are made consistent across all models and
analyses.</p>
<sec id="Ch1.S4.SS1">
  <title>Land</title>
<sec id="Ch1.S4.SS1.SSS1">
  <title>Land carbon cycle variables</title>
      <p>The primary aim of C4MIP is to compare the aspects of the global carbon
cycle and its response to environmental changes across the participating
ESMs. To achieve this objective, it is essential that all carbon stocks and
fluxes are reported so that total amount of carbon in the system can be
tracked and their conservation checked. To achieve this, compulsory tier-1
diagnostics have been defined that close the carbon cycle as simply as possible. Desirable tier-2 diagnostics should also be reported where
possible,
which allow for more detailed analysis by breaking down tier-1 output into
sub-components.</p>
</sec>
<sec id="Ch1.S4.SS1.SSSx1" specific-use="unnumbered">
  <title>Land carbon pools: tier-1</title>
      <p>Figure 5 shows the requested carbon cycle stores over land. Tier-1 variables
are intended to be simple but still capture the total land carbon store.
Tier-2 variables provide the same information as the tier-1 variables but in
more detail. As shown in Fig. 5 the total carbon can be calculated from
tier-1 variables and is not the combined sum of tier-1 and tier-2 variables.</p>
      <p>The carbon stored in the vegetation–litter–soil system is simply represented
by tier-1 variables, cVeg, cLitter, and cSoil respectively. For models that
do not represent a vertical discretization of soil carbon, all soil carbon
should be reported simply as cSoil. Additionally in tier-1 for models with
vertically discretized soil carbon, we request output on the vertical
distribution above and below 1 m depth (cSoilAbove1m, cSoilBelow1m). These
should be reported in addition to cSoil, such that
cSoil<inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula>cSoilAbove1m<inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>cSoilBelow1m. The rationale for requesting this is
the availability of several observation-based data sets that report soil
organic matter content to 1 m depth. It is important that any evaluation of
cSoil outputs against observed data sets makes use of the appropriate depth
of soil in both the observations and model outputs.</p>
      <p>A fourth pool, cProduct, represents the carbon stored in product pools (harvested wood, paper products, furniture, etc.) as a result of
anthropogenic land-use change. The total carbon stored per unit area on land
is then simply:
              <disp-formula id="Ch1.E1" content-type="numbered"><mml:math display="block"><mml:mrow><mml:mi mathvariant="normal">cLand</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">cVeg</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">cLitter</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">cSoil</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">cProduct</mml:mi></mml:mrow></mml:math></disp-formula>
            Some models may not explicitly simulate a litter pool distinct from their
soil carbon pool. In this case cLitter should be reported as zero. We would
normally expect cProduct to be non-zero in simulations that include
anthropogenic land-use or land-use change. Hence, for the idealized 1 %
per year increasing CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> simulations (biogeochemically, radiatively or
fully coupled) we would expect models to report cProduct <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0. For models
whose land-use fluxes contribute straight to the atmosphere and/or to their
litter or soil carbon pools, but not to the product pools, cProduct <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0
should also be reported for historical and scenario simulations. Obviously,
for models that do not simulate the effect of LULCC on the carbon cycle,
cProduct will also be expected to be zero.</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S4.SS1.SSSx2" specific-use="unnumbered">
  <title>Land carbon pools: tier-2 vegetation and litter carbon</title>
      <p>Tier-2 output variables allow for more detailed breakdown and analysis of
their parent carbon stores. They are sub-components of their parent tier-1
variables, and not additional stores. For example, the vegetation carbon
pool can be represented by carbon in the leaf, stem, and root as well as possibly
other (e.g. fruit) components. For models that report these tier-2
variables, the total amount of carbon per unit area should be identical to
the tier-1 variable, i.e.
              <disp-formula id="Ch1.E2" content-type="numbered"><mml:math display="block"><mml:mrow><mml:mi mathvariant="normal">cVeg</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">cLeaf</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">cStem</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">cRoot</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">cOther</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            The same applies for the litter carbon pool, which is requested to be broken
down into coarse woody debris (cLitterCWD) and above- and below-surface
litter (cLitterSurf, cLitterSubSurf) pools. When a model has a continuous
profile of litter with depth, take above and below 10 cm as the definition of
above and below the surface. CWD here is assumed to be on the surface.</p>
</sec>
<sec id="Ch1.S4.SS1.SSSx3" specific-use="unnumbered">
  <title>Land carbon pools: tier-2 soil carbon</title>
      <p>For CMIP5 the soil carbon pool was requested to be divided into components
with fast, medium, and slow turnover timescales. However, this distinction
was not found useful by the community and as a result was not used in many
analyses. For CMIP6, we request a breakdown in two different ways (Fig. 5b). First, models with a vertical structure to their soil carbon are
requested to report total soil carbon for each soil layer. In the same way
