<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing with OASIS Tables v3.0 20080202//EN" "journalpub-oasis3.dtd">
<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0" article-type="research-article"><?xmltex \bartext{Development and technical paper}?>
  <front>
    <journal-meta><journal-id journal-id-type="publisher">GMD</journal-id><journal-title-group>
    <journal-title>Geoscientific Model Development</journal-title>
    <abbrev-journal-title abbrev-type="publisher">GMD</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Geosci. Model Dev.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1991-9603</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/gmd-15-8395-2022</article-id><title-group><article-title>An ensemble Kalman filter system with the Stony Brook <?xmltex \hack{\break}?>Parallel Ocean Model
v1.0</article-title><alt-title>An ensemble Kalman filter system with sbPOM v1.0</alt-title>
      </title-group><?xmltex \runningtitle{An ensemble Kalman filter system with sbPOM v1.0}?><?xmltex \runningauthor{S. Ohishi et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff2 aff3 aff7">
          <name><surname>Ohishi</surname><given-names>Shun</given-names></name>
          <email>shun.ohishi@riken.jp</email>
        <ext-link>https://orcid.org/0000-0003-4043-8886</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Hihara</surname><given-names>Tsutomu</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3 aff5">
          <name><surname>Aiki</surname><given-names>Hidenori</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Ishizaka</surname><given-names>Joji</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-0398-1572</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Miyazawa</surname><given-names>Yasumasa</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Kachi</surname><given-names>Misako</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff2 aff7">
          <name><surname>Miyoshi</surname><given-names>Takemasa</given-names></name>
          <email>takemasa.miyoshi@riken.jp</email>
        <ext-link>https://orcid.org/0000-0003-3160-2525</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>RIKEN Center for Computational Science, Kobe, 6500047, Japan</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>RIKEN Cluster for Pioneering Research, Kobe, 6500047, Japan</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Institute for Space-Earth Environmental Research, Nagoya University,
Nagoya, 4648601, Japan</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Japan Fisheries Information Service Center, Tokyo, 1040055, Japan</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Application Laboratory, Japan Agency for Marine-Earth Science and
Technology, Yokohama, 2360001, Japan</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>Earth Observation Research Center, Japan Aerospace Exploration Agency,
Tsukuba, 3058505, Japan</institution>
        </aff>
        <aff id="aff7"><label>7</label><institution>RIKEN Interdisciplinary Theoretical and Mathematical Sciences Program
(iTHEMS), Kobe, 6500047, Japan</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Shun Ohishi (shun.ohishi@riken.jp) and Takemasa Miyoshi
(takemasa.miyoshi@riken.jp)</corresp></author-notes><pub-date><day>18</day><month>November</month><year>2022</year></pub-date>
      
      <volume>15</volume>
      <issue>22</issue>
      <fpage>8395</fpage><lpage>8410</lpage>
      <history>
        <date date-type="received"><day>15</day><month>February</month><year>2022</year></date>
           <date date-type="rev-request"><day>4</day><month>March</month><year>2022</year></date>
           <date date-type="rev-recd"><day>20</day><month>October</month><year>2022</year></date>
           <date date-type="accepted"><day>20</day><month>October</month><year>2022</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2022 Shun Ohishi et al.</copyright-statement>
        <copyright-year>2022</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022.html">This article is available from https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022.html</self-uri><self-uri xlink:href="https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022.pdf">The full text article is available as a PDF file from https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d1e182">This study develops an ensemble Kalman filter
(EnKF)-based regional ocean data assimilation system in which the local
ensemble transform Kalman filter (LETKF) is implemented with version 1.0 of the Stony Brook
Parallel Ocean Model (sbPOM) to assimilate satellite and in situ
observations at a daily frequency. A series of sensitivity experiments are
performed with various settings of the incremental analysis update (IAU) and
covariance inflation methods, for which the relaxation-to-prior
perturbations and spread (RTPP and RTPS, respectively) and multiplicative
inflation (MULT) are considered. We evaluate the geostrophic balance and the
analysis accuracy compared with the control experiment in which the IAU and
covariance inflation are not applied. The results show that the IAU improves
the geostrophic balance, degrades the accuracy, and reduces the ensemble
spread, and that the RTPP and RTPS have the opposite effect. The experiment
using a combination of the IAU and RTPP results in a significant improvement for both balance and analysis accuracy when the RTPP parameter is 0.8–0.9.
The combination of the IAU and RTPS improves the balance when the RTPS
parameter is <inline-formula><mml:math id="M1" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula> and increases the analysis accuracy for parameter
values between 1.0 and 1.1, but the balance and analysis accuracy are not
improved significantly at the same time. The experiments with MULT inflating the
forecast ensemble spread by 5 % do not demonstrate sufficient skill in
maintaining the balance and reproducing the surface flow field regardless of
whether the IAU is applied or not. The 11 d ensemble forecast experiments
show consistent results. Therefore, the combination of the IAU and RTPP with
a parameter value of 0.8–0.9 is found to be the best setting for the EnKF-based
ocean data assimilation system.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e204">The ensemble Kalman filter (EnKF; Evensen, 1994,
2003) estimates optimal analyses using model forecasts and observations with
their error covariance. The EnKF is advantageous in that it includes flow-dependent
forecast errors from an ensemble of model forecasts and is relatively easy
to implement with various models. Therefore, various EnKF-based ocean
data assimilation systems have been developed thus far (see Table 1).</p>
      <p id="d1e207">The number of available observations has increased dramatically with enhanced
observations of temperature and salinity in the ocean interior by Argo
profiling floats as well as measurements of sea surface temperature, salinity, and
height (SST, SSS, and SSH, respectively) by satellites. The Himawari-8 geostationary
satellite (Bessho et al., 2016;
Kurihara et al., 2016) has an infrared sensor that has been observing SSTs in the Pacific
region since July 2015, although there are missing values where cloud
obscures the sea surface. Its geostationary orbit and short observation
interval allow Himawari-8 to provide better daily coverage within the
observation area than a polar-orbiting satellite with a microwave sensor,
such as the Global Change Observation Mission-Water (GCOM-W;
<uri>https://gportal.jaxa.jp/gpr</uri>, last access: 11 November 2022), which can capture SSTs even in cloudy regions.
Satellite SSS observations by the Soil Moisture and Ocean Salinity (SMOS) mission
started in June 2010, and previous studies have demonstrated the positive
impacts of these observations, using their ocean data assimilation systems, to better represent the
ocean interior structure, such as mixed and barrier layers, low-salinity
water caused by river discharge, and prediction of the El Niño–Southern
Oscillation
(ENSO;
Chakraborty et al., 2014; Hackert et al., 2014; Toyoda et al., 2015). The
Surface Water and Ocean Topography (SWOT; <uri>https://swot.jpl.nasa.gov/</uri>, last access: 11 November 2022)
satellite that has a new type of altimeter which can observe SSH anomalies (SSHAs)
in two dimensions over a 120 km wide swath is scheduled for launch in 2022.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e219">Overview of the EnKF-based ocean data assimilation systems developed
after 2010. The abbreviations used in the table are as follows: PEODAS – Predictive Ocean Atmosphere Model for
Australia (PAOMA) Ensemble Ocean Data Assimilation System, DEnKF –
deterministic EnKF (Sakov and Oke, 2008),
LETKF – local ensemble transform Kalman filter
(Hunt et al., 2007), EAKF – ensemble
adjustment Kalman filter (Anderson, 2001),
LESKTF – local error subspace Kalman transform filter
(Nerger et al., 2012), <inline-formula><mml:math id="M2" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> – temperature, <inline-formula><mml:math id="M3" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> –
salinity, SST – sea surface temperature, SSH – sea surface height, and MULT –
multiplicative inflation. Adaptive MULT was proposed by
Miyoshi (2011). Dashes are used to indicate no
application. “Inflated obs. error” in TOPAZ4 indicates that observation
errors are inflated when ensemble analyses are calculated.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.80}[.80]?><oasis:tgroup cols="9">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:colspec colnum="7" colname="col7" align="left"/>
     <oasis:colspec colnum="8" colname="col8" align="left"/>
     <oasis:colspec colnum="9" colname="col9" align="left"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Name</oasis:entry>
         <oasis:entry colname="col2">PEODAS</oasis:entry>
         <oasis:entry colname="col3">TOPAZ4</oasis:entry>
         <oasis:entry colname="col4">Miyazawa et al.</oasis:entry>
         <oasis:entry colname="col5">Karspeck et al.</oasis:entry>
         <oasis:entry colname="col6">Penny et al.</oasis:entry>
         <oasis:entry colname="col7">Penny et al.</oasis:entry>
         <oasis:entry colname="col8">Baduru et al.</oasis:entry>
         <oasis:entry colname="col9">Brüning et al.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(Yin et al., 2011)</oasis:entry>
         <oasis:entry colname="col3">(Sakov et al., 2012)</oasis:entry>
         <oasis:entry colname="col4">(2012)</oasis:entry>
         <oasis:entry colname="col5">(2013)</oasis:entry>
         <oasis:entry colname="col6">(2013)</oasis:entry>
         <oasis:entry colname="col7">(2015)</oasis:entry>
         <oasis:entry colname="col8">(2019)</oasis:entry>
         <oasis:entry colname="col9">(2021)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Domain</oasis:entry>
         <oasis:entry colname="col2">Global</oasis:entry>
         <oasis:entry colname="col3">North Atlantic</oasis:entry>
         <oasis:entry colname="col4">South of Japan</oasis:entry>
         <oasis:entry colname="col5">Global</oasis:entry>
         <oasis:entry colname="col6">Quasi-global</oasis:entry>
         <oasis:entry colname="col7">Global</oasis:entry>
         <oasis:entry colname="col8">Indian</oasis:entry>
         <oasis:entry colname="col9">North Sea</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">and Arctic (release)</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
         <oasis:entry colname="col8">Ocean</oasis:entry>
         <oasis:entry colname="col9">and Baltic Sea</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Horizontal resolution</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M4" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">12–16 km <inline-formula><mml:math id="M5" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M6" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">36</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">36</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M7" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M8" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.58</mml:mn></mml:mrow></mml:math></inline-formula>–1<inline-formula><mml:math id="M9" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo></mml:mrow></mml:math></inline-formula><?xmltex \hack{\hfill\break}?></oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M11" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">12</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col9">0.9–5 km <inline-formula><mml:math id="M12" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">(longitude <inline-formula><mml:math id="M13" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> latitude)</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">12–16 km</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7">0.25–0.5<inline-formula><mml:math id="M14" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8">1/12<inline-formula><mml:math id="M15" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col9">0.9–5 km</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Vertical resolution</oasis:entry>
         <oasis:entry colname="col2">25 <inline-formula><mml:math id="M16" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>-levels</oasis:entry>
         <oasis:entry colname="col3">28 hybrid layers</oasis:entry>
         <oasis:entry colname="col4">31 <inline-formula><mml:math id="M17" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>-layers</oasis:entry>
         <oasis:entry colname="col5">60 <inline-formula><mml:math id="M18" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>-levels</oasis:entry>
         <oasis:entry colname="col6">20 <inline-formula><mml:math id="M19" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>-levels</oasis:entry>
         <oasis:entry colname="col7">40 <inline-formula><mml:math id="M20" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>-levels</oasis:entry>
         <oasis:entry colname="col8">40 <inline-formula><mml:math id="M21" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>-layers</oasis:entry>
         <oasis:entry colname="col9">25–36 layers</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Perturbed boundary</oasis:entry>
         <oasis:entry colname="col2">Atmosphere</oasis:entry>
         <oasis:entry colname="col3">Atmosphere</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
         <oasis:entry colname="col6">Atmosphere</oasis:entry>
         <oasis:entry colname="col7">Atmosphere</oasis:entry>
         <oasis:entry colname="col8">Atmosphere</oasis:entry>
         <oasis:entry colname="col9">–</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">condition</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">EnKF</oasis:entry>
         <oasis:entry colname="col2">Simplified EnKF</oasis:entry>
         <oasis:entry colname="col3">DEnKF</oasis:entry>
         <oasis:entry colname="col4">LETKF</oasis:entry>
         <oasis:entry colname="col5">EAKF</oasis:entry>
         <oasis:entry colname="col6">LETKF</oasis:entry>
         <oasis:entry colname="col7">LETKF</oasis:entry>
         <oasis:entry colname="col8">LETKF</oasis:entry>
         <oasis:entry colname="col9">LESKTF</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Ensemble size</oasis:entry>
         <oasis:entry colname="col2">11</oasis:entry>
         <oasis:entry colname="col3">100</oasis:entry>
         <oasis:entry colname="col4">20</oasis:entry>
         <oasis:entry colname="col5">48</oasis:entry>
         <oasis:entry colname="col6">40</oasis:entry>
         <oasis:entry colname="col7">28</oasis:entry>
         <oasis:entry colname="col8">80</oasis:entry>
         <oasis:entry colname="col9">12</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Assimilation window</oasis:entry>
         <oasis:entry colname="col2">5 d</oasis:entry>
         <oasis:entry colname="col3">7 d</oasis:entry>
         <oasis:entry colname="col4">2 d</oasis:entry>
         <oasis:entry colname="col5">1 d</oasis:entry>
         <oasis:entry colname="col6">5 d</oasis:entry>
         <oasis:entry colname="col7">5 d</oasis:entry>
         <oasis:entry colname="col8">5 d</oasis:entry>
         <oasis:entry colname="col9">12 h</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Assimilated data</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M22" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M23" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">SST, SSH, <inline-formula><mml:math id="M24" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M25" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula>, ice</oasis:entry>
         <oasis:entry colname="col4">SST, SSH, <inline-formula><mml:math id="M26" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M27" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M28" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M29" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M30" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M31" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M32" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M33" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8">SST, <inline-formula><mml:math id="M34" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M35" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col9">SST</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Covariance inflation</oasis:entry>
         <oasis:entry colname="col2">Additive inflation</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">MULT</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
         <oasis:entry colname="col6">Adaptive</oasis:entry>
         <oasis:entry colname="col7">–</oasis:entry>
         <oasis:entry colname="col8">MULT</oasis:entry>
         <oasis:entry colname="col9">–</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">MULT</oasis:entry>
         <oasis:entry colname="col7"/>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">IAU/Nudging</oasis:entry>
         <oasis:entry colname="col2">–</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
         <oasis:entry colname="col7">–</oasis:entry>
         <oasis:entry colname="col8">–</oasis:entry>
         <oasis:entry colname="col9">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Period</oasis:entry>
         <oasis:entry colname="col2">1979–2006</oasis:entry>
         <oasis:entry colname="col3">1991–2019</oasis:entry>
         <oasis:entry colname="col4">08–28 Feb 2010</oasis:entry>
         <oasis:entry colname="col5">1998–2005</oasis:entry>
         <oasis:entry colname="col6">1997–2003</oasis:entry>
         <oasis:entry colname="col7">1991–1998</oasis:entry>
         <oasis:entry colname="col8">Aug 2016–</oasis:entry>
         <oasis:entry colname="col9">2021–present</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
         <oasis:entry colname="col8">Sep 2018</oasis:entry>
         <oasis:entry colname="col9"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Other</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Inflated obs. error</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <p id="d1e1100">To take advantage of such enhanced observations, frequent data assimilation
is important. Here, dynamical imbalances in the analysis field may cause an
initial shock with high-frequency gravity waves and may degrade the analysis
accuracy. He et al. (2020) described the
relationship between the assimilation interval and accuracy using an
atmospheric data assimilation system. As seen in Table 1, most of the recent
ocean data assimilation systems have an assimilation interval longer than 5 d; in particular, 5 d and 7 d assimilation intervals are employed in the
existing ocean reanalysis datasets of the Predictive Ocean Atmosphere Model
for Australia Ensemble Ocean Data Assimilation System
(PEODAS; Yin et al., 2011) and TOPAZ4
(Sakov et al., 2012), respectively. PEODAS assimilates only in situ temperature and salinity data, whereas
TOPAZ4 uses all types of observations but with inflation of observation
errors. Although the ocean data assimilation systems constructed by
Karspeck et al. (2013) and
Miyazawa et al. (2012) have short assimilation intervals
of 1 and 2 d, respectively, the former assimilates only in situ
temperature and salinity data, and the latter conducts a data assimilation
experiment for a short period of 20 d because unrealistic fields are
detected if the experiment is performed over several months (Yasumasa Miyazawa,
2022, personal communication). Although Brüning et al. (2021) recently established regional data assimilation systems for the
North Sea and Baltic Sea at a frequent interval of 12 h, only satellite
SSTs are assimilated. Therefore, the existing systems might mitigate the
effects of initial shocks by using the longer assimilation interval,
inflating observation errors, and reducing the number of assimilated
observations. This is also the case for atmosphere–ocean coupled data
assimilation systems
(e.g., Brune et al., 2015; Chang et al., 2013; Counillon et al., 2016; Tang et al.,
2020). To provide accurate analyses in an EnKF-based ocean data assimilation
system in which satellite and in situ observations are assimilated at a
frequent interval, it is necessary to investigate an optimal setting for
both dynamical balance and accuracy.</p>
      <p id="d1e1103">The incremental analysis update (IAU; Bloom et
al., 1996; see Sect. 2.1) has been proposed to reduce noise from
high-frequency gravity waves associated with initial shocks. Covariance
relaxation methods such as relaxation-to-prior perturbations (RTPP; Zhang et al., 2004) and relaxation-to-prior spread (RTPS;
Whitaker and Hamill, 2012) (see
Sect. 2.3), in which the analysis ensemble perturbations are relaxed towards
the forecast ensemble perturbations, would also mitigate the initial shock
(Houtekamer and Zhang,
2016; Ying and Zhang, 2015). In EnKF-based ocean data assimilation systems,
the method used to apply the analysis update to the model evolution and the technique used to inflate
the ensemble spread could make significant differences for the dynamical
balance and accuracy. However, the IAU and RTPP/RTPS have not been widely
used in EnKF-based ocean data assimilation systems (Table 1). Therefore,
this study aims to develop an EnKF-based ocean data assimilation system with
a frequent assimilation interval of 1 d in order to take advantage of frequent
satellite observations and to explore the optimal settings by performing
sensitivity experiments with various settings of the IAU and covariance
inflation methods.</p>
      <p id="d1e1106">This paper is organized as follows: Sect. 2 describes the data and methods
of IAU, RTPP, and other schemes as well as how to evaluate geostrophic balance
and accuracy relative to observations; details of the EnKF-based ocean
data assimilation system and sensitivity experiment are described in Sect. 3; Sect. 4 presents the results for geostrophic balance and accuracy in
the sensitivity experiments; Sect. 5 compares the prescribed
multiplicative inflation (MULT) parameter with the sensitivity experiment
with RTPP and IAU; and Sect. 6 provides a summary.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Data and methods</title>
      <p id="d1e1117">In this section, we provide details of the methods used to alleviate some of
the problems associated with high-frequency assimilation. Section 2.1
presents the IAU designed to cut off noise from high-frequency gravity
waves, and Sect. 2.2 describes perturbed boundary conditions. Covariance
inflation methods to prevent the underestimation of ensemble-based forecast
error covariance by various factors, such as the limited ensemble size and
model imperfections, are introduced in Sect. 2.3, and the methods used to
evaluate geostrophic balance and accuracy relative to observations are given in Sect. 2.4.</p>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>IAU</title>
      <p id="d1e1127">In this study, we implement the IAU (Bloom et al.,
1996) based on existing ocean data assimilation systems
(Balmaseda
et al., 2015; Martin et al., 2015). The procedure for one assimilation cycle
is as follows: (i) conduct model integration up to the middle of an
assimilation window; (ii) assimilate observations within the window and save
the analysis increments in temperature, salinity, and horizontal velocity;
and (iii) conduct model integration over the assimilation window adding the
increments equally distributed to each time step. The IAU reduces noise from
high-frequency gravity waves associated with initial shocks, but the
computational cost of the model integration is 1.5 times that of the
standard method in which the analyses performed at the beginning of the window
are used for the model initial conditions. Following Miyazawa
et al. (2012), all analysis variables (SSH, temperature, salinity, and
horizontal velocities) are used for initial conditions in the standard
method. Although there are various IAU methods, the SSH increments are not
included in most of the existing ocean data assimilation systems
(Table 2 of Martin et al.,
2015), mainly because the SSH increments tend to cause initial shocks. Even
without the SSH increments, the SSH would be modified properly in response
to the temperature and salinity increments. Therefore, we adopt the analysis
increments of temperature, salinity, and horizontal velocity except for SSH.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Perturbed boundary conditions</title>
      <p id="d1e1138">Following previous studies
(Kunii
and Miyoshi, 2012; Penny et al., 2013; Torn et al., 2006), atmospheric and
lateral boundary conditions are artificially perturbed for each ensemble
member. Atmospheric forcing of the <inline-formula><mml:math id="M36" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>th ensemble member at a time <inline-formula><mml:math id="M37" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>,
<inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">w</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, is given by
            <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M39" display="block"><mml:mrow><mml:msup><mml:mi mathvariant="bold">w</mml:mi><mml:mrow><mml:mfenced open="(" close=")"><mml:mi>i</mml:mi></mml:mfenced></mml:mrow></mml:msup><mml:mfenced open="(" close=")"><mml:mi>t</mml:mi></mml:mfenced><mml:mo>=</mml:mo><mml:mi mathvariant="bold">w</mml:mi><mml:mfenced close=")" open="("><mml:mi>t</mml:mi></mml:mfenced><mml:mo>+</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mfenced open="[" close="]"><mml:mrow><mml:mi mathvariant="bold">w</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mi>t</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mi>n</mml:mi></mml:mfrac></mml:mstyle><mml:msubsup><mml:mo>∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mi mathvariant="bold">w</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:mi>t</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:mi mathvariant="bold">w</mml:mi><mml:mfenced close=")" open="("><mml:mi>t</mml:mi></mml:mfenced></mml:mrow></mml:math></inline-formula> is atmospheric forcing at a time <inline-formula><mml:math id="M41" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>,
<inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo>(</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is an arbitrary constant, <inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:mi mathvariant="bold">w</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mi>t</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula> is atmospheric forcing at the same time as <inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:mi mathvariant="bold">w</mml:mi><mml:mfenced close=")" open="("><mml:mi>t</mml:mi></mml:mfenced></mml:mrow></mml:math></inline-formula> but in a different year, and <inline-formula><mml:math id="M45" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> (<inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula>) is the ensemble size.
Here, the year in <inline-formula><mml:math id="M47" display="inline"><mml:mrow><mml:mi mathvariant="bold">w</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mi>t</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula> is changed every
month. As is clear from Eq. (1), the ensemble mean of the atmospheric
forcing <inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">w</mml:mi><mml:mrow><mml:mfenced open="(" close=")"><mml:mi>i</mml:mi></mml:mfenced></mml:mrow></mml:msup><mml:mfenced close=")" open="("><mml:mi>t</mml:mi></mml:mfenced></mml:mrow></mml:math></inline-formula> is equivalent to
<inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:mi mathvariant="bold">w</mml:mi><mml:mfenced close=")" open="("><mml:mi>t</mml:mi></mml:mfenced></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e1393">Lateral boundary conditions for each ensemble member are obtained from a
monthly mean global ocean reanalysis dataset for different years. Namely,
the ensemble mean of the lateral boundary condition corresponds to a monthly
climatology. These perturbed atmospheric and lateral boundary conditions
play a role equivalent to additive inflation
(Houtekamer and Zhang, 2016).</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Covariance inflation methods</title>
      <p id="d1e1405">Three covariance inflation methods (MULT, RTPP, and RTPS) are adopted in
this study. MULT inflates forecast error covariance <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:msup><mml:mi>P</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> by a factor of
<inline-formula><mml:math id="M51" display="inline"><mml:mrow><mml:mi mathvariant="italic">ρ</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>(</mml:mo><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>:
            <disp-formula id="Ch1.E2" content-type="numbered"><label>2</label><mml:math id="M52" display="block"><mml:mrow><mml:msubsup><mml:mi>P</mml:mi><mml:mi mathvariant="normal">inf</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msubsup><mml:mo>=</mml:mo><mml:mi mathvariant="italic">ρ</mml:mi><mml:msubsup><mml:mi>P</mml:mi><mml:mi mathvariant="normal">orig</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msubsup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where the subscripts inf and orig denote inflated and original (i.e.,
before inflation), respectively. Both RTPP and RTPS restore the analysis
ensemble perturbation towards the forecast ensemble perturbations
maintaining the analysis ensemble mean, as represented by

