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  <front>
    <journal-meta><journal-id journal-id-type="publisher">GMD</journal-id><journal-title-group>
    <journal-title>Geoscientific Model Development</journal-title>
    <abbrev-journal-title abbrev-type="publisher">GMD</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Geosci. Model Dev.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1991-9603</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/gmd-19-10321-2026</article-id><title-group><article-title>Towards high-fidelity simulations of coastal submesoscale baroclinic instabilities with MPAS-O (vE3SM3.0.0) – Part 1: Idealized experiments</article-title><alt-title>Idealized coastal submesoscale instabilities</alt-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Hinson</surname><given-names>Kyle E.</given-names></name>
          <email>kyle.hinson@pnnl.gov</email>
        <ext-link>https://orcid.org/0000-0002-2737-2379</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Schlichting</surname><given-names>Dylan R.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-9198-4583</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Hetland</surname><given-names>Robert D.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2 aff3">
          <name><surname>Engwirda</surname><given-names>Darren</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3379-9109</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Smith</surname><given-names>Katherine M.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-1603-7727</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Petersen</surname><given-names>Mark R.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7170-7511</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Uyeda</surname><given-names>Kaila</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Pacific Northwest National Laboratory, Richland, WA, USA</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Los Alamos National Laboratory, Los Alamos, NM, USA</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Commonwealth Scientific and Industrial Research Organisation, Hobart, TAS, Australia</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Department of Earth System Science, University of California Irvine, Irvine, CA, USA</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Kyle E. Hinson (kyle.hinson@pnnl.gov)</corresp></author-notes><pub-date><day>30</day><month>October</month><year>2026</year></pub-date>
      
      <volume>19</volume>
      <issue>21</issue>
      <fpage>10321</fpage><lpage>10344</lpage>
      <history>
        <date date-type="received"><day>20</day><month>March</month><year>2026</year></date>
           <date date-type="rev-request"><day>13</day><month>May</month><year>2026</year></date>
           <date date-type="rev-recd"><day>21</day><month>September</month><year>2026</year></date>
           <date date-type="accepted"><day>13</day><month>October</month><year>2026</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2026 Kyle E. Hinson et al.</copyright-statement>
        <copyright-year>2026</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026.html">This article is available from https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026.html</self-uri><self-uri xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026.pdf">The full text article is available as a PDF file from https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d2e158">Rapid advances in computational power over the past decade have enabled global, kilometer-scale simulations that realistically represent open-ocean submesoscale dynamics. However, the ability of global ocean models to represent coastal submesoscale dynamics – where flows are more heterogeneous and strongly shaped by coastlines, bathymetry, and buoyancy inputs – remains largely unexplored. This study is the first of two companion papers comparing coastal submesoscale processes representation in two models with very different numerical approaches: MPAS-O, an unstructured grid global ocean model, and ROMS, a structured grid regional model. This study is the first idealized evaluation of MPAS-O’s representation of coastal submesoscale dynamics using observed conditions in the Mississippi-Atchafalaya (M-A) River plume as a template for initial conditions, with the previously validated ROMS model serving as a benchmark. An important motivation for this study is to examine the suitability of models designed for global ocean simulations in reproducing energetic coastal flows. We compare statistical metrics based on flow invariants – total strain, relative vorticity, and divergence – as well as velocity gradients in frontal coordinates, across horizontal resolutions ranging from 10 km to 100 m within an idealized model domain. We find that the representation of submesoscale baroclinic instabilities is highly similar across all resolutions such that the impact of model choice is smaller than the choice of spatial grid resolution. We also compare numerical and physical mixing between models using online diagnostics based on discrete variance decay. We find that ROMS generally has more numerical mixing and less physical mixing than MPAS-O across all resolutions. Trends in numerical mixing likely arise from MPAS-O's flux-corrected transport tracer advection scheme, which exhibits a stronger variance-producing response relative to the MPDATA scheme used in the ROMS simulations. Trends in physical mixing likely arise from differences in each model’s configuration of the vertical mixing scheme (the K-Profile Parameterization). A companion paper extends this idealized model-model comparison to realistic simulations of the M-A River plume.</p>
  </abstract>
    
<funding-group>
<award-group id="gs1">
<funding-source>U.S. Department of Energy</funding-source>
<award-id>DE-FOA-0002585</award-id>
</award-group>
</funding-group>
</article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d2e170">There is a growing need for ocean models capable of accurately simulating coastal ocean processes that contribute to interacting and compounding risks affecting societal well-being, including storm impacts and marine-based food insecurity <xref ref-type="bibr" rid="bib1.bibx26" id="paren.1"/>. Coastal ocean dynamics are driven by the interaction of ephemeral submesoscales (<inline-formula><mml:math id="M1" display="inline"><mml:mi mathvariant="script">O</mml:mi></mml:math></inline-formula>(0.1–10 km)) and the larger, energetic mesoscales (<inline-formula><mml:math id="M2" display="inline"><mml:mi mathvariant="script">O</mml:mi></mml:math></inline-formula>(10–100 km)) <xref ref-type="bibr" rid="bib1.bibx36 bib1.bibx16 bib1.bibx63" id="paren.2"/>, necessitating a model that represents both scales simultaneously. Unstructured grid models are uniquely suited to tackle this problem because their multi-resolution capabilities enable high resolution in specific regions and coarser resolution elsewhere, substantially reducing the computational cost compared to structured-grid models <xref ref-type="bibr" rid="bib1.bibx35 bib1.bibx62" id="paren.3"/>. One example is the Model for Prediction Across Scales-Ocean (MPAS-O) <xref ref-type="bibr" rid="bib1.bibx44" id="paren.4"/>, the ocean component of the Energy Exascale Earth System Model (E3SM) <xref ref-type="bibr" rid="bib1.bibx18 bib1.bibx19" id="paren.5"/>. MPAS-O was developed by the U.S. Department of Energy to increase our understanding and prediction of Earth system processes critical to the energy sector and national security.</p>
      <p id="d2e203">Assessing whether unstructured global models such as MPAS-O can meet this challenge requires evaluating its representation of submesoscale dynamics, which has not yet been done. Submesoscale processes play a central role in both regional and global ocean dynamics. Reviews have emphasized their importance in driving vertical fluxes of heat, salt, and nutrients <xref ref-type="bibr" rid="bib1.bibx2 bib1.bibx60 bib1.bibx63" id="paren.6"/>, restratifying the mixed layer <xref ref-type="bibr" rid="bib1.bibx14 bib1.bibx57" id="paren.7"/>, and generating turbulence in the ocean surface boundary layer <xref ref-type="bibr" rid="bib1.bibx11" id="paren.8"/>. Characterized by stratified, nonlinear flows with <inline-formula><mml:math id="M3" display="inline"><mml:mrow><mml:mi mathvariant="script">O</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> Rossby numbers, submesoscales are inherently difficult to simulate accurately, even with sufficient horizontal resolution. Nonetheless, a growing body of literature suggests that global ocean models can statistically represent submesoscale processes in the open ocean <xref ref-type="bibr" rid="bib1.bibx12 bib1.bibx65" id="paren.9"/>.</p>
      <p id="d2e232">Whether this capability extends to the coastal ocean remains an open question. Coastal submesoscale flows differ fundamentally from their open-ocean, mixed-layer counterparts. They are more heterogeneous, shaped by complex coastlines and bathymetry, buoyancy inputs from rivers and estuaries, and interactions between coastal and offshore water masses. These factors produce a wider range of dynamical regimes that are more difficult to parameterize than the relatively homogeneous mixed-layer instabilities typical of the open ocean. Submesoscales can also be influenced by the timestepping, numerical advection schemes, and turbulence closure parameterizations <xref ref-type="bibr" rid="bib1.bibx59 bib1.bibx47 bib1.bibx48" id="paren.10"/>; both prescribed (physical) and spurious numerical mixing due to the discretization of advection can then feed back on submesoscale structure and evolution. As a result, it remains unclear to what extent unstructured global models such as MPAS-O, ICON-O <xref ref-type="bibr" rid="bib1.bibx30 bib1.bibx31" id="paren.11"/>, and FESOM <xref ref-type="bibr" rid="bib1.bibx10" id="paren.12"/>, can accurately simulate coastal submesoscale dynamics in realistic configurations.</p>
      <p id="d2e244">The E3SM project is pursuing both regional refinement and grid nesting to assess and improve the representation of coastal dynamics. This includes development of the Ocean Model for E3SM Global Applications (Omega), a GPU-enabled version of MPAS-O, but with non-Boussinesq dynamics and updated equation of state <xref ref-type="bibr" rid="bib1.bibx41" id="paren.13"/>. Omega will allow for higher global resolution (<inline-formula><mml:math id="M4" display="inline"><mml:mi mathvariant="script">O</mml:mi></mml:math></inline-formula>(1–5 km)) and/or extreme regional refinement over longer simulation times at dramatically reduced computational costs. In parallel, efforts are also underway to couple MPAS-O to the Regional Ocean Modeling System <xref ref-type="bibr" rid="bib1.bibx51" id="paren.14"><named-content content-type="pre">ROMS;</named-content></xref>.</p>
      <p id="d2e263">In this paper and its companion <xref ref-type="bibr" rid="bib1.bibx49" id="paren.15"><named-content content-type="post">hereinafter Part 2</named-content></xref>, we assess MPAS-O’s representation of coastal submesoscale baroclinic instabilities using idealized and realistic simulations. Together, the two studies provide guidance for ongoing development of Omega and for coupling strategies between ROMS and MPAS-O, clarifying the tradeoffs involved in pursuing seamless coastal–open ocean integration within a single global framework versus coupling specialized regional and global models. In both studies, MPAS-O is evaluated against the Regional Ocean Modeling System (ROMS; <xref ref-type="bibr" rid="bib1.bibx51" id="altparen.16"/>), a structured-grid regional model widely used to investigate submesoscale dynamics and shown to agree favorably with observations in multiple regions <xref ref-type="bibr" rid="bib1.bibx7 bib1.bibx8 bib1.bibx20" id="paren.17"><named-content content-type="pre">e.g.,</named-content></xref>. Here, we isolate the influence of horizontal resolution, grid structure, numerical formulation, and subgrid-scale parameterizations within an idealized configuration spanning resolutions from 100 m to 10 km. The configuration is based on the Mississippi-Atchafalaya (M-A) River plume system in the northern Gulf of Mexico (nGoM), a region characterized by strong buoyancy forcing and a summertime, anisotropic, rapidly evolving eddy field with significant near-inertial motions <xref ref-type="bibr" rid="bib1.bibx20 bib1.bibx42 bib1.bibx47" id="paren.18"/>. Encouraged by the results shown here, Part 2 presents realistic, submesoscale-permitting global simulations with MPAS-O at unprecedented horizontal resolution in the nGoM.</p>
      <p id="d2e282">Here, we evaluate the simulations using a suite of dynamical diagnostics based on the traditional invariant (i.e., independent of coordinate system choice) flow metrics of total strain, relative vorticity, and divergence that are commonly used to evaluate a flow field. We use these to better characterize and understand how circulation processes deform the flow and generate fronts, thereby characterizing the intensity and structure of submesoscale motions <xref ref-type="bibr" rid="bib1.bibx53 bib1.bibx21" id="paren.19"/>. Complementary diagnostics based on along- and cross-frontal velocity gradients distinguish physical and numerical contributions to frontogenesis and secondary circulation <xref ref-type="bibr" rid="bib1.bibx21" id="paren.20"/>. Finally, we compare numerical and physical tracer mixing rates between models using an online discrete variance decay diagnostic <xref ref-type="bibr" rid="bib1.bibx5" id="paren.21"/>, as differences in mixing rates directly influence the growth and evolution of submesoscale instabilities.</p>
      <p id="d2e294">An additional outcome of this study is the exploration of a new test case first introduced by <xref ref-type="bibr" rid="bib1.bibx21" id="text.22"/> that is easy to set up, but generates complex flows that are quite sensitive to numerical configuration. The configuration, with either walls or periodic boundary conditions, creates a limited domain without open boundaries, and the very simple initial condition rapidly generates instabilities that form strong fronts. These fronts push the limits of resolution through strongly convergent secondary circulation, and are therefore a stringent test of numerical representation of frontal processes that are sensitive to model configuration details such as resolution, numerical advection scheme, and turbulence closure choices. This is the first use of this test case to compare two very different numerical model approaches. We hope that this simple test case could become a standard used to compare different models or model configurations.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Model setup</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Model configuration and experiments</title>
      <p id="d2e315">The idealized model domain (Fig. <xref ref-type="fig" rid="F1"/>) is a 100 km by 300 km re-entrant channel with a constant depth <inline-formula><mml:math id="M5" display="inline"><mml:mrow><mml:mi>h</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">50</mml:mn></mml:mrow></mml:math></inline-formula> m, free-slip walls along the north and south boundaries, and periodic conditions along the east and west boundaries. The model is run on an <inline-formula><mml:math id="M6" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>-plane (<inline-formula><mml:math id="M7" display="inline"><mml:mrow><mml:mi>f</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<sup>−1</sup>), corresponding to an inertial period of roughly 17.4 h. This bi-directional, baroclinic instability–inducing channel (Bichan) configuration, despite its simplicity and flat bottom, develops a complex ocean state with multiscale interacting submesoscale fronts and eddies. The Bichan setup is a variant of the idealized domain presented in <xref ref-type="bibr" rid="bib1.bibx20" id="text.23"/> and provides a dynamically rich environment for studying the full lifecycle of frontal eddies, from their formation and frontogenesis to the onset of frontal instabilities, arrest, and eventual decay <xref ref-type="bibr" rid="bib1.bibx61" id="paren.24"/>.</p>