as soil moisture or temperature, this should be reported as a multi-level
output, cSoilLevels. As the structure for this may vary between models, it is
essential that the model is thoroughly documented. The sum of soil carbon
over all cSoilLevels should be identical to the total cSoil tier-1 variable.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><caption><p>Summary of tier-2 data request of carbon pools and fluxes by sub-grid land cover fraction.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Portion of gridbox</oasis:entry>  
         <oasis:entry colname="col2">Pools</oasis:entry>  
         <oasis:entry colname="col3">Fluxes</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">treeFrac</oasis:entry>  
         <oasis:entry colname="col2">cVegTree, cLitterTree, cSoilTree</oasis:entry>  
         <oasis:entry colname="col3">gppTree, nppTree, raTree, rhTree</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">shrubFrac</oasis:entry>  
         <oasis:entry colname="col2">cVegShrub, cLitterShrub, cSoilShrub</oasis:entry>  
         <oasis:entry colname="col3">gppShrub, nppShrub, raShrub, rhShrub</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">grassFrac</oasis:entry>  
         <oasis:entry colname="col2">cVegGrass, cLitterGrass, cSoilGrass</oasis:entry>  
         <oasis:entry colname="col3">gppGrass, nppGrass, raGrass, rhGrass</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">cropFrac</oasis:entry>  
         <oasis:entry colname="col2">cVegCrop, cLitterCrop, cSoilCrop</oasis:entry>  
         <oasis:entry colname="col3">gppCrop, nppCrop, raCrop, rhCrop</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">pastureFrac</oasis:entry>  
         <oasis:entry colname="col2">cVegPast, cLitterPast, cSoilPast</oasis:entry>  
         <oasis:entry colname="col3">gppPast, nppPast, raPast, rhPast</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p>Most soil carbon models represent multiple soil carbon pools (such as fast
or slow turnover, or decomposable and resistant organic material). In order
to be able to diagnose and evaluate the turnover rates of carbon within the
terrestrial system, we make a second tier 2 request to report individual soil
carbon pools (Fig. 5b, lower panel). It is also required to report the
turnover rate (tSoilPools: defined as 1/residence time) for each pool. The
pool-flux structure of each model should be fully documented in its model
description paper. This output will enable reduced complexity approaches
(e.g. Xia et al., 2013) to recreate and analyse the soil carbon dynamics
within each model. The sum of soil carbon over all cSoilPools should be
identical to the total cSoil tier-1 variable.</p>
</sec>
<sec id="Ch1.S4.SS1.SSSx4" specific-use="unnumbered">
  <title>Land carbon pools: tier-2 carbon on sub-grid tiles</title>
      <p>A final tier-2 breakdown is required to report the main stores and fluxes
separately for different land cover types. The LUMIP data request (Lawrence
et al., 2016) requests carbon pools and fluxes for four land cover types:
crop, pasture, primary and secondary land (combined as one tile), and urban.
For C4MIP we additionally request a breakdown of carbon pools and fluxes
within “primary and secondary” land onto tree, shrub, and grass separately.
Section 4.1.4 describes the C4MIP requested output of land cover fractions.
Carbon pools (cVeg, cLitter and cSoil) and fluxes (gpp, npp, ra, rh) are
therefore requested on the treeFrac, shrubFrac, grassFrac, cropFrac, and
pastureFrac fractions shown in Fig. 11. Table 3 lists all of these
requests.</p>
</sec>
<sec id="Ch1.S4.SS1.SSSx5" specific-use="unnumbered">
  <title>Land carbon fluxes</title>
      <p>Equally important to the land carbon pools are the fluxes going into and out
of them, which will allow us to gain insight into how the pools have changed
and why. For ease of understanding, we have adopted a convention for newly
defined variables that a carbon pool is prefixed by a “c” (as in cVeg or
cSoil) and a flux by an “f” (as in fLandToOcean). Some existing variables
(e.g. gpp and npp) do not conform to this but are considered to be well
known and do not need to be changed.</p>
      <p>Figure 6 shows the variables requested for terrestrial carbon fluxes.
Similar to land carbon pools, the objective of tier-1 fluxes is to capture
the primary system behaviour, and tier-2 fluxes provide breakdown within the
tier-1 fluxes allowing for a more detailed analysis. The directions of the
arrows indicate the sign convention of the flux, which is considered positive
in the direction in which the arrows are pointing. For example, gross primary productivity (gpp) is positive downwards indicating flux of carbon
<italic>from </italic>the atmosphere <italic>to</italic> the vegetation, whereas autotrophic respiration (ra) is
positive upwards indicating flux of carbon <italic>from</italic> the vegetation <italic>to</italic> the atmosphere.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><caption><p>Requested tier-1 and tier-2 variables representing land carbon
fluxes. The colours of the arrows correspond to the type of flux. The orange
arrows represent “natural” fluxes that represent pathways of carbon
exchange between the land and atmosphere. These natural fluxes would
generally be expected to be non-zero in all simulations. The brown arrows
represent fluxes associated with anthropogenic disturbance between land
pools or between the land and the atmosphere. These fluxes would be expected
to be non-zero in simulations that implement anthropogenic land-use change
based on land-use change scenarios. The yellow arrows represent internal
fluxes within the veg–litter–soil system. Finally, the blue arrow represents
carbon loss from land to the ocean, which may be a subset of leached carbon,
although not all models may simulate this flux.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f06.png"/>

          </fig>

      <p>Gross primary productivity is the flux of carbon from the atmosphere
to the vegetation that is associated with photosynthesis. Net primary
productivity (npp) represents the carbon uptake by vegetation after the
autotrophic respiration (ra) costs have been taken into account (npp <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> gpp
<inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula> ra). Both ra and npp are sub-divided into tier-2 outputs representing flux
from the leaf, stem, and root, components respectively, plus also a category
“other”, which should include all the components (if any) reported under
cOther tier-2 carbon pool. Also, similar to land surface pools, the sum of
the tier-2 fluxes must be identical to their parent tier-1 flux.
              <disp-formula id="Ch1.E3" content-type="numbered"><mml:math display="block"><mml:mrow><mml:mi mathvariant="normal">npp</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">nppLeaf</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">nppStem</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">nppRoot</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">nppOther</mml:mi></mml:mrow></mml:math></disp-formula>
            Heterotrophic respiratory flux (rh) and CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions associated with
natural wildfires (fFireNat) represent carbon loss from the land carbon
stores to the atmosphere. rh is requested to be sub-divided into its tier-2
components from the litter and soil pools. Similarly, fFireNat is
sub-divided into fire CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions from vegetation and litter carbon
pools. Note, that fFireNat should not include CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions from fires
associated with anthropogenic land-use change.</p>
      <p>Anthropogenic land-use change or land management can result in transfer of
carbon out of the vegetation, litter and soil carbon pools either directly
to the atmosphere (fAnthDisturb) or to the product pool. fAnthDisturb is
proposed to be split into fluxes due to land-cover change (fDeforestToAtmos)
or management (fHarvestToAtmos), if this distinction is made in the model.
Anthropogenic fires, associated with LUC, should be included in
fAnthDisturb. Fluxes into the product pool should similarly be reported as
either fDeforestToProduct or fHarvestToProduct. Decomposition of carbon in
the product pool represents a carbon flux back to the atmosphere
(fProductDecomp).</p>
      <p>Due to the complexity of the processes involved, especially in the treatment
of land use and management, and the growing complexity in the manner in
which LUC is represented in the models, it is possible that this simple
framework may not be completely compatible with all models. It is simply not
possible to define in advance of CMIP6 a framework that may cover every
possible flux in every model. Our request is, therefore, that all fluxes of
carbon are reported somewhere, in the best possible way that they may fit
within the framework shown in Fig. 6, and not missed. This will ensure
conservation of carbon within the reported variables.</p>
      <p>An example of differences in model structure and processes is the manner in
which litter from the vegetation pool is transferred to the soil carbon
pool. Some models simulate litter fall from vegetation into the litter pool
and then subsequent assimilation into the soil carbon pool. Some models may
also simulate this flux directly from vegetation to soil carbon. In either
case tier-2 breakdown of the litterfall flux due to senescence (normal
turnover) and mortality is requested; this breakdown is expected to help to
diagnose changes in turnover time of the litter and soil carbon pools.</p>
      <p>Figure 6 also forms the basis of carbon conservation properties that must be
obeyed by the reported outputs. These include the manner in which fluxes
should add up and that the rate of change of carbon in carbon pools must be
equal to the sum of fluxes going in and out of the pools, or equivalently
changes in pools must be equal to the sum of time integral of the fluxes
into and out of the pools.
              <disp-formula id="Ch1.E4" content-type="numbered"><mml:math display="block"><mml:mrow><mml:mi mathvariant="normal">gpp</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">npp</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">ra</mml:mi></mml:mrow></mml:math></disp-formula>

                  <disp-formula specific-use="align" content-type="numbered"><mml:math display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E5"><mml:mtd/><mml:mtd/><mml:mtd><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi mathvariant="normal">cVeg</mml:mi></mml:mrow><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi mathvariant="normal">npp</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">fVegLitter</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">fVegSoil</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">fAnthDisturb</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><?xmltex \hack{\hspace*{5mm}}?><mml:mo>-</mml:mo><mml:mi mathvariant="normal">fDeforestToProduct</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">fHarvestToProduct</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">fVegFire</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E6"><mml:mtd/><mml:mtd/><mml:mtd><mml:mrow><?xmltex \hack{\hbox\bgroup\fontsize{9}{9}\selectfont$\displaystyle}?><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi mathvariant="normal">cLitter</mml:mi></mml:mrow><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi mathvariant="normal">fVegLitter</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">fLitterSoil</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">fLitterFire</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">rhLitter</mml:mi><?xmltex \hack{$\egroup}?></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E7"><mml:mtd/><mml:mtd/><mml:mtd><mml:mrow><?xmltex \hack{\hbox\bgroup\fontsize{9.5}{9.5}\selectfont$\displaystyle}?><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi mathvariant="normal">cSoil</mml:mi></mml:mrow><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi mathvariant="normal">fLitterSoil</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">fVegSoil</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">rhSoilfLandToOcean</mml:mi><?xmltex \hack{$\egroup}?></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E8"><mml:mtd/><mml:mtd/><mml:mtd><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi mathvariant="normal">cProduct</mml:mi></mml:mrow><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi mathvariant="normal">fDeforestToProduct</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><?xmltex \hack{\hspace*{5mm}}?><mml:mo>+</mml:mo><mml:mi mathvariant="normal">fHarvestToProductfProductDecomp</mml:mi></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula></p>
      <p>We define a new variable, <italic>netAtmosLandCO2Flux</italic>, which is the total flux of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> from the
land to the atmosphere. It should encompass every flux from land to
atmosphere so that the total from each model can be compared without having
to know model details of which component fluxes to sum. Due to differences
in naming convention, we have chosen not to call this NBP (net biome
productivity). This is an essential tier-1 variable requested from all C4MIP
simulations.</p>
</sec>
<sec id="Ch1.S4.SS1.SSS2">
  <title>Land nitrogen cycle variables</title>
      <p>Figures 7 and 8 summarize the requested terrestrial nitrogen pools and flux
variables from models that include a representation of terrestrial nitrogen
cycle and its coupling to the terrestrial carbon cycle. The nitrogen pools
are designed to parallel their corresponding carbon stores as closely as
possible, giving primarily the storage of nitrogen in the vegetation (nVeg),
litter (nLitter), and soil organic matter (nSoil) pools. Additionally, we are
requesting mineral nitrogen in soil (nMineral), which is sub-divided into
tier-2 variables representing ammonium (nMineralNH4) and nitrate
(nMineralNO3) mineral nitrogen. We do not envisage much interest in the
nProduct variable (nitrogen stored in anthropogenic product pools), but it
is required as a tier-1 output in order to close the nitrogen budget and
ensure mass conservation of analyses. There will also be likely little
interest in separating nLitter into its tier-2 components nLitterCwd,
nLitterSurf and nLitterSubSurf but these variables are being requested for
consistency with their carbon counterparts.</p>
      <p>Requested fluxes associated with the flow of nitrogen over land are
summarized in Fig. 8 and differ more from their carbon counterparts than
do the carbon and nitrogen pools. As with the pools, all fluxes should be
reported somewhere in order to be able to close nitrogen cycle budget over
land and ensure mass conservation of analyses. As with carbon fluxes, the
sign convention of the flux is considered positive in the direction in which
the arrows are pointing</p>
      <p>Nitrogen enters the terrestrial ecosystems either through anthropogenic
inputs (which can be either atmospheric deposition, fNdep, or fertilizer
input fNfert) or through biological fixation (fBNF). Flows between
vegetation, litter, and soil organic N pools mirror the carbon fluxes, but
with additional terms that represent inorganic mineral nitrogen uptake by
vegetation (fNup) and the net mineralization flux, i.e. the difference
between gross mineralization and immobilization, from the dead litter and
soil organic matter pools to the mineral nitrogen pool (fNnetmin). fNnetmin
should be reported as positive <italic>into </italic>the nMineral pool. Negative values of
fNnetmin then imply net immobilization.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><caption><p>Requested tier-1 and tier-2 variables representing land nitrogen
pools.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f07.png"/>

          </fig>

      <p>The tier-1 variables that represent the loss of nitrogen from the primary
terrestrial pools of vegetation, litter and soil organic matter include
fluxes due to anthropogenic disturbance: either into the LUC product pool
(fNproduct) or loss direct to the atmosphere fNAnthDisturb and loss from the
mineral nitrogen pool (fNloss). In order to conserve nitrogen, all losses of
N must be reported into one of these variables. fNloss may be further
sub-divided (if represented in the model) into tier-2 outputs of gaseous
loss to the atmosphere (fNgas) and loss of dissolved organic and inorganic
nitrogen through leaching (fNleach), i.e. fNloss <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> fNgas <inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> fNleach. If
represented in the model, fNgas can be split into that due to fire and
non-fire. A further breakdown of tier-2 fluxes is also requested, if
available, but these do not necessarily have to add up to the tier-1 flux
value: fNOx and fN2O are components (but do not necessarily have to add up
to fNgas) and may be of interest for evaluation activities or coupling to
atmospheric chemistry models. fNLandToOcean may be a subset of fNleach and
is of interest for studying the impact of terrestrial nitrogen cycle on
coastal ocean ecosystems.</p>
</sec>
<sec id="Ch1.S4.SS1.SSS3">
  <title>Land physical variables</title>
      <p>While most variables representing the land surface physical state and water
fluxes will likely be requested by the land surface, snow, and soil moisture
model intercomparison project (LS3MIP, van den Hurk et al., 2016) and land-use model intercomparison project (LUMIP, Lawrence et al., 2016), C4MIP
requests some basic land surface physical variables as well. These include
soil moisture and temperature, vegetation leaf area index (LAI) and height,
and basic water fluxes.</p>
</sec>
<sec id="Ch1.S4.SS1.SSSx6" specific-use="unnumbered">
  <title>Physical state variables</title>
      <p>Figure 9 shows the state variables requested that characterize the physical
vegetation structure (through leaf area index and vegetation height) and the
physical state of the soil (through the soil moisture and temperature of a
model's soil layers).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8"><caption><p>Requested tier-1 and tier-2 variables representing land nitrogen
fluxes.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f08.png"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><caption><p>Requested state variables that characterize the physical
vegetation structure and the physical state of the soil.</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f09.png"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10"><caption><p>Requested land surface hydrological flux variables.</p></caption>
            <?xmltex \igopts{width=207.705118pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f10.png"/>