                <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M53" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E3"><mml:mtd><mml:mtext>3</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msubsup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">inf</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msubsup><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msup><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:msubsup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">orig</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msubsup><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi mathvariant="normal">and</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E4"><mml:mtd><mml:mtext>4</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msubsup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">inf</mml:mi><mml:mrow><mml:mi mathvariant="normal">a</mml:mi><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mrow><mml:mi mathvariant="normal">f</mml:mi><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">orig</mml:mi><mml:mrow><mml:mi mathvariant="normal">a</mml:mi><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">orig</mml:mi><mml:mrow><mml:mi mathvariant="normal">a</mml:mi><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle><mml:msubsup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">orig</mml:mi><mml:mrow><mml:mi mathvariant="normal">a</mml:mi><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            Here, <inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:mi mathvariant="bold">X</mml:mi><mml:mo>[</mml:mo><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mrow><mml:mfenced close=")" open="("><mml:mn mathvariant="normal">1</mml:mn></mml:mfenced></mml:mrow></mml:msup><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mrow><mml:mfenced open="(" close=")"><mml:mi>i</mml:mi></mml:mfenced></mml:mrow></mml:msup><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mrow><mml:mfenced close=")" open="("><mml:mi mathvariant="bold">n</mml:mi></mml:mfenced></mml:mrow></mml:msup><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>)</mml:mo><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> is the
ensemble perturbation matrix whose <inline-formula><mml:math id="M55" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>th column consists of the perturbations
of the <inline-formula><mml:math id="M56" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>th ensemble member, where <inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mrow><mml:mfenced open="(" close=")"><mml:mi>i</mml:mi></mml:mfenced></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>
and <inline-formula><mml:math id="M58" display="inline"><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> are the state vector of the <inline-formula><mml:math id="M59" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>th ensemble member and
ensemble mean; the superscripts <inline-formula><mml:math id="M60" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M61" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> denote analysis and forecast;
and <inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M63" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are the relaxation parameters in
the RTPP and RTPS, respectively. <inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> is the ensemble spread of
the <inline-formula><mml:math id="M65" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>th variable of state vector <inline-formula><mml:math id="M66" display="inline"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:math></inline-formula>, as represented by
            <disp-formula id="Ch1.E5" content-type="numbered"><label>5</label><mml:math id="M67" display="block"><mml:mrow><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mfenced><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:msup><mml:mi mathvariant="bold">X</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msup><mml:mi mathvariant="bold">X</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:mfenced><mml:mi>T</mml:mi></mml:msup></mml:mrow></mml:msqrt><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          In the RTPP and RTPS, the relaxation parameters are generally defined
between 0 and 1, where <inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> correspond to no
inflation, and <inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> correspond to the inflated analysis ensemble spread being equivalent to the forecast ensemble spread. RTPP and RTPS are thought to have side effects in
maintaining the dynamic balance
(Houtekamer and Zhang,
2016; Ying and Zhang, 2015).</p>
</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Validation</title>
<sec id="Ch1.S2.SS4.SSS1">
  <label>2.4.1</label><title>Nonlinear balance equation (NBE)</title>
      <p id="d1e1947">Surface horizontal velocity can be represented as the sum of surface
geostrophic and ageostrophic velocities under the geostrophic approximation.
Here, the ageostrophic velocity is defined as being caused by the surface wind
stress curl except for the vertical geostrophic shear, according to the
classical Ekman theory (Cronin and Tozuka, 2016). In
this study, the atmospheric field is not included in the model state vector;
therefore, there are no differences between the forecast and analysis
ageostrophic velocities. Consequently, writing the geostrophic balance
equation in terms of analysis increments, we obtain
              <disp-formula id="Ch1.E6" content-type="numbered"><label>6</label><mml:math id="M72" display="block"><mml:mrow><mml:mi>f</mml:mi><mml:mi mathvariant="bold-italic">k</mml:mi><mml:mo>×</mml:mo><mml:mi mathvariant="italic">δ</mml:mi><mml:mi mathvariant="bold">u</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mi>g</mml:mi><mml:msub><mml:mi mathvariant="bold">∇</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mi mathvariant="italic">η</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M73" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> is the vertical component of the Coriolis parameter, <inline-formula><mml:math id="M74" display="inline"><mml:mi mathvariant="bold-italic">k</mml:mi></mml:math></inline-formula>
is a unit vector in the vertical upward direction, <inline-formula><mml:math id="M75" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula> is the analysis
increment, <inline-formula><mml:math id="M76" display="inline"><mml:mi mathvariant="bold">u</mml:mi></mml:math></inline-formula> is the horizontal velocity at the sea surface, <inline-formula><mml:math id="M77" display="inline"><mml:mi>g</mml:mi></mml:math></inline-formula>
(<inline-formula><mml:math id="M78" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">9.8</mml:mn></mml:mrow></mml:math></inline-formula> m s<inline-formula><mml:math id="M79" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) is the gravitational acceleration,
<inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">∇</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mo>∂</mml:mo><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mo>∂</mml:mo><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the horizontal gradient
operator, and <inline-formula><mml:math id="M81" display="inline"><mml:mi mathvariant="italic">η</mml:mi></mml:math></inline-formula> is the SSH. By taking <inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:math></inline-formula> of the <inline-formula><mml:math id="M83" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> component of Eq. (6) plus <inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:math></inline-formula> of the <inline-formula><mml:math id="M85" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> component, Eq. (6) can be reduced to the nonlinear
balance equation
(NBE; Shibuya et
al., 2015; Zhang et al., 2001):
              <disp-formula id="Ch1.E7" content-type="numbered"><label>7</label><mml:math id="M86" display="block"><mml:mrow><mml:mo>-</mml:mo><mml:mi>f</mml:mi><mml:mi mathvariant="italic">δ</mml:mi><mml:mi mathvariant="italic">ζ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mi mathvariant="italic">δ</mml:mi><mml:mi>u</mml:mi><mml:mo>+</mml:mo><mml:mi>g</mml:mi><mml:msubsup><mml:mi mathvariant="bold">∇</mml:mi><mml:mi mathvariant="normal">h</mml:mi><mml:mn mathvariant="bold">2</mml:mn></mml:msubsup><mml:mi mathvariant="italic">δ</mml:mi><mml:mi mathvariant="italic">η</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:mi mathvariant="italic">ζ</mml:mi><mml:mo>(</mml:mo><mml:mo>=</mml:mo><mml:mo>∂</mml:mo><mml:mi>v</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>x</mml:mi><mml:mo>-</mml:mo><mml:mo>∂</mml:mo><mml:mi>u</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the relative vorticity at the
sea surface, and <inline-formula><mml:math id="M88" display="inline"><mml:mrow><mml:mi mathvariant="italic">β</mml:mi><mml:mo>(</mml:mo><mml:mo>=</mml:mo><mml:mo>∂</mml:mo><mml:mi>f</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the
planetary vorticity gradient. If geostrophic balance is not satisfied in the
analysis field, there is an absolute residual of the NBE, <inline-formula><mml:math id="M89" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE:
              <disp-formula id="Ch1.E8" content-type="numbered"><label>8</label><mml:math id="M90" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">NBE</mml:mi><mml:mo>≡</mml:mo><mml:mfenced open="|" close="|"><mml:mrow><mml:mo>-</mml:mo><mml:mi>f</mml:mi><mml:mi mathvariant="italic">δ</mml:mi><mml:mi mathvariant="italic">ζ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mi mathvariant="italic">δ</mml:mi><mml:mi>u</mml:mi><mml:mo>+</mml:mo><mml:mi>g</mml:mi><mml:msubsup><mml:mi mathvariant="bold">∇</mml:mi><mml:mi mathvariant="normal">h</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mi mathvariant="italic">δ</mml:mi><mml:mi mathvariant="italic">η</mml:mi></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:mfenced open="|" close="|"><mml:mrow><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>⋅</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula> denotes taking the absolute value.
A smaller (larger) <inline-formula><mml:math id="M92" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE indicates more (less) geostrophic balance in
the analysis field. Few initial shocks would occur if the analysis
increments of SSH and surface horizontal velocity satisfy the geostrophic
balance.</p>
</sec>
<sec id="Ch1.S2.SS4.SSS2">
  <label>2.4.2</label><title>Improvement ratio (IR)</title>
      <p id="d1e2316">To compare the geostrophic balance and accuracy among sensitivity
experiments using a statistical method, we calculate improvement ratios
(IRs) of area-averaged <inline-formula><mml:math id="M93" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE and root-mean-square deviations (RMSDs)
relative to observations as represented by