      <fig id="F1" specific-use="star"><label>Figure 1</label><caption><p id="d2e378">Initial conditions for the idealized channel domain of both models. The north-south boundaries use wall conditions, and the east-west boundaries are periodic. The 1 km ROMS mesh is used to produce the figure. <bold>(a)</bold> Surface salinity. Cross-sections of <bold>(b)</bold> potential temperature and <bold>(c)</bold> along-channel velocity with isopycnals overlaid every 2.5 kg m<sup>−3</sup>.</p></caption>
          <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f01.png"/>

        </fig>

      <p id="d2e408">Both MPAS-O and ROMS use vertical grids with 50 equally spaced levels, giving a vertical resolution of 1 m. MPAS-O employs a <inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:msup><mml:mi>z</mml:mi><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> coordinate within an arbitrary Eulerian–Lagrangian framework <xref ref-type="bibr" rid="bib1.bibx39" id="paren.25"/>, while ROMS uses a terrain-following coordinate with surface and bottom stretching parameters <inline-formula><mml:math id="M11" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi mathvariant="normal">b</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>. Because the Bichan configuration uses a flat bottom, the vertical coordinates in the two models behave similarly. As a result, differences between MPAS-O and ROMS in these experiments primarily reflect their numerical schemes and subgrid-scale parameterizations rather than vertical coordinate choice. In the realistic nGoM comparison presented in Part 2, vertical coordinate differences may play a larger role. However, because bathymetric gradients on the Texas-Louisiana shelf (where the eddies are prominent) are gentle, coordinate effects should not significantly influence overall model performance. Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/> presents a proof-of-concept demonstration of the Bichan configuration with variable bathymetry; these simulations are not part of the primary flat-bottom comparison discussed here.</p>
      <p id="d2e454">Initial tracer distributions (Fig. <xref ref-type="fig" rid="F1"/>a–b) of temperature, <inline-formula><mml:math id="M12" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, and salinity, <inline-formula><mml:math id="M13" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula>, are defined by constants, <inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mi>g</mml:mi><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mi mathvariant="italic">ρ</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:msubsup><mml:mi mathvariant="italic">ρ</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M15" display="inline"><mml:mrow><mml:msup><mml:mi>M</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mi>g</mml:mi><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mi mathvariant="italic">ρ</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:msubsup><mml:mi mathvariant="italic">ρ</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, that define the vertical stratification and lateral density gradients,

                <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M16" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E1"><mml:mtd><mml:mtext>1</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi>T</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi>g</mml:mi><mml:mi mathvariant="italic">α</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mi>z</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E2"><mml:mtd><mml:mtext>2</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi>S</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>S</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi>M</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi>g</mml:mi><mml:mi mathvariant="italic">β</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mi>y</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

          where <inline-formula><mml:math id="M17" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">25</mml:mn></mml:mrow></mml:math></inline-formula> °C, <inline-formula><mml:math id="M18" display="inline"><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">15</mml:mn></mml:mrow></mml:math></inline-formula> g kg<sup>−1</sup>, <inline-formula><mml:math id="M20" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 1.7<inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> °C<sup>−1</sup> and <inline-formula><mml:math id="M23" display="inline"><mml:mrow><mml:mi mathvariant="italic">β</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 7.6<inline-formula><mml:math id="M24" display="inline"><mml:mrow><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> g<sup>−1</sup> kg are the linear thermal and haline expansion coefficients in the linearized equation of state,

            <disp-formula id="Ch1.E3" content-type="numbered"><label>3</label><mml:math id="M26" display="block"><mml:mrow><mml:mi mathvariant="italic">ρ</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mi>T</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M27" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1027</mml:mn></mml:mrow></mml:math></inline-formula> kg m<sup>−3</sup> is the reference density. As a result, the initial salinity varies only in cross-channel direction and temperature varies only in the vertical direction. The first deformation radius, estimated as <inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi>N</mml:mi><mml:mi>h</mml:mi><mml:mo>/</mml:mo><mml:mi>f</mml:mi></mml:mrow></mml:math></inline-formula>, is approximately 5 km at the start of the simulation, similar to conditions observed on the Texas-Louisiana shelf <xref ref-type="bibr" rid="bib1.bibx20" id="paren.26"/>.</p>
      <p id="d2e867">The along-channel <inline-formula><mml:math id="M30" display="inline"><mml:mi mathvariant="bold-italic">u</mml:mi></mml:math></inline-formula> velocity is laterally homogeneous and is gradually relaxed from 0.5 m s<sup>−1</sup> to zero towards the bottom (Fig. <xref ref-type="fig" rid="F1"/>c). The initial cross-shore velocity is set to zero. A small perturbation to the initial <inline-formula><mml:math id="M32" display="inline"><mml:mi mathvariant="bold-italic">u</mml:mi></mml:math></inline-formula> velocity with a period of 100 km in both the along- and cross-channel directions and an amplitude of 0.01 m s<sup>−1</sup> is applied to supply perturbations on which instabilities can form and grow.</p>
      <p id="d2e910">Simulations are forced with near-inertial wind stress in the along-channel direction:

            <disp-formula id="Ch1.E4" content-type="numbered"><label>4</label><mml:math id="M34" display="block"><mml:mrow><mml:msup><mml:mi mathvariant="italic">τ</mml:mi><mml:mi>x</mml:mi></mml:msup><mml:mo>=</mml:mo><mml:msubsup><mml:mi mathvariant="italic">τ</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mi>x</mml:mi></mml:msubsup><mml:mi mathvariant="normal">sin</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0.9</mml:mn><mml:mi>f</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">τ</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mi>x</mml:mi></mml:msubsup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula> Pa is the near-inertial wind stress amplitude, which is slightly stronger than values observed in the nGoM <xref ref-type="bibr" rid="bib1.bibx48" id="paren.27"/>. The purpose of the wind stress is to provide some resonant, near-inertial forcing to make the model more similar to summer conditions in the nGoM and sharpen the fronts <xref ref-type="bibr" rid="bib1.bibx48" id="paren.28"/>.</p>
      <p id="d2e971">Our goal is to compare the representation of surface submesoscale dynamics between ROMS and MPAS-O across a range of resolutions ranging from mesoscale eddy-resolving to submesoscale front-resolving. To do so, we conducted a series of 50 d experiments across the following resolutions: 10, 5, 2, 1 km, 500, 200, and 100 m. Details of the model setup across resolutions are provided in the next subsections and summarized in Table <xref ref-type="table" rid="T1"/>.</p>

<table-wrap id="T1" specific-use="star"><label>Table 1</label><caption><p id="d2e979">Model configuration parameters used for all MPAS-O and ROMS simulations.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Resolution</oasis:entry>

         <oasis:entry colname="col2">Model</oasis:entry>

         <oasis:entry colname="col3">Baroclinic <inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:math></inline-formula> [s]</oasis:entry>

         <oasis:entry colname="col4">Barotropic <inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:math></inline-formula> [s]</oasis:entry>

         <oasis:entry colname="col5"><inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">ν</mml:mi><mml:mn mathvariant="normal">4</mml:mn><mml:mi>u</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula> [m<sup>4</sup> s<sup>−1</sup>]</oasis:entry>

         <oasis:entry colname="col6"><inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">ν</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mi>u</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula> [m<sup>2</sup> s<sup>−1</sup>]</oasis:entry>

       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1" morerows="1">10 km</oasis:entry>

         <oasis:entry colname="col2">MPAS-O</oasis:entry>

         <oasis:entry colname="col3">600</oasis:entry>

         <oasis:entry colname="col4">60</oasis:entry>

         <oasis:entry colname="col5"><inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:mn mathvariant="normal">6.2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">9</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col6">5.6</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col2">ROMS</oasis:entry>

         <oasis:entry colname="col3">400</oasis:entry>

         <oasis:entry colname="col4">40</oasis:entry>

         <oasis:entry colname="col5">–</oasis:entry>

         <oasis:entry colname="col6">5.6</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1" morerows="1">5 km</oasis:entry>

         <oasis:entry colname="col2">MPAS-O</oasis:entry>

         <oasis:entry colname="col3">300</oasis:entry>

         <oasis:entry colname="col4">30</oasis:entry>

         <oasis:entry colname="col5"><inline-formula><mml:math id="M45" display="inline"><mml:mrow><mml:mn mathvariant="normal">7.7</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">8</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col6">2.8</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col2">ROMS</oasis:entry>

         <oasis:entry colname="col3">200</oasis:entry>

         <oasis:entry colname="col4">20</oasis:entry>

         <oasis:entry colname="col5">–</oasis:entry>

         <oasis:entry colname="col6">2.8</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1" morerows="1">2 km</oasis:entry>

         <oasis:entry colname="col2">MPAS-O</oasis:entry>

         <oasis:entry colname="col3">120</oasis:entry>

         <oasis:entry colname="col4">12</oasis:entry>

         <oasis:entry colname="col5"><inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:mn mathvariant="normal">4.9</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">7</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col6">1.1</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col2">ROMS</oasis:entry>

         <oasis:entry colname="col3">60</oasis:entry>

         <oasis:entry colname="col4">6</oasis:entry>

         <oasis:entry colname="col5">–</oasis:entry>

         <oasis:entry colname="col6">1.1</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1" morerows="1">1 km</oasis:entry>

         <oasis:entry colname="col2">MPAS-O</oasis:entry>

         <oasis:entry colname="col3">60</oasis:entry>

         <oasis:entry colname="col4">6</oasis:entry>

         <oasis:entry colname="col5"><inline-formula><mml:math id="M47" display="inline"><mml:mrow><mml:mn mathvariant="normal">6.7</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col6">0.56</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col2">ROMS</oasis:entry>

         <oasis:entry colname="col3">30</oasis:entry>

         <oasis:entry colname="col4">3</oasis:entry>

         <oasis:entry colname="col5">–</oasis:entry>

         <oasis:entry colname="col6">0.56</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1" morerows="1">500 m</oasis:entry>

         <oasis:entry colname="col2">MPAS-O</oasis:entry>

         <oasis:entry colname="col3">20</oasis:entry>

         <oasis:entry colname="col4">2</oasis:entry>

         <oasis:entry colname="col5"><inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:mn mathvariant="normal">7.7</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col6">0.28</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col2">ROMS</oasis:entry>

         <oasis:entry colname="col3">10</oasis:entry>

         <oasis:entry colname="col4">1</oasis:entry>

         <oasis:entry colname="col5">–</oasis:entry>

         <oasis:entry colname="col6">0.28</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1" morerows="1">200 m</oasis:entry>

         <oasis:entry colname="col2">MPAS-O</oasis:entry>

         <oasis:entry colname="col3">10</oasis:entry>

         <oasis:entry colname="col4">1</oasis:entry>

         <oasis:entry colname="col5"><inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:mn mathvariant="normal">4.9</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">4</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col6">0.11</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col2">ROMS</oasis:entry>

         <oasis:entry colname="col3">5</oasis:entry>

         <oasis:entry colname="col4">0.5</oasis:entry>

         <oasis:entry colname="col5">–</oasis:entry>

         <oasis:entry colname="col6">0.11</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1" morerows="1">100 m</oasis:entry>

         <oasis:entry colname="col2">MPAS-O</oasis:entry>

         <oasis:entry colname="col3">4</oasis:entry>

         <oasis:entry colname="col4">0.4</oasis:entry>

         <oasis:entry colname="col5"><inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mn mathvariant="normal">6.2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col6">0.055</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">ROMS</oasis:entry>

         <oasis:entry colname="col3">2</oasis:entry>

         <oasis:entry colname="col4">0.2</oasis:entry>

         <oasis:entry colname="col5">–</oasis:entry>

         <oasis:entry colname="col6">0.055</oasis:entry>

       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>MPAS-O</title>
<sec id="Ch1.S2.SS2.SSS1">
  <label>2.2.1</label><title>Overview</title>
      <p id="d2e1502">MPAS-O is a global ocean model that solves a mimetic finite-volume discretization of the primitive equations on an unstructured Arakawa C-grid <xref ref-type="bibr" rid="bib1.bibx1 bib1.bibx44" id="paren.29"/>. The horizontal mesh is generated from a planar centroidal Voronoi tessellation, producing a uniform hexagonal grid. It solves prognostic equations for momentum, layer thickness, and tracers using a vector-invariant form of the momentum equation expressed in vorticity–kinetic energy form  <xref ref-type="bibr" rid="bib1.bibx1" id="paren.30"/>. MPAS-O vE3SM3.0.0 is configured from a branch that introduces minor changes relative to the formally described model of <xref ref-type="bibr" rid="bib1.bibx19" id="text.31"/>. These include the use of a free-slip wall boundary condition (instead of a no-slip condition) and the addition of the online discrete variance decay diagnostics (DVD) by <xref ref-type="bibr" rid="bib1.bibx5" id="text.32"/> (Fig. <xref ref-type="fig" rid="F1"/>).</p>
</sec>
<sec id="Ch1.S2.SS2.SSS2">
  <label>2.2.2</label><title>Momentum advection</title>
      <p id="d2e1527">Momentum advection in MPAS-Ocean is computed using an energy-conserving, vector-invariant discretization based on the TRiSK framework <xref ref-type="bibr" rid="bib1.bibx45 bib1.bibx64" id="paren.33"/>. The scheme is nominally second-order centered in space and ensures conservation of kinetic energy and potential enstrophy. However, because the advection operator is non-dissipative, explicit eddy viscosity is required to control grid-scale numerical oscillations. This is further discussed in Sect. <xref ref-type="sec" rid="Ch1.S2.SS2.SSS5"/>. A quadratic bottom drag stress parameterization with a drag coefficient of 0.0015 is used.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS3">
  <label>2.2.3</label><title>Time integration</title>
      <p id="d2e1543">A split-explicit scheme is used <xref ref-type="bibr" rid="bib1.bibx44" id="paren.34"/>, in which the barotropic system is integrated using a second-order forward–backward method <xref ref-type="bibr" rid="bib1.bibx22" id="paren.35"/>, while the baroclinic tendencies are advanced with a second-order Adams–Bashforth scheme. Coupling between barotropic and baroclinic modes is achieved via a rectangular barotropic filter.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS4">
  <label>2.2.4</label><title>Tracer advection</title>
      <p id="d2e1560">A Flux-Corrected Transport (FCT) scheme following <xref ref-type="bibr" rid="bib1.bibx39 bib1.bibx55" id="text.36"/> is used. In this scheme, a low-order monotone flux (typically upwind) is first computed, and a high-order flux – based on third- or fourth-order reconstructions – is then corrected using the low-order flux to ensure monotonicity. This approach is applied separately to both horizontal and vertical transport <xref ref-type="bibr" rid="bib1.bibx40" id="paren.37"/>.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS5">
  <label>2.2.5</label><title>Mixing parameterizations</title>
      <p id="d2e1578">Given the centered-difference approach used in MPAS-O to discretize the vector-invariant momentum advection terms, explicit horizontal momentum mixing is required to prevent spurious kinetic energy and tracer variance from accumulating at the grid scale, which can lead to an unphysical ocean state <xref ref-type="bibr" rid="bib1.bibx25 bib1.bibx37" id="paren.38"/>. MPAS-O supports Laplacian and biharmonic viscosity closures, providing second- and fourth-order dissipation, respectively <xref ref-type="bibr" rid="bib1.bibx6" id="paren.39"/>. An option for the grid-scale and flow-aware Leith viscosity <xref ref-type="bibr" rid="bib1.bibx33" id="paren.40"/> is also available; however, it has not been tuned and is beyond the scope of the current study. For models that require specified background horizontal mixing for numerical robustness, like MPAS-O, this leads to a conundrum where specified background mixing may be at once too much – smoothing out important small scale features, like fronts – while at the same time never enough – as reasonable values of specified background mixing for the solution as a whole still allow numerical dispersion and associated grid scale noise at the smallest scales.</p>
      <p id="d2e1590">To guide the choice of viscosity coefficients and quantify the strength of explicit horizontal mixing, we use the grid Reynolds number, defined as the ratio of horizontal inertial forces to horizontal viscous forces at the grid scale. Harmonic (<inline-formula><mml:math id="M51" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ν</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">∇</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mi mathvariant="bold-italic">u</mml:mi></mml:mrow></mml:math></inline-formula>) and biharmonic (<inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ν</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">∇</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msup><mml:mi mathvariant="bold-italic">u</mml:mi></mml:mrow></mml:math></inline-formula>) dissipation act on larger and smaller scales, respectively. For a given simulation, the coefficients <inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ν</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ν</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are held constant and scaled according to the grid cell resolution (<inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:math></inline-formula>) relative to a reference cell width (<inline-formula><mml:math id="M56" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">ref</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>). Here, <inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">ref</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> was set to 30 km, comparable to values used in previous high-resolution MPAS-O studies <xref ref-type="bibr" rid="bib1.bibx44" id="paren.41"/> and roughly twice the values commonly employed in 30 km (<inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula>) NEMO simulations <xref ref-type="bibr" rid="bib1.bibx37" id="paren.42"/>:

                  <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M59" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E5"><mml:mtd><mml:mtext>5</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msubsup><mml:mi mathvariant="italic">ν</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mi>u</mml:mi></mml:msubsup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3.33</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">1</mml:mn></mml:msup><mml:mo mathsize="2.5em">(</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">ref</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:msup><mml:mo mathsize="2.5em">)</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:msup><mml:mo>×</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E6"><mml:mtd><mml:mtext>6</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msubsup><mml:mi mathvariant="italic">ν</mml:mi><mml:mn mathvariant="normal">4</mml:mn><mml:mi>u</mml:mi></mml:msubsup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3.33</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">11</mml:mn></mml:msup><mml:mo mathsize="2.5em">(</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">ref</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:msup><mml:mo mathsize="2.5em">)</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:mo>×</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            The grid Reynolds number <inline-formula><mml:math id="M60" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:msub><mml:mi>e</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is calculated using the biharmonic viscosity coefficient, since it dominates grid-scale dissipation:

              <disp-formula id="Ch1.E7" content-type="numbered"><label>7</label><mml:math id="M61" display="block"><mml:mrow><mml:mi>R</mml:mi><mml:msub><mml:mi>e</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="bold-italic">U</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mn mathvariant="normal">8</mml:mn><mml:msubsup><mml:mi mathvariant="italic">ν</mml:mi><mml:mn mathvariant="normal">4</mml:mn><mml:mi>u</mml:mi></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

            where <inline-formula><mml:math id="M62" display="inline"><mml:mi mathvariant="bold-italic">U</mml:mi></mml:math></inline-formula> is a horizontal velocity scale. Because <inline-formula><mml:math id="M63" display="inline"><mml:mi mathvariant="bold-italic">U</mml:mi></mml:math></inline-formula> has multiple meanings for eddying flows, we computed probability density functions of <inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:msub><mml:mi>e</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> using the surface grid-scale velocities (not shown) and found a mean value of 20 across all simulations, comparable to assuming <inline-formula><mml:math id="M65" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">U</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> m s<sup>−1</sup>. While <xref ref-type="bibr" rid="bib1.bibx25" id="text.43"/> recommends <inline-formula><mml:math id="M67" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:msub><mml:mi>e</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi></mml:msub><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula>, these values were based on tuning experiments of MPAS-O at coarser resolutions; the consequences are discussed in Sect. <xref ref-type="sec" rid="Ch1.S3"/>. No explicit horizontal mixing is applied to tracers.</p>
      <p id="d2e1960">Vertical mixing in MPAS-O is parameterized using the K-Profile Parameterization (KPP) via the Community Vertical Mixing library (CVMix; <xref ref-type="bibr" rid="bib1.bibx32 bib1.bibx66" id="altparen.44"/>). The ocean surface boundary layer (OSBL) is diagnosed using a critical bulk Richardson number of 0.25, with boundary layer depth and vertical mixing profiles computed using the “SimpleShapes” option and quadratic interpolation to the OSBL base. Convective mixing is triggered under unstable stratification and is scaled based on the local buoyancy frequency. Shear-driven mixing in the interior is also parameterized using KPP, with coefficients set by the critical Richardson number and velocity shear. A background viscosity of <inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> m<sup>2</sup> s<sup>−1</sup> and diffusivity of <inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> m<sup>2</sup> s<sup>−1</sup> are applied outside the OSBL. Additional options, such as horizontal smoothing of Richardson number profiles and the Bryan–Lewis interior mixing scheme, are enabled to provide smooth transitions between boundary layer and interior mixing.</p>
</sec>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>ROMS</title>
<sec id="Ch1.S2.SS3.SSS1">
  <label>2.3.1</label><title>Overview</title>
      <p id="d2e2053">ROMS is a limited-domain structured grid ocean model with stretched terrain-following vertical coordinates that operates on an Arakawa C-Grid <xref ref-type="bibr" rid="bib1.bibx1 bib1.bibx51" id="paren.45"/>, and allows nesting to better resolve regions of increased spatial resolution. ROMS v4.2 is configured using a branch derived from the ROMS-Rutgers implementation with a modification to the DVD diagnostics. This modification is described in Sect. <xref ref-type="sec" rid="Ch1.S2.SS4.SSS3"/>.</p>
</sec>
<sec id="Ch1.S2.SS3.SSS2">
  <label>2.3.2</label><title>Momentum advection</title>
      <p id="d2e2070">The simulations here use a third-order upwind scheme in the horizontal and fourth-order centered scheme in the vertical <xref ref-type="bibr" rid="bib1.bibx50" id="paren.46"/>. In addition, a quadratic bottom stress parametrization with a drag coefficient of 0.0015 is applied, matching MPAS-O.</p>
</sec>
<sec id="Ch1.S2.SS3.SSS3">
  <label>2.3.3</label><title>Time integration</title>
      <p id="d2e2084">The baroclinic mode is stepped with a third-order Adams Bashforth scheme. The barotropic mode is stepped with a third-order Leapfrog Adams Moulton scheme with forward-backward feedback. Tracers are stepped with Leapfrog scheme with a trapezoidal corrector <xref ref-type="bibr" rid="bib1.bibx52" id="paren.47"/>.</p>
</sec>
<sec id="Ch1.S2.SS3.SSS4">
  <label>2.3.4</label><title>Tracer advection</title>
      <p id="d2e2098">Multidimensional Positive Definite Advection Transport Algorithm (MPDATA) is used for horizontal and vertical tracer advection <xref ref-type="bibr" rid="bib1.bibx58" id="paren.48"/>. Although ROMS supports several high-order tracer advection schemes, MPDATA was selected due to its success in previous studies of submesoscale baroclinic instabilities in realistic <xref ref-type="bibr" rid="bib1.bibx29 bib1.bibx42 bib1.bibx47" id="paren.49"/> and idealized <xref ref-type="bibr" rid="bib1.bibx20 bib1.bibx48" id="paren.50"/> domains.</p>
</sec>
<sec id="Ch1.S2.SS3.SSS5">
  <label>2.3.5</label><title>Mixing parameterizations</title>
      <p id="d2e2119">ROMS’ third-order upwind momentum advection scheme <xref ref-type="bibr" rid="bib1.bibx50 bib1.bibx51" id="paren.51"/> introduces implicit fourth-order biharmonic dissipation. This dissipation is grid-scale and flow-aware such that it depends on the local velocity, grid spacing, and flow direction relative to the grid. For this reason, high-resolution limited domain and estuarine ROMS configurations usually employ a small amount of explicit horizontal mixing to reduce grid-scale noise not damped by the implicit dissipation <xref ref-type="bibr" rid="bib1.bibx47 bib1.bibx48" id="paren.52"/>. ROMS supports options for explicit harmonic and biharmonic horizontal mixing of momentum and tracers, but they cannot be used simultaneously. The simulations here use harmonic mixing of momentum aligned with the terrain-following surfaces based on its success in previous studies of submesoscale dynamics in realistic and idealized domains <xref ref-type="bibr" rid="bib1.bibx4 bib1.bibx29 bib1.bibx48" id="paren.53"/>. The values of <inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">ν</mml:mi><mml:mi mathvariant="normal">h</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> are shown in Table <xref ref-type="table" rid="T1"/> and mimic those selected for MPAS-O simulations. No explicit horizontal mixing is applied to the tracers.</p>
      <p id="d2e2146">For vertical mixing, ROMS' native KPP scheme is used, which provides the closest available comparison to the standardized and portable KPP formulation included in the MPAS-Ocean configuration that uses the CVMix library <xref ref-type="bibr" rid="bib1.bibx32 bib1.bibx66" id="paren.54"/>. Although both approaches follow the general structure of <xref ref-type="bibr" rid="bib1.bibx32" id="text.55"/>, several notable algorithmic and numerical differences exist between them. As highlighted in previous studies <xref ref-type="bibr" rid="bib1.bibx34 bib1.bibx46" id="paren.56"/>, the ROMS implementation is more tightly hard-coded and less configurable than CVMix, and these differences can lead to divergent solutions even in idealized one-dimensional tests.</p>
      <p id="d2e2158">A full description of all distinctions between the KPP implementations is beyond the scope of this paper; here we briefly note that ROMS differs in its calculation of the ocean surface boundary-layer depth, its boundary-layer shape functions for turbulent diffusivities and nonlocal fluxes, and its treatment of convective adjustment in unstable columns. Shear-driven mixing in the interior is based on bulk Richardson-number-dependent diffusivities and viscosities, with options for horizontal and vertical averaging to improve numerical stability. A Shapiro filter is applied to the vertical mixing coefficients to suppress spurious oscillations and smooth the profiles, which are then interpolated to the vertical velocity cell faces using cubic splines.</p>
</sec>
</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Analysis methods</title>
      <p id="d2e2170">We apply multiple techniques to compare physical dynamics for all model simulations which include surface and volume integrated energetics, measures of flow invariants, and diagnostics of physical and numerical mixing. Details for each of these are provided in the subsections below.</p>
<sec id="Ch1.S2.SS4.SSS1">
  <label>2.4.1</label><title>Energetics</title>
      <p id="d2e2180">We compute surface kinetic energy (KE) levels as well as volume-integrated eddy kinetic energy (EKE) over the 50 d simulation period between 50 and 250 km in the <inline-formula><mml:math id="M75" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula>-direction to avoid wall effects. EKE is normalized by mean kinetic energy at the initial timestep, computed as

              <disp-formula id="Ch1.E8" content-type="numbered"><label>8</label><mml:math id="M76" display="block"><mml:mrow><mml:mi mathvariant="normal">EKE</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∭</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mfenced open="[" close="]"><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">d</mml:mi><mml:mi>V</mml:mi></mml:mrow><mml:mrow><mml:mo>∭</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mfenced close="]" open="["><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mrow><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow><mml:mrow><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mrow><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow><mml:mrow><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfenced><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">d</mml:mi><mml:mi>V</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

            where <inline-formula><mml:math id="M77" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> and <inline-formula><mml:math id="M78" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> represented the volume weighted zonal means of each velocity component. Time series of both KE and EKE are smoothed using a low-pass PL33 filter <xref ref-type="bibr" rid="bib1.bibx13" id="paren.57"/>, though the raw values are also retained and utilized to compute the maximum 10 d average period over which flow invariants are analyzed.</p>
</sec>
<sec id="Ch1.S2.SS4.SSS2">
  <label>2.4.2</label><title>Flow invariants</title>
      <p id="d2e2337">Analyses of the experimental results are computed over the surface layer for total kinetic energy, and histograms of relative vorticity, <inline-formula><mml:math id="M79" display="inline"><mml:mi mathvariant="italic">ζ</mml:mi></mml:math></inline-formula>, divergence, <inline-formula><mml:math id="M80" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula>, and total strain, <inline-formula><mml:math id="M81" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>, defined as

                  <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M82" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E9"><mml:mtd><mml:mtext>9</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="italic">ζ</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>v</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>u</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E10"><mml:mtd><mml:mtext>10</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="italic">δ</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>u</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>v</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E11"><mml:mtd><mml:mtext>11</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="italic">σ</mml:mi><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">n</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:msqrt><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            where <inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">n</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> correspond to the components of normal strain <inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">n</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>u</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>v</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula> and shear strain <inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>v</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>u</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula>, respectively. These flow invariants are commonly used and allow us to interpret our simulations in the context of previous studies (e.g., <xref ref-type="bibr" rid="bib1.bibx54" id="altparen.58"/>).</p>
      <p id="d2e2578">Comprehensive analyses of frontogenesis can also help identify the capability of models to capture nonlinear processes at multiple spatial resolutions, providing a rigorous test of effective resolution between models where vertical mixing, or the irreversible loss of vertical stratification, is most strongly affected. Therefore, analyses of frontogenesis were conducted following the methodology of <xref ref-type="bibr" rid="bib1.bibx21" id="text.59"/> which computes histograms within the coordinates of the front. The cross- and along-frontal velocity components within this coordinate system are denoted by <inline-formula><mml:math id="M87" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:math></inline-formula> and <inline-formula><mml:math id="M88" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:math></inline-formula>, respectively, which correspond to the frontal coordinate directions (<inline-formula><mml:math id="M89" display="inline"><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:math></inline-formula> and <inline-formula><mml:math id="M90" display="inline"><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:math></inline-formula>) that are rotated by the angle <inline-formula><mml:math id="M91" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula> from regular Cartesian coordinates (<inline-formula><mml:math id="M92" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M93" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula>, see Fig. 1 in <xref ref-type="bibr" rid="bib1.bibx21" id="altparen.60"/>),

                  <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M94" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E12"><mml:mtd><mml:mtext>12</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mover accent="true"><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi mathvariant="normal">cos</mml:mi><mml:mi mathvariant="italic">α</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mspace width="0.33em" linebreak="nobreak"/><mml:mi mathvariant="normal">sin</mml:mi><mml:mi mathvariant="italic">α</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E13"><mml:mtd><mml:mtext>13</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mover accent="true"><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi mathvariant="normal">sin</mml:mi><mml:mi mathvariant="italic">α</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mspace linebreak="nobreak" width="0.33em"/><mml:mi mathvariant="normal">cos</mml:mi><mml:mi mathvariant="italic">α</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            The cross-frontal gradient of <inline-formula><mml:math id="M95" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:math></inline-formula> can then be defined in frontal coordinates as well,

              <disp-formula id="Ch1.E14" content-type="numbered"><label>14</label><mml:math id="M96" display="block"><mml:mrow><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>u</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow></mml:mfrac></mml:mstyle><mml:mspace width="0.33em" linebreak="nobreak"/><mml:mi mathvariant="normal">cos</mml:mi><mml:mi mathvariant="italic">α</mml:mi><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>v</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow></mml:mfrac></mml:mstyle><mml:mspace width="0.33em" linebreak="nobreak"/><mml:mi mathvariant="normal">sin</mml:mi><mml:mi mathvariant="italic">α</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>u</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>u</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mspace linebreak="nobreak" width="0.33em"/><mml:mi mathvariant="normal">cos</mml:mi><mml:mi mathvariant="italic">α</mml:mi><mml:mo>+</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>v</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>v</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mspace linebreak="nobreak" width="0.33em"/><mml:mi mathvariant="normal">sin</mml:mi><mml:mi mathvariant="italic">α</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mi>x</mml:mi></mml:msub><mml:mspace linebreak="nobreak" width="0.33em"/><mml:msup><mml:mi mathvariant="normal">cos</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mi mathvariant="italic">α</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mi>y</mml:mi></mml:msub><mml:mspace linebreak="nobreak" width="0.33em"/><mml:mi mathvariant="normal">sin</mml:mi><mml:mi mathvariant="italic">α</mml:mi><mml:mspace linebreak="nobreak" width="0.33em"/><mml:mi mathvariant="normal">cos</mml:mi><mml:mi mathvariant="italic">α</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mi>x</mml:mi></mml:msub><mml:mspace width="0.33em" linebreak="nobreak"/><mml:mi mathvariant="normal">sin</mml:mi><mml:mi mathvariant="italic">α</mml:mi><mml:mspace width="0.33em" linebreak="nobreak"/><mml:mi mathvariant="normal">cos</mml:mi><mml:mi mathvariant="italic">α</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>+</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mi>y</mml:mi></mml:msub><mml:mspace linebreak="nobreak" width="0.33em"/><mml:msup><mml:mi mathvariant="normal">sin</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mi mathvariant="italic">α</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>

            This is equivalent to the negative of the frontogenesis function, with <inline-formula><mml:math id="M97" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula> defining the rate of frontal sharpening. Following similar steps, the along-front gradient rotated to local frontal coordinates can be expressed as

              <disp-formula id="Ch1.E15" content-type="numbered"><label>15</label><mml:math id="M98" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>v</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mi>x</mml:mi></mml:msub><mml:mspace width="0.33em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">sin</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mi mathvariant="italic">α</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mi>y</mml:mi></mml:msub><mml:mspace width="0.33em" linebreak="nobreak"/><mml:mi mathvariant="normal">sin</mml:mi><mml:mi mathvariant="italic">α</mml:mi><mml:mspace width="0.33em" linebreak="nobreak"/><mml:mi mathvariant="normal">cos</mml:mi><mml:mi mathvariant="italic">α</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mi>x</mml:mi></mml:msub><mml:mi mathvariant="normal">sin</mml:mi><mml:mi mathvariant="italic">α</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi mathvariant="normal">cos</mml:mi><mml:mi mathvariant="italic">α</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>+</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mi>y</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="normal">cos</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mi mathvariant="italic">α</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula></p>
      <p id="d2e3127">Along-channel means and standard deviations of velocities and tracers are also computed over a 10 d window centered around average peak surface kinetic energy levels. Like KE and EKE, probability density functions are computed over the surface level of the model domain between 50 and 250 km in the <inline-formula><mml:math id="M99" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula>-direction, and are analyzed over the same 10 d period during which the average generation of frontal processes across multiple resolutions is maximized.</p>
</sec>
<sec id="Ch1.S2.SS4.SSS3">
  <label>2.4.3</label><title>Mixing diagnostics</title>
      <p id="d2e3145">We focus on numerical and physical salinity mixing because the density variations are dominated by salinity variations (Fig. <xref ref-type="fig" rid="F1"/>). Online mixing diagnostics have been previously implemented and validated in ROMS <xref ref-type="bibr" rid="bib1.bibx27" id="paren.61"/>. They have been added into MPAS-O for this study and future work. Physical mixing for these simulations is given by

              <disp-formula id="Ch1.E16" content-type="numbered"><label>16</label><mml:math id="M100" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="script">M</mml:mi><mml:mi mathvariant="normal">phy</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msub><mml:mi mathvariant="italic">κ</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></disp-formula>

            where <inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">κ</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the vertical tracer diffusivity. The validation of <inline-formula><mml:math id="M102" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="script">M</mml:mi><mml:mi mathvariant="normal">phy</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is not shown for MPAS-O because it simply requires ensuring online and offline calculations (snapshots) agree to machine precision. We note that previous ROMS versions calculated <inline-formula><mml:math id="M103" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="script">M</mml:mi><mml:mi mathvariant="normal">phy</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> using the resolved diffusivity <inline-formula><mml:math id="M104" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">κ</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">κ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math id="M105" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">κ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is the background vertical diffusivity. Instead, we use the total diffusivity <inline-formula><mml:math id="M106" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">κ</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> so that all prescribed processes that destroy tracer variance are represented.</p>
      <p id="d2e3265">Numerical salinity mixing is quantified using the DVD algorithm by <xref ref-type="bibr" rid="bib1.bibx5" id="text.62"/>:

              <disp-formula id="Ch1.E17" content-type="numbered"><label>17</label><mml:math id="M107" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="script">M</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>A</mml:mi><mml:mspace width="-0.125em" linebreak="nobreak"/><mml:mfenced open="{" close="}"><mml:mrow><mml:mo>(</mml:mo><mml:mi>s</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mi>A</mml:mi><mml:mspace linebreak="nobreak" width="-0.125em"/><mml:mfenced open="{" close="}"><mml:mi>s</mml:mi></mml:mfenced></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

            where <inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:mi>A</mml:mi><mml:mo mathvariant="italic">{</mml:mo><mml:mo>.</mml:mo><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula> is the advection operator and <inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:math></inline-formula> is the baroclinic timestep. The advection operator is equal to the updated concentration of the tracer <inline-formula><mml:math id="M110" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula> when passed solely through the advection scheme. In both models, numerical mixing diagnostics are currently supported only for active tracers. In practice, this requires introducing two additional tracers per active tracer, initialized with <inline-formula><mml:math id="M111" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:msup><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>, for which all tracer tendencies other than advection (e.g., implicit vertical mixing) are disabled. For this study, we implemented and verified it for MPAS-O by comparing online diagnostics of <inline-formula><mml:math id="M113" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="script">M</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> with a tracer variance budget residual approach for the advection of a top-hat tracer distribution (see Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>).</p>
      <p id="d2e3384">Local estimates of <inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="script">M</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> can be contaminated by implicit diffusion and by variance changes associated with fluxes across cell interfaces, which makes them inherently noisy; however, when integrated over the full domain, these contributions cancel exactly, yielding a global variance decay calculation that closes to machine precision <xref ref-type="bibr" rid="bib1.bibx3 bib1.bibx28" id="paren.63"/>. More computationally efficient DVD algorithms exist (referenced above) that are thought to be more accurate at the grid scale, but they have not been implemented in ROMS or MPAS-O yet because of their complexity. Despite these differences, no method produces fully consistent local results; however, all approaches are believed to provide similar bulk (volume-integrated) <inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="script">M</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. Each approach recommends applying spatial and/or temporal averaging to local <inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="script">M</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> fields to reduce grid-scale noise. However, because the channel configuration contains rapidly evolving, multiscale eddies, it is unclear how to define a grid- and flow-aware average that selectively removes grid-scale noise without smearing out the “true” numerical mixing. To partially alleviate the grid-scale noise, we use averages saved every two hours (the same frequency as snapshots) for mixing related calculations.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Results</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Energetics and flow invariants</title>
      <p id="d2e3440">The representation of submesoscale dynamics varies strongly with horizontal resolution, highlighted by surface relative vorticities during a period of high kinetic energy for both models (Day 12, Fig. <xref ref-type="fig" rid="F2"/>) where submesoscale fronts (<inline-formula><mml:math id="M117" display="inline"><mml:mi mathvariant="script">O</mml:mi></mml:math></inline-formula> 1–10 km) and eddies (<inline-formula><mml:math id="M118" display="inline"><mml:mi mathvariant="script">O</mml:mi></mml:math></inline-formula> 50 km, roughly 10 times the deformation radius) emerge across all resolutions. Inter-model comparisons at each resolution shows qualitatively similar results in the representation of eddy and frontal dynamics for both MPAS-O and ROMS. At 5–10 km resolutions (Fig. <xref ref-type="fig" rid="F2"/>a–b, h–i), which we consider eddy-permitting, the representation of submesoscale frontal processes is limited by both ocean models. At 1–2 km resolutions (Fig. <xref ref-type="fig" rid="F2"/>c–d, j–k), which we consider to be eddy-resolving, relative vorticity magnitude increases and frontal instabilities emerge in both models – dark red areas that appear “braided”. At sub-kilometer resolutions (Fig. <xref ref-type="fig" rid="F2"/>e–g, l–n), resolution is sufficient to resolve cross-frontal processes and frontal instabilities become more complex in both models. The imprint of gravity waves propagating away from frontal convergence zones in regions with anticyclonic vorticity becomes apparent at 100–200 m resolutions for both models (Fig. <xref ref-type="fig" rid="F2"/>f–g, m–n).</p>

      <fig id="F2" specific-use="star"><label>Figure 2</label><caption><p id="d2e3470">Snapshots of surface normalized relative vorticity (<inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:mi mathvariant="italic">ζ</mml:mi><mml:msup><mml:mi>f</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) plots for MPAS-O <bold>(a–g)</bold> and ROMS <bold>(h–n)</bold> on Day 12.</p></caption>
          <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f02.jpg"/>

        </fig>

      <p id="d2e3501">The persistence in the location of fronts is evident in the ROMS simulations as spatial resolution is refined from 1 km to 100 m (Fig. <xref ref-type="fig" rid="F2"/>k–n). Generally, better defined frontal structures result in greater variability at finer spatial resolutions within the front itself. Similarities in the locations of fronts in MPAS-O at the same time are much less apparent compared to the ROMS simulations, although there is greater spatial coherence in MPAS-O among some of the fine-scale (100–200 m) simulations at earlier time periods (see animations of both simulations in the  data archive). This relative lack of spatial coherence in MPAS-O is likely due to unavoidable highly nonlinear grid-scale processes (further elaborated on in the discussion) that help define early differences in initial conditions that then rapidly evolve. Like the fine-scale ROMS simulations (Fig. <xref ref-type="fig" rid="F2"/>m–n), comparable MPAS-O results show greater variability within frontal regions (Fig. <xref ref-type="fig" rid="F2"/>f–g).</p>
      <p id="d2e3511">Grid-scale noise emerges in MPAS-O at sub-kilometer resolutions (Fig. <xref ref-type="fig" rid="F2"/>e–g), where it organizes into wave-like structures similar to Gibbs phenomenon. This noise is much weaker in the 500 m simulation and increases with increasing resolution. These results suggest that the biharmonic viscosity, which dissipates energy at the smallest resolved scales and is controlled by the grid Reynolds number, requires retuning at sub-kilometer resolutions for the new second-order Adams-Bashforth time-stepping scheme. A grid Reynolds number of 20 was tuned for the original split-explicit time stepping <xref ref-type="bibr" rid="bib1.bibx44" id="paren.64"/> and is commonly used in various MPAS-O configurations. A systematic retuning is beyond the scope of this study due to the substantial computational and storage costs of the 100–200 m simulations; for example, the 100 m simulation requires nearly six days of wall-clock time on 4096 cores and produces 11 TB of output. The impacts of this grid-scale noise are discussed throughout the paper.</p>
      <p id="d2e3519">The emergence of energetic submesoscale frontal processes occurs more rapidly in ROMS than MPAS-O, evidenced by time series of surface domain-averaged kinetic energy (KE) and depth-integrated eddy kinetic energy (EKE) across all resolutions (Fig. <xref ref-type="fig" rid="F3"/>). Low levels of KE and EKE are simulated during the first 4–5 d for both MPAS-O and ROMS simulations. At approximately Day 5, however, the mean surface KE in the ROMS model domain rapidly increases, peaking around Day 10 at 0.65 m<sup>2</sup> s<sup>−2</sup> for all sub-kilometer resolution scenarios (Fig. <xref ref-type="fig" rid="F3"/>b). This average peak in MPAS-O mean surface KE occurs 4 d later than ROMS, at similar levels (Fig. <xref ref-type="fig" rid="F3"/>a). MPAS-O simulations also decrease surface KE more rapidly but reach approximately the same endpoint as ROMS simulations over the remainder of the 50 d period, although both 10 km model scenarios decay most rapidly and reach a lower stable endpoint (Fig. <xref ref-type="fig" rid="F3"/>a–b). This pattern, however, does not hold for EKE time series, which peak at higher levels for coarser resolutions in MPAS-O than ROMS, with generally less stability for most resolutions (Fig. <xref ref-type="fig" rid="F3"/>c–d). Generally, there is greater variability in the absolute value of surface KE across model resolutions for ROMS than MPAS-O over the first half of the simulation period. For EKE, the trend towards a lower stable configuration is more variable for a greater number of spatial resolutions in ROMS, but MPAS-O has a noticeable uptick in the highest resolution (100 m) simulation, likely a spurious mode that emerges as grid-scale tracer variance becomes more important. A key detail not reflected in Fig. <xref ref-type="fig" rid="F3"/> is that there is there is much less structure within and surrounding fronts in MPAS-O compared to ROMS beyond the halfway point in the simulations (<inline-formula><mml:math id="M122" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> Day 25, see data archive animations). We return to this point again in Sect. <xref ref-type="sec" rid="Ch1.S3.SS2"/>.</p>

      <fig id="F3" specific-use="star"><label>Figure 3</label><caption><p id="d2e3567">Time series of mean surface KE for MPAS-O <bold>(a)</bold> and ROMS <bold>(b)</bold> simulations over a range of spatial resolutions. Time series of normalized eddy kinetic energy (EKE) are shown for MPAS-O <bold>(c)</bold> and ROMS <bold>(d)</bold>. Thicker lines show the KE time series smoothed with a PL33 filter while the lighter lines show the unfiltered data. Gray shaded regions in all panels correspond to the average maximum 10 d period of KE (Day 8–18) that is analyzed in subsequent histogram plots.</p></caption>
          <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f03.png"/>

        </fig>

      <p id="d2e3588">The kinetic energy spectra (Fig. <xref ref-type="fig" rid="F4"/>) computed over the entirety of the simulation also reinforces that ROMS has slightly greater levels of regular high frequency variability compared to MPAS-O. Both ocean models show a clearly defined subinertial peak in their spectra, closely matching the imposed periodic wind forcings. At lower frequencies, the two models are highly similar at 1 km resolution; generally differences in the KE spectra distributions between the two ocean models are smaller than the differences in distribution for an ocean model across multiple spatial resolutions. While the amplitude of high-frequency (near daily) variability in surface KE is greater for ROMS than MPAS-O in the first month of the simulation, this difference is diminished by Day 40 (<xref ref-type="fig" rid="F3"/>a–b), as both models converge to surface KE levels that are only slightly greater than initial conditions as the strong salinity gradients are progressively eroded. The average 10 d periods of maximum surface KE for both models (Day 8–18) are banded in gray (Fig. <xref ref-type="fig" rid="F3"/>a–b) and these subsets of the simulations are used for calculations in the remaining analyses.</p>

      <fig id="F4"><label>Figure 4</label><caption><p id="d2e3599">Power density spectra of the time series for MPAS-O (black lines) and ROMS (red lines) where the thicker lines for both models show the 1 km spatial resolution spectra and thinner lines represent all other spatial resolutions. Dashed lines correspond to the frequencies of the periodic wind forcing and Coriolis term.</p></caption>
          <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f04.png"/>

        </fig>

      <p id="d2e3609">Surface relative vorticity and divergence dynamics demonstrate similar shifts in their distributions due to increasing resolution for both MPAS-O and ROMS (Fig. <xref ref-type="fig" rid="F5"/>) over the 10 d period when surface mean KE is maximized (Fig. <xref ref-type="fig" rid="F3"/>). At coarse spatial resolutions, the PDF of relative vorticity (Fig. <xref ref-type="fig" rid="F5"/>a–b) is slightly positively skewed with a shorter positive tail, indicating lower levels of frontogenesis. In both models, this skew also becomes more positive at higher spatial resolutions, and is slightly more peaked in negative vorticity for MPAS-O than ROMS at equivalent resolutions with the exception of the 100 m scenario. This elevated peak in MPAS-O negative <inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:mi mathvariant="italic">ζ</mml:mi><mml:mo>/</mml:mo><mml:mi>f</mml:mi></mml:mrow></mml:math></inline-formula> is indicative of a sharper division between eddies and frontal regions in ROMS simulations at higher spatial resolutions compared to smoother gradients found in MPAS-O. Both models also show a distinctive asymmetric shift leftwards at resolutions finer than 5 km, with the highest peak in negative vorticity occurring for both models' 500 m simulations.</p>

      <fig id="F5" specific-use="star"><label>Figure 5</label><caption><p id="d2e3632">PDFs of surface relative vorticity <bold>(a, b)</bold> and surface divergence within fronts where <inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:mi mathvariant="italic">ζ</mml:mi><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> <bold>(c, d)</bold> for MPAS-O <bold>(a, c)</bold> and ROMS <bold>(b, d)</bold> simulations over a range of spatial resolutions. Negative relative vorticity values correspond to a greater amount of anticyclonic flows characterized by eddy activity, while positive vorticity values are associated with frontal processes. Fraction of strongly convergent <bold>(e)</bold> and strongly divergent <bold>(f)</bold> flow along fronts at all spatial resolutions for MPAS-O (black) and ROMS (red).</p></caption>
          <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f05.png"/>

        </fig>

      <p id="d2e3672">The distributions of normalized divergence within fronts (where <inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:mi mathvariant="italic">ζ</mml:mi><mml:msup><mml:mi>f</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, Fig. <xref ref-type="fig" rid="F5"/>c–f) again emphasize that inter-model differences between MPAS-O and ROMS are smaller than intra-model spatial resolution differences. In both models, coarser spatial resolutions produced a lesser amount of fronts (locations where <inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:mi mathvariant="italic">ζ</mml:mi><mml:msup><mml:mi>f</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>), resulting in lower levels of divergence (positive <inline-formula><mml:math id="M127" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> axis) and convergence (negative <inline-formula><mml:math id="M128" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> axis) than more highly spatially resolved simulations. There is also a marked change in the distributions of divergence as spatial resolution decreases below 1 km, where the distribution is severely flattened and extends outwards beyond <inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>&lt;</mml:mo><mml:mi mathvariant="italic">δ</mml:mi><mml:msup><mml:mi>f</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>. Both models show that the vast majority (<inline-formula><mml:math id="M130" display="inline"><mml:mo lspace="0mm">&gt;</mml:mo></mml:math></inline-formula> 96 %) of convergent flows fall within <inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> at spatial resolutions of 10 and 5 km (Fig. <xref ref-type="fig" rid="F5"/>e).</p>
      <p id="d2e3777">The relative fractions of convergent flow along fronts (<inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:mi mathvariant="italic">ζ</mml:mi><mml:msup><mml:mi>f</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>) in ROMS and MPAS-O are approximately equal across all simulations <inline-formula><mml:math id="M133" display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 1 km (Fig. <xref ref-type="fig" rid="F5"/>e). At highly resolved (100–200 m) resolutions, MPAS-O has slightly greater amounts of strongly convergent flow, suggesting a growing influence of grid-scale noise. The fraction of strongly divergent flows are also similar between models across all spatial resolutions (Fig. <xref ref-type="fig" rid="F5"/>f). At spatial resolutions of 100 m, the percentage of strongly divergent and convergent flows along fronts (<inline-formula><mml:math id="M134" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:mi mathvariant="italic">δ</mml:mi><mml:msup><mml:mi>f</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>|</mml:mo><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> where <inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:mi mathvariant="italic">ζ</mml:mi><mml:msup><mml:mi>f</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>) in MPAS-O and ROMS (the sum of the left-most values in panels e and f) are equal to 55 % and 50 %, respectively.</p>
      <p id="d2e3856">Joint PDFs of vorticity versus strain rate (Fig. <xref ref-type="fig" rid="F6"/>) and divergence (Fig. <xref ref-type="fig" rid="F7"/>), following that described by <xref ref-type="bibr" rid="bib1.bibx54" id="text.65"/>, demonstrate similar behavior under periodic wind stress conditions for MPAS-O and ROMS. In both models, increasing spatial resolution increases the strength of the relationship between increasing positive vorticities and strain rates, centered around the dashed gray line at 45° highlighting regions of pure shear that are characterized by strong cyclonic vorticity (Fig. <xref ref-type="fig" rid="F6"/>). As spatial resolution increases, the relationship along this line of pure shear becomes less distinctive in both MPAS-O and ROMS. However, a clear divide between relative vorticity values at <inline-formula><mml:math id="M136" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1 (where <inline-formula><mml:math id="M137" display="inline"><mml:mi mathvariant="italic">ζ</mml:mi></mml:math></inline-formula> is equal to <inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mi>f</mml:mi></mml:mrow></mml:math></inline-formula> at the zero potential vorticity boundary) remains apparent across resolutions, although this is more visible within ROMS than MPAS-O. This is most clearly exemplified by a clear increase in shear associated with low negative relative vorticities at high spatial resolutions in MPAS-O (Fig. <xref ref-type="fig" rid="F6"/>d) that is also present but substantially diminished in ROMS (Fig. <xref ref-type="fig" rid="F6"/>h).</p>

      <fig id="F6" specific-use="star"><label>Figure 6</label><caption><p id="d2e3900">Joint PDFs of surface strain vs surface relative vorticity for MPAS-O <bold>(a–d)</bold> and ROMS <bold>(e–h)</bold> simulations over a range of spatial resolutions. Colorbar denotes, in log scale, the frequency of occurrence of these relationships. Diagonal gray lines emanating at 45° to the left and right of the origin denote regions of shear while the vertical line identified at <inline-formula><mml:math id="M139" display="inline"><mml:mrow><mml:mi>x</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> corresponds to pure strain. Regions below these diagonal lines correspond to eddies in the simulations.</p></caption>
          <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f06.png"/>

        </fig>

      <p id="d2e3927">Relationships between normalized divergence and relative vorticity for MPAS-O and ROMS are also similar, but again highlight differences in the distributions of divergence between the two models (Fig. <xref ref-type="fig" rid="F7"/>). Reflecting the differences in the shape of the PDFs (Fig. <xref ref-type="fig" rid="F5"/>c–d), the distribution of divergence vs. vorticity is more narrowly focused about the <inline-formula><mml:math id="M140" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> axis for MPAS-O than ROMS, which has a greater negative skew in divergence. However a clear barrier point at <inline-formula><mml:math id="M141" display="inline"><mml:mi mathvariant="italic">ζ</mml:mi></mml:math></inline-formula> values that are equal to <inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mi>f</mml:mi></mml:mrow></mml:math></inline-formula> remains evident in both models at resolutions <inline-formula><mml:math id="M143" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 100 m.</p>

      <fig id="F7" specific-use="star"><label>Figure 7</label><caption><p id="d2e3968">Joint PDFs of surface divergence vs. surface relative vorticity for MPAS-O <bold>(a–d)</bold> and ROMS <bold>(e–h)</bold> simulations over a range of spatial resolutions. Colorbar denotes, in log scale, the frequency of occurrence of these relationships.</p></caption>
          <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f07.png"/>

        </fig>

      <p id="d2e3983">Joint PDFs of along- and cross-frontal divergence within frontal coordinates at the surface were also computed in regions where <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:mi mathvariant="italic">ζ</mml:mi><mml:msup><mml:mi>f</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, following the approach introduced by <xref ref-type="bibr" rid="bib1.bibx21" id="text.66"/> (Fig. <xref ref-type="fig" rid="F8"/>). The distributions in both MPAS-O and ROMS show a clear rotation towards a more vertically aligned distribution (greater frontal compression and decreased shear) for both ocean models as spatial resolution increases. Ellipses fit to the model variation using principal component analysis reinforce that the rotation is increasingly aligned along the axis of cross-frontal divergence as the component parallel to the major axis becomes more closely aligned with the <inline-formula><mml:math id="M145" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> axis (Table <xref ref-type="table" rid="T2"/>). With smaller spatial scales, flows in both MPAS-O and ROMS become more convergent, as the primary axis of variability lies in the along-front direction of elevated vorticity regions. Differences in levels of divergence between MPAS-O and ROMS are also shown in Table <xref ref-type="table" rid="T2"/>, where the ratio of major to minor components of principal component analysis (PCA) variability show a somewhat consistent increase from coarser to finer scale ROMS simulations but mixed trends for MPAS-O simulations. This reinforces what is evident in  Fig. <xref ref-type="fig" rid="F8"/>, that the distribution of cross- versus along-frontal divergence values are more diffuse in MPAS-O than ROMS at all resolutions <inline-formula><mml:math id="M146" display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 500 m. Despite some differences in the angle of rotation of the primary axis of variability, the average of the distributions (<inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula>) is remarkably similar (within <inline-formula><mml:math id="M148" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>0.06) for cross-frontal divergence values between MPAS-O and ROMS across all resolutions.</p>

<table-wrap id="T2" specific-use="star"><label>Table 2</label><caption><p id="d2e4064">Mean properties of the surface frontal velocity gradient distributions are given for different idealized model resolutions. The rotation of the principle component major axis, <inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">PCA</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, is given in degrees clockwise from the <inline-formula><mml:math id="M150" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> axis; <inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:mi mathvariant="normal">major</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">minor</mml:mi></mml:mrow></mml:math></inline-formula> is the ratio of the major to minor principal component axes; and <inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:mo>〈</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>〉</mml:mo></mml:mrow></mml:math></inline-formula> is the mean cross-frontal divergence, where negative values indicate frontogenesis.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Frontogenesis Summary Statistics</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Resolution</oasis:entry>
         <oasis:entry colname="col2">Model</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">PCA</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M154" display="inline"><mml:mrow><mml:mi mathvariant="normal">major</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">minor</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M155" display="inline"><mml:mrow><mml:mo>〈</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>〉</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">10 km</oasis:entry>
         <oasis:entry colname="col2">MPAS-O</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M156" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>42.5°</oasis:entry>
         <oasis:entry colname="col4">3.72</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M157" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.113</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">ROMS</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M158" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>36.3°</oasis:entry>
         <oasis:entry colname="col4">1.90</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M159" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.091</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">5 km</oasis:entry>
         <oasis:entry colname="col2">MPAS-O</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M160" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>33.8°</oasis:entry>
         <oasis:entry colname="col4">2.66</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M161" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.152</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">ROMS</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M162" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>36.4°</oasis:entry>
         <oasis:entry colname="col4">1.97</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M163" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.211</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2 km</oasis:entry>
         <oasis:entry colname="col2">MPAS-O</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M164" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>27.9°</oasis:entry>
         <oasis:entry colname="col4">2.38</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M165" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.280</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">ROMS</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M166" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>18.1°</oasis:entry>
         <oasis:entry colname="col4">1.85</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M167" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.314</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">1 km</oasis:entry>
         <oasis:entry colname="col2">MPAS-O</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M168" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>22.4°</oasis:entry>
         <oasis:entry colname="col4">2.28</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M169" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.373</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">ROMS</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M170" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>12.6°</oasis:entry>
         <oasis:entry colname="col4">1.92</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M171" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.381</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">500 m</oasis:entry>
         <oasis:entry colname="col2">MPAS-O</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M172" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>14.6°</oasis:entry>
         <oasis:entry colname="col4">2.32</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M173" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.480</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">ROMS</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M174" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>7.2°</oasis:entry>
         <oasis:entry colname="col4">2.06</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M175" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.492</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">200 m</oasis:entry>
         <oasis:entry colname="col2">MPAS-O</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M176" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>7.5°</oasis:entry>
         <oasis:entry colname="col4">2.38</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M177" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.689</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">ROMS</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M178" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1.5°</oasis:entry>
         <oasis:entry colname="col4">2.47</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M179" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.647</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">100 m</oasis:entry>
         <oasis:entry colname="col2">MPAS-O</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M180" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1.4°</oasis:entry>
         <oasis:entry colname="col4">2.21</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M181" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.781</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">ROMS</oasis:entry>
         <oasis:entry colname="col3">0.6°</oasis:entry>
         <oasis:entry colname="col4">2.67</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M182" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.735</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <fig id="F8" specific-use="star"><label>Figure 8</label><caption><p id="d2e4636">PDFs of normalized cross-frontal (<inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow></mml:mfrac></mml:mstyle><mml:msup><mml:mi>f</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) vs. along-frontal (<inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>v</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow></mml:mfrac></mml:mstyle><mml:msup><mml:mi>f</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) surface velocity gradients for MPAS-O <bold>(a–d)</bold> and ROMS <bold>(e–h)</bold> simulations over a range of spatial resolutions, for all points associated with frontal regions (<inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:mi mathvariant="italic">ζ</mml:mi><mml:msup><mml:mi>f</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>). Colorbar denotes, in log scale, the frequency of occurrence of these relationships. Gray lines emanating from the average of these distributions (gray dots) show the principal components of variability of the distribution. The negatively sloping dashed line corresponds to zero divergence (<inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:mi mathvariant="italic">δ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>), while the positively sloping dashed line corresponds to zero effective strain (<inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">σ</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>n</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>).</p></caption>
          <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f08.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Salinity mixing</title>
      <p id="d2e4774">Plan-view plots of surface numerical mixing for both models across all resolutions are shown in Fig. <xref ref-type="fig" rid="F9"/>, at the same time as Fig. <xref ref-type="fig" rid="F2"/>. Numerical mixing is generally largest at fronts for all resolutions due to elevated salinity gradients, consistent with previous studies <xref ref-type="bibr" rid="bib1.bibx43 bib1.bibx48" id="paren.67"/>. At 1–10 km resolutions (Fig. <xref ref-type="fig" rid="F9"/>a–d, h–k), numerical mixing is noisy at the grid scale, with the spatially-averaged mixing generally decreasing as resolution increases, particularly within eddies. At sub-kilometer resolutions in MPAS-O (Fig. <xref ref-type="fig" rid="F9"/>e–g), regions with grid-scale noise in the vorticity field coincide with regions of higher numerical mixing. This is most prevalent in the 200 m simulation (Fig. <xref ref-type="fig" rid="F9"/>f). Significant patches of negative numerical mixing are visible in both models, with MPAS-O showing slightly more organized patches. The negative patches indicate tracer variance production, rather than destruction, and may reflect either anti-diffusive or dispersive numerical errors associated with the advection schemes. However, we cannot precisely determine the quantity of numerical mixing occurring at the grid scale that directly results from the tracer advection scheme or noise generated by the DVD algorithm.</p>

      <fig id="F9" specific-use="star"><label>Figure 9</label><caption><p id="d2e4793">Surface numerical salinity mixing for MPAS-O <bold>(a–g)</bold> and ROMS <bold>(h–n)</bold> at the same time as Fig. <xref ref-type="fig" rid="F2"/>.</p></caption>
          <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f09.jpg"/>

        </fig>

      <p id="d2e4810">To further quantify these differences, we examine time series of volume-averaged physical (Fig. <xref ref-type="fig" rid="F10"/>a–b) and numerical (Fig. <xref ref-type="fig" rid="F10"/>c–d) mixing for both models across all resolutions. The volume-averaging operator is defined as <inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:msup><mml:mi>V</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>∭</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mo>.</mml:mo><mml:mo mathvariant="italic">}</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">d</mml:mi><mml:mi>V</mml:mi></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math id="M189" display="inline"><mml:mi>V</mml:mi></mml:math></inline-formula> is the domain volume. The volume-averaged physical mixing is correlated with the time series of mean surface kinetic energy (Fig. <xref ref-type="fig" rid="F3"/>), growing later in MPAS-O (Fig. <xref ref-type="fig" rid="F10"/>a) than in ROMS (Fig. <xref ref-type="fig" rid="F10"/>b). Since the models were initialized with vertically uniform salinity, physical mixing is strongly influenced by restratification due to mixed-layer instabilities <xref ref-type="bibr" rid="bib1.bibx15" id="paren.68"/>, which generates vertical salinity variance that can be destroyed by mixing. In MPAS-O, the volume-averaged physical mixing reaches a steady, periodic state that exceeds ROMS by the end of the simulation. Physical mixing generally increases with resolution, particularly when kinetic energy is near its maximum.</p>

      <fig id="F10" specific-use="star"><label>Figure 10</label><caption><p id="d2e4864">Time series of volume-averaged physical <bold>(a–b)</bold> and numerical <bold>(c–d)</bold> mixing for both models across all resolutions. Thicker lines are smoothed with a PL33 filter; thinner, fainter lines are the raw outputs.</p></caption>
          <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f10.png"/>

        </fig>

      <p id="d2e4879">Volume-averaged numerical mixing (Fig. <xref ref-type="fig" rid="F10"/>c–d) partially follows the distribution of kinetic energy, peaking during eddy formation but decreasing much faster than physical mixing. This is likely because strongly convergent ageostrophic motions during frontogenesis sharpen horizontal salinity gradients. As the simulation evolves through the later phases of the frontal life cycle (instability, arrest, and decay), the destruction of salinity gradients reduces numerical mixing. For both models, volume-averaged numerical mixing generally decreases with increasing resolution, with notable exceptions. MPAS-O exhibits higher peak numerical mixing in the 2, 5, and 10 km cases than ROMS, and oscillates between positive and negative values at all resolutions. The 100–200 m simulations, especially the 100 m run, show  much more tracer variance production, likely due to excessive grid-scale noise. Peak instances of negative numerical mixing for the 100 m simulation occur between Days 15–20 and Days 25–30. The behavior may be phenomenologically similar to fossil turbulence <xref ref-type="bibr" rid="bib1.bibx17" id="paren.69"/> in that small-scale variance persists after the energetic phase, but in this case arises from numerical rather than physical processes. In ROMS, volume-averaged numerical mixing remains positive at all resolutions and consistently decreases with increasing resolution.</p>
      <p id="d2e4887">To summarize differences between models and across resolutions, we compute bulk mixing quantities (Fig. <xref ref-type="fig" rid="F11"/>), defined as the time-summed volume-averaged mixing. We normalize horizontal resolution by the initial deformation radius (5 km) to produce a dimensionless metric which may be useful for future studies. For MPAS-O, the absolute value of numerical mixing is taken at each time step to prevent negative values from artificially reducing bulk mixing. This is preferable to taking the absolute value of numerical mixing at the grid scale because the noise from the DVD algorithm would contaminate the bulk mixing estimates. The ratio of bulk numerical to physical mixing decreases with increasing resolution (Fig. <xref ref-type="fig" rid="F11"/>a), except for the 100 m MPAS-O case. In MPAS-O, this ratio decreases from 42 % at 10 km to 2.8 % at 200 m, but rises to 40 % at 100 m. In ROMS, the ratio decreases from 131 % at 10 km to 4 % at 100 m. Bulk numerical (Fig. <xref ref-type="fig" rid="F11"/>b) and physical mixing (Fig. <xref ref-type="fig" rid="F11"/>c) trends reflect these ratios.</p>

      <fig id="F11" specific-use="star"><label>Figure 11</label><caption><p id="d2e4900">Time-summed volume-averaged mixing as a function of horizontal resolution normalized by the deformation radius (5 km). <bold>(a)</bold> Bulk ratio of numerical to physical mixing, <bold>(b)</bold> bulk numerical mixing, <bold>(c)</bold> bulk physical mixing, and <bold>(d)</bold> bulk total mixing. Absolute values are used for numerical and total mixing to account for strong variance production in MPAS-O.</p></caption>
          <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f11.png"/>

        </fig>

      <p id="d2e4921">As suggested by the time series, bulk numerical mixing in ROMS exceeds MPAS-O at most resolutions. Bulk numerical mixing decreases by 90 % in ROMS from 10 km to 100 m, and by 89 % in MPAS-O from 10 km to 200 m (we exclude the 100 m MPAS-O case due to the massive increase in numerical mixing). Physical mixing increases with resolution in both models: MPAS-O shows a 52 % increase from 10 km to 100 m, while ROMS increases by nearly 200 %. At 5–10 km resolutions, MPAS-O exhibits over 50 % more physical mixing than ROMS, though differences diminish at finer resolutions. Total bulk mixing, defined as <inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="script">M</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="script">M</mml:mi><mml:mi mathvariant="normal">phy</mml:mi></mml:msub><mml:mo>|</mml:mo></mml:mrow></mml:math></inline-formula>, is shown in Fig. <xref ref-type="fig" rid="F11"/>d. Greater levels of physical mixing in MPAS-O offer a partial explanation as to why there is noticeably less frontal structure than ROMS beyond the halfway point in the simulations. At 5–10 km, ROMS has smaller total mixing than MPAS-O due to lower physical mixing; between 200 m and 2 km, total mixing estimates between both models are within 5 % of each other. For the 100 m MPAS-O simulation, total mixing increases by over 30 % due to the large rise in numerical mixing.</p>
</sec>
</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <label>4</label><title>Discussion and Conclusions</title>
      <p id="d2e4957">Two ocean models, MPAS-O and ROMS, with fundamentally different numerical grids and algorithms are found to show similar behavior in the representation of complex frontal dynamics at high spatial resolutions within an idealized configuration of the Mississippi-Atchafalaya River Plume. Statistical metrics of normalized relative vorticity, strain, and divergence confirm that both models quantitatively represent similar scaling of submesoscale processes as horizontal resolution is refined, particularly at the target mid-range resolution of 1 km. Both models demonstrate similar physical dynamics at scales larger than the grid scale that act to increase vertical mixing and restratify the water column, but additional insight can be gained by examining physical invariants (i.e., divergence) at the highest spatial resolutions. Additionally, differences in the asymmetric distribution of relative vorticity and divergence due to spatial resolution are shown to be substantially greater than those due to the choice of ocean model (Fig. <xref ref-type="fig" rid="F5"/>). These similarities are encouraging because MPAS-O, unlike ROMS, has not been exhaustively tested and tuned in a variety of submesoscale domains.</p>
      <p id="d2e4962">In this idealized domain, the greatest differences between MPAS-O and ROMS across all resolutions include the timing of baroclinic instability initiation and levels of kinetic energy as well as the peak values in the histogram distributions of relative vorticity and divergence. ROMS attains a higher level of surface kinetic energy approximately 4 d before MPAS-O across all resolutions that is also maintained for a longer period, as baroclinic instabilities across the entirety of the ROMS domain are generated nearly simultaneously (Fig. <xref ref-type="fig" rid="F3"/>). By contrast, MPAS-O tends to generate these instabilities in a more spatially concentrated area near the center of the domain at mid-range resolutions (i.e., 1 km in data archive animations), and more slowly at higher resolutions than coarser resolutions, resulting in lower average values of surface KE than ROMS earlier in the simulations. Despite differences in the timing of frontogenesis, both models eventually converge to a similar solution (Fig. <xref ref-type="fig" rid="F3"/>), a feature that is indicative of potential long-term stability for model linkages, particularly for spatial scales that are at the high-fidelity limit of MPAS-O's regional refinement capabilities demonstrated in Part 2.</p>
      <p id="d2e4969">Another key difference is the decreased structure within and surrounding fronts in MPAS-O during the second half of the simulations. We hypothesize that this is primarily due to the elevated vertical physical salinity mixing in MPAS-O relative to ROMS (Fig. <xref ref-type="fig" rid="F10"/>), which will accelerate the rate of frontal arrest and decay. These differences in physical mixing are likely because the implementations of the K-profile parameterization differ between models, with MPAS-O using the CVMix library <xref ref-type="bibr" rid="bib1.bibx66" id="paren.70"/> and ROMS using its internal KPP scheme. We return to this point again in Part 2.</p>
      <p id="d2e4977">Differences in momentum advection schemes and the resulting horizontal mixing of momentum are also significant. MPAS-O's second-order centered advection scheme necessitates explicit harmonic and biharmonic dissipation for stability <xref ref-type="bibr" rid="bib1.bibx44" id="paren.71"/>, whereas ROMS' third-order upwind scheme provides implicit, flow-adaptive biharmonic dissipation <xref ref-type="bibr" rid="bib1.bibx50" id="paren.72"/> that only requires a small amount of explicit harmonic viscosity for this domain. This leads to the conundrum where MPAS-O may insufficiently damp grid-scale noise during the frontogenic phase of the simulations and over-damps as the flow relaxes during the frontal arrest and decay phases. ROMS, in contrast, avoids this dilemma because of its flow-adaptive dissipation that effectively suppresses grid scale noise while allowing frontal-scale physical processes to persist longer, evidenced by the release of gravity waves. <xref ref-type="bibr" rid="bib1.bibx50" id="text.73"/> recommend upwinding advection schemes for exactly this reason.</p>
      <p id="d2e4990">The fairly consistent results earlier in the simulations across multiple resolutions between MPAS-O and ROMS begin to deteriorate for some metrics near the grid scale, with grid scale noise in MPAS-O apparent at resolutions equal to or finer than 500 m. MPAS-O grid scale noise is evident in areas embedded within and adjacent to regions of frontogenesis, and can also be found in regions affected by gravity waves propagating away from the fronts (Fig. <xref ref-type="fig" rid="F2"/> and data archive animation). Outside of the frontal regions, ROMS exhibits comparatively lower levels of grid scale noise and numerical noise at fine resolutions, even in the presence of gravity waves released by frontal disequilibrium (Fig. <xref ref-type="fig" rid="F9"/>m–n). At the finest resolutions (100–200 m), we find more strongly convergent/divergent flow in MPAS-O (Fig. <xref ref-type="fig" rid="F5"/>e–f) and a wider distribution of along-frontal divergence (Fig. <xref ref-type="fig" rid="F8"/>d, h). This is almost certainly due to the increased grid-scale noise, which can be identified via physical inspection of the vorticity field (Fig. <xref ref-type="fig" rid="F2"/>). Our scaling for the biharmonic viscosity was based on a grid Reynolds number of 20, tuned for coarser-resolution fully coupled simulations, but it is insufficient for sub-500 m resolutions. As a simple test (not shown) to ensure the model was not numerically pathological at these resolutions, we reran the 500 m case with double the biharmonic viscosity (grid Reynolds number of 10) and found that it sufficiently reduced grid-scale noise. Rather than tuning biharmonic viscosity for a single parameter space of submesoscale flows, a preferable path forward future work for MPAS-O and Omega is to test flow-adaptive horizontal mixing parameterizations, such as the schemes by <xref ref-type="bibr" rid="bib1.bibx33" id="text.74"/> and <xref ref-type="bibr" rid="bib1.bibx56" id="text.75"/></p>
      <p id="d2e5009">Tracer advection is also important in differentiating MPAS-O and ROMS at the domain scale through irreversible numerical mixing associated with the different advection schemes (Fig. <xref ref-type="fig" rid="F10"/>). Our analysis of numerical salinity mixing using the method developed by <xref ref-type="bibr" rid="bib1.bibx5" id="text.76"/> demonstrates significant differences between models across all resolutions. MPAS-O generally has less numerical mixing than ROMS when integrated over the domain and summed in time over a simulation (Fig. <xref ref-type="fig" rid="F11"/>). However, this is not necessarily because the numerical mixing at the grid-scale is weaker in MPAS-O; rather, MPAS-O's flux-corrected transport scheme is less diffusive than the MPDATA scheme used for ROMS. Time series of volume-averaged numerical mixing may oscillate between positive and weakly negative after the frontogenic phase in almost all MPAS-O simulations, implying the effective diffusivity becomes negative. At sub-500 m resolutions, volume-averages of numerical mixing in MPAS-O become more strongly negative, suggesting that the accumulation of kinetic energy and tracer variance at the grid scale may be activating spurious modes in the tracer advection scheme. In fact, this is precisely what is observed for the finest resolution MPAS-O simulation when analyzing the time series of EKE (Fig. <xref ref-type="fig" rid="F3"/>c). Determining what exactly drives this apparent variance production is therefore a clear direction for future research. Whereas with ROMS, volume-averages of numerical mixing remain positive definite (Fig. <xref ref-type="fig" rid="F10"/>) and intuitively decrease after peaking during the frontogenic phase. We note that MPDATA is one of several tracer advection schemes available in ROMS, so we expect the relative amount of numerical mixing between models to change if a different advection scheme was used <xref ref-type="bibr" rid="bib1.bibx27 bib1.bibx67 bib1.bibx48" id="paren.77"/>.</p>
      <p id="d2e5027">This behavior may also provide insight into the results of <xref ref-type="bibr" rid="bib1.bibx39" id="text.78"/>, who used volume-integrals of resting potential energy framework to suggest that MPAS-O exhibits less numerical mixing than other ocean models across several idealized test cases. Except in simulations without prescribed physical mixing, the resting potential energy method quantifies the total (physical <inline-formula><mml:math id="M191" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> numerical) mixing in a model. Strong variance production can drive down bulk estimates of numerical mixing, which are further muddled by using methods that quantify total mixing. Thus, MPAS-O does not necessarily have less numerical mixing than other models.</p>
      <p id="d2e5040">The submesoscale model comparisons presented here are useful for demonstrating the relative skill of differing numerical approaches when representing small-scale dynamics (particularly for MPAS-O), identifying potential targets for model improvements to specific parameterizations, and providing a pathway for more rigorous model evaluation approaches in realistic domains that have not been previously compared. MPAS-O in particular has been used for mesoscale studies and its expected performance in these smaller, more energetic environments was unclear at the beginning of the study. The overall effect of submesoscale processes in the world's oceans are best answered through modeling efforts, as continuous direct observations of these rapidly evolving and ephemeral flows remain difficult. Additionally, use of numerical models is essential in better understanding fine-scale atmosphere-ocean feedbacks and their impact on global-scale heat transfers. Comparisons of the physical dynamics between  structured and unstructured regional ocean models are relatively uncommon, and many published investigations have focused on differences between two commonly used ocean models, ROMS and FVCOM (<xref ref-type="bibr" rid="bib1.bibx9" id="altparen.79"/>; <xref ref-type="bibr" rid="bib1.bibx24" id="altparen.80"/>). To our knowledge, no comparisons of physical dynamics in existing ocean models have been made against MPAS-O in a regional or idealized context. Constructive comparisons such as this one allow researchers to better determine what dynamics can be simulated by state-of-the-art modeling tools, and provide opportunities for further exploration where models diverge. Additionally, these efforts can help inform decisions regarding the development of training datasets for machine learning approaches, like those that have been previously applied to observations and model outputs for surface dynamics (e.g., <xref ref-type="bibr" rid="bib1.bibx68" id="altparen.81"/>).</p>
      <p id="d2e5052">The comparable dynamical responses of MPAS-O and ROMS support the hypothesis that these two models similarly represent submesoscale dynamics at multiple similar spatial resolutions, which is of particular interest for research areas that may be under-represented in global models (e.g., coastal domains and open-ocean regions where overturning dynamics play an outsized role in basin-scale circulation patterns). While coupling between the two models will not occur at the same spatial resolution, we can infer from these results that there is unlikely to be a dynamical mismatch at whatever resolution is chosen. A coupled approach would allow for an overall coarser global mesh in MPAS-O that, when coupled to ROMS, may require only a fraction of the increased computational demand necessary for a variable resolution mesh to increase local spatial resolution to submesoscale-permitting resolutions (i.e., <inline-formula><mml:math id="M192" display="inline"><mml:mo>≤</mml:mo></mml:math></inline-formula> 2 km). Additional challenges that may remain in regionally refining MPAS-O to submesoscale resolution (e.g., representing the distribution of complex bathymetry and river discharge spreading in coastal areas) may be avoided by nesting a high-resolution ROMS model within a global simulation. Increased refinement in the spatial resolution of specific areas can help to build a more complete understanding of critical feedbacks like those associated with freshwater hosing and Atlantic Meridional Overturning Circulation weakening, the departure point and vertical mixing associated with western boundary currents, and net carbon fluxes between highly productive coastal systems and the open ocean. Ongoing and future work will better quantify how this nested approach informs global responses, as well as its strengths and limitations in different ocean regions.</p>
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      </body>
    <back><app-group>

<app id="App1.Ch1.S1">
  <label>Appendix A</label><title>Effects of sloping bathymetry</title>
      <p id="d2e5074">We configure Bichan at 1 km horizontal resolution with sloping bathymetry to examine how vertical coordinate differences may influence model behavior. All aspects of the configuration are the same as the flat bottom case for 1 km, except variables changed by sloping bathymetry. Because the along-channel velocity is configured in thermal wind balance and our goal is to replicate typical bathymetric gradients found in the nGoM, we configure the bathymetry with two Gaussian depressions with depths ranging from 10 to 75 m (Fig. <xref ref-type="fig" rid="FA1"/>):

          <disp-formula id="App1.Ch1.S1.E18" content-type="numbered"><label>A1</label><mml:math id="M193" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi>h</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:msub><mml:mi>h</mml:mi><mml:mi>s</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>h</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>h</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mfenced open="[" close=""><mml:mrow><mml:mi>exp⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>y</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>y</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow><mml:mi mathvariant="italic">σ</mml:mi></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mfenced open="" close="]"><mml:mrow><mml:mo>+</mml:mo><mml:mi>exp⁡</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>y</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>y</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mi mathvariant="italic">σ</mml:mi></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

        where <inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> m, <inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">75</mml:mn></mml:mrow></mml:math></inline-formula> m, <inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">7.5</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">4</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> m, <inline-formula><mml:math id="M197" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.75</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> m, and <inline-formula><mml:math id="M198" display="inline"><mml:mrow><mml:mi mathvariant="italic">σ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">4</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> m. This configuration produces a maximum bottom slope of <inline-formula><mml:math id="M199" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>h</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>y</mml:mi><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">0.0026</mml:mn></mml:mrow></mml:math></inline-formula>, roughly twice the mean slope of the nGoM <xref ref-type="bibr" rid="bib1.bibx20 bib1.bibx69" id="paren.82"/>.</p>
      <p id="d2e5316">A uniformly sloping bottom with  <inline-formula><mml:math id="M200" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>h</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.001</mml:mn></mml:mrow></mml:math></inline-formula> would generate unrealistically strong along-channel velocities (2–3 m s<sup>−1</sup>) near the northern boundaries based on thermal wind balance. In contrast, using two Gaussian depressions produces localized regions of enhanced depth where the velocity increases with depth, promoting submesoscale activity, while maintaining weaker velocities elsewhere. A single depression with the same minimum depth and slope would leave most of the domain quiescent.</p>
      <p id="d2e5351">The ROMS vertical grid is configured as a pure sigma coordinate by setting the surface and bottom refinement parameters to zero and the critical depth to <inline-formula><mml:math id="M202" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">16</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> m. This results in layers ranging from 0.3–2.5 m. In MPAS-O, the vertical grid is configured with the <inline-formula><mml:math id="M203" display="inline"><mml:mrow><mml:msup><mml:mi>z</mml:mi><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> coordinate using partial bottom cells <xref ref-type="bibr" rid="bib1.bibx38" id="paren.83"/> with uniform layer thickness of 2.5 m. The baroclinic timestep for both models is 60 s and the barotropic timestep is 6 s.</p>
      <p id="d2e5379">Time series of volume-averaged kinetic energy (Fig. <xref ref-type="fig" rid="FA2"/>) show the development and evolution of eddies in the sloping bathymetry configuration. We use volume-averaged kinetic energy rather than mean surface kinetic energy, as in the flat-bottom case, to capture contributions from the full water column. Eddy formation becomes noticeable around Day 5 in both models, with kinetic energy peaking between Days 8–14. Throughout the simulation, the volume-averaged kinetic energy remains closely matched between MPAS-O and ROMS. Cross-sections of along-channel averaged <inline-formula><mml:math id="M204" display="inline"><mml:mi mathvariant="bold-italic">u</mml:mi></mml:math></inline-formula> velocity during a period of peak kinetic energy (Fig. <xref ref-type="fig" rid="FA1"/>) are also similar, with no indication of spurious mixing or flow impedance from the partial bottom cells. Physically, the vertical shear of <inline-formula><mml:math id="M205" display="inline"><mml:mi mathvariant="bold-italic">u</mml:mi></mml:math></inline-formula> is largely controlled by the lateral density gradient through thermal wind balance. In the deeper regions of the Gaussian depressions – and between them – this produces a weak flow reversal near the bottom. The reversal is slightly stronger in ROMS because it better resolves the near-bottom shear with the terrain-following coordinate. </p>

      <fig id="FA1"><label>Figure A1</label><caption><p id="d2e5404">Cross-sections of along-channel averaged <inline-formula><mml:math id="M206" display="inline"><mml:mi mathvariant="bold-italic">u</mml:mi></mml:math></inline-formula> velocity on Day 11 for <bold>(a)</bold> ROMS and <bold>(b)</bold> MPAS-O. The thin black lines are the depth of layer centers.</p></caption>
        
        <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f12.png"/>

      </fig>

      <fig id="FA2"><label>Figure A2</label><caption><p id="d2e5430">Time series of volume-averaged kinetic energy for the sloping bottom simulations.</p></caption>
        
        <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f13.png"/>

      </fig>


</app>

<app id="App1.Ch1.S2">
  <label>Appendix B</label><title>Verification of the DVD algorithm</title>

      <fig id="FB1"><label>Figure B1</label><caption><p id="d2e5453"><bold>(a)</bold> Across-channel-averaged tracer and <bold>(b)</bold> numerical mixing at <inline-formula><mml:math id="M207" display="inline"><mml:mrow><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula> s.</p></caption>
        <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f14.png"/>

      </fig>

      <p id="d2e5479">The implementation of the DVD algorithm by <xref ref-type="bibr" rid="bib1.bibx5" id="text.84"/> into MPAS-O is verified using a linear advection test. MPAS-O is configured as a single-layer doubly-periodic domain with <inline-formula><mml:math id="M208" display="inline"><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mi>x</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>L</mml:mi><mml:mi>y</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula> m and a water depth of 1 m. The horizontal resolution is <inline-formula><mml:math id="M209" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> m, and the timestep is <inline-formula><mml:math id="M210" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> s. Model snapshots are saved at each timestep. The active tracers, denoted by <inline-formula><mml:math id="M211" display="inline"><mml:mrow><mml:mi>c</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, are initialized as a top-hat distribution varying only in <inline-formula><mml:math id="M212" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula>:

              <disp-formula id="App1.Ch1.S2.E19" content-type="numbered"><label>B1</label><mml:math id="M213" display="block"><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi>c</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:mfenced open="{" close=""><mml:mtable columnspacing="1em" rowspacing="0.2ex" class="cases" columnalign="left left" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mn mathvariant="normal">35</mml:mn><mml:mo>≤</mml:mo><mml:mi>x</mml:mi><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">65</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mtext>otherwise</mml:mtext><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:math></disp-formula>

        The normal velocity <inline-formula><mml:math id="M214" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mi mathvariant="normal">n</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is rotated to be zonally uniform such that <inline-formula><mml:math id="M215" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mi mathvariant="normal">n</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> m s<sup>−1</sup> and <inline-formula><mml:math id="M217" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>. All momentum and tracer tendencies are disabled except for tracer advection, so the tracer conservation equation reduces to a linear advection equation:

          <disp-formula id="App1.Ch1.S2.E20" content-type="numbered"><label>B2</label><mml:math id="M218" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>c</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mi>u</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>c</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

        The analytical solution is

          <disp-formula id="App1.Ch1.S2.E21" content-type="numbered"><label>B3</label><mml:math id="M219" display="block"><mml:mrow><mml:mi>c</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>c</mml:mi><mml:mspace linebreak="nobreak" width="-0.125em"/><mml:mfenced open="(" close=")"><mml:mrow><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>-</mml:mo><mml:mi>u</mml:mi><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi mathvariant="normal">mod</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:msub><mml:mi>L</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

        Thus, <inline-formula><mml:math id="M220" display="inline"><mml:mrow><mml:mi>c</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>c</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">100</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> analytically, but numerical mixing redistributed the tracer. Figure <xref ref-type="fig" rid="FB1"/> shows the across-channel-averaged tracer relative to the analytical solution and the corresponding numerical mixing. Positive and negative numerical mixing are observed on both sides of the top-hat. The negative values of numerical mixing result from the flux-corrector, which imposes variance production to enforce monotonicity.</p>
      <p id="d2e5819">The tracer variance <inline-formula><mml:math id="M221" display="inline"><mml:mrow><mml:msup><mml:msup><mml:mi>c</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mi>c</mml:mi><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>, with the volume-averaged tracer <inline-formula><mml:math id="M222" display="inline"><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula>, is not conserved due to numerical mixing. Multiplication of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E21"/>) by <inline-formula><mml:math id="M223" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi>c</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> yields

          <disp-formula id="App1.Ch1.S2.E22" content-type="numbered"><label>B4</label><mml:math id="M224" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:msup><mml:mi>c</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:msup><mml:mi>c</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="script">M</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

        Volume-integration yields

          <disp-formula id="App1.Ch1.S2.E23" content-type="numbered"><label>B5</label><mml:math id="M225" display="block"><mml:mrow><mml:mo movablelimits="false">∭</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:msup><mml:mi>c</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">d</mml:mi><mml:mi>V</mml:mi><mml:mo>=</mml:mo><mml:mo movablelimits="false">∭</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="script">M</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">d</mml:mi><mml:mi>V</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

        The DVD algorithm can therefore be verified when the volume-integrated variance tendency and the integrated numerical mixing term are equal to machine precision for each timestep, as shown in Fig. <xref ref-type="fig" rid="FB2"/>. The initial strong gradients of the top-hat tracer are smoothed by the flux-corrected transport scheme <xref ref-type="bibr" rid="bib1.bibx55" id="paren.85"/>. Over 40 timesteps, the volume-integrated variance drops by roughly ten orders of magnitude, at which point the remaining gradients are sufficiently resolved by FCT, and the top hat evolves with minimal smoothing.</p>

      <fig id="FB2"><label>Figure B2</label><caption><p id="d2e5996">Volume-integrated tracer variance budget for the doubly periodic channel. The first several timesteps are omitted because <inline-formula><mml:math id="M226" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="script">M</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub><mml:mo>|</mml:mo></mml:mrow></mml:math></inline-formula> is undefined at <inline-formula><mml:math id="M227" display="inline"><mml:mrow><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> and to account for the startup transient and two-step lag associated with the second-order Adams-Bashforth time-stepping scheme.</p></caption>
        <graphic xlink:href="https://gmd.copernicus.org/articles/19/10321/2026/gmd-19-10321-2026-f15.png"/>

      </fig>

</app>
  </app-group><notes notes-type="codedataavailability"><title>Code and data availability</title>

      <p id="d2e6036">The following can be found at <ext-link xlink:href="https://doi.org/10.5281/zenodo.23370806" ext-link-type="DOI">10.5281/zenodo.23370806</ext-link> <xref ref-type="bibr" rid="bib1.bibx23" id="paren.86"/>, which is an archived Zenodo repository: the E3SM branch used to produce the MPAS-O simulations, the development branch used to produce the ROMS simulations, the model output and code needed for preprocessing, run control, and figure reproduction, and the videos of the simulation outputs referenced within the manuscript.</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d2e6048">KEH and DRS contributed to the conceptualization, data curation, formal analysis, investigation, methodology, software, validation, visualization, writing the original draft, review &amp; editing. RDH contributed to the conceptualization, funding acquisition, methodology, resources, software, project administration, supervision, review &amp; editing. DE contributed to the resources, software, writing the original draft, review &amp; editing. KMS contributed to software, validation, review &amp; editing. MRP and KU contributed to the review &amp; editing.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d2e6054">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d2e6060">Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. The authors bear the ultimate responsibility for providing appropriate place names. Views expressed in the text are those of the authors and do not necessarily reflect the views of the publisher.</p>
  </notes><ack><title>Acknowledgements</title><p id="d2e6066">All authors were supported by the Study for Exascale Advances in a High-Resolution Ocean using ROMS Coupled to E3SM (SEAHORÇE) project funded through the U.S. Department of Energy, Office of Science and Office of Advanced Scientific Computing Research Scientific Discovery through Advanced Computing (SciDAC) program. The authors acknowledge that large language models were used to assist with code cleaning in the Zenodo archive and for grammar editing of the main text. This research used resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility using NERSC award ASCR-ERCAP0031014. Additional computational resources for this research were provided by COMPASS, a coastal research program funded by the Biological and Environmental Science Program of the U.S. Department of Energy's Office of Science.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d2e6071">This research has been supported by the U.S. Department of Energy, Office of Science (grant no. DE-FOA-0002585).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d2e6077">This paper was edited by Andrew Yool and reviewed by Sergey Danilov and one anonymous referee.</p>
  </notes><ref-list>
    <title>References</title>

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