          </fig>

      <p>The only tier-1 state variable requested for vegetation structure is LAI, which represents the area of leaves per unit area of
ground. Vegetation height may also be considered an important evaluation
metric but this is requested as tier-2 variable. It is likely more useful to
distinguish vegetation height by vegetation type, i.e. by tree, shrub, grass,
and crop. If this distinction is not made or unavailable in a model then
only the grid-averaged vegetation height may be reported.</p>
      <p>Soil moisture and temperature are requested as tier-1 variables to be able
to analyse carbon and moisture fluxes together and to identify the role of
the physical state of the soil conditions on carbon stores and fluxes. The
total, liquid, and frozen soil moisture contents are aggregated and
disaggregated in various ways as shown in Fig. 9 and described below:
<list list-type="bullet"><list-item><p>soil temperature (tsl) is requested for each model level</p></list-item><list-item><p>soil moisture is requested as
<list list-type="bullet"><list-item><p>total soil moisture content (sum of frozen and liquid) in the top 10 cm,
mrsos;</p></list-item><list-item><p>total (mrsol), liquid (mrsll) and frozen (mrsfl) soil moisture content at
each model level;</p></list-item><list-item><p>column integrated total (mrso), liquid (mrlso) and frozen (mrfso) soil
moisture contents.</p></list-item></list></p></list-item></list>
Additionally, a total water diagnostic, mrtws, is requested as tier-2
variable. This includes all soil moisture as reported above (mrso) but
additionally includes water from other stores such as sub-grid lakes,
aquifers, or rivers if they are represented in the model.</p>
</sec>
<sec id="Ch1.S4.SS1.SSSx7" specific-use="unnumbered">
  <title>Physical water fluxes </title>
      <p>Figure 10 summarizes the small number of land surface hydrological fluxes
being requested. As with the carbon and nitrogen fluxes the sign convention
is shown by the direction of the arrows.
<list list-type="bullet"><list-item><p>prveg represents precipitation intercepted by the canopy, and evspsblveg
represents evaporation from the canopy leaves (including sublimation).</p></list-item><list-item><p>evspsblsoi represent evaporation from bare soil, and includes
sublimation.</p></list-item><list-item><p>tran represents transpiration flux of moisture through the vegetation and
out of the leaf stomata.</p></list-item></list>
Models may represent runoff in multiple ways. The runoff variables requested
here are distinct from river/stream flow variables, which other MIPs may
request. Runoff is represented in depth units (kg m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, while
river/stream flow represents volume of water per unit time generated by
integrating runoff from upstream grid cells (m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. mrros
represents the surface runoff from each grid cell, and mrro represents the
total runoff (including from the surface, the subsurface and any drainage
through the base of the soil model).</p>
</sec>
<sec id="Ch1.S4.SS1.SSS4">
  <title>Land cover state variables</title>
      <p>Figure 11 summarizes the land cover variables requested from all models. As
with other requested variables, these are categorized as simpler tier-1
variables, which represent the primary land cover types, while the tier-2
variables further break down the tier-1 variables into more detail. Tier-1
land cover variables are required from all models so that the land cover is
completely described. Where possible modelling groups are requested to
provide the additional details through tier-2 variables. It is important
that the combined totals of tier-2 variables agree with their tier-1
counterparts.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11"><caption><p>Requested land cover variables. Sea fraction is assume to be
fixed, so must be reported under “climatology”. Fractions must sum to 1 for
every grid cell (including the sea fraction). Fractions are per grid cell,
not per land area.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f11.png"/>

          </fig>

      <p>A grid cell is described in terms of vegetation fractional coverage
(vegFrac), fractional coverage of bare soil (baresoilFrac), and a residual
term (residualFrac) that may include fractional coverage of urban areas,
sub-grid-scale lakes, and stony outcrops. For grid cells at the continental
edges, a fraction of the grid cell may also be covered by open ocean/sea.
The vegFrac is further subdivided into fractional coverage by trees
(treeFrac), shrubs (shrubFrac), grasses (grassFrac), crops (cropFrac), and
pasture (pastureFrac). Crop and pasture fractions are the same as those requested
by LUMIP (Lawrence et al., 2016). Tree, shrub, and grass fractions represent
additional detail within the LUMIP tile called “primary and secondary
land”. All land cover must be reported, such that

                  <disp-formula specific-use="align" content-type="numbered"><mml:math display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E9"><mml:mtd/><mml:mtd/><mml:mtd><mml:mrow><mml:mi mathvariant="normal">VegFrac</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">baresoilFrac</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">residualFrac</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">SeaFrac</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E10"><mml:mtd/><mml:mtd/><mml:mtd><mml:mrow><mml:mi mathvariant="normal">treeFrac</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">shrubFrac</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">grassFrac</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">cropFrac</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><?xmltex \hack{\hspace*{5mm}}?><mml:mo>+</mml:mo><mml:mi mathvariant="normal">pastureFrac</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">VegFrac</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

              The tier-2 land cover variables follow the separation of trees based on
their leaf structure (broadleaf and needleleaf) and leaf phenology
(evergreen and deciduous) as treeFracNdlEvg, treeFracNdlDcd, treeFracBdlEvg,
treeFracBdlDcd. The fractional coverage of grasses, crops, and pasture is
separated into C<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and C<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> variants based on their photosynthetic
pathway. Tier-2 totals should sum to be identical to their tier-1
counterparts. For example

                  <disp-formula specific-use="align" content-type="numbered"><mml:math display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E11"><mml:mtd/><mml:mtd/><mml:mtd><mml:mrow><mml:mi mathvariant="normal">treeFracNdlEvg</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">treeFracNdlDcd</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><?xmltex \hack{\hspace*{5mm}}?><mml:mo>+</mml:mo><mml:mi mathvariant="normal">treeFracBdlEvg</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">treeFracBdlDcd</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">treeFrac</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E12"><mml:mtd/><mml:mtd/><mml:mtd><mml:mrow><mml:mi mathvariant="normal">grassFracC</mml:mi><mml:mn mathvariant="normal">3</mml:mn><mml:mo>+</mml:mo><mml:mi mathvariant="normal">grassFracC</mml:mi><mml:mn mathvariant="normal">4</mml:mn><mml:mo>=</mml:mo><mml:mi mathvariant="normal">grassFrac</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F12"><caption><p>Fire and wetland variables. Other than burntFractionAll, all
other variables are requested as tier 2 variables.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f12.png"/>

          </fig>

</sec>
<sec id="Ch1.S4.SS1.SSS5">
  <title>Auxiliary land cover fractions and fluxes</title>
      <p>Figure 12 shows auxiliary land cover diagnostics and fluxes that may be
reported. The additional land cover types are fractions of a grid cell
related to a biogeochemical process that models may specifically simulate.
These include burned area (burntFractionAll) and wetland fraction
(wetlandFrac). burntFractionAll is expected to include burned area from all
natural and anthropogenic processes (anthropogenic fires, and land-use
change and management-related fires). wetlandFrac is expected to include
natural wetlands (dynamically calculated in the model or specified)
including any area of rice paddies if it is explicitly represented. Both the
burnt and wetland fractions must be reported as the fraction of the grid
cell and not as fraction of the land or vegetation area. Where models also
estimate natural methane wetland emissions from the wetland fraction these
can also be reported (wetlandCH4prod) and must include emissions from rice
paddies (if represented) to make methane emissions consistent with the
reported wetland fraction. If models simulate methane uptake by soils then
this may be reported as wetlandCH4cons. The net land-to-atmosphere methane
flux is to be reported as wetlandCH4. Models that simulate methane emissions
from wetlands and/or rice paddies may explicitly simulate the depth to the
water table and this may also be reported as waterDpth. Positive values of
waterDpth indicate that the water table is below the ground surface and negative
values indicate that the water table is above the ground surface.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F13" specific-use="star"><caption><p>Ocean carbon cycle pools (blue boxes) and fluxes (yellow arrows)
with associated processes. Where appropriate, pools are grouped into
components like particulate organic carbon (POC).</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f13.png"/>

          </fig>

</sec>
</sec>
<sec id="Ch1.S4.SS2">
  <title>Ocean diagnostics</title>
      <p>Ocean biogeochemical stores and fluxes are described below. As with the
land, it is important that all carbon stocks are reported so that total
carbon can be tracked and conservation checked. Figures 13–16 show the
requested diagnostics. Tier-1 diagnostics are intended to be simple and
capture the whole ocean carbon cycle, while tier-2 diagnostics repeat tier-1
but in more detail. As such the total carbon is the sum of tier-1 and not
the combined sum of tier-1 plus tier-2. The main (tier-1) processes
considered are (1) gas exchange with the atmosphere that requires modelling
the coupled cycle of alkalinity, and (2) biological processes coupling the
carbon cycle with nitrogen, phosphorus, iron, silicon nutrients. These
biological processes are centred around phytoplankton-based primary
production of organic carbon, ecosystem modulation through zooplankton
grazing and higher trophic interactions, sinking of organic material out of
the 100 m reference level (nominal euphotic zone depth), and recycling of
nutrients. Additional mechanisms working at the process level may include:
biodiversity among phytoplankton, zooplankton and bacteria, dissolved
organic carbon cycling, oxygen cycling and its modulation of
remineralization and denitrification, N<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> fixation/denitrification,
flexibility in the stoichiometry among elements, sediment interactions,
silicification, calcification, lithogenics, mineral ballasting of sinking
material, aspects of iron cycle modulation through scavenging and the role
of ligands, phytoplankton mortality by aggregation, and viruses. The integral
of a particular tracer XXX over model vertical levels is IntXXX, and the
total time rate of change of tracer XXX is diagnosed as FddtXXX. Similarly,
the time rate of change due to the sum of all biological terms acting on
tracer XXX is diagnosed as FbddtXXX. XXXs is the surface value of XXX.</p>
      <p>The ocean ecosystem in ESMs typically comprises up to five phytoplankton
functional groups: diazotrophs, which can fix N<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> but may take up nitrate or
ammonia as well depending on the model formulation, diatoms, which take up
silicate to form opal tests, calcareous phytoplankton, which take up
dissolved carbonate and alkalinity to form calcite, or aragonite tests,
picophytoplankton, and miscellaneous phytoplankton in which any other
phytoplankton groups are combined. Zooplankton groups may be separated by
size into microzooplankton, mesozooplankton, and macrozooplankton. Combined
with bacteria and detritus, these pools form the particulate organic carbon
pool. Carbon stores in each of these sub-components are requested as tier-2
(Fig. 14) and should sum to be identical to their tier-1 counterparts.</p>
      <p>As shown in Fig. 15, phytoplankton growth consumes dissolved organic
carbon and nutrients in the presence of light to form particulate organic
carbon and oxygen through primary production (i.e. intPb), some of which is
exported (i.e. expC). For each phytoplankton group, the degree of limitation
by light (i.e. limIrrdiat), nitrogen (i.e. limNdiat), and iron (i.e.
limFediat) availability can be diagnosed. For each elemental cycle the
external sources (i.e. FSC) and removal (i.e. FRC) can be diagnosed. As
model implementation of multiple factor limitation is very model dependent,
limitation terms for light and nutrients should be diagnosed in a manner
consistent with model implementation. For each model participant, it will be
important to document how combinations of limitation terms should be
combined, multiplicatively, as the minimum, or otherwise</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F14"><caption><p>Ocean ecosystem carbon pools in terms of chlorophyll-based and
carbon-based phytoplankton functional groups, zooplankton size groups,
bacteria, detritus, and dissolved organic carbon. As with land carbon
diagnostics, the tier-2 requests are subcomponents of the tier-1 aggregate
quantities. For example, ZooC should report the total carbon pool in
zooplankton. The sum of the tier-2 components ZooMicro, ZooMeso and ZooMisc
should be identical to the tier-1 total. They are not additional pools to
it.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f14.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F15"><caption><p>Phytoplankton growth and export variables by phytoplankton group
and by associated elemental cycle including external sources and removal.
Export refers to the export flux due to sinking.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f15.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F16"><caption><p>Ocean chemistry including the suite of carbon system tracers and
those undergoing gas exchange.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f16.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F17"><caption><p>Carbon isotope diagnostics. Only report for models simulating
isotopes. We define
c13Land<inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula>c13Veg<inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>c13Litter<inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>c13Soil and likewise for c14Land. As for
cSoil, models with vertical discretization should also report above and
below 1 m separately as c13SoilAbove1m and c13SoilBelow1m and likewise for
c14.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/9/2853/2016/gmd-9-2853-2016-f17.png"/>

        </fig>

      <p>Chemistry associated with the carbon system and gas exchange is kept track
of through the variables provided in Fig. 16. Cycles include the full
carbon system associated with dissolved inorganic carbon and alkalinity as
well as additional components relevant to specific tracer analysis such as
the natural carbon system that is unaffected by anthropogenic CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, and
simplified abiotic dissolved inorganic carbon and abiotic alkalinity used
for simulation of radiocarbon (dissic14C, dissic14Cabio).</p>
</sec>
<sec id="Ch1.S4.SS3">
  <title>Carbon isotopes</title>
      <p>Carbon isotopes are not simulated in all models and have not been requested
or used before in C4MIP analyses. For CMIP6 we request that any model that
simulates isotopes of carbon (13 or 14) either on land or in the ocean
report them in the same way as the tier-1 carbon outputs.</p>
      <p>Figure 17 shows carbon isotope diagnostics, which are requested. These
represent stocks of carbon-13 and carbon-14 in both land and ocean
reservoirs and their exchange fluxes with the atmosphere. Net air–sea fluxes
of carbon-13 and carbon-14 and dissolved inorganic of carbon-13 and
carbon-14 concentrations in the ocean are requested. On land, fluxes of
carbon-13 and carbon-14 associated with gross primary productivity,
autotrophic respiration, and heterotrophic respiration, and stocks of
carbon-13 and carbon-14 in vegetation, litter, and soil are requested. The
same units used for carbon should be used for carbon-13 and carbon-14.
Stocks and fluxes of carbon-14 should be normalized with the standard
<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn>14</mml:mn></mml:msup></mml:math></inline-formula>C <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> C ratio, Rs, of <inline-formula><mml:math display="inline"><mml:mrow><mml:mn>1.176</mml:mn><mml:mo>×</mml:mo><mml:mn>10</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn>12</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Karlen et al., 1968). This
means that reported stocks and fluxes of carbon-14 should be divided by Rs.</p>
      <p>Decay of carbon-14 should use the currently accepted half-life of
5700 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 30 years. In ocean models, carbon-14 can be run as an abiotic
variable (Orr et al., 2000) or integrated into marine ecosystem carbon
cycling. If carbon-14 is run as an abiotic variable, abiotic dissolved
inorganic carbon concentrations and abiotic carbon air–sea fluxes must also
be reported. For carbon-13 in the ocean, we request only net air–sea fluxes
of carbon-13 and carbon-13 in DIC. We do not request variables related to
carbon-13 in phytoplankton or carbon-13 fluxes between DIC and
phytoplankton, even though ocean models including carbon-13 are likely to
include marine ecosystem cycling of carbon-13. More detail on implementing
carbon isotopes in ocean models for CMIP6 can be found in Orr et al. (2016).</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <title>Conclusions</title>
      <p>Processes in the natural carbon cycle currently remove approximately half of
anthropogenic emissions of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, helping to reduce the magnitude and
rate of climate change. How these processes may change in the future in
response to environmental changes and direct human forcing is uncertain.</p>
      <p>As an endorsed activity of CMIP6, C4MIP will contribute coordinated
simulations and analyses targeted at 3 key carbon cycle areas.
<list list-type="bullet"><list-item><p>Feedback quantification through idealized simulations. Here we hope to
better understand and quantify the sensitivity of land and ocean carbon
uptake to key environmental changes, and in particular the impact of climate
change on carbon uptake.</p></list-item><list-item><p>Model evaluation through analysis of historical simulations. Here we hope to
build trust in projections through process-based and top-down evaluation,
advancing our understanding of the strengths and weakness of ESMs and
documenting progress since CMIP5.</p></list-item><list-item><p>Future projections of climate and CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> under scenarios of CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
emissions. Here we hope to better project the future response to
anthropogenic activity through CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions-driven simulations that
allow for the full range of feedbacks to operate from CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions to the
evolution of atmospheric CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and the associated climate response.</p></list-item></list></p>
      <p>C4MIP will focus on the coupled Earth system, comprising
land–atmosphere–ocean physical realms and both the terrestrial and marine
carbon cycle components. Offline studies of land only or ocean only will
complement our analyses but are outside the specific remit of C4MIP.</p>
      <p>Over the last 2 years the C4MIP community has devised a compact and
efficient set of numerical experiments to be performed with ESMs to address
the above questions. In this paper we have documented the rationale and
set-up of these simulations and the required outputs. This therefore
constitutes the C4MIP contribution to CMIP6.</p>
</sec>
<sec id="Ch1.S6">
  <title>Data availability</title>
      <p>As with all CMIP6-endorsed MIPs, the model output from the C4MIP simulations
described in this paper will be distributed through the Earth System Grid
Federation (ESGF). The natural and anthropogenic forcing data sets required
for the simulations will be described in separate invited contributions to
this special issue and made available through the ESGF with version control
and digital object identifiers (DOIs) assigned. Links to all forcings
data sets will be made available via the CMIP Panel website.</p>
</sec>

      
      </body>
    <back><ack><title>Acknowledgements</title><p>CRESCENDO project members (CDJ, PF, LB, VB, TI, SZ)
acknowledge funding received from the Horizon 2020 European Union's
Framework Programme for Research and Innovation under grant agreement no.
641816. CDJ was supported by the Joint UK BEIS/Defra Met Office Hadley
Centre Climate Programme (GA01101). HDG was supported by a Marie Curie
Career Integration Grant from the European Commission. JP is supported by
the German Research Foundation's Emmy Noether Program (PO 1751/1-1).<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: C. Sierra<?xmltex \hack{\newline}?>
Reviewed by: C. Huntingford and two anonymous referees</p></ack><ref-list>
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  </ref-list><app-group content-type="float"><app><title/>

    </app></app-group></back>
    <!--<article-title-html>C4MIP – The Coupled Climate–Carbon Cycle Model Intercomparison Project:
experimental protocol for CMIP6</article-title-html>
<abstract-html><p class="p">Coordinated experimental design and implementation has become a
cornerstone of global climate modelling. Model Intercomparison Projects
(MIPs) enable systematic and robust analysis of results across many models,
by reducing the influence of ad hoc differences in model set-up or
experimental boundary conditions. As it enters its 6th phase, the
Coupled Model Intercomparison Project (CMIP6) has grown significantly in
scope with the design and documentation of individual simulations delegated
to individual climate science communities.</p><p class="p">The Coupled Climate–Carbon Cycle Model Intercomparison Project (C4MIP) takes
responsibility for design, documentation, and analysis of carbon cycle
feedbacks and interactions in climate simulations. These feedbacks are
potentially large and play a leading-order contribution in determining the
atmospheric composition in response to human emissions of CO<sub>2</sub> and in
the setting of emissions targets to stabilize climate or avoid dangerous
climate change. For over a decade, C4MIP has coordinated coupled
climate–carbon cycle simulations, and in this paper we describe the C4MIP
simulations that will be formally part of CMIP6. While the climate–carbon
cycle community has created this experimental design, the simulations also
fit within the wider CMIP activity, conform to some common standards
including documentation and diagnostic requests, and are designed to
complement the CMIP core experiments known as the Diagnostic, Evaluation and Characterization of Klima (DECK).</p><p class="p">C4MIP has three key strands of scientific motivation and the requested
simulations are designed to satisfy their needs: (1) pre-industrial and
historical simulations (formally part of the common set of CMIP6
experiments) to enable model evaluation, (2) idealized coupled and
partially coupled simulations with 1 % per year increases in CO<sub>2</sub> to
enable diagnosis of feedback strength and its components, (3) future
scenario simulations to project how the Earth system will respond to
anthropogenic activity over the 21st century and beyond.</p><p class="p">This paper documents in detail these simulations, explains their rationale
and planned analysis, and describes how to set up and run the simulations.
Particular attention is paid to boundary conditions, input data, and
requested output diagnostics. It is important that modelling groups
participating in C4MIP adhere as closely as possible to this experimental
design.</p></abstract-html>
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