                  <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M94" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E9"><mml:mtd><mml:mtext>9</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi mathvariant="normal">IR</mml:mi><mml:mi mathvariant="normal">N</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mfenced open="(" close=")"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">NBE</mml:mi></mml:mrow></mml:mfenced><mml:mi mathvariant="normal">CTL</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">NBE</mml:mi><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">EXP</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">NBE</mml:mi><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">CTL</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>×</mml:mo><mml:mn mathvariant="normal">100</mml:mn><mml:mo>,</mml:mo><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi mathvariant="normal">and</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E10"><mml:mtd><mml:mtext>10</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="normal">IR</mml:mi><mml:mi mathvariant="normal">R</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mfenced close=")" open="("><mml:mi mathvariant="normal">RMSD</mml:mi></mml:mfenced><mml:mi mathvariant="normal">CTL</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="normal">RMSD</mml:mi><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">EXP</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="normal">RMSD</mml:mi><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">CTL</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>×</mml:mo><mml:mn mathvariant="normal">100</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

              respectively. The subscripts CTL and EXP indicate control and
sensitivity experiments, respectively. Significant improvement and
degradation of the dynamical balance and accuracy are detected by applying
the bootstrap method, where the IRs of the area-averaged <inline-formula><mml:math id="M95" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE and
RMSDs are resampled for 10 000 cycles, and a 99 % confidence level is used
to detect the significance in all sensitivity assimilation experiments.</p>
</sec>
<sec id="Ch1.S2.SS4.SSS3">
  <label>2.4.3</label><title>Observations</title>
      <p id="d1e2458">To validate the accuracy of the sensitivity experiments, we use observational
gridded SSH and SSHA datasets from Archiving Validation and Interpretation
of Satellite Oceanographic data (AVISO; Ducet et al.,
2000) with a horizontal resolution of 0.25<inline-formula><mml:math id="M96" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>, in situ surface
horizontal velocity from surface drifting buoys of the Global Drifter
Program (Elipot et al., 2016), in situ
temperature and salinity in the depth range 1–525 m, and horizontal
velocity in the 8–36 m  depth range at 32.3<inline-formula><mml:math id="M97" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 144.6<inline-formula><mml:math id="M98" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E,
south of the Kuroshio Extension (KE) from the Kuroshio Extension Observatory
(KEO) buoy (<uri>https://www.pmel.noaa.gov/ocs/</uri>, last access: 11 November 2022; see Fig. 5a). The mean dynamical
ocean topography (MDOT) of the AVISO is estimated from a geoid model,
satellite altimetry, and in situ drifter buoy data. The AVISO dataset is not
an independent observational dataset because satellite SSHAs are used for
the assimilation in this study, whereas the surface drifter and KEO buoys
are independent. Although validation in the ocean interior might not be
sufficient, this is due to the limitation of available independent
observations.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e2494">Overview of the regional ocean model in the ocean data
assimilation system.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Ocean model</oasis:entry>
         <oasis:entry colname="col2">sbPOM (Jordi and Wang, 2012)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Model domain</oasis:entry>
         <oasis:entry colname="col2">Northwestern Pacific (15–50<inline-formula><mml:math id="M99" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 117–180<inline-formula><mml:math id="M100" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Horizontal resolution</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.25</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.25</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Vertical layer</oasis:entry>
         <oasis:entry colname="col2">50 <inline-formula><mml:math id="M102" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>-layers</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Initial conditions</oasis:entry>
         <oasis:entry colname="col2">WOA18 (Locarnini et al., 2019; Zweng et al., 2019)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Atmospheric forcing</oasis:entry>
         <oasis:entry colname="col2">JRA-55 (Kobayashi et al., 2015)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">River discharge</oasis:entry>
         <oasis:entry colname="col2">TE-Global (<uri>https://www.eorc.jaxa.jp/water/</uri>, last access: 11 November 2022)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Lateral boundary condition</oasis:entry>
         <oasis:entry colname="col2">SODA, version 3.7.2 (Carton et al., 2018)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Spin-up period</oasis:entry>
         <oasis:entry colname="col2">01 Jan 2011–06 Jul 2015</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>EnKF-based ocean data assimilation system</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Ocean model</title>
      <p id="d1e2654">The <inline-formula><mml:math id="M103" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>-coordinate regional ocean model used in this study is based on version 1.0 of the
Stony Brook Parallel Ocean Model (sbPOM;
Jordi and Wang, 2012) and constructed for the
northwestern Pacific region (15–50<inline-formula><mml:math id="M104" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 117–180<inline-formula><mml:math id="M105" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E) with a horizontal resolution of
0.25<inline-formula><mml:math id="M106" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> and 50 <inline-formula><mml:math id="M107" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>-layers (Table 2). The bottom topography is
derived from ETOPO1, a 1 arcmin global relief model of Earth's surface
(Amante and Eakins, 2009). We apply a Gaussian filter with
<inline-formula><mml:math id="M108" display="inline"><mml:mi>e</mml:mi></mml:math></inline-formula>-folding scales of 200 km to the topography to reduce the pressure gradient
errors in <inline-formula><mml:math id="M109" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>-coordinate models caused by steep bottom slopes
(Mellor et al., 1994) and fulfill the condition
<inline-formula><mml:math id="M110" display="inline"><mml:mrow><mml:mfenced open="|" close="|"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>H</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>/</mml:mo><mml:mfenced close="|" open="|"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>H</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math id="M111" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
and <inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> are bottom topographies at adjacent grids. Monthly (seasonal)
temperature and salinity climatologies from the World Ocean Atlas 2018
(WOA18;
Locarnini et al., 2019; Zweng et al., 2019) with a horizontal resolution of
1<inline-formula><mml:math id="M113" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> and 57 (102) layers are used for an initial condition over
depths shallower (deeper) than 1500 m. Lateral boundary conditions for
temperature, salinity, and horizontal velocity are obtained from version 3.7.2 of Simple
Ocean Data Assimilation (SODA;
Carton et al., 2018) with a horizontal resolution of
0.5<inline-formula><mml:math id="M114" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> and 50 layers. Here, to satisfy volume conservation, flow
relaxation (Guo et al., 2003) is applied
to the horizontal velocity at the lateral boundary. The Japanese 55-year
Reanalysis (JRA-55; Kobayashi et al.,
2015) with horizontal and temporal resolutions of 1.25<inline-formula><mml:math id="M115" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> and 6 h, respectively, is adopted for the atmospheric boundary conditions,
including air temperature and specific humidity at 2 m, wind velocity at 10 m, shortwave radiation, total cloud fraction, sea level pressure, and
precipitation. We also use river discharge from the Japan Aerospace
Exploration Agency (JAXA)'s land surface and river simulation system,
Today's Earth Global (TE-Global; <uri>https://www.eorc.jaxa.jp/water/</uri>, last access: 11 November 2022), with horizontal
and temporal resolutions of 0.25<inline-formula><mml:math id="M116" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> and 3 h, respectively. The
atmospheric and lateral boundary conditions are perturbed as described in
Sect. 2.2, except for the rainfall and river discharge.</p>
      <p id="d1e2830">The model is driven by wind stresses as well as heat and freshwater fluxes using
bulk formulae in which bulk coefficients are estimated from the Coupled
Ocean–Atmosphere Response Experiment (COARE), version 3.5, bulk algorithm
(Brodeau et
al., 2017; Edson et al., 2013). The horizontal diffusivity coefficient is
calculated by a Smagorinsky type formulation with a coefficient of 0.1
(Smagorinsky et al., 1965) and is
assumed to be one-fifth of the horizontal viscosity coefficient. The
vertical diffusivity coefficient is estimated by the Level 2.5 version of
Nakanishi and Niino (2009). The model is spun up
from 1 January 2011 to 6 July 2015 using the initial condition with no
motion. During the spin-up period, simulated temperatures and salinity are
nudged towards the monthly and seasonal climatologies from WOA18 with a
90 d timescale to damp northward overshooting of the Kuroshio. We have
confirmed that the perturbed boundary conditions substantially increase the
ensemble spread even with the nudging (not shown).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><?xmltex \currentcnt{3}?><label>Table 3</label><caption><p id="d1e2836">Overview of data assimilation in the ocean data
assimilation system.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Assimilation method</oasis:entry>
         <oasis:entry colname="col2">LETKF (Hunt et al., 2007; Miyoshi and Yamane, 2007)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Ensemble size</oasis:entry>
         <oasis:entry colname="col2">100</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Assimilation cycle</oasis:entry>
         <oasis:entry colname="col2">1 d</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Observations</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SST</oasis:entry>
         <oasis:entry colname="col2">Himawari-8 (Bessho et al., 2016; Kurihara et al., 2016)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">GCOM-W (<uri>http://www.ghrsst.org</uri>, last access: 11 November 2022)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SSS</oasis:entry>
         <oasis:entry colname="col2">SMOS (<uri>https://earth.esa.int</uri>, last access: 11 November 2022)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">SMAP (<uri>https://www.jpl.nasa.gov</uri>, last access: 11 November 2022)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SSH</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">– SSHA</oasis:entry>
         <oasis:entry colname="col2">DUACS multi-mission satellite data (<uri>https://marine.copernicus.eu/</uri>, last access: 11 November 2022)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">– MDOT</oasis:entry>
         <oasis:entry colname="col2">Climatology of model outputs in a spin-up period (2012–2014)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">GTSPP (Sun et al., 2010)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Temperature and salinity</oasis:entry>
         <oasis:entry colname="col2">AQC Argo data, version 1.2a</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(<uri>https://www.jamstec.go.jp/argo_research/dataset/aqc/index_dataset.html</uri>, last access: 11 November 2022)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Horizontal localization scale</oasis:entry>
         <oasis:entry colname="col2">300 km</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Vertical localization scale</oasis:entry>
         <oasis:entry colname="col2">100 m</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Observation error</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SST</oasis:entry>
         <oasis:entry colname="col2">1.5 <inline-formula><mml:math id="M117" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SSS</oasis:entry>
         <oasis:entry colname="col2">0.3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SSH</oasis:entry>
         <oasis:entry colname="col2">0.2 m</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Temperature</oasis:entry>
         <oasis:entry colname="col2">1.5 <inline-formula><mml:math id="M118" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Salinity</oasis:entry>
         <oasis:entry colname="col2">0.3</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Gross error check</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SST</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M120" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SSS</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M121" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SSH</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M122" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> m</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Temperature</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M124" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Salinity</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Assimilation period</oasis:entry>
         <oasis:entry colname="col2">07 Jul 2015–31 Dec 2016</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Data assimilation</title>
      <p id="d1e3213">We implement the three-dimensional local ensemble transform Kalman filter
(3D-LETKF;
Hunt et al., 2007; Miyoshi and Yamane, 2007) with 100 ensemble members to
assimilate the following observations on a 1 d assimilation interval
(Table 3): satellite SSTs from Himawari-8 and GCOM-W, SSS from the SMOS
(<uri>http://www.esa.int/Applications/Observing_the_Earth/SMOS</uri>, last access: 11 November 2022) and Soil Moisture Active Passive (SMAP) version 4.3
(Meissner et al., 2018), SSH consisting
of satellite SSH anomalies from the Copernicus Marine Environment Monitoring
Service (CMEMS; <uri>http://marine.copernicus.eu/</uri>, last access: 11 November 2022) and MDOT estimated from
simulated SSH averaged in 2012–2014, and in situ temperature and salinity
from the Global Temperature and Salinity Profile Programme
(GTSPP; Sun et al., 2010) and
Advanced automatic QC (AQC) Argo Data version 1.2a
(<uri>https://www.jamstec.go.jp/argo_research/dataset/aqc/index_dataset.html</uri>, last access: 11 November 2022). We exclude satellite
SSS within 100 km of the coasts, SSH for bottom topography shallower than
200 m, in situ temperature and salinity duplicated between the GTSPP and AQC
Argo datasets, and observations without the best quality flags or whose differences
from the forecasts are larger than the values in the gross error check in
Table 3. Following
Miyazawa et al. (2012) and Penny et al. (2013), the localization scales based on a
Gaussian function are chosen to be 300 km and 100 m in the horizontal and
vertical directions, respectively. An observational error covariance matrix
is assumed to be diagonal using the observation errors in Table 3.</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Sensitivity experiments</title>
      <p id="d1e3234">We conduct sensitivity experiments combining the IAU and covariance
inflation methods (no inflation (NO INFL), RTPP, RTPS, and MULT) to
investigate their impacts on the geostrophic balance and accuracy. We set
the relaxation parameters in the RTPP and RTPS experiments to <inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.9</mml:mn></mml:mrow></mml:math></inline-formula> without the IAU and to <inline-formula><mml:math id="M127" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">0.6</mml:mn><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">1.2</mml:mn></mml:mrow></mml:math></inline-formula> with the IAU, and we set the inflation
parameter to <inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:mi mathvariant="italic">ρ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">1.05</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> (inflating the forecast ensemble spread by
5 %) in the MULT experiments, regardless of the application of the IAU. In
this study, we do not explore all values of the relaxation and inflation
parameters because of the limitations of computational resources. Hereafter,
we refer to the RTPP experiments implemented with and without the IAU as the
RTPP<inline-formula><mml:math id="M129" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and RTPP experiments, respectively, and we refer to the RTPP<inline-formula><mml:math id="M130" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment
with a relaxation parameter of 0.5 as the RTPP05<inline-formula><mml:math id="M131" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment.
Kotsuki et al. (2017) indicated that the RTPP and RTPS do
not consider the model error explicitly and that the optimal relaxation
parameter may be larger than 1.0. Therefore, we perform experiments with a
relaxation parameter value <inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>. To clarify the effects of the IAU and
covariance inflation methods, the NO INFL experiment is defined as a control
experiment in this study (see Eqs. 9 and 10).</p>
      <p id="d1e3344">We integrate the LETKF-based ocean data assimilation system from 7 July 2015
at the start date of the Himawari-8 observations to 31 December 2016,
applying the SSS nudging with 90 d timescale to damp a surface freshening
drift, as in the model spin-up described in Sect. 3.1. Furthermore, we
conduct 11 d ensemble forecast experiments initialized on the first day of
each month in 2016 by the forecasts from the NO INFL, NO INFL<inline-formula><mml:math id="M133" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU, RTPP09,
RTPP09<inline-formula><mml:math id="M134" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU, RTPS09, and RTPS09<inline-formula><mml:math id="M135" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments, with the SSS nudging applied
with a 90 d timescale. We estimate <inline-formula><mml:math id="M136" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE from the ensemble analysis
increments on days 1 and 16 of each month, the RMSDs from the daily averaged
ensemble mean analyses and forecasts, and the ensemble spread from the
daily mean ensemble analyses. As described in Sect. 2.4.2, the
statistical analyses are applied to IRs of area-averaged <inline-formula><mml:math id="M137" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE and
analysis RMSDs in all analysis experiments. The results of the RTPP11<inline-formula><mml:math id="M138" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU
and RTPP12<inline-formula><mml:math id="M139" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments are not shown because numerical instability
developed.</p>
</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Results</title>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Geostrophic balance</title>
      <p id="d1e3413">We first compare the geostrophic balance for the various sensitivity
experiments using spatiotemporally averaged <inline-formula><mml:math id="M140" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE over the whole
system domain for 2016 (Fig. 1). The NO INFL<inline-formula><mml:math id="M141" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment has the best
geostrophic balance with significant improvement relative to the NO INFL
experiment; thus, the IAU plays a role in enhancing the balance, probably
because the IAU reduces noise of the high-frequency gravity waves associated
with initial shocks. This result is consistent with
Yan et al. (2014), who
demonstrated that the IAU reduces the spurious oscillation of vertical velocity
in twin experiments using a relatively idealized EnKF-based ocean data
assimilation system. In contrast, as the RTPP09 and RTPS09 experiments
show significantly larger <inline-formula><mml:math id="M142" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE than the NO INFL experiment, RTPP
and RTPS contribute to breaking the balance. The MULT<inline-formula><mml:math id="M143" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and MULT
experiments give such a large <inline-formula><mml:math id="M144" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE (<inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.11</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:mn mathvariant="normal">5.22</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M147" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively) that the MULT breaks the
balance considerably even if the IAU is applied.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Figure}?><label>Figure 1</label><caption><p id="d1e3502">Spatiotemporally averaged <inline-formula><mml:math id="M148" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE over the whole domain for
2016 in the NO INFL (black star), RTPP (red), RTPS (blue), NO INFL<inline-formula><mml:math id="M149" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU
(gray), RTPP<inline-formula><mml:math id="M150" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU (orange), and RTPS<inline-formula><mml:math id="M151" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU (cyan) experiments as a function
of the relaxation parameters. Open circles and triangles indicate
significant improvement and degradation relative to the NO INFL experiment
at a 99 % confidence level, respectively, and closed circles and triangles
denote improvement and degradation relative to the NO INFL experiment with no significant differences. The RTPS12<inline-formula><mml:math id="M152" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU, MULT<inline-formula><mml:math id="M153" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU, and MULT experiments show
significant degradation with an averaged <inline-formula><mml:math id="M154" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE of <inline-formula><mml:math id="M155" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.94</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.11</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, and
<inline-formula><mml:math id="M157" display="inline"><mml:mrow><mml:mn mathvariant="normal">5.22</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M158" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively (not shown). The
RTPP<inline-formula><mml:math id="M159" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments for the relaxation parameters of <inline-formula><mml:math id="M160" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">1.1</mml:mn></mml:mrow></mml:math></inline-formula> are not shown because numerical instability developed.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022-f01.png"/>

        </fig>

      <p id="d1e3650">The RTPP<inline-formula><mml:math id="M161" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and RTPS<inline-formula><mml:math id="M162" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments provide significant improvement
when the relaxation parameters are <inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">0.9</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M164" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>, respectively. The RTPP11<inline-formula><mml:math id="M165" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment becomes
numerically unstable in December 2015, and the RTPS11<inline-formula><mml:math id="M166" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment also
significantly degrades the balance; thus, relaxation parameters larger
than 1.0 do not appear to be appropriate for the EnKF-based ocean data
assimilation system. The combinations of the IAU and RTPP/RTPS, in which the
relaxation parameters are set to <inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">0.9</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M168" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>, appear to maintain geostrophic balance, likely because the
IAU counteracts the RTPP/RTPS by improving the balance.</p>
      <p id="d1e3743">To investigate spatial characteristics of the geostrophic balance, <inline-formula><mml:math id="M169" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>
NBE is temporally averaged over the whole year 2016 (Fig. 2). Here, the
RTPP09<inline-formula><mml:math id="M170" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and RTPS11<inline-formula><mml:math id="M171" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments are shown from the RTPP<inline-formula><mml:math id="M172" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and
RTPS<inline-formula><mml:math id="M173" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments because they have the best accuracy, as seen in Sect. 4.2. The NO INFL, RTPP09, and RTPS09 experiments produce less-balanced
fields in the midlatitude region, especially around the KE (Fig. 2a, c, e).
In the RTPS11<inline-formula><mml:math id="M174" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment, the balance is also lost in higher-latitude
regions (Fig. 2f). In the MULT and MULT<inline-formula><mml:math id="M175" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments, there are almost
no balanced regions with <inline-formula><mml:math id="M176" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE smaller than <inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.5</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M178" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (not shown). The NO INFL<inline-formula><mml:math id="M179" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and RTPP09<inline-formula><mml:math id="M180" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments
show substantial improvement around the KE region, although a relatively
large <inline-formula><mml:math id="M181" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE remains along the KE in the RTPP09<inline-formula><mml:math id="M182" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment (Fig. 2b, d). Thus, in general, although the balance in the analysis field is not
maintained around the KE region, this imbalance is substantially reduced in
the NO INFL<inline-formula><mml:math id="M183" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and RTPP09<inline-formula><mml:math id="M184" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><?xmltex \currentcnt{2}?><?xmltex \def\figurename{Figure}?><label>Figure 2</label><caption><p id="d1e3878"><inline-formula><mml:math id="M185" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> NBE (colors) and SSH (white contours) averaged over 2016
in the <bold>(a)</bold> NO INFL, <bold>(b)</bold> NO INFL<inline-formula><mml:math id="M186" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU, <bold>(c)</bold> RTPP09, <bold>(d)</bold> RTPP09<inline-formula><mml:math id="M187" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU, <bold>(e)</bold> RTPS09, and <bold>(f)</bold> RTPS11<inline-formula><mml:math id="M188" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments. Thin (thick) contour intervals are 0.2 m (1.0 m).</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022-f02.png"/>

        </fig>

</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Accuracy</title>
<sec id="Ch1.S4.SS2.SSS1">
  <label>4.2.1</label><title>Surface flow field</title>
      <p id="d1e3948">We evaluate the accuracy of the surface flow field in the sensitivity
experiments, calculating the analysis RMSDs relative to the AVISO
observational SSH and SSHA gridded datasets as well as surface zonal and
meridional velocity from the drifter buoys. We also estimate the ensemble
spread in observational space. As described in Sect. 2.4.3, the AVISO
dataset is not independent, as it uses satellite SSHAs assimilated in
our system, whereas the drifter buoys are independent. The different results
from the SSH and SSHA RMSDs are caused by the different MDOT between the
AVISO dataset and the system, as described in Sects. 2.4.3 and 3.2,
respectively. The analysis RMSDs and ensemble spreads are averaged over the
whole domain for 2016 in the SSH and SSHA fields (Fig. 3) and the surface
zonal and meridional velocity fields (Fig. 4). Compared with the NO INFL
experiment, the NO INFL<inline-formula><mml:math id="M189" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment has significantly larger RMSDs and
smaller ensemble spreads in most of the variables, whereas the RTPP09 and
RTPS09 experiments show significantly smaller RMSDs and larger spreads
(Figs. 3, 4). This indicates that the IAU has a significant effect on
reducing the accuracy in the surface flow field because the relatively small
ensemble spread leads to small analysis increments and because the IAU does
not use the SSH analysis increments. However, the small analysis increments
result in a better dynamical balance, as shown in Sect. 4.1. The result
is consistent with Yan et al. (2014), who demonstrated that the IAU degrades the accuracy of SSH, temperature,
and horizontal velocities using twin experiments. In contrast, the RTPP and
RTPS lead to significant improvement by inflating the ensemble spread. The
large analysis increments caused by the large ensemble spread might reduce
the dynamical balance. The MULT and MULT<inline-formula><mml:math id="M190" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments yield poor
accuracy and very large ensemble spreads in the flow fields; for example,
the averaged SSH RMSDs of 0.22 and 0.24 m and the averaged SSH and SSHA
ensemble spreads of 0.41 and 0.74 m, respectively. Thus, the MULT does not
have sufficient skill in reproducing the flow field.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><?xmltex \currentcnt{3}?><?xmltex \def\figurename{Figure}?><label>Figure 3</label><caption><p id="d1e3967">As in Fig. 1 but for the analysis RMSDs of <bold>(a)</bold> SSH and <bold>(b)</bold> SSHA
relative to the AVISO dataset. Panel <bold>(c)</bold> shows the spatiotemporally averaged ensemble
spreads of SSH and SSHA over the whole domain for 2016 in observational
space (circles). The RMSDs of SSH and SSHA in the RTPS12<inline-formula><mml:math id="M191" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment
are 0.164 and 0.137 m, respectively (not shown).</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022-f03.png"/>

          </fig>

      <p id="d1e3992">In both RTPP<inline-formula><mml:math id="M192" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and RTPS<inline-formula><mml:math id="M193" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments, the ensemble spreads are
increased in all of the variables for the larger relaxation parameters
(Figs. 3c, 4c, d). It appears that the larger relaxation parameters maintain
the large ensemble spread induced by the perturbed boundary conditions. In
the RTPP<inline-formula><mml:math id="M194" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments, the accuracy of SSH and SSHA is the highest for
<inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>, although there is no significant improvement relative
to the NO INFL experiment (Fig. 3a, b). The accuracy in both zonal and
meridional velocity improves with larger relaxation parameter, and
significantly improves for <inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>–1.0  (Fig. 4a, b).
Consequently, <inline-formula><mml:math id="M197" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>–0.9 in the RTPP<inline-formula><mml:math id="M198" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment may be
appropriate to represent the flow field more accurately.</p>
      <p id="d1e4070">In the RTPS<inline-formula><mml:math id="M199" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment, the accuracy of the SSH, SSHA, and horizontal
velocity tends to improve as the relaxation parameter increases, and then
significant degradation suddenly occurs for <inline-formula><mml:math id="M200" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.2</mml:mn></mml:mrow></mml:math></inline-formula> (Figs. 3a,
b; 4a, b). For <inline-formula><mml:math id="M201" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.1</mml:mn></mml:mrow></mml:math></inline-formula>, the RTPS<inline-formula><mml:math id="M202" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment has the best
accuracy for the SSH and SSHA but significant improvement only in the SSHA
(Fig. 3a, b). For <inline-formula><mml:math id="M203" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn></mml:mrow></mml:math></inline-formula>, the accuracy in both zonal and
meridional velocity is significantly higher (Fig. 4a, b). Therefore, <inline-formula><mml:math id="M204" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn></mml:mrow></mml:math></inline-formula>–1.1 seems to be the best among the RTPS<inline-formula><mml:math id="M205" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments. We
note that the accuracy of the SSH and SSHA in the RTPP<inline-formula><mml:math id="M206" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and RTPS<inline-formula><mml:math id="M207" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU
experiments does not surpass the RTPP09 and RTPS09 experiments, probably
because the IAU method does not use the SSH analyses. Furthermore, the
comparison between the RTPP<inline-formula><mml:math id="M208" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and RTPS<inline-formula><mml:math id="M209" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments suggests that
the combination of the IAU and RTPP has higher skill in reproducing the flow
field.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><?xmltex \currentcnt{4}?><?xmltex \def\figurename{Figure}?><label>Figure 4</label><caption><p id="d1e4185">As in Fig. 1 but for the analysis RMSDs of the surface <bold>(a)</bold> zonal
and <bold>(b)</bold> meridional velocity relative to the drifter buoys as well as the ensemble
spreads of the surface <bold>(c)</bold> zonal and <bold>(d)</bold> meridional velocity. The RMSDs of
surface zonal and meridional velocity in the RTPS12<inline-formula><mml:math id="M210" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment are
0.293 and 0.277 m s<inline-formula><mml:math id="M211" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively (not shown). The RMSD in panel <bold>(b)</bold> and
ensemble spreads in panels <bold>(c)</bold> and <bold>(d)</bold> in the RTPP09 experiment are slightly offset
for visualization.</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022-f04.png"/>

          </fig>

      <p id="d1e4235">To examine the spatial features of the analysis accuracy and ensemble spread,
the analysis RMSDs and ensemble spreads in the SSHA are also averaged over
2016 (Figs. 5 and 6, respectively). In most experiments, large RMSDs and
ensemble spreads are distributed around the KE region, where there are
abundant fronts and eddies. Compared with the NO INFL experiment, the
ensemble spreads become smaller in the midlatitude region in the NO
INFL<inline-formula><mml:math id="M212" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment; thus, the accuracy around the KE region is
degraded. The RTPP09, RTPS09, RTPP09<inline-formula><mml:math id="M213" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU, and RTPS11<inline-formula><mml:math id="M214" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments
show larger ensemble spreads, leading to improvement of the accuracy around
the KE region. However, the larger ensemble spread is also seen in the
subtropical region in the RTPS11<inline-formula><mml:math id="M215" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment. This does not seem
reasonable because a free ensemble experiment does not demonstrate such
spread even if the perturbed atmospheric and lateral boundary conditions are
applied (not shown).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><?xmltex \currentcnt{5}?><?xmltex \def\figurename{Figure}?><label>Figure 5</label><caption><p id="d1e4268">As in Fig. 3 but for the analysis RMSDs relative to the SSHA from
the AVISO dataset (color). The black star in panel <bold>(a)</bold> indicates the KEO buoy location
(32.3<inline-formula><mml:math id="M216" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 144.6<inline-formula><mml:math id="M217" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E).</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022-f05.png"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><?xmltex \currentcnt{6}?><?xmltex \def\figurename{Figure}?><label>Figure 6</label><caption><p id="d1e4301">As in Fig. 3 but for the SSHA ensemble spreads.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022-f06.png"/>

          </fig>

      <p id="d1e4310">To investigate the forecast accuracy, we calculate the spatiotemporally
averaged forecast RMSDs of the 11 d ensemble forecast experiments for each
month in 2016 (i.e., a total of 12 cases) relative to the AVISO and drifter
buoys, and the 12 cases are averaged to obtain the forecast RMSDs over 2016
(Fig. 7). As shown in Figs. 3, 4, and 7, the results of the forecast RMSDs
generally agree with those of the analysis RMSDs, except for the
RTPP09<inline-formula><mml:math id="M218" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and RTPS09<inline-formula><mml:math id="M219" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments showing smaller forecast SSHA
RMSDs than the NO INFL experiment. Overall, the combination of the IAU and
RTPP09 seems to be the most suitable for not only constructing analysis
products but also conducting ensemble forecasts.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><?xmltex \currentcnt{7}?><?xmltex \def\figurename{Figure}?><label>Figure 7</label><caption><p id="d1e4329">Spatiotemporally averaged RMSDs of the 11 d ensemble forecast in the NO
INFL (black), RTPP09 (red), RTPS09 (blue), NO INFL<inline-formula><mml:math id="M220" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU (gray),
RTPP09<inline-formula><mml:math id="M221" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU (orange), and RTPS09<inline-formula><mml:math id="M222" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU (cyan) experiments relative to
<bold>(a)</bold> SSH and <bold>(b)</bold> SSHA from the AVISO dataset and surface <bold>(c)</bold> zonal and <bold>(d)</bold> meridional
velocities from the drifter buoys. The RMSDs in the RTPS09 in panels <bold>(b)</bold>, <bold>(c)</bold>, and <bold>(d)</bold> are slightly offset for visualization.</p></caption>
            <?xmltex \igopts{width=199.169291pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022-f07.png"/>

          </fig>

</sec>
<sec id="Ch1.S4.SS2.SSS2">
  <label>4.2.2</label><title>The KEO buoy</title>
      <p id="d1e4389">We also calculate the analysis and forecast RMSDs relative to independent
observations of temperature, salinity, and horizontal velocity from the KEO
buoy located south of the KE (Fig. 5a). Here, only the temperature and
salinity results are shown because there is basically no improvement in the
horizontal velocity. There is almost no difference between the NO INFL<inline-formula><mml:math id="M223" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU
and NO INFL experiments in the temperature analysis accuracy, whereas the
salinity analysis accuracy is significantly degraded around 0–200 m depth
in the NO INFL<inline-formula><mml:math id="M224" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment (Fig. 8). Therefore, the IAU may reduce the
analysis accuracy, although this is not as obvious as for the flow field
shown in Sect. 4.2.1. The RTPP and RTPS experiments give significantly
better analysis accuracy than the NO INFL experiment for both temperature and
salinity; thus, the RTPP and RTPS play a role in enhancing the analysis
accuracy. These results are qualitatively the same as the forecast accuracy
(Fig. 9).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8"><?xmltex \currentcnt{8}?><?xmltex \def\figurename{Figure}?><label>Figure 8</label><caption><p id="d1e4408">Analysis RMSDs of <bold>(a)</bold> temperature and <bold>(b)</bold> salinity relative to the
KEO buoy averaged over 2016 in the NO INFL (black star), RTPP09 (red),
RTPS09 (blue), NO INFL<inline-formula><mml:math id="M225" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU (gray), RTPP09<inline-formula><mml:math id="M226" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU (orange), and RTPS11<inline-formula><mml:math id="M227" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU
(cyan) experiments. Open circles and triangles denote significant
improvement and degradation relative to the NO INFL experiment at a 99 %
confidence level, respectively. Closed circles and triangles indicate
improvement and degradation with no significant differences, respectively.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022-f08.png"/>

          </fig>

      <p id="d1e4444">When the relaxation parameter <inline-formula><mml:math id="M228" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is 0.7–1.0 in the RTPP<inline-formula><mml:math id="M229" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU
experiment, the temperature analysis accuracy is significantly enhanced
around 200–500 m depth, although there is slight degradation around
50–150 m depth (Fig. 10a). For the parameter values in that range, the
salinity analysis accuracy is also significantly improved at almost all
depths (Fig. 10c). As the temperature analysis accuracy is the best at
<inline-formula><mml:math id="M230" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>–0.9 and the salinity analysis accuracy improves as the
relaxation parameter increases, the appropriate relaxation parameter would
be <inline-formula><mml:math id="M231" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>–0.9 in the RTPP<inline-formula><mml:math id="M232" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9"><?xmltex \currentcnt{9}?><?xmltex \def\figurename{Figure}?><label>Figure 9</label><caption><p id="d1e4505">As in Fig. 8 but for the forecast RMSDs of the 11 d ensemble
forecast experiments. We note that the results of the RTPS09<inline-formula><mml:math id="M233" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU
experiment are shown here, whereas the analysis RMSDs of the RTPS11<inline-formula><mml:math id="M234" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU
experiment are shown in Fig. 8; thus, the relaxation parameters are
different in the RTPS<inline-formula><mml:math id="M235" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022-f09.png"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10"><?xmltex \currentcnt{10}?><?xmltex \def\figurename{Figure}?><label>Figure 10</label><caption><p id="d1e4537">Temperature analysis RMSDs (black contours) and IRs (color
shading and white contours) between the KEO buoy and the <bold>(a)</bold> RTPP<inline-formula><mml:math id="M236" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and <bold>(b)</bold> RTPS<inline-formula><mml:math id="M237" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments averaged over 2016. Panels <bold>(c)</bold> and <bold>(d)</bold> are the same as panels <bold>(a)</bold> and <bold>(b)</bold> but
for salinity. Open circles and triangles indicate significant improvement
and degradation relative to the NO INFL experiment at a 99 % confidence
level, respectively. Thin (thick) black contour intervals are 0.2 (1.0) <inline-formula><mml:math id="M238" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C in panels <bold>(a)</bold> and <bold>(b)</bold>, whereas they are 0.1 (0.2) in panels <bold>(c)</bold> and <bold>(d)</bold>; thin (thick)
white contour intervals are 10 % (100 %).</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022-f10.png"/>

          </fig>

      <p id="d1e4601">In the RTPS<inline-formula><mml:math id="M239" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments, the temperature analysis accuracy below 200 m
depth is significantly improved for <inline-formula><mml:math id="M240" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>–1.1, whereas that
above 200 m depth is significantly degraded for <inline-formula><mml:math id="M241" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula>–0.8 and
<inline-formula><mml:math id="M242" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.2</mml:mn></mml:mrow></mml:math></inline-formula> (Fig. 10b). The salinity analysis accuracy improves
over almost the whole depth when the relaxation parameter is <inline-formula><mml:math id="M243" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn></mml:mrow></mml:math></inline-formula>–1.2, whereas there is significant degradation around 0–200 m
depth when the relaxation parameter is <inline-formula><mml:math id="M244" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula>–0.9 (Fig. 10d).
Therefore, a suitable relaxation parameter is <inline-formula><mml:math id="M245" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn></mml:mrow></mml:math></inline-formula>–1.1 in
the RTPS<inline-formula><mml:math id="M246" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment.</p>
      <p id="d1e4709">The RTPP09<inline-formula><mml:math id="M247" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and RTPS11<inline-formula><mml:math id="M248" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments have higher analysis accuracy
(Fig. 8), and the RTPP09 and RTPP09<inline-formula><mml:math id="M249" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments show higher forecast
accuracy (Fig. 9) than the other experiments. Therefore, the combination of
the IAU and RTPP09 is the most appropriate for the analysis and ensemble
forecasts.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><?xmltex \currentcnt{4}?><label>Table 4</label><caption><p id="d1e4736">Schematic summarizing the evaluation of the geostrophic balance and
analysis accuracy of the AVISO SSH and SSHA, the surface zonal and
meridional velocity from the drifter buoys, and the temperature and salinity
at the KEO buoy in the sensitivity experiments. Open circles and crosses
indicate improvement and degradation relative to the NO INFL experiment, respectively, and asterisks denote significant improvement and degradation.
In rows two to four, symbols and asterisks are used only if both variables
have the same results; otherwise, dashes are used to indicate no significant
difference from the NO INFL experiment. Parentheses in the RTPP<inline-formula><mml:math id="M250" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU and
RTPS<inline-formula><mml:math id="M251" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiments denote the best relaxation parameter in the second
row and the range of the relaxation parameter with significant improvement
in the other rows.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">IAU</oasis:entry>
         <oasis:entry colname="col3">RTPP09</oasis:entry>
         <oasis:entry colname="col4">RTPS09</oasis:entry>
         <oasis:entry colname="col5">RTPP<inline-formula><mml:math id="M252" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU</oasis:entry>
         <oasis:entry colname="col6">RTPS<inline-formula><mml:math id="M253" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Geostrophic balance</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M254" display="inline"><mml:mrow><mml:msup><mml:mo>∘</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M255" display="inline"><mml:mrow><mml:msup><mml:mo>×</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M256" display="inline"><mml:mrow><mml:msup><mml:mo>×</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M257" display="inline"><mml:mrow><mml:msup><mml:mo>∘</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M258" display="inline"><mml:mrow><mml:msup><mml:mo>∘</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">(Sig. at <inline-formula><mml:math id="M259" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">0.9</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">(Sig. at <inline-formula><mml:math id="M260" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SSH and SSHA</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M261" display="inline"><mml:mrow><mml:msup><mml:mo>×</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M262" display="inline"><mml:mrow><mml:msup><mml:mo>∘</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M263" display="inline"><mml:mrow><mml:msup><mml:mo>∘</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">from the AVISO</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">(Best at <inline-formula><mml:math id="M264" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">(Best at <inline-formula><mml:math id="M265" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.1</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Surface velocity</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M266" display="inline"><mml:mrow><mml:msup><mml:mo>×</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M267" display="inline"><mml:mo>∘</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M268" display="inline"><mml:mrow><mml:msup><mml:mo>∘</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M269" display="inline"><mml:mrow><mml:msup><mml:mo>∘</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M270" display="inline"><mml:mrow><mml:msup><mml:mo>∘</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">from the drifter buoys</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">(Sig. at <inline-formula><mml:math id="M271" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>–1.0)</oasis:entry>
         <oasis:entry colname="col6">(Sig. at <inline-formula><mml:math id="M272" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M273" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M274" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M275" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M276" display="inline"><mml:mrow><mml:msup><mml:mo>∘</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M277" display="inline"><mml:mrow><mml:msup><mml:mo>∘</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M278" display="inline"><mml:mrow><mml:msup><mml:mo>∘</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M279" display="inline"><mml:mrow><mml:msup><mml:mo>∘</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">at the KEO buoy</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">(Sig. at <inline-formula><mml:math id="M280" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.7</mml:mn></mml:mrow></mml:math></inline-formula>–1.0)</oasis:entry>
         <oasis:entry colname="col6">(Sig. at <inline-formula><mml:math id="M281" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn></mml:mrow></mml:math></inline-formula>–1.1)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
</sec>
</sec>
<sec id="Ch1.S5">
  <label>5</label><?xmltex \opttitle{Comparison of the prescribed MULT parameter with the
RTPP09$+$IAU experiment }?><title>Comparison of the prescribed MULT parameter with the
RTPP09<inline-formula><mml:math id="M282" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment </title>
      <p id="d1e5286">To investigate how much the inflation in the RTPP09<inline-formula><mml:math id="M283" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment
corresponds to the MULT parameter, we estimate the MULT parameter <inline-formula><mml:math id="M284" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">est</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> corresponding to the RTPP09<inline-formula><mml:math id="M285" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment using the following
equation:
          <disp-formula id="Ch1.E11" content-type="numbered"><label>11</label><mml:math id="M286" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msup><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:msubsup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">orig</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msubsup><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">est</mml:mi></mml:msub></mml:mrow></mml:msqrt><mml:msup><mml:mi mathvariant="bold">X</mml:mi><mml:mi>f</mml:mi></mml:msup><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
        By multiplying
<inline-formula><mml:math id="M287" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msup><mml:msup><mml:mo>)</mml:mo><mml:mi>T</mml:mi></mml:msup><mml:msup><mml:mfenced close="]" open="["><mml:mrow><mml:msup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msup><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msup><mml:msup><mml:mo>)</mml:mo><mml:mi>T</mml:mi></mml:msup></mml:mrow></mml:mfenced><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> from the right-hand side of Eq. (11),
          <disp-formula id="Ch1.E12" content-type="numbered"><label>12</label><mml:math id="M288" display="block"><mml:mrow><?xmltex \hack{\hbox\bgroup\fontsize{8.5}{8.5}\selectfont$\displaystyle}?><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">est</mml:mi></mml:msub><mml:mi mathvariant="bold">I</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mfenced close="}" open="{"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mi>I</mml:mi><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:msubsup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">orig</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msubsup><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msup><mml:msup><mml:mo>)</mml:mo><mml:mi>T</mml:mi></mml:msup><mml:msup><mml:mfenced close="]" open="["><mml:mrow><mml:msup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msup><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold">X</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msup><mml:msup><mml:mo>)</mml:mo><mml:mi>T</mml:mi></mml:msup></mml:mrow></mml:mfenced><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo><?xmltex \hack{$\egroup}?></mml:mrow></mml:math></disp-formula>
        where <inline-formula><mml:math id="M289" display="inline"><mml:mi mathvariant="bold">I</mml:mi></mml:math></inline-formula> denotes the identity matrix. In scalar format, the estimated
parameter <inline-formula><mml:math id="M290" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">est</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula> at the <inline-formula><mml:math id="M291" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>th variable might be represented as
          <disp-formula id="Ch1.E13" content-type="numbered"><label>13</label><mml:math id="M292" display="block"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">est</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup><mml:mo>=</mml:mo><mml:msup><mml:mfenced open="{" close="}"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>X</mml:mi><mml:mi mathvariant="normal">orig</mml:mi><mml:mrow><mml:mi mathvariant="normal">a</mml:mi><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup><mml:mo>(</mml:mo><mml:msup><mml:mi>X</mml:mi><mml:mrow><mml:mi mathvariant="normal">f</mml:mi><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:msup><mml:mo>)</mml:mo><mml:mi>T</mml:mi></mml:msup></mml:mrow><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mrow><mml:mi>f</mml:mi><mml:mfenced open="(" close=")"><mml:mi>i</mml:mi></mml:mfenced></mml:mrow></mml:msup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
        Using the outputs from the RTPP09<inline-formula><mml:math id="M293" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment, we calculate the
estimated MULT parameter for the SST, SSS, and SSH fields (Fig. 11). The
estimated MULT parameter is large around the midlatitude region, especially
around the KE region. The estimated MULT parameters averaged
over the whole domain and analysis period are 1.08 (1.11) for the SST and
SSS (SSH) fields, and these values correspond well to the prescribed MULT
parameter <inline-formula><mml:math id="M294" display="inline"><mml:mrow><mml:mi mathvariant="italic">ρ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">1.05</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">1.10</mml:mn></mml:mrow></mml:math></inline-formula>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11"><?xmltex \currentcnt{11}?><?xmltex \def\figurename{Figure}?><label>Figure 11</label><caption><p id="d1e5665">Estimated MULT parameters (Eq. 11) averaged over 2016 for <bold>(a)</bold> SST, <bold>(b)</bold> SSS, and <bold>(c)</bold> SSH fields using the outputs from the RTPP09<inline-formula><mml:math id="M295" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU
experiment. Right bottom values indicate spatiotemporally averaged estimated
MULT parameters. Thin (Thick) counter intervals are 0.02 (0.1).</p></caption>
        <?xmltex \igopts{width=156.490157pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/8395/2022/gmd-15-8395-2022-f11.png"/>

      </fig>

      <p id="d1e5690">As shown in Fig. 11, the MULT parameter might have spatial dependency;
therefore, adaptive MULT (Miyoshi, 2011) may be
useful. However, Ohishi et al. (2022) demonstrated that adaptive
observation error inflation (AOEI;
Minamide and Zhang, 2017; Zhang et al., 2016), with opposite effects to the
adaptive MULT, significantly improves the dynamical balance and accuracy of
the temperature, salinity, and surface horizontal velocities. This is
because the AOEI suppresses the erroneous temperature and salinity analysis
increments associated with the representation errors around the KE region, which result in strong vertical salinity diffusion through
weakening density stratification and therefore degrade the low-salinity
structure in the intermediate layer. This implies that the adaptive MULT
would increase the analysis increments and degrade the dynamical balance and
accuracy. Therefore, it is difficult to find an appropriate MULT parameter.</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S6" sec-type="conclusions">
  <label>6</label><title>Summary</title>
      <p id="d1e5702">In this study, we have developed an EnKF-based ocean data assimilation
system with an assimilation interval of 1 d to take advantage of frequent
satellite observations; moreover, we have conducted sensitivity experiments to
explore the best combination of the IAU and covariance inflation methods by
evaluating the geostrophic balance and analysis accuracy. Table 4 summarizes
the overall evaluation in this study. The IAU and RTPP/RTPS have opposite
effects to each other; namely, the IAU improves the balance but degrades the
accuracy, reducing the ensemble spread, whereas the RTPP and RTPS degrade
the balance and improve the accuracy by inflating the ensemble spread. Large
RTPP and RTPS parameters maintain large ensemble spread inflated by the
perturbed boundary conditions, and the resulting large analysis increments
degrade the balance but improve the accuracy. The RTPP<inline-formula><mml:math id="M296" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment
provides significantly better balance for relaxation parameters of
<inline-formula><mml:math id="M297" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">0.9</mml:mn></mml:mrow></mml:math></inline-formula> as well as better accuracy when the relaxation
parameter is <inline-formula><mml:math id="M298" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>–1.0. Therefore, this study demonstrates
that the appropriate parameter is <inline-formula><mml:math id="M299" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>–0.9 when the IAU and
RTPP are combined. In contrast, the RTPS<inline-formula><mml:math id="M300" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment does not
significantly improve the balance and accuracy at the same time, as the
balance is significantly better for a relaxation parameter of <inline-formula><mml:math id="M301" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>, whereas the accuracy is significantly higher when the
relaxation parameter is <inline-formula><mml:math id="M302" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn></mml:mrow></mml:math></inline-formula>–1.1. Therefore, this study
demonstrates that the combination of the IAU and RTPP with a relaxation
parameter of <inline-formula><mml:math id="M303" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>–0.9 is the most suitable for the
EnKF-based ocean data assimilation system. The 11 d ensemble forecast
experiments show consistent results of forecast accuracy with the analysis
accuracy.</p>
      <p id="d1e5810">In the combination of the IAU and RTPP, the large relaxation parameter of
<inline-formula><mml:math id="M304" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">RTPP</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>–0.9 maintains the ensemble spread induced by perturbed
boundary conditions and leads to the improvement of the analysis accuracy
but the degradation of the dynamical balance; concurrently, the IAU
improves the degradation of the dynamical balance by the RTPP. As a result,
this would lead to further improvement of the forecast and analysis accuracy
by reducing the initial shocks in frequent data assimilation. Compared with
the RTPS (RTPS<inline-formula><mml:math id="M305" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU) experiments, the RTPP (RTPP<inline-formula><mml:math id="M306" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU) experiments show
better balance and result in smaller initial shocks. As a result, the
combination of the IAU and RTPP leads to better accuracy than that of the IAU
and RTPS.</p>
      <p id="d1e5842">The MULT with a 5 % inflation of the forecast ensemble spread does not
have sufficient skill in maintaining the balance and accurately reproducing
the flow field, regardless of whether or not the IAU is applied. Although it
is difficult to find an appropriate MULT parameter, as described in Sect. 5, it might be possible that MULT produces analyses with good balance and
accuracy by tuning the inflation parameter. However, as the computational
cost of tuning the parameters in all covariance inflation methods is high,
this study focuses on the combination of the RTPP/RTPS and IAU with good
balance and accuracy. This system still contains other tuning parameters in
the perturbed atmospheric forcing, ensemble size, localization scale, and
observation errors. We note that the suitable RTPP parameter in the
RTPP<inline-formula><mml:math id="M307" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>IAU experiment would be different depending on those parameter
settings. Further experiments are required to determine the best settings
for a given computational resource, and we will address this issue in future
studies.</p>
      <p id="d1e5852">The results of this study would also be useful for constructing EnKF-based
data assimilation systems in other fields in which gravity waves have
substantial impacts. Furthermore, this study may help improve the accuracy
of existing EnKF-based data assimilation systems. Table 1 shows that there
are no eddy-resolving EnKF-based ocean reanalysis datasets in the Pacific
region. We are now planning to construct such analysis datasets and
real-time ensemble prediction systems.</p>
</sec>

      
      </body>
    <back><notes notes-type="codedataavailability"><title>Code and data availability</title>

      <p id="d1e5859">The source codes for sbPOM and LETKF are available from <ext-link xlink:href="https://doi.org/10.5281/zenodo.6482744" ext-link-type="DOI">10.5281/zenodo.6482744</ext-link> (Ohishi, 2022)  and
<uri>https://github.com/takemasa-miyoshi/letkf</uri>
(last access: 13 April 2021,
Miyoshi and Yamane, 2007), respectively. The COARE, version 3.5, source code
is available from <uri>https://github.com/brodeau/aerobulk</uri>
(last
access: 13 April 2021, Brodeau et al., 2017; Edson et al., 2013).</p>

      <p id="d1e5871">We thank Kenshi Hibino for providing us with an earlier version of the
TE-Global before the official release of the latest version (<uri>https://www.eorc.jaxa.jp/water/</uri>, last access: 13 April 2021). Details of the observational datasets are as follows: the surface drifter buoy data are available from
<uri>https://www.aoml.noaa.gov/phod/gdp/hourly_data.php</uri> (last access: 13 April 2021,
Elipot et al., 2016); the KEO buoy data are available from <uri>https://www.pmel.noaa.gov/ocs/</uri> (last access: 13 April 2021); the ETOPO1 dataset is available from
from <uri>https://www.ngdc.noaa.gov/mgg/global/</uri>
(last access: 13 April 2021, Amante and Eakins, 2009); the
WOA18 dataset is available from <uri>https://www.ncei.noaa.gov/access/world-ocean-atlas-2018/</uri>
(last
access: 13 April 2021; Locarnini et al., 2019; Zweng et al., 2019); the
Himawari-8 satellite SST data are available from <uri>https://www.eorc.jaxa.jp/ptree/index.html</uri>
(last access: 13 April 2021; Bessho et
al., 2016; Kurihara et al., 2016); the GCOM-W SST data are available from <uri>https://gportal.jaxa.jp/gpr/?lang=en</uri> (last access: 13 April 2021); the satellite SSS data from SMOS are available from <uri>http://www.esa.int/Applications/Observing_the_Earth/SMOS</uri> (last access: 13 April 2021); SMAP version 4.3 can be accessed at
<uri>https://podaac.jpl.nasa.gov/</uri>
(last access: 13 April 2021, Meissner et
al., 2018); the satellite SSHA data and AVISO datasets (Ducet et al.,
2000) are available from CMEMS (<uri>https://marine.copernicus.eu/</uri>, last
access: 13 April 2021); in situ temperature and salinity data are available from GTSPP
(<uri>https://www.ncei.noaa.gov/products/global-temperature-and-salinity-profile-programme</uri>,
last access: 13 April 2021, Sun et al., 2010); and AQC Argo, version 1.2a, can be accessed at
<uri>https://www.jamstec.go.jp/argo_research/dataset/aqc/index_dataset.html</uri> (last access: 13 April 2021). The global JRA-55 atmosphere and SODA 3.7.2 ocean reanalysis
datasets are from <uri>http://search.diasjp.net/en/dataset/JRA55</uri>
(last access: 13 April 2021, Kobayashi
et al., 2015) and <uri>https://www.soda.umd.edu/soda3_readme.htm</uri> (last access: 13 April 2021, Carton et al., 2018), respectively.</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e5921">SO, TH, and YM developed the code of the ocean data assimilation system. SO
conducted the sensitivity experiments and analyzed their outputs. SO and TM
prepared the paper with contributions from all coauthors (TH, HA, JI, YM,
and MK).</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e5927">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d1e5933">Publisher’s note: Copernicus Publications remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e5939">We thank Yue Ying and two anonymous reviewers for their constructive
comments. We are very grateful to Shunji Kotsuki at Chiba University for
providing us with sample code of the RTPP and RTPS. Numerous comments from
Nariaki Hirose, Takahiro Toyoda, Yosuke Fujii, and Norihisa Usui (at the
Meteorological Research Institute); Yoichi Ishikawa (at JAMSTEC); Katsumi Takayama (at IDEA Consultants, Inc.); Naoki Hirose (at Kyushu University); and
participants in the ocean data assimilation summer school also helped us
develop the system. This work used computational resources of the JAXA
Supercomputer System Generation 2 and 3 (JSS2 and JSS3, respectively) and
the Fugaku supercomputer provided by RIKEN through the HPCI System Research Project
(project ID: hp210166, hp220167, ra000007).</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e5944">This work was supported by JST AIP (grant no. JPMJCR19U2), Japan; MEXT
(grant no. JPMXP1020200305) within the framework of the “Program for Promoting Research on the Supercomputer
Fugaku” (Large Ensemble Atmospheric and Environmental Prediction for
Disaster Prevention and Mitigation); the COE research grant in computational
science from Hyogo Prefecture and Kobe City through the Foundation for
Computational Science; JST, SICORP (grant no. JPMJSC1804), Japan; JSPS
KAKENHI (grant no. JP19H05605); the Japan Aerospace Exploration Agency
(grant nos. JX-PSPC-452680, JX-PSPC-500973, JX-PSPC-509736, JX-PSPC-513414, JX-PSPC-519799, and JX-PSPC-527843); JST,
CREST (grant no. JPMJCR20F2), Japan; Cabinet Office, Government of Japan,
Moonshot R&amp;D Program for Agriculture, Forestry and Fisheries (funding
agency: Bio-oriented Technology Research Advancement Institution;
grant no. JPJ009237); the RIKEN Pioneering Project “Prediction for Science”; and JST CREST
(grant no. JPMJSA2109).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e5950">This paper was edited by Yuefei Zeng and reviewed by Yue Ying and two anonymous referees.</p>
  </notes><ref-list>
    <title>References</title>

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