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<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0" article-type="research-article">
  <front>
    <journal-meta><journal-id journal-id-type="publisher">GMD</journal-id><journal-title-group>
    <journal-title>Geoscientific Model Development</journal-title>
    <abbrev-journal-title abbrev-type="publisher">GMD</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Geosci. Model Dev.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1991-9603</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/gmd-15-3901-2022</article-id><title-group><article-title>ECOSMO II(CHL): a marine biogeochemical <?xmltex \hack{\break}?> model for the North Atlantic and the Arctic</article-title><alt-title>ECOSMO II(CHL): a marine biogeochemical model for the North Atlantic</alt-title>
      </title-group><?xmltex \runningtitle{ECOSMO~II(CHL): a marine biogeochemical model for the North Atlantic}?><?xmltex \runningauthor{V.~\c{C}.~Yumruktepe et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Yumruktepe</surname><given-names>Veli Çağlar</given-names></name>
          <email>caglar.yumruktepe@nersc.no</email>
        <ext-link>https://orcid.org/0000-0002-9296-7790</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Samuelsen</surname><given-names>Annette</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9736-6484</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Daewel</surname><given-names>Ute</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Nansen Environmental and Remote Sensing Center, Jahnebakken 3, 5007, Bergen, Norway</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Helmholtz-Zentrum Hereon, Institute for Coastal Systems – Analysis
and Modelling, <?xmltex \hack{\break}?> Max-Planck-Str. 1, Geesthacht, Germany</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Veli Çağlar Yumruktepe (caglar.yumruktepe@nersc.no)</corresp></author-notes><pub-date><day>13</day><month>May</month><year>2022</year></pub-date>
      
      <volume>15</volume>
      <issue>9</issue>
      <fpage>3901</fpage><lpage>3921</lpage>
      <history>
        <date date-type="received"><day>6</day><month>August</month><year>2021</year></date>
           <date date-type="rev-request"><day>11</day><month>November</month><year>2021</year></date>
           <date date-type="rev-recd"><day>27</day><month>March</month><year>2022</year></date>
           <date date-type="accepted"><day>8</day><month>April</month><year>2022</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2022 Veli Çağlar Yumruktepe et al.</copyright-statement>
        <copyright-year>2022</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022.html">This article is available from https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022.html</self-uri><self-uri xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022.pdf">The full text article is available as a PDF file from https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d1e109">ECOSMO II is a fully coupled bio-physical model of 3D hydrodynamics with an intermediate-complexity NPZD (nutrient, phytoplankton, zooplankton, detritus) type biology including sediment-water column exchange processes originally formulated for the North Sea and Baltic Sea. Here we present an updated version of the model incorporating chlorophyll <inline-formula><mml:math id="M1" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> as a prognostic state variable: ECOSMO II(CHL). The version presented here is online coupled to the HYCOM ocean model. The model is intended to be used for regional configurations for the North Atlantic and the Arctic incorporating coarse to high spatial resolutions for hind-casting and operational purposes. We provide the full descriptions of the changes in ECOSMO II(CHL) from ECOSMO II and provide the evaluation for the inorganic nutrients and chlorophyll <inline-formula><mml:math id="M2" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> variables, present the modelled biogeochemistry of the Nordic Seas and the Arctic, and experiment on various parameterization sets as use cases targeting chlorophyll <inline-formula><mml:math id="M3" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> dynamics. We document the performance of each parameter set objectively analysing the experiments against in situ, satellite and climatology data. The model evaluations for
each experiment demonstrated that the simulations are consistent with the
large-scale climatological nutrient setting and are capable of representing
regional and seasonal changes. Explicitly resolving chlorophyll <inline-formula><mml:math id="M4" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> allows for more dynamic seasonal and vertical variations in phytoplankton biomass to chlorophyll <inline-formula><mml:math id="M5" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> ratio and improves model chlorophyll <inline-formula><mml:math id="M6" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> performance near the surface. Through experimenting with the model performance, we document the general biogeochemisty of the Nordic Seas and the Arctic. The Norwegian and Barents seas primary production show distinct seasonal patterns with a
pronounced spring bloom dominated by diatoms and low biomass during winter
months. The Norwegian Sea annual primary production is around double that of
the Barents Sea while also having an earlier spring bloom.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e164">Operational ocean forecasting and reanalysis systems that integrate in situ
measurements, remote sensing observations, modelling and data assimilation
are fundamental tools for understanding the variability and dynamics of the
physical and biogeochemical ocean state. Such systems are also essential for
a better and more sustainable management of the oceans and marine ecosystems, supporting the development and understanding of human activities and the blue economy (von Schuckmann et al., 2016). In this context, the presentation of the underlying science, continuous evaluation and development of the forecast systems are required to provide the best possible forecast and reanalysis.</p>
      <p id="d1e167">The presented model version, ECOSMO II(CHL), is adapted from the biogeochemical model ECOSMO (Schrum et al., 2006), later ECOSMO II (Daewel and Schrum, 2013; DS2013), and is currently used as the marine biogeochemical model for operational forecasts (<uri>https://doi.org/10.48670/moi-00003</uri>) of the Arctic Ocean (ARC MFC – Arctic Marine Forecasting Centre) under the umbrella of CMEMS (The European Copernicus Marine Environment Monitoring Service; <uri>https://marine.copernicus.eu/</uri>, last access: 11 May 2022). The biogeochemical forecast ECOSMO II(CHL) has been operational since April 2017, and the daily values of the selected variables can be retrieved from the CMEMS database. While based on the ECOSMO II version presented in DS2013, the transfer of the model to a different circulation model, region and model resolution necessitated an adjustment of model parameterizations and additional functionalities, which in turn required a series of new sensitivity tests.</p>
      <p id="d1e176">ECOSMO II is an intermediate-complexity nutrient–phytoplankton–zooplankton–detritus (NPZD) type model describing the trophic interactions between three phytoplankton and two zooplankton components. It was shown to successfully simulate the seasonal and inter-annual ecosystem variability of primary and secondary production in
the North and Baltic seas (Daewel and Schrum, 2013). In the framework of the
ARC MFC forecasting system which covers the northern part of the Atlantic
Ocean and the Arctic, its application and scientific scope was shifted to be
used for the open-ocean and sea-ice-covered domains. Furthermore, when moving from one circulation model to another, biogeochemical models will behave differently as a result of differences in the physical model (Skogen and Moll, 2005). Both these changes require adjustments to the model formulation and parameters to give good results in the focus regions. ECOSMO II(CHL) most notably introduces chlorophyll <inline-formula><mml:math id="M7" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> as a prognostic variable. Allowing a flexible chlorophyll-to-carbon ratio is more realistic and has been shown to be more stable when chlorophyll is assimilated (Ciavatta et al., 2011). This addition allows the direct assimilation of ocean colour observations into the forecasting and reanalysis systems. The description of the model changes, added components, and the evaluation of the ECOSMO II(CHL) results within the North Atlantic and Arctic form the main content of this paper.</p>
      <p id="d1e186">The North Atlantic above 60<inline-formula><mml:math id="M8" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, the focus in this paper, is a typical spring-bloom system (Longhurst, 1998; Rey, 2004). During winter, strong winds and cooling mix the water column several hundred metres and brings up nutrient-rich waters (Nilsen and Falck, 2006). Once the water
column stratifies enough for the bloom to start, the diatoms dominate the
system. When silicate is depleted, the smaller flagellates and dinoflagellates dominate the phytoplankton community (Rey, 2004). Sporadically there are also extensive coccolithophore blooms covering large
areas (Baumann et al., 2000). The main species of mesozooplankton in this
area, <italic>Calanus finmarchicus</italic>, overwinters at depth (Melle et al., 2004) and ascend to the surface at the onset of spring; therefore there is already some zooplankton biomass present at the time of the start of the spring. There is also a fall bloom present as seen from satellite observations. The areas closer to the Arctic, being covered by sea ice, have different dynamics. In sea-ice-covered regions, small blooms can occur in leads and under thin ice but the main bloom commences as the ice retracts (Dalpadado et al., 2020; Dong et al., 2020; Polyakov et al., 2020). Here, sea ice algae will make up some of the primary production (Gradinger, 2009), and other mesozooplankton, such as <italic>Calanus glacialis</italic>, specialized to the sea ice environment (Melle and Skjoldal, 1998), are also important. Close to sea ice and in coastal regions, early stratification can occur when sea or land ice melts resulting in a seasonal halocline. Water masses in the eastern part of the basin are relatively warm, saline water characterizing the North Atlantic Current (Orvik et al., 2001), while the western part of the basin has colder and fresher water masses of an Arctic or mixed origin (Fröb et al., 2018; Yashayaev et al., 2007).</p>
      <p id="d1e205">Our main objective with this paper is to provide the description of the latest updates in ECOSMO II(CHL) and its coupling to HYCOM. We will particularly focus on the description of the prognostic chlorophyll <inline-formula><mml:math id="M9" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
formulation. We present the results from three experiments using ECOSMO II(CHL) adopting different parameter sets from DS2013 (the original
parameter set tuned for the North and Baltic seas), CMEMS Arctic operational
model prior to June 2021 and the current Arctic operational model parameterization. We applied these three parameter sets on a model set-up with a
coarser grid than used for the operational simulations in order to allow for
2-decade-long simulations for each case. To document the performance of each
of these parameter sets for the users of ECOSMO, we present a detailed
objective analysis of the lower-trophic-level dynamics for the North Atlantic and the Arctic Ocean against local in situ observations, gridded climatology of nutrients and satellite data in Sect. 4. Following the evaluation we provide information on integrated quantities, such as annual primary production, inter-annual variability in phytoplankton production and seasonal succession of plankton functional types as a reference for the Nordic Seas and the Arctic. We will conclude by commenting on the future updates and implementations of ECOSMO II(CHL).</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>The HYCOM-ECOSMO II(CHL) model</title>
      <p id="d1e223">HYCOM-ECOSMO II(CHL) is a coupled physical–biological model (Fig. 1) where ocean physics are represented by the Hybrid Coordinate Ocean Model (HYCOM: Bleck, 2002) and the lower trophic marine biogeochemistry is resolved by ECOSMO II (Daewel and Schrum, 2013). The models are coupled online and the transport (advection and mixing) of biological state variables is handled as part of HYCOM's own native tracer-transport routines, thus both the physical and biological components use the same time stepping (20 min). The model is one-way coupled, and biology does not affect model physics. HYCOM, as a hybrid vertical coordinate model, can optionally combine the depth-level (<inline-formula><mml:math id="M10" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>-level), topography-following and density-following (isopycnal) coordinates. In this study, we set vertical levels as the combination of <inline-formula><mml:math id="M11" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> level for the upper ocean and the mixed layer and isopycnal layers below. The upper five layers are always kept in <inline-formula><mml:math id="M12" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> levels ensuring a minimum vertical resolution which is important to resolve the light gradient in the upper ocean and thus representing the vertical variation in phytoplankton growth in a realistic manner. Isopycnal layers in the deep facilitates a good conservation of water masses and tracer distributions.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Figure}?><label>Figure 1</label><caption><p id="d1e249">Schematic diagram of biochemical interactions in ECOSMO II. (DOM: dissolved organic matter; Chl- prefixes stand for phytoplankton-type-specific chlorophyll <inline-formula><mml:math id="M13" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> content; Sed. denotes sediment pool with silicate,
phosphorus and nitrate content.)</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f01.png"/>

      </fig>

      <p id="d1e265">ECOSMO II(CHL) is an intermediate-complexity lower trophic level biogeochemical model which distinguishes four inorganic nutrients (nitrate,
ammonium, phosphate and silicate) utilized by three types of phytoplankton
(diatoms, flagellates and cyanobacteria). In this study, cyanobacteria are
turned off, as they were parameterized to grow below a certain salinity
threshold which was intended to represent the cyanobacteria in the Baltic Sea (Daewel and Schrum, 2013). Our area of concern is the high latitudes,
specifically the area north of 60<inline-formula><mml:math id="M14" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N; thus the use of cyanobacteria falls short as a significant phytoplankton community for the region. Two types of zooplankton (micro- and meso-size classes) are parameterized based
on their feeding preferences as herbivorous and omnivorous zooplankton and,
as additional organic components, dissolved (DOM) and particulate (detritus)
organic matter are included in the model. The model uses the molar Redfield
ratio between <inline-formula><mml:math id="M15" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">C</mml:mi><mml:mo>:</mml:mo><mml:mi mathvariant="normal">N</mml:mi><mml:mo>:</mml:mo><mml:mi mathvariant="normal">Si</mml:mi><mml:mo>:</mml:mo><mml:mi mathvariant="normal">P</mml:mi></mml:mrow></mml:math></inline-formula> components (106 : 6.625 : 6.625 : 1), and nutrients are tracked both in the water column and in the single sediment layer.</p>
      <p id="d1e298">The full description of ECOSMO II is given in Daewel and Schrum (2013) (DS2013). In the following we provide a description of differences in the biogeochemical formulations in ECOSMO II(CHL) compared to DS2013. The most notable addition to DS2013 is the prognostic chlorophyll <inline-formula><mml:math id="M16" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> for each phytoplankton type. The biological interaction (<inline-formula><mml:math id="M17" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">chl</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) term of the introduced chlorophyll <inline-formula><mml:math id="M18" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> for <inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M20" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (diatoms and flagellates respectively) is in similar fashion to that of <inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in DS2013, and the source terms are modified by the photoacclimation factor (<inline-formula><mml:math id="M22" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">chl</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) which accounts for the variation in chlorophyll-to-biomass ratio resulting in increased chlorophyll production under low light conditions (Geider et al., 1997), hence
<?xmltex \hack{\newpage}?><?xmltex \hack{\vspace*{-6mm}}?>
          <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M23" display="block"><mml:mrow><?xmltex \hack{\hbox\bgroup\fontsize{8.9}{8.9}\selectfont$\displaystyle}?><mml:msub><mml:mi>R</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">chl</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">chl</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:msub><mml:mi>C</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:munderover><mml:msub><mml:mi>G</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:msub><mml:mi>C</mml:mi><mml:mrow><mml:msub><mml:mi>Z</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Chl</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:msub><mml:mi>m</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">Chl</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><?xmltex \hack{$\egroup}?><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where

              <disp-formula specific-use="align" content-type="numbered"><mml:math id="M24" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E2"><mml:mtd><mml:mtext>2</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">chl</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>P</mml:mi><mml:mi mathvariant="normal">max</mml:mi></mml:msubsup><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:msub><mml:mi>C</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mi>I</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mi mathvariant="normal">Chl</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E3"><mml:mtd><mml:mtext>3</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="normal">min</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>(</mml:mo><mml:mi>I</mml:mi><mml:mo>)</mml:mo><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mi>N</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mi>P</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mi mathvariant="normal">Si</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E4"><mml:mtd><mml:mtext>4</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="italic">α</mml:mi><mml:mo>(</mml:mo><mml:mi>I</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>tanh⁡</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">φ</mml:mi><mml:mi>I</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E5"><mml:mtd><mml:mtext>5</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mi>N</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E6"><mml:mtd><mml:mtext>6</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow><mml:mo>/</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow><mml:mo>+</mml:mo><mml:msub><mml:mi>r</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E7"><mml:mtd><mml:mtext>7</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow><mml:mo>/</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow><mml:mo>+</mml:mo><mml:msub><mml:mi>r</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced><mml:mi>exp⁡</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mo>-</mml:mo><mml:mi mathvariant="italic">γ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E8"><mml:mtd><mml:mtext>8</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow><mml:mo>/</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow><mml:mo>+</mml:mo><mml:msub><mml:mi>r</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E9"><mml:mtd><mml:mtext>9</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">Si</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mrow class="chem"><mml:mi mathvariant="normal">Si</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mrow class="chem"><mml:mi mathvariant="normal">Si</mml:mi></mml:mrow><mml:mo>+</mml:mo><mml:msub><mml:mi>r</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">Si</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E10"><mml:mtd><mml:mtext>10</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>G</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:msub><mml:mi>C</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>F</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E11"><mml:mtd><mml:mtext>11</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi>F</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:munderover><mml:msub><mml:mi>a</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:msub><mml:mi>C</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

          with <inline-formula><mml:math id="M25" display="inline"><mml:mrow><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, 2 denoting the specific phytoplankton types and <inline-formula><mml:math id="M26" display="inline"><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, 2 the
specific zooplankton types. <inline-formula><mml:math id="M27" display="inline"><mml:mi>C</mml:mi></mml:math></inline-formula> denotes carbon concentration specific to <inline-formula><mml:math id="M28" display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> (phytoplankton) and <inline-formula><mml:math id="M29" display="inline"><mml:mi>Z</mml:mi></mml:math></inline-formula> (zooplankton) in mg m<inline-formula><mml:math id="M30" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, while Chl denotes
chlorophyll <inline-formula><mml:math id="M31" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in mg m<inline-formula><mml:math id="M32" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. Photosynthetically active
radiation (PAR) is given as <inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:mi>I</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. DS2013 gives <inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:mi mathvariant="italic">φ</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="normal">PO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">Si</mml:mi></mml:mrow></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M38" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:msub><mml:mi>G</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:msub><mml:mi>m</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> as the phytoplankton maximum growth rate, growth limitation, photosynthesis efficiency parameter, nutrient-specific half-saturation constant, <inline-formula><mml:math id="M41" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> inhibition parameter, zooplankton grazing rates and mortality rates respectively. <inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> denotes zooplankton specific grazing rate with <inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> representing food preference coefficient and half-saturation constant respectively where <inline-formula><mml:math id="M45" display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> denote the total available food for the individual zooplankton. Silicate is not included in flagellate equations. Maximum Chl-to-C ratio (<inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>P</mml:mi><mml:mi mathvariant="normal">max</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula>) is taken from Bagniewski et al. (2011), where they have tuned those parameters for the region south of Iceland. We note that their parameterization is N-based, while ECOSMO II(CHL) uses C-based parameters; thus we applied the conversion following the <inline-formula><mml:math id="M47" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">C</mml:mi><mml:mo>:</mml:mo><mml:mi mathvariant="normal">N</mml:mi></mml:mrow></mml:math></inline-formula> Redfield ratio of 6.625 resulting in flagellates and diatoms with 0.048 and 0.037 mg Chl mg C<inline-formula><mml:math id="M48" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> respectively. In relation to the addition of a prognostic chlorophyll <inline-formula><mml:math id="M49" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> state variable, photosynthetically active radiation <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mi>I</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> at depth undergoing attenuation was modified to have chlorophyll <inline-formula><mml:math id="M51" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> in the exponential term:
          <disp-formula id="Ch1.E12" content-type="numbered"><label>12</label><mml:math id="M52" display="block"><mml:mrow><?xmltex \hack{\hbox\bgroup\fontsize{9.2}{9.2}\selectfont$\displaystyle}?><mml:mi>I</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>I</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mi>exp⁡</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mo>-</mml:mo><mml:msub><mml:mi>k</mml:mi><mml:mi mathvariant="normal">w</mml:mi></mml:msub><mml:mi>z</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>k</mml:mi><mml:mi mathvariant="normal">Chl</mml:mi></mml:msub><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mi>z</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:munderover><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:munderover><mml:msub><mml:mi mathvariant="normal">Chl</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfenced><?xmltex \hack{$\egroup}?><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where <inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:msub><mml:mi>I</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the surface net solar radiation (W m<inline-formula><mml:math id="M54" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) converted to PAR, and <inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:math></inline-formula> identifies the models' horizontal grid points, with <inline-formula><mml:math id="M56" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> the water depth in metres. <inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mi mathvariant="normal">w</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mi mathvariant="normal">Chl</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are light extinction due to water (m<inline-formula><mml:math id="M59" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) and chlorophyll <inline-formula><mml:math id="M60" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration (m<inline-formula><mml:math id="M61" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> mg Chl<inline-formula><mml:math id="M62" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) respectively.</p>
      <p id="d1e1650">In addition to prognostic chlorophyll <inline-formula><mml:math id="M63" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> state variables, phytoplankton and
zooplankton loss terms now have an on/off switch regulated by a minimum
concentration criterion preventing them from decreasing to very low concentrations. This allows them to recover and quickly respond to suitable
growth conditions experienced in spring. The switch is applied to mortality
and grazing terms for phytoplankton and chlorophyll <inline-formula><mml:math id="M64" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, and to mortality terms for zooplankton. The minimum concentration at which the loss terms are
switched off are 0.1, 0.005 and 0.01 mg C m<inline-formula><mml:math id="M65" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for phytoplankton,
chlorophyll <inline-formula><mml:math id="M66" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and zooplankton respectively.</p>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Model set-up and evaluation framework</title>
      <p id="d1e1694">Model simulations are configured on a relatively coarse grid that varies between 30 and 70 km where the highest resolutions are located in the
mid-North Atlantic (Fig. 2). Although having finer resolution was previously shown to better represent nutrient dynamics for our domain (Samuelsen et al., 2015), the main purpose of our study is to introduce the required model structure for the North Atlantic and Arctic region and the experiments, which requires numerous tests and simulations in parallel. Therefore, we concluded that having a relatively coarse grid size fits better for our purposes.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><?xmltex \currentcnt{2}?><?xmltex \def\figurename{Figure}?><label>Figure 2</label><caption><p id="d1e1699">Subdivision of model domain in prescribed geographical subdomains
used for model quality assessments. The subdomains are as follows: Norwegian
Sea south (NOR. S.), Norwegian Sea north (NOR. N.), Barents Sea (BARENTS),
Kara Sea (KARA), Laptev Sea (LAPTEV), Bering Strait (BERING STR.),
Arctic-Canada (ARC. CAN.), Arctic east (ARC. EAST), Arctic–Atlantic (ARC. ATL.), Greenland Sea (GREENLAND) and the Subpolar Gyre (SPG). The black points in the oceanic regions denote the model grid coordinates. The coordinates for the Station M time-series station location is depicted with the star. While the model domain extends down to the equatorial regions, the figure focuses on the area of interest. Note that the BERING STR. subdomain is within the effective area of the open boundary conditions and thus is relaxed to climatology. WOA18 1981–2010 annual surface temperature climatology (Boyer et al., 2018) is depicted with the coloured shades.</p></caption>
        <?xmltex \igopts{width=199.169291pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f02.png"/>

      </fig>

      <p id="d1e1708">Data for atmospheric forcing is retrieved from ECMWF ERA-Interim reanalysis
with 6 h resolution (Dee et al., 2011). The variables used to force the
ocean model are 10 m winds, air temperature at 2 m, dew-point temperature at 2 m, cloud coverage and total precipitation for the physical model and surface net solar radiation for the biogeochemical model. River runoff is modelled using a hydrological model, TRIP (Oki and Sud, 1998), resulting in a monthly climatology dataset, so the river runoff does not include any interannual variability. River runoff affects only salinity. Nutrient loads from the rivers are derived from the modelled dataset, GlobalNEWS (Mayorga et al., 2010; Seitzinger et al., 2010), and include nitrate, phosphate and silicate. Nutrient loads were scaled by the TRIP runoff volume resulting in monthly climatology loads.</p>
      <p id="d1e1712">The model physics was initialized in 1989 from a spin-up simulation that
started in 1948 forced by the ECHAM6 atmospheric simulation
(Schubert-Frisius and Feser, 2015). The biogeochemical model used inorganic
nutrients (nitrate, phosphate and silicate) from the World Ocean Atlas 2013
(García et al., 2013) monthly climatology as the initial conditions; the
biomass concentrations were initialized with uniform, low values. The same
climatology was used for the relaxation of temperature, salinity, nitrate,
silicate, phosphate and oxygen at the open boundaries. The simulation was
conducted until the end of 2010. The results are evaluated starting with the
year 1991.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e1718">Parameters that were modified between different experiments.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" namest="col2" nameend="col4" align="center">Model experiments </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">EXP1</oasis:entry>
         <oasis:entry colname="col3">EXP2</oasis:entry>
         <oasis:entry colname="col4">EXP3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Diatom maximum growth rate (<inline-formula><mml:math id="M67" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) (1 d<inline-formula><mml:math id="M68" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">1.3</oasis:entry>
         <oasis:entry colname="col3">1.95</oasis:entry>
         <oasis:entry colname="col4">1.75</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Flagellate maximum growth rate (<inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) (1 d<inline-formula><mml:math id="M70" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">1.1</oasis:entry>
         <oasis:entry colname="col3">1.65</oasis:entry>
         <oasis:entry colname="col4">1.45</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Photosynthesis efficiency (<inline-formula><mml:math id="M71" display="inline"><mml:mi mathvariant="italic">φ</mml:mi></mml:math></inline-formula>) (m<inline-formula><mml:math id="M72" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> W<inline-formula><mml:math id="M73" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">0.03</oasis:entry>
         <oasis:entry colname="col3">0.01</oasis:entry>
         <oasis:entry colname="col4">0.012</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Mesozooplankton grazing rate on phytoplankton (<inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) (1 d<inline-formula><mml:math id="M75" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">0.8</oasis:entry>
         <oasis:entry colname="col3">1.2</oasis:entry>
         <oasis:entry colname="col4">1.2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Mesozooplankton grazing rate on microzooplankton (<inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>Z</mml:mi><mml:mi mathvariant="normal">micro</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) (1 d<inline-formula><mml:math id="M77" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">0.5</oasis:entry>
         <oasis:entry colname="col3">0.75</oasis:entry>
         <oasis:entry colname="col4">0.75</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Microzooplankton grazing rate on phytoplankton (<inline-formula><mml:math id="M78" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) (1 d<inline-formula><mml:math id="M79" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">1.0</oasis:entry>
         <oasis:entry colname="col3">1.5</oasis:entry>
         <oasis:entry colname="col4">1.5</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e2029"><?xmltex \hack{\newpage}?>In this study, we employ three sets of simulations (EXP1, EXP2 and EXP3) that use
different phytoplankton growth rates, photosynthesis efficiency and
zooplankton mortality rates (Table 1). EXP1 uses the DS2013 parameter set
which was used for the North Sea and the Baltic Sea. Additionally, we
introduce EXP2 (which uses the parameter set for the operational forecast model for ARC MFC prior to July 2021) and EXP3 (which uses the parameter set for the operational forecast model for ARC MFC currently online following July 2021). Since these parameter sets represent active use cases, the objective analysis of these experiments in the following sections provide the users of ECOSMO a reference on how the model performs with different set-ups and longer timescales. For the purpose of comparing these parameters, EXP2 and EXP3 can be considered as part of the same group against EXP1 such that in both EXP2 and EXP3, phytoplankton growth rates are set higher compared to EXP1. The reasoning behind this increase is a response to deep winter convective mixing and resulting light limitation on growth in the open ocean. To control excessive growth of phytoplankton in the following seasons, zooplankton grazing rates were increased. ECOSMO II has been used as an operational model for the Arctic since 2017, and its parameterization has been tested and improved various times, more than we can document here. Thus the parameter sets for EXP2 and EXP3 are provided here as milestones for ECOSMO II development. To document the development process of the ECOSMO, we present all the experiments representing DS2013 (EXP1), the operational model prior to July 2021 (EXP2) and the next-phase operational model (EXP3). The model evaluation is followed by an overview of the notable aspects of the simulated biogeochemistry of the North Atlantic and the Arctic oceans.</p>
      <p id="d1e2033">In addition to the 3D-HYCOM-ECOSMO II(CHL) simulations, we have also performed a 1D simulation using the General Ocean Turbulence Model (GOTM; Burchard et al., 2006) using the Framework for Aquatic Biogeochemical Models (FABM; Bruggeman and Bolding, 2014) as the online coupler at Station M
(66<inline-formula><mml:math id="M80" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 2<inline-formula><mml:math id="M81" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E) in the Norwegian Sea to present the differences of ECOSMO II and ECOSMO II(CHL) both visually and statistically comparing versions of ECOSMO with and without explicit chlorophyll <inline-formula><mml:math id="M82" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. The details of this set-up are provided in Appendix A1. Station M is a long-term time-series station and is representative of the Norwegian Sea dynamics, and data from Station M are often used for the development of ECOSMO. The dynamics shown in Appendix A1 is representative for regions with similar plankton dynamics (e.g. Norwegian Sea, Barents Sea) and thus can be used as a showcase for the new chlorophyll <inline-formula><mml:math id="M83" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> specific addition. Apart from the improvement of model chlorophyll <inline-formula><mml:math id="M84" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> results, the addition of dynamic chlorophyll <inline-formula><mml:math id="M85" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> establishes a higher level of functionality of ECOSMO such that phytoplankton functional types now have their unique carbon : chlorophyll <inline-formula><mml:math id="M86" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> ratios and initial slope of <inline-formula><mml:math id="M87" display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula>–<inline-formula><mml:math id="M88" display="inline"><mml:mi>I</mml:mi></mml:math></inline-formula> curves which enables better adaptability to different environments, and the model now has better integration with observation systems (e.g. remote sensing) and future improvements toward bio-optical modelling.</p>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Model evaluation</title>
      <p id="d1e2112">In this section, we present a selection of model results to provide an overview of the performance of ECOSMO II(CHL). While the model domain extends to the equatorial regions, our focus is on the Nordic Seas and the Arctic. We present the evaluation of the observable model output against in situ data with the relevant statistics. The focus of this assessment is on the key parameters of the chemical and biological fields on a regional scale where the subdomains defined for model assessment are given in Fig. 2. This approach allows for assessment of the local biogeochemical characteristics of the model. The purpose of this assessment is twofold: (1) to assess the model formulation and its parameterization as a regional hind-casting and forecasting tool, as a component of CMEMS, and (2) to introduce the model as a tool for scientific studies.</p>
      <p id="d1e2115">The extent of the subdomains depicted in Fig. 2 were defined by the geographical definitions of the regions and their environmental setting, as
such the BARENTS region covers the shelf area south and east of Svalbard and
border NOR. N at the opening to the Norwegian Sea where it is deeper and is
highly influenced by the Atlantic inflow. The Norwegian Sea is divided into
north and south to take into account for the differences in day length across
the wide latitude range (20<inline-formula><mml:math id="M89" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>). The border between GREENLAND and NOR. N and S roughly locates the temperature changes of the different water masses in the region (Fig. 2). ARC regions were set to cover sea-ice-covered
regions most of the year. The BERING STR. region was set to separate the boundary conditions from the rest of the domain. KARA and LAPTEV regions have naturally defined borders with the islands around them. SPG region is defined to represent the subpolar gyre region.</p>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Observations</title>
      <p id="d1e2134">The model simulations were evaluated using three different datasets as follows: (1) World Ocean Atlas 2013 (WOA13; García et al., 2013), (2) Institute of Marine Research (2018) data (IMR18), (3) ESA Ocean Colour CCI v5.0 (OC CCI; Ocean Colour Climate Change Initiative; Sathyendranath et al., 2019).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e2140">Simulation statistics (model vs. in situ) specific to each region.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.93}[.93]?><oasis:tgroup cols="17">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="center"/>
     <oasis:colspec colnum="5" colname="col5" align="center"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:colspec colnum="7" colname="col7" align="center"/>
     <oasis:colspec colnum="8" colname="col8" align="center"/>
     <oasis:colspec colnum="9" colname="col9" align="center"/>
     <oasis:colspec colnum="10" colname="col10" align="left"/>
     <oasis:colspec colnum="11" colname="col11" align="right"/>
     <oasis:colspec colnum="12" colname="col12" align="right"/>
     <oasis:colspec colnum="13" colname="col13" align="right"/>
     <oasis:colspec colnum="14" colname="col14" align="left"/>
     <oasis:colspec colnum="15" colname="col15" align="center"/>
     <oasis:colspec colnum="16" colname="col16" align="center"/>
     <oasis:colspec colnum="17" colname="col17" align="center"/>
     <oasis:thead>
       <oasis:row>

         <oasis:entry colname="col1">Variable</oasis:entry>

         <oasis:entry colname="col2">Region</oasis:entry>

         <oasis:entry rowsep="1" namest="col3" nameend="col5">CorrCoef </oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry rowsep="1" namest="col7" nameend="col9">Norm. SD </oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry rowsep="1" namest="col11" nameend="col13" align="center">Bias (%) </oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry rowsep="1" namest="col15" nameend="col17">RMSE (mmol m<inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) </oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1"/>

         <oasis:entry colname="col2"/>

         <oasis:entry colname="col3">Exp1</oasis:entry>

         <oasis:entry colname="col4">Exp2</oasis:entry>

         <oasis:entry colname="col5">Exp3</oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7">Exp1</oasis:entry>

         <oasis:entry colname="col8">Exp2</oasis:entry>

         <oasis:entry colname="col9">Exp3</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">Exp1</oasis:entry>

         <oasis:entry colname="col12">Exp2</oasis:entry>

         <oasis:entry colname="col13">Exp3</oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry colname="col15">Exp1</oasis:entry>

         <oasis:entry colname="col16">Exp2</oasis:entry>

         <oasis:entry colname="col17">Exp3</oasis:entry>

       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1" morerows="2">Nitrate</oasis:entry>

         <oasis:entry colname="col2">Barents</oasis:entry>

         <oasis:entry colname="col3">0.88</oasis:entry>

         <oasis:entry colname="col4">0.86</oasis:entry>

         <oasis:entry colname="col5">0.86</oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7">0.79</oasis:entry>

         <oasis:entry colname="col8">0.63</oasis:entry>

         <oasis:entry colname="col9">0.60</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">13.5</oasis:entry>

         <oasis:entry colname="col12">31.3</oasis:entry>

         <oasis:entry colname="col13">30.5</oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry colname="col15">2.43</oasis:entry>

         <oasis:entry colname="col16">3.34</oasis:entry>

         <oasis:entry colname="col17">3.34</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">NorwegianN</oasis:entry>

         <oasis:entry colname="col3">0.89</oasis:entry>

         <oasis:entry colname="col4">0.87</oasis:entry>

         <oasis:entry colname="col5">0.87</oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7">0.84</oasis:entry>

         <oasis:entry colname="col8">0.66</oasis:entry>

         <oasis:entry colname="col9">0.64</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">0.7</oasis:entry>

         <oasis:entry colname="col12">9.0</oasis:entry>

         <oasis:entry colname="col13">8.6</oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry colname="col15">1.94</oasis:entry>

         <oasis:entry colname="col16">2.39</oasis:entry>

         <oasis:entry colname="col17">2.39</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col2">NorwegianS</oasis:entry>

         <oasis:entry colname="col3">0.83</oasis:entry>

         <oasis:entry colname="col4">0.80</oasis:entry>

         <oasis:entry colname="col5">0.80</oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7">0.83</oasis:entry>

         <oasis:entry colname="col8">0.73</oasis:entry>

         <oasis:entry colname="col9">0.72</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">1.9</oasis:entry>

         <oasis:entry colname="col12">7.8</oasis:entry>

         <oasis:entry colname="col13">6.7</oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry colname="col15">2.25</oasis:entry>

         <oasis:entry colname="col16">2.51</oasis:entry>

         <oasis:entry colname="col17">2.47</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1" morerows="2">Silicate</oasis:entry>

         <oasis:entry colname="col2">Barents</oasis:entry>

         <oasis:entry colname="col3">0.78</oasis:entry>

         <oasis:entry colname="col4">0.74</oasis:entry>

         <oasis:entry colname="col5">0.78</oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7">1.16</oasis:entry>

         <oasis:entry colname="col8">1.18</oasis:entry>

         <oasis:entry colname="col9">0.98</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">71.8</oasis:entry>

         <oasis:entry colname="col12">98.8</oasis:entry>

         <oasis:entry colname="col13">59.5</oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry colname="col15">2.62</oasis:entry>

         <oasis:entry colname="col16">3.41</oasis:entry>

         <oasis:entry colname="col17">2.23</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">NorwegianN</oasis:entry>

         <oasis:entry colname="col3">0.72</oasis:entry>

         <oasis:entry colname="col4">0.67</oasis:entry>

         <oasis:entry colname="col5">0.74</oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7">1.07</oasis:entry>

         <oasis:entry colname="col8">1.02</oasis:entry>

         <oasis:entry colname="col9">0.94</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">46.8</oasis:entry>

         <oasis:entry colname="col12">61.7</oasis:entry>

         <oasis:entry colname="col13">37.9</oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry colname="col15">2.89</oasis:entry>

         <oasis:entry colname="col16">3.49</oasis:entry>

         <oasis:entry colname="col17">2.46</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col2">NorwegianS</oasis:entry>

         <oasis:entry colname="col3">0.73</oasis:entry>

         <oasis:entry colname="col4">0.67</oasis:entry>

         <oasis:entry colname="col5">0.74</oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7">1.02</oasis:entry>

         <oasis:entry colname="col8">1.00</oasis:entry>

         <oasis:entry colname="col9">0.91</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">39.9</oasis:entry>

         <oasis:entry colname="col12">53.0</oasis:entry>

         <oasis:entry colname="col13">31.0</oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry colname="col15">2.63</oasis:entry>

         <oasis:entry colname="col16">3.19</oasis:entry>

         <oasis:entry colname="col17">2.26</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1" morerows="2">Phosphate</oasis:entry>

         <oasis:entry colname="col2">Barents</oasis:entry>

         <oasis:entry colname="col3">0.90</oasis:entry>

         <oasis:entry colname="col4">0.88</oasis:entry>

         <oasis:entry colname="col5">0.88</oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7">0.80</oasis:entry>

         <oasis:entry colname="col8">0.63</oasis:entry>

         <oasis:entry colname="col9">0.61</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">0.7</oasis:entry>

         <oasis:entry colname="col12">13.9</oasis:entry>

         <oasis:entry colname="col13">14.7</oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry colname="col15">0.13</oasis:entry>

         <oasis:entry colname="col16">0.17</oasis:entry>

         <oasis:entry colname="col17">0.17</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">NorwegianN</oasis:entry>

         <oasis:entry colname="col3">0.90</oasis:entry>

         <oasis:entry colname="col4">0.88</oasis:entry>

         <oasis:entry colname="col5">0.89</oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7">0.94</oasis:entry>

         <oasis:entry colname="col8">0.75</oasis:entry>

         <oasis:entry colname="col9">0.72</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">0.0</oasis:entry>

         <oasis:entry colname="col12">7.1</oasis:entry>

         <oasis:entry colname="col13">7.4</oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry colname="col15">0.11</oasis:entry>

         <oasis:entry colname="col16">0.13</oasis:entry>

         <oasis:entry colname="col17">0.13</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col2">NorwegianS</oasis:entry>

         <oasis:entry colname="col3">0.83</oasis:entry>

         <oasis:entry colname="col4">0.81</oasis:entry>

         <oasis:entry colname="col5">0.81</oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7">0.95</oasis:entry>

         <oasis:entry colname="col8">0.84</oasis:entry>

         <oasis:entry colname="col9">0.82</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11"><inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col12">3.8</oasis:entry>

         <oasis:entry colname="col13">3.8</oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry colname="col15">0.13</oasis:entry>

         <oasis:entry colname="col16">0.14</oasis:entry>

         <oasis:entry colname="col17">0.14</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1" morerows="2">Chlorophyll <inline-formula><mml:math id="M92" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col2">Barents</oasis:entry>

         <oasis:entry colname="col3">0.38</oasis:entry>

         <oasis:entry colname="col4">0.29</oasis:entry>

         <oasis:entry colname="col5">0.3</oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7">0.97</oasis:entry>

         <oasis:entry colname="col8">0.61</oasis:entry>

         <oasis:entry colname="col9">0.57</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">6.2</oasis:entry>

         <oasis:entry colname="col12"><inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">62.1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col13"><inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">61.7</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry colname="col15">0.95</oasis:entry>

         <oasis:entry colname="col16">0.92</oasis:entry>

         <oasis:entry colname="col17">0.90</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">NorwegianN</oasis:entry>

         <oasis:entry colname="col3">0.41</oasis:entry>

         <oasis:entry colname="col4">0.33</oasis:entry>

         <oasis:entry colname="col5">0.34</oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7">2.06</oasis:entry>

         <oasis:entry colname="col8">1.25</oasis:entry>

         <oasis:entry colname="col9">1.22</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">68.0</oasis:entry>

         <oasis:entry colname="col12"><inline-formula><mml:math id="M95" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">26.7</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col13"><inline-formula><mml:math id="M96" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">25.1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry colname="col15">1.49</oasis:entry>

         <oasis:entry colname="col16">1.03</oasis:entry>

         <oasis:entry colname="col17">1.00</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">NorwegianS</oasis:entry>

         <oasis:entry colname="col3">0.23</oasis:entry>

         <oasis:entry colname="col4">0.19</oasis:entry>

         <oasis:entry colname="col5">0.20</oasis:entry>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7">1.50</oasis:entry>

         <oasis:entry colname="col8">1.06</oasis:entry>

         <oasis:entry colname="col9">0.97</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">20.3</oasis:entry>

         <oasis:entry colname="col12"><inline-formula><mml:math id="M97" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">36.4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col13"><inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">39.0</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col14"/>

         <oasis:entry colname="col15">1.76</oasis:entry>

         <oasis:entry colname="col16">1.46</oasis:entry>

         <oasis:entry colname="col17">1.40</oasis:entry>

       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <p id="d1e2958">The model's consistency with the large-scale climatological inorganic nutrient distributions was quantified by comparing the regionally averaged monthly inorganic nutrient model data (nitrate, silicate and phosphate) to
WOA13 data. The WOA13 data were horizontally averaged in the model subdomains presented in Fig. 2. Modelled inorganic nutrients were vertically interpolated to 5 and 100 m to match the WOA13 depth levels, spatially averaged within the subdomains and monthly averaged in time to construct corresponding regional time series (see Sect. 4.3; Fig. 3). These monthly time series allowed a model evaluation for the regions, in which the in situ data was not optimal for the statistical analysis. Regional climatology data should be used with caution because WOA13 data are in some places based on very few observations and that may mislead the evaluation process. To detect the regions with low number of observations, WOA13 data points were extracted for each region and were summed up as monthly time series (Fig. A3). As an example, the number of data points for the regions defined as ARC (Fig. 2) were almost negligible compared to the Norwegian Sea or the Barents Sea. Further discussion on this is given in Sect. 4.3.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{3}?><?xmltex \def\figurename{Figure}?><label>Figure 3</label><caption><p id="d1e2964">Evaluation of seasonal cycle of nutrients at 5 and 100 m for the
model (black lines) vs. WOA13 (grey lines) regional monthly averages in the
selected areas Barents, NorwegianS and SPG of the model domain for <bold>(a)</bold> nitrate, <bold>(b)</bold> silicate and <bold>(c)</bold> phosphate. Model experiment (EXP1: black, EXP2: blue, EXP3: orange) and WOA13 spatial standard deviations are plotted for each month as vertical lines). The number of observations for the WOA13 time series is given in Figs. A3–A6.</p></caption>
          <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f03.png"/>

        </fig>

      <p id="d1e2982">A separate evaluation for the model inorganic nutrients (nitrate, silicate and phosphate) and chlorophyll <inline-formula><mml:math id="M99" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> was conducted using the IMR18 in situ data by performing a point-by-point (location and depth) co-location for the
statistical analysis (see Sect. 4.3; Table 2). For each in situ data point, the closest model grid was selected and the vertical profile was interpolated to the observed depth. Data with only “good” flags were used totalling to more than 120 000 data points for each nutrient and chlorophyll <inline-formula><mml:math id="M100" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. While the size of the observed dataset is unique, the regional coverage is
limited to mainly the Norwegian Sea and the Barents Sea (Fig. A5). For this reason, the analysis using WOA13 and IMR18 complement each other well with
one covering wider regions and the other providing a large dataset respectively.</p>
      <p id="d1e2999">A final model chlorophyll evaluation was conducted using OC CCI daily surface chlorophyll <inline-formula><mml:math id="M101" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and downwelling attenuation coefficient at 490 nm (kd490) at 4 km <inline-formula><mml:math id="M102" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 4 km spatial resolution. This dataset is derived from multiple sensors: SeaWIFS, MODIS Aqua, MERIS, SeaWIFS LAC and VIIR. We used
this dataset for the years 1998–2010. Chlorophyll <inline-formula><mml:math id="M103" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and kd490 were remapped to the model grid, and the model chlorophyll <inline-formula><mml:math id="M104" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> was averaged within 1/kd490 (m) depth. In the cases that kd490 data were missing, the model chlorophyll <inline-formula><mml:math id="M105" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> was averaged within 10 m. Model chlorophyll <inline-formula><mml:math id="M106" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> was then statistically analysed using the OC CCI chlorophyll <inline-formula><mml:math id="M107" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, and from this point on, OC CCI chlorophyll <inline-formula><mml:math id="M108" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> is referred to as the satellite chlorophyll <inline-formula><mml:math id="M109" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. Satellite and model data covering the ocean topography shallower than 100 m were masked out. This separate analysis allows us to include chlorophyll <inline-formula><mml:math id="M110" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> data for model evaluation in addition to IMR18 data. We should note that, for the North Atlantic and the Arctic, satellite data were often hindered by cloud, sea-ice coverage and winter darkness.</p>
      <p id="d1e3073">The analyses described above were applied to all of the experiments, EXP1, 2 and 3. Very few direct observations of primary production are available in
our focus region. We have therefore used reported values from the literature
for evaluating the estimated magnitude of primary production (see Sect. 5 for the references).</p>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Statistical methods</title>
      <p id="d1e3084">We used the Institute of Marine Research (2018) dataset for inorganic nutrients and chlorophyll <inline-formula><mml:math id="M111" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> to construct the statistical analyses. The
statistical analyses cover the 1991–2010 period, and only the quality-controlled
data were considered. For each in situ data point, the date and the corresponding horizontal model coordinate were identified, and modelled
nutrient and chlorophyll <inline-formula><mml:math id="M112" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> were vertically interpolated to the depth of the
in situ data point. We computed percentage bias, root mean square
error (RMSE), correlation (corr) and normalized standard deviations (NSDs)
for the co-located data:
            <disp-formula id="Ch1.E13" content-type="numbered"><label>13</label><mml:math id="M113" display="block"><mml:mrow><mml:mi mathvariant="italic">%</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">bias</mml:mi><mml:mo>=</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mo movablelimits="false">∑</mml:mo><mml:mo>(</mml:mo><mml:mi>M</mml:mi><mml:mo>-</mml:mo><mml:mi>O</mml:mi><mml:mo>)</mml:mo><mml:mo>⋅</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:mfenced><mml:mo>/</mml:mo><mml:mo movablelimits="false">∑</mml:mo><mml:mi>O</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          <?xmltex \hack{\newpage}?><?xmltex \hack{\vspace*{-6mm}}?>

                <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M114" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E14"><mml:mtd><mml:mtext>14</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow><mml:mi mathvariant="normal">RMSE</mml:mi><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:mo movablelimits="false">∑</mml:mo><mml:mo>(</mml:mo><mml:mi>M</mml:mi><mml:mo>-</mml:mo><mml:mi>O</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:mi>N</mml:mi></mml:mrow></mml:msqrt><mml:mo>,</mml:mo></mml:mrow></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E15"><mml:mtd><mml:mtext>15</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="normal">corr</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mfenced open="(" close=")"><mml:mrow><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>N</mml:mi></mml:munderover><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>M</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>O</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>O</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced><mml:mo mathsize="2.0em">/</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mfenced close=")" open="("><mml:msqrt><mml:mrow><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>N</mml:mi></mml:munderover><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>M</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>N</mml:mi></mml:munderover><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>O</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>O</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msqrt></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E16"><mml:mtd><mml:mtext>16</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="normal">NSD</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mfenced close=")" open="("><mml:msqrt><mml:mrow><mml:mfenced close=")" open="("><mml:mrow><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>N</mml:mi></mml:munderover><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>M</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced><mml:mo>/</mml:mo><mml:mi>N</mml:mi></mml:mrow></mml:msqrt></mml:mfenced><mml:mo mathsize="2.0em">/</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mfenced open="(" close=")"><mml:msqrt><mml:mrow><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>N</mml:mi></mml:munderover><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>O</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>O</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:mi>N</mml:mi></mml:mrow></mml:msqrt></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            where <inline-formula><mml:math id="M115" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula> means estimated, <inline-formula><mml:math id="M116" display="inline"><mml:mi>O</mml:mi></mml:math></inline-formula> means observed, <inline-formula><mml:math id="M117" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> means the number of data points and <inline-formula><mml:math id="M118" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula> is the individual sample. These statistics were applied to the whole simulated period but are specific to each subdomain for regional evaluations.</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Evaluation of the model experiments</title>
      <p id="d1e3450">In this section, we analyse the model performance against climatology and in
situ data using visual and statistical analysis. We include each experiment
in the analysis as a reference for modelling studies that adopt ECOSMO II(CHL) and showcase the possible outcomes using various parameterization sets.</p>
      <p id="d1e3453">Prior to presenting detailed model results, we note that the model is at a
steady state after 2 years of simulation (1989–1990). For the years 1991–2010, for which we have performed our analyses, the model nitrate rate of change is 0.002, 0.0031 and <inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.0007</mml:mn></mml:mrow></mml:math></inline-formula> mmol N m<inline-formula><mml:math id="M120" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M121" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for average nitrate within 0–100, 0–500 and 0 m – bottom respectively. For the same averaging depths, the model silicate and phosphate rates of change are 0.004, 0.0055 and 0.0057 mmol Si m<inline-formula><mml:math id="M122" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M123" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and 0.00004, 0.00016 and <inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.0026</mml:mn></mml:mrow></mml:math></inline-formula> mmol P m<inline-formula><mml:math id="M125" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M126" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> respectively.</p>
      <p id="d1e3549">Figure 3 depicts ECOSMO II(CHL)'s performance in representing the upper 100 m concentrations of the macronutrients nitrate, silicate and phosphate against monthly climatology. For these climatological comparisons using WOA13 data, model and observed time series are represented at the surface (5 m) and at 100 m. We note that the number of samples for the monthly climatology vary between months and regions (Fig. A3). Especially for the cases of polar
regions and eastern coastal Arctic, the number of data points that were used
to construct the monthly climatology were negligible compared to the remaining southern regions (Fig. 2). We have also included KARA region in the discussion here as there are significant number of data points, though limited to only late summer (months 7–11). Even in the case of the Norwegian and the Barents seas, the number of samples for winter months are significantly lower than the rest of the year.</p>
      <p id="d1e3552">The model is generally in good agreement with the seasonality in climatology
representing the high concentrations in winter and the drawdown of nutrients
in summer, but with noticeably higher winter nutrients in the Barents Sea both at the surface and at 100 m. The modelled Norwegian Sea silicate concentrations are notably higher in winter at the surface and throughout the year at 100 m. Considering the consistent agreement of modelled and observed nitrate and phosphate for the Norwegian Sea, Greenland Sea, late-summer Kara Sea and the subpolar gyre region, the simulated high silicate suggests that further tuning may be required for silicate uptake by diatoms, diatom and opal silicate sinking rates or the remineralization rates of opal. The adopted <inline-formula><mml:math id="M127" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> ratio of nitrate to silicate cellular structure of phytoplankton may not be as applicable for the region. We note that although on average modelled silicate is higher than observed, occasionally diatom productivity (silicate uptake) was limited by the model formulation as silicate values approached 1 mmol m<inline-formula><mml:math id="M128" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Fig. 3). The standard deviations of both the observed and modelled nutrients are large in the case of the Barents and Norwegian seas. The monthly modelled nutrients correspond very well with the climatological values for the surface waters in the southern regions (Norwegian Sea, Greenland Sea and SPG regions) indicating satisfactory model performance on large-scale productivity and its seasonal variability in these regions. The Kara Sea is highly influenced by the coastal nutrient discharges as can be seen from the high standard deviations, especially for silicate including the late summer where we have sufficient data for this analysis. Apart from surface silicate, the model generally performs well for the Kara Sea from month 7 and onwards. In addition to our comments about silicate above, the coastal discharge of nutrients should be improved in future studies, as in this study we used annual climatology for river nutrient discharge.</p>
      <p id="d1e3580">Experiments were generally comparable when the model results were regionally
and monthly averaged (Fig. 3). Notable differences were found for the
mid-summer nitrate and phosphate concentrations for the Barents, Norwegian
and Greenland seas, as the drawdown of these nutrients was better resolved
by EXP1 compared to climatology as EXP1 summertime nutrients were lower than
in EXP2 and 3. A possible reason why EXP1 has larger drawdown of nutrients
during mid-summer is the higher photosynthesis efficiency applied in EXP1
resulting in higher uptake of nutrients and higher zooplankton grazing rate
applied to EXP2 and 3 resulting in higher top-down pressure to phytoplankton
preventing phytoplankton from consuming more nutrients.</p>
      <p id="d1e3583">With point-by-point comparison, for nitrate, model and in situ data correlations are higher than 0.8 for the three regions, with higher correlations at the higher latitudes (Table 2). One possible reason for the slight differences in correlations between lower and higher latitudes is the timing of the sampling. The majority of the sampling in the southern subdomains is held earlier in the year compared to the northern subdomains. As the model consistently initiates the spring bloom later than what is observed, a consequence of the physical model mixing scheme, it results in a later drawdown of nutrients and thus weaker correlations. The consistently occurring late spring bloom was also noted in previous Nordic Seas modelling studies using HYCOM as the physics model (Samuelsen et al., 2009, 2015). They related the bloom-timing issue to the physics model or the missing phytoplankton convection process of early seeding of the spring bloom by phytoplankton that was convected in winter. However, apart from the bloom timing, correlations higher than 0.67 for silicate and 0.8 for nitrate and phosphate in general represent a good agreement on the temporal and vertical nutrient variability.</p>
      <p id="d1e3586">Normalized standard deviations (NSDs) for nitrate are within 0.63–0.84
indicating that the model underrepresents the amplitude of the observed
variability. The model has percentage biases between 0.7 %–9 % for the Norwegian Sea, whereas the bias is 13.5 %–31.3 % for the Barents Sea. For the case of root mean square error (RMSE), modelled nitrate has errors between 1.94–3.34 mmol N m<inline-formula><mml:math id="M129" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. The simulated regional inorganic nutrients (EXP1) against in situ data are depicted in Fig. 4 where we make a point-by-point comparison of the modelled and observed inorganic nutrients. While the statistics include every data point, Fig. 4 depicts the upper 100 m. The observed upper 100 m nitrate maximum reaches 14 mmol N m<inline-formula><mml:math id="M130" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, while the modelled nitrate maximum is <inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:math></inline-formula> mmol N m<inline-formula><mml:math id="M132" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the Barents Sea (Fig. 4a), whereas the nitrate maxima are similar (Fig. 4b) for the Norwegian Sea. The source of the lower bias and RMSE for the Norwegian Sea is also evident in Fig. 4b where the model to observed data points are more scattered around the 1-to-1 line compared to Fig. 4a.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><?xmltex \currentcnt{4}?><?xmltex \def\figurename{Figure}?><label>Figure 4</label><caption><p id="d1e3637">Comparisons of co-located modelled (EXP1) and in situ upper 100 m nitrate: <bold>(a)</bold> Barents Sea, <bold>(b)</bold> Norwegian Sea silicate, <bold>(c)</bold> Barents Sea, <bold>(d)</bold> Norwegian Sea and chlorophyll, <bold>(e)</bold> Barents Sea and <bold>(f)</bold> Norwegian Sea. The <inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> number of points are represented in hexagonal local clusters with shades of grey. Only the upper 100 m points are plotted.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f04.png"/>

        </fig>

      <p id="d1e3676">For silicate, model and in situ data correlations (Table 2) range between 0.67–0.78, and, similar to nitrate, correlations are slightly higher at the higher latitudes. However, silicate variability due to uptake is only dependent on diatom productivity and thus a direct relation to nitrate dynamics should not be expected. Both the Barents and Norwegian Sea modelled maximum silicate values for the upper 100 m are higher than the observations with model percentage biases between 31–98.8 and RMSE between 2.23–3.49 mmol Si m<inline-formula><mml:math id="M134" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. The model performs well for the silicate NSD with values very close to 1 (0.91–1.18) indicating the model represents the amplitude in silicate seasonal variability well. The model is formulated to limit the uptake of silicate with concentrations below 1.0 mmol Si m<inline-formula><mml:math id="M135" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> where the effect is visible in Fig. 4c and d. The sources of high model biases and RMSEs are also evident in these figures where the scattered data points are mostly below the 1-to-1 line.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><?xmltex \def\figurename{Figure}?><label>Figure 5</label><caption><p id="d1e3706">Simulation averaged (EXP1) model results: <bold>(a)</bold> vertically integrated (0–200 m) annual primary production (g C m<inline-formula><mml:math id="M136" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M137" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), <bold>(b)</bold> annually averaged surface chlorophyll <inline-formula><mml:math id="M138" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (mg m<inline-formula><mml:math id="M139" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), and simulation averaged vertically integrated (0–200 m) plankton functional type biomass (g C m<inline-formula><mml:math id="M140" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) <bold>(c)</bold> diatoms, <bold>(d)</bold> microzooplankton, <bold>(e)</bold> flagellates, <bold>(f)</bold> mesozooplankton. The colour bar to <bold>(f)</bold> applies to <bold>(c)</bold>–<bold>(f)</bold>.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f05.png"/>

        </fig>

      <p id="d1e3799">The phosphate statistics are similar to those of nitrate, an expected result
as all phytoplankton consume phosphate with a fixed Redfield <inline-formula><mml:math id="M141" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">N</mml:mi><mml:mo>:</mml:mo><mml:mi mathvariant="normal">P</mml:mi></mml:mrow></mml:math></inline-formula> ratio. Correlations are between 0.81–0.9 with higher values at the higher
latitudes. The NSDs (Table 2) are slightly better than those of nitrate with values between 0.61–0.95 indicating that the model underestimates the amplitude in phosphate variability. In agreement with the underestimated amplitude in variability, observed phosphate maximum for the upper 100 m (not shown) reaches 1.25 mmol P m<inline-formula><mml:math id="M142" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, where the model maximum for all regions is <inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn></mml:mrow></mml:math></inline-formula> mmol P m<inline-formula><mml:math id="M144" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. In terms of percentage biases (<inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.4</mml:mn></mml:mrow></mml:math></inline-formula> to 14.7) and RMSEs (0.11–0.17 mmol P m<inline-formula><mml:math id="M146" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), the model simulates phosphate better than nitrate and silicate.</p>
      <p id="d1e3871">Among the experiments, all perform very similar in terms of nutrient correlations, while for nitrate and phosphate EXP1 performs slightly better
in terms of NSDs, and EXP3 performs slightly better for silicate for the
Barents Sea and EXP2 for the Norwegian Sea, though the differences among the
experiments were almost negligible. Similarly, EXP1 performs better in terms of percentage bias and RMSE for nitrate and phosphate, and EXP3 performs better for
silicate. The slightly better performance of EXP1 for nitrate and phosphate
is also evident in summer averages when compared to climatology as mentioned
before (Fig. 3a and c). The model performance for silicate when using monthly averages shows even fewer differences among the experiments; however, the EXP3 is slightly closer to WOA time series compared to EXP1 (Fig. 3b).</p>
      <p id="d1e3874">In situ chlorophyll <inline-formula><mml:math id="M147" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> correlations for the upper 100 m (Table 2) are between 0.19–0.41, which are below those of inorganic nutrients. However, the model performs acceptably in terms of NSDs. For the Norwegian Sea, EXP3 has the better performance (0.97 and 1.2), and for the Barents Sea, EXP1 performs better (0.97). While EXP1 performs better for the Barents Sea and NorwegianS (6.2 % and 20.3 %) in terms of percentage bias, EXP3 performs better for NorwegianN (<inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">25.1</mml:mn></mml:mrow></mml:math></inline-formula>). Among all the experiments, EXP3 performs better in terms of RMSE for the three regions (0.9–1.4 mg m<inline-formula><mml:math id="M149" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). The concentration ranges (Fig. 4f) are similar (0–10 mg m<inline-formula><mml:math id="M150" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) for both the observed and modelled for the Norwegian Sea indicated by NSDs near 1.0, but the points are scattered away from the 1-to-1 line indicating the low correlations. Model chlorophyll <inline-formula><mml:math id="M151" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> is always below 8 mg m<inline-formula><mml:math id="M152" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for the Barents Sea (Fig. 4e) where the observations show values above 10 mg m<inline-formula><mml:math id="M153" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> indicating the lower NSD is underestimating the amplitude of variability.</p>
</sec>
</sec>
<sec id="Ch1.S5">
  <label>5</label><title>Simulated biogeochemistry of the North Atlantic and the Arctic</title>
      <p id="d1e3960">Primary production (PP) is the foundation for all marine biological production and the most frequently observed rate in BGC models. Still, there
are only few observations of primary production available in the ocean as a
whole, but the high Arctic is particularly poorly sampled (Matrai et al.,
2013). Because the model does not have an explicit term for respiration, we can only extract gross primary production from the model, which is then
compared to observations. The modelled gross annual primary production ranges from above 200 g C m<inline-formula><mml:math id="M154" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M155" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the southern part of the model
domain to almost zero in the central Arctic and features a gradual decrease
from 144.26 to 41.48 g C m<inline-formula><mml:math id="M156" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M157" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> from lower latitudes (SPG) towards the higher latitudes (Barents) respectively, with a sharp decrease to very low values (<inline-formula><mml:math id="M158" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula> g C m<inline-formula><mml:math id="M159" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M160" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) in the sea-ice-covered areas (Fig. 5) as a consequence of light limitation. Rey (1981) estimated the primary production in the Norwegian Coastal Current to range from 90–120 g C m<inline-formula><mml:math id="M161" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M162" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, which agrees well with the values from this model (Fig. 5), although the used coarse resolution model does not
represent a very distinct coastal current. Previous studies have estimated
the primary production in the Fram Strait from 50–80 g C m<inline-formula><mml:math id="M163" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M164" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Hop et al., 2006), while our model show values of 90–100 g C m<inline-formula><mml:math id="M165" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M166" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the Atlantic waters and up to 30–60 g C m<inline-formula><mml:math id="M167" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M168" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> on its western side. Lee et al. (2015) compared multiple Arctic models against in situ observations. Only a few of these observations were in the central Arctic, while the majority were located in the Chukchi Sea, which is very close to the zone where the model is relaxed to climatology. They found a median value of all Arctic observations of 246 mg C m<inline-formula><mml:math id="M169" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> d<inline-formula><mml:math id="M170" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> which corresponds to about 90 g C m<inline-formula><mml:math id="M171" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M172" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. The regional estimates of primary production were similar, but the shelf regions were the most productive. The model results for the regions surrounding the central Arctic Ocean fall in the range of this estimate, but observation base estimates for the central Arctic, although only few are available, are higher than the model results. From Lee et al. (2015) the primary production estimates from the central Arctic varied between 10 and 100 mg C m<inline-formula><mml:math id="M173" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> d<inline-formula><mml:math id="M174" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
(<inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula>–40 g C m<inline-formula><mml:math id="M176" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M177" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) while the model is below 1 g C m<inline-formula><mml:math id="M178" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M179" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. In the model formulation, the ice is blocking more light than what is realistic and ice leads cannot be resolved, so our estimate is expected to be low in ice-covered regions. It is known that both melt ponds and leads can act as windows into the ocean, facilitating blooms (Assmy et al., 2017). The light below the ice will be improved in future versions of the model system. In situ observations in the Arctic range up to more than 5000 mg C m<inline-formula><mml:math id="M180" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> d<inline-formula><mml:math id="M181" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. The model does not reproduce the extremes in primary production, but the mean values are overall consistent with available observations.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><?xmltex \currentcnt{6}?><?xmltex \def\figurename{Figure}?><label>Figure 6</label><caption><p id="d1e4301">Simulated (EXP1) time series of 0–200 m integrated primary
productivity (g C m<inline-formula><mml:math id="M182" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> d<inline-formula><mml:math id="M183" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) for different regions: <bold>(a)</bold> Barents, <bold>(b)</bold> NorwegianN and <bold>(c)</bold> NorwegianS. See Table 3 for annually averaged primary productivities.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f06.png"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><?xmltex \currentcnt{7}?><?xmltex \def\figurename{Figure}?><label>Figure 7</label><caption><p id="d1e4345">Simulated (EXP1) daily averaged time series of each plankton functional type (average of 0–200 m depth range).</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f07.png"/>

      </fig>

      <p id="d1e4355">For the Norwegian and Barents seas, the modelled primary production shows distinct seasonal patterns with almost negligible productivity between
November–April due to low light availability (Fig. 6). During the onset of the spring bloom, production is notably at its highest during May–June followed by a gradual decrease towards late fall. Regional differences in primary production are also evident in year-round time series, where the Norwegian Sea primary productivity is significantly higher than the Barents Sea productivity. The southern part of the Norwegian Sea (NorwegianS) has a notably earlier (<inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> weeks) bloom compared to the northern counterpart.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><?xmltex \currentcnt{3}?><label>Table 3</label><caption><p id="d1e4371">Regional vertically integrated (0–200 m) annual gross primary
production (g C m<inline-formula><mml:math id="M185" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M186" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) and simulation averaged vertically
integrated (0–200 m) plankton functional type biomass (g C m<inline-formula><mml:math id="M187" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; DIA: diatoms, FLA: flagellates, MIC: microzooplankton, MES: mesozooplankton) in EXP1. See Sect. 3 for the definition of the regions. Note that the BERING
STR. subdomain is within the effective area of the open boundary conditions
thus is relaxed to climatology.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="center"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="center"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Region</oasis:entry>
         <oasis:entry colname="col2">PP</oasis:entry>
         <oasis:entry colname="col3">DIA</oasis:entry>
         <oasis:entry colname="col4">FLA</oasis:entry>
         <oasis:entry colname="col5">MIC</oasis:entry>
         <oasis:entry colname="col6">MES</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">g C m<inline-formula><mml:math id="M188" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M189" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">g C m<inline-formula><mml:math id="M190" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">g C m<inline-formula><mml:math id="M191" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">g C m<inline-formula><mml:math id="M192" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">g C m<inline-formula><mml:math id="M193" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Barents</oasis:entry>
         <oasis:entry colname="col2">41.48</oasis:entry>
         <oasis:entry colname="col3">0.311</oasis:entry>
         <oasis:entry colname="col4">0.243</oasis:entry>
         <oasis:entry colname="col5">0.061</oasis:entry>
         <oasis:entry colname="col6">0.847</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">NorwegianN</oasis:entry>
         <oasis:entry colname="col2">98.2</oasis:entry>
         <oasis:entry colname="col3">1.191</oasis:entry>
         <oasis:entry colname="col4">0.442</oasis:entry>
         <oasis:entry colname="col5">0.12</oasis:entry>
         <oasis:entry colname="col6">1.673</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">NorwegianS</oasis:entry>
         <oasis:entry colname="col2">89.26</oasis:entry>
         <oasis:entry colname="col3">0.82</oasis:entry>
         <oasis:entry colname="col4">0.441</oasis:entry>
         <oasis:entry colname="col5">0.108</oasis:entry>
         <oasis:entry colname="col6">1.551</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ArcAtl</oasis:entry>
         <oasis:entry colname="col2">2.6</oasis:entry>
         <oasis:entry colname="col3">0.051</oasis:entry>
         <oasis:entry colname="col4">0.027</oasis:entry>
         <oasis:entry colname="col5">0.007</oasis:entry>
         <oasis:entry colname="col6">0.044</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Laptev</oasis:entry>
         <oasis:entry colname="col2">2.31</oasis:entry>
         <oasis:entry colname="col3">0.063</oasis:entry>
         <oasis:entry colname="col4">0.013</oasis:entry>
         <oasis:entry colname="col5">0.004</oasis:entry>
         <oasis:entry colname="col6">0.031</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ArcEast</oasis:entry>
         <oasis:entry colname="col2">0.22</oasis:entry>
         <oasis:entry colname="col3">0.024</oasis:entry>
         <oasis:entry colname="col4">0.019</oasis:entry>
         <oasis:entry colname="col5">0.002</oasis:entry>
         <oasis:entry colname="col6">0.009</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ArcCan</oasis:entry>
         <oasis:entry colname="col2">0.17</oasis:entry>
         <oasis:entry colname="col3">0.019</oasis:entry>
         <oasis:entry colname="col4">0.016</oasis:entry>
         <oasis:entry colname="col5">0.002</oasis:entry>
         <oasis:entry colname="col6">0.002</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Bering STR</oasis:entry>
         <oasis:entry colname="col2">6.3</oasis:entry>
         <oasis:entry colname="col3">0.117</oasis:entry>
         <oasis:entry colname="col4">0.021</oasis:entry>
         <oasis:entry colname="col5">0.01</oasis:entry>
         <oasis:entry colname="col6">0.091</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Kara</oasis:entry>
         <oasis:entry colname="col2">5.28</oasis:entry>
         <oasis:entry colname="col3">0.094</oasis:entry>
         <oasis:entry colname="col4">0.026</oasis:entry>
         <oasis:entry colname="col5">0.009</oasis:entry>
         <oasis:entry colname="col6">0.067</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Greenland</oasis:entry>
         <oasis:entry colname="col2">34.95</oasis:entry>
         <oasis:entry colname="col3">0.399</oasis:entry>
         <oasis:entry colname="col4">0.153</oasis:entry>
         <oasis:entry colname="col5">0.046</oasis:entry>
         <oasis:entry colname="col6">0.595</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SPG</oasis:entry>
         <oasis:entry colname="col2">144.26</oasis:entry>
         <oasis:entry colname="col3">1.56</oasis:entry>
         <oasis:entry colname="col4">0.647</oasis:entry>
         <oasis:entry colname="col5">0.214</oasis:entry>
         <oasis:entry colname="col6">2.128</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e4787"><?xmltex \hack{\newpage}?>The simulated seasonal evolution of primary production reflects the growth
of plankton functional types, with diatoms (compared to flagellates) being
the dominant type in the Nordic Seas spring bloom (Fig. 7). A relatively minor flagellate bloom follows a few weeks after that of diatoms. Zooplankton biomass increase from May–June in response to phytoplankton growth and is maintained until the end of the year. Note that ECOSMO II(CHL) allows zooplankton to feed on detritus, which contribute to zooplankton-sustaining growth beyond the seasons of phytoplankton activity. Towards the lower latitudes, south of 45<inline-formula><mml:math id="M194" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, flagellates maintain a similar annually integrated productivity (<inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn></mml:mrow></mml:math></inline-formula> vs. <inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn></mml:mrow></mml:math></inline-formula> g C m<inline-formula><mml:math id="M197" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) to that of
diatoms (Fig. 5c–e). Mesozooplankton are the dominant grazer in all regions
(Fig. 5d–f). Similar to primary production, the NorwegianN and NorwegianS
functional type biomasses are higher compared to Barents functional type
biomasses with daily 200 m averaged biomasses reaching 75–100 mg C m<inline-formula><mml:math id="M198" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for diatoms and mesozooplankton in the Norwegian Sea, and <inline-formula><mml:math id="M199" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">50</mml:mn></mml:mrow></mml:math></inline-formula> mg C m<inline-formula><mml:math id="M200" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for the Barents Sea respectively. For both Barents and Norwegian seas, flagellate and microzooplankton biomasses do not exceed <inline-formula><mml:math id="M201" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">25</mml:mn></mml:mrow></mml:math></inline-formula> mg C m<inline-formula><mml:math id="M202" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> during their highest productive seasons
(Fig. 7).</p>
      <p id="d1e4889">The model predicts regionally high annually averaged inorganic nutrient
concentrations for the subpolar gyre compared to the Norwegian and Barents seas which is also reflected in monthly and regionally averaged concentrations (Fig. 8) with relatively lower concentrations in the coastal regions of the Nordic Seas compared to their offshore regions. The model also predicts a contrast between nutrient-specific regions of high concentrations. Nitrate concentrations are higher at the lower latitudes, whereas phosphate and silicate are higher towards the higher latitudes. These features generally agree with the features of WOA2013 data (Fig. 8). As the model is relaxed towards the climatology at the Bering Strait through a sponge layer in the model domain, the overall high nutrient concentrations near the Bering Strait and especially the high silicate concentrations at the Siberian coast due to the higher <inline-formula><mml:math id="M203" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">Si</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">N</mml:mi></mml:mrow></mml:math></inline-formula> ratio of Pacific origin water masses compared to the Atlantic water masses and the addition of high <inline-formula><mml:math id="M204" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">Si</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">N</mml:mi></mml:mrow></mml:math></inline-formula> ratio river discharge is reflected in the modelled annual averages. As mentioned earlier, the model does not allow light to penetrate sea ice. For this reason, the model overestimates surface inorganic nutrients compared to climatology below the sea ice as these nutrients are not consumed by primary production but are only affected by transport and remineralization. Overall, the model performs well in terms of <inline-formula><mml:math id="M205" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">N</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">P</mml:mi></mml:mrow></mml:math></inline-formula> molar ratios (<inline-formula><mml:math id="M206" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">PO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>; Fig. A4). Both model and climatology suggest a higher <inline-formula><mml:math id="M207" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">N</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">P</mml:mi></mml:mrow></mml:math></inline-formula> ratio for the Nordic Seas and lower latitudes (<inline-formula><mml:math id="M208" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:math></inline-formula>–16). At the northern and southern Barents Sea, the climatology has a lower <inline-formula><mml:math id="M209" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">N</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">P</mml:mi></mml:mrow></mml:math></inline-formula> ratio (<inline-formula><mml:math id="M210" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">7</mml:mn></mml:mrow></mml:math></inline-formula>) but has a high ratio at the ice-edge region (<inline-formula><mml:math id="M211" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">17</mml:mn></mml:mrow></mml:math></inline-formula>). In contrast, the model
predicts a more regular <inline-formula><mml:math id="M212" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">N</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">P</mml:mi></mml:mrow></mml:math></inline-formula> distribution with a gradual decrease from 16 to 12 from lower to higher latitudes at the Barents Sea.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><?xmltex \currentcnt{8}?><?xmltex \def\figurename{Figure}?><label>Figure 8</label><caption><p id="d1e5015">Simulation averaged (EXP1; mmol m<inline-formula><mml:math id="M213" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) <bold>(a)</bold> nitrate, <bold>(b)</bold> phosphate and <bold>(c)</bold> silicate for 5 and 100 m depth and corresponding WOA2013 annual climatologies.</p></caption>
        <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f08.png"/>

      </fig>

</sec>
<sec id="Ch1.S6">
  <label>6</label><?xmltex \opttitle{Model chlorophyll~$a$ against satellite data and concluding remark on experiments}?><title>Model chlorophyll <inline-formula><mml:math id="M214" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> against satellite data and concluding remark on experiments</title>
      <p id="d1e5061">Here we present the evaluation of each model experiment against satellite
chlorophyll <inline-formula><mml:math id="M215" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. Since the parameters in EXP2 and EXP3 are used in open-ocean
operational models, their performance in representing satellite chlorophyll <inline-formula><mml:math id="M216" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> is vital for the assimilation of chlorophyll <inline-formula><mml:math id="M217" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> in the operational model. The comparisons of co-located surface in situ, model and satellite data are given in Fig. 9, and their statistics are summarized in
Table 4. The purpose of comparing the satellite data to both in situ and model data is to evaluate the satellite product itself for the region, as satellite products are prone to uncertainties based on the algorithms used and are related to differences in absorption and backscattering properties of phytoplankton and concentrations of coloured-dissolved organic matter (CDOM) and minerals (Dierssen, 2010). Thus, in the absence of in situ data, we have a better understanding when model and satellite data are compared. Table 5 summarizes model statistics against satellite data, which is both independent of the in situ samples, and, due to the volume of satellite data, the statistics here are based on a much more extensive dataset compared to the statistics in Table 4.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><?xmltex \currentcnt{9}?><?xmltex \def\figurename{Figure}?><label>Figure 9</label><caption><p id="d1e5087">Estimated surface chlorophyll <inline-formula><mml:math id="M218" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> data against in situ observations (<inline-formula><mml:math id="M219" display="inline"><mml:mrow><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (mg m<inline-formula><mml:math id="M220" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>). Region-wide averages are depicted with the large markers representative of the individual points depicted with the same colours in the background with smaller-sized markers.</p></caption>
        <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f09.png"/>

      </fig>

<?xmltex \floatpos{h!}?><table-wrap id="Ch1.T4" specific-use="star"><?xmltex \currentcnt{4}?><label>Table 4</label><caption><p id="d1e5133">Estimated chlorophyll <inline-formula><mml:math id="M221" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> statistics against in situ surface
chlorophyll <inline-formula><mml:math id="M222" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. Data points that are co-located with in situ data locations
only are used. Co-located satellite data is also compared against in situ data for reference. See Sect. 3 for the calculation of statistics.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="12">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="center"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="center"/>
     <oasis:colspec colnum="8" colname="col8" align="center"/>
     <oasis:colspec colnum="9" colname="col9" align="left"/>
     <oasis:colspec colnum="10" colname="col10" align="right"/>
     <oasis:colspec colnum="11" colname="col11" align="center"/>
     <oasis:colspec colnum="12" colname="col12" align="center"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" namest="col2" nameend="col4" align="center">Barents </oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry rowsep="1" namest="col6" nameend="col8" align="center">NorwegianN </oasis:entry>
         <oasis:entry colname="col9"/>
         <oasis:entry rowsep="1" namest="col10" nameend="col12" align="center">NorwegianS </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Bias</oasis:entry>
         <oasis:entry colname="col3">RMSE</oasis:entry>
         <oasis:entry colname="col4">Norm.</oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">Bias</oasis:entry>
         <oasis:entry colname="col7">RMSE</oasis:entry>
         <oasis:entry colname="col8">Norm.</oasis:entry>
         <oasis:entry colname="col9"/>
         <oasis:entry colname="col10">Bias</oasis:entry>
         <oasis:entry colname="col11">RMSE</oasis:entry>
         <oasis:entry colname="col12">Norm.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(%)</oasis:entry>
         <oasis:entry colname="col3">(mg m<inline-formula><mml:math id="M223" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">SD</oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">(%)</oasis:entry>
         <oasis:entry colname="col7">(mg m<inline-formula><mml:math id="M224" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col8">SD</oasis:entry>
         <oasis:entry colname="col9"/>
         <oasis:entry colname="col10">(%)</oasis:entry>
         <oasis:entry colname="col11">(mg m<inline-formula><mml:math id="M225" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col12">SD</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Satellite</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M226" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5.32</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.60</oasis:entry>
         <oasis:entry colname="col4">0.65</oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M227" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.34</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7">0.66</oasis:entry>
         <oasis:entry colname="col8">0.51</oasis:entry>
         <oasis:entry colname="col9"/>
         <oasis:entry colname="col10"><inline-formula><mml:math id="M228" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">16.11</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col11">0.80</oasis:entry>
         <oasis:entry colname="col12">0.53</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">EXP1</oasis:entry>
         <oasis:entry colname="col2">39.75</oasis:entry>
         <oasis:entry colname="col3">1.21</oasis:entry>
         <oasis:entry colname="col4">1.52</oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">178.25</oasis:entry>
         <oasis:entry colname="col7">2.85</oasis:entry>
         <oasis:entry colname="col8">3.50</oasis:entry>
         <oasis:entry colname="col9"/>
         <oasis:entry colname="col10">140.56</oasis:entry>
         <oasis:entry colname="col11">2.74</oasis:entry>
         <oasis:entry colname="col12">2.54</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">EXP2</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M229" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">55.69</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">1.08</oasis:entry>
         <oasis:entry colname="col4">1.15</oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">50.76</oasis:entry>
         <oasis:entry colname="col7">1.87</oasis:entry>
         <oasis:entry colname="col8">2.68</oasis:entry>
         <oasis:entry colname="col9"/>
         <oasis:entry colname="col10">39.59</oasis:entry>
         <oasis:entry colname="col11">1.89</oasis:entry>
         <oasis:entry colname="col12">1.85</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">EXP3</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M230" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">51.21</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">1.03</oasis:entry>
         <oasis:entry colname="col4">1.02</oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">43.32</oasis:entry>
         <oasis:entry colname="col7">1.67</oasis:entry>
         <oasis:entry colname="col8">2.43</oasis:entry>
         <oasis:entry colname="col9"/>
         <oasis:entry colname="col10">23.50</oasis:entry>
         <oasis:entry colname="col11">1.66</oasis:entry>
         <oasis:entry colname="col12">1.59</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \floatpos{p}?><table-wrap id="Ch1.T5" orientation="landscape"><?xmltex \currentcnt{5}?><label>Table 5</label><caption><p id="d1e5517">Model chlorophyll <inline-formula><mml:math id="M231" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> statistics against satellite data. See Sect. 3
for the calculation of statistics.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.89}[.89]?><oasis:tgroup cols="20">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="center"/>
     <oasis:colspec colnum="5" colname="col5" align="center"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="center"/>
     <oasis:colspec colnum="9" colname="col9" align="center"/>
     <oasis:colspec colnum="10" colname="col10" align="center"/>
     <oasis:colspec colnum="11" colname="col11" align="left"/>
     <oasis:colspec colnum="12" colname="col12" align="right"/>
     <oasis:colspec colnum="13" colname="col13" align="center"/>
     <oasis:colspec colnum="14" colname="col14" align="center"/>
     <oasis:colspec colnum="15" colname="col15" align="right"/>
     <oasis:colspec colnum="16" colname="col16" align="left"/>
     <oasis:colspec colnum="17" colname="col17" align="right"/>
     <oasis:colspec colnum="18" colname="col18" align="center"/>
     <oasis:colspec colnum="19" colname="col19" align="center"/>
     <oasis:colspec colnum="20" colname="col20" align="center"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" namest="col2" nameend="col5" align="center">Barents </oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry rowsep="1" namest="col7" nameend="col10" align="center">NorwegianN </oasis:entry>
         <oasis:entry colname="col11"/>
         <oasis:entry rowsep="1" namest="col12" nameend="col15" align="center">NorwegianS </oasis:entry>
         <oasis:entry colname="col16"/>
         <oasis:entry rowsep="1" namest="col17" nameend="col20" align="center">SPG </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Bias</oasis:entry>
         <oasis:entry colname="col3">RMSE</oasis:entry>
         <oasis:entry colname="col4">Norm.</oasis:entry>
         <oasis:entry colname="col5">CorrCoef</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7">Bias</oasis:entry>
         <oasis:entry colname="col8">RMSE</oasis:entry>
         <oasis:entry colname="col9">Norm.</oasis:entry>
         <oasis:entry colname="col10">CorrCoef</oasis:entry>
         <oasis:entry colname="col11"/>
         <oasis:entry colname="col12">Bias</oasis:entry>
         <oasis:entry colname="col13">RMSE</oasis:entry>
         <oasis:entry colname="col14">Norm.</oasis:entry>
         <oasis:entry colname="col15">CorrCoef</oasis:entry>
         <oasis:entry colname="col16"/>
         <oasis:entry colname="col17">Bias</oasis:entry>
         <oasis:entry colname="col18">RMSE</oasis:entry>
         <oasis:entry colname="col19">Norm.</oasis:entry>
         <oasis:entry colname="col20">CorrCoef</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(%)</oasis:entry>
         <oasis:entry colname="col3">(mg m<inline-formula><mml:math id="M232" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">SD</oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7">(%)</oasis:entry>
         <oasis:entry colname="col8">(mg m<inline-formula><mml:math id="M233" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col9">SD</oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
         <oasis:entry colname="col12">(%)</oasis:entry>
         <oasis:entry colname="col13">(mg m<inline-formula><mml:math id="M234" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col14">SD</oasis:entry>
         <oasis:entry colname="col15"/>
         <oasis:entry colname="col16"/>
         <oasis:entry colname="col17">(%)</oasis:entry>
         <oasis:entry colname="col18">(mg m<inline-formula><mml:math id="M235" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col19">SD</oasis:entry>
         <oasis:entry colname="col20"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">EXP1</oasis:entry>
         <oasis:entry colname="col2">56.23</oasis:entry>
         <oasis:entry colname="col3">2.21</oasis:entry>
         <oasis:entry colname="col4">1.45</oasis:entry>
         <oasis:entry colname="col5">0.0</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7">203.51</oasis:entry>
         <oasis:entry colname="col8">2.95</oasis:entry>
         <oasis:entry colname="col9">4.52</oasis:entry>
         <oasis:entry colname="col10">0.0</oasis:entry>
         <oasis:entry colname="col11"/>
         <oasis:entry colname="col12">130.72</oasis:entry>
         <oasis:entry colname="col13">2.45</oasis:entry>
         <oasis:entry colname="col14">4.03</oasis:entry>
         <oasis:entry colname="col15">0.0</oasis:entry>
         <oasis:entry colname="col16"/>
         <oasis:entry colname="col17">140.33</oasis:entry>
         <oasis:entry colname="col18">2.28</oasis:entry>
         <oasis:entry colname="col19">5.60</oasis:entry>
         <oasis:entry colname="col20">0.01</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">EXP2</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M236" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">15.73</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">1.78</oasis:entry>
         <oasis:entry colname="col4">1.05</oasis:entry>
         <oasis:entry colname="col5">0.05</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7">59.69</oasis:entry>
         <oasis:entry colname="col8">1.88</oasis:entry>
         <oasis:entry colname="col9">3.16</oasis:entry>
         <oasis:entry colname="col10">0.28</oasis:entry>
         <oasis:entry colname="col11"/>
         <oasis:entry colname="col12">26.84</oasis:entry>
         <oasis:entry colname="col13">1.69</oasis:entry>
         <oasis:entry colname="col14">2.97</oasis:entry>
         <oasis:entry colname="col15">0.25</oasis:entry>
         <oasis:entry colname="col16"/>
         <oasis:entry colname="col17">10.34</oasis:entry>
         <oasis:entry colname="col18">1.29</oasis:entry>
         <oasis:entry colname="col19">3.33</oasis:entry>
         <oasis:entry colname="col20">0.27</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">EXP3</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M237" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">22.83</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">1.67</oasis:entry>
         <oasis:entry colname="col4">0.91</oasis:entry>
         <oasis:entry colname="col5">0.05</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7">52.12</oasis:entry>
         <oasis:entry colname="col8">1.75</oasis:entry>
         <oasis:entry colname="col9">2.95</oasis:entry>
         <oasis:entry colname="col10">0.28</oasis:entry>
         <oasis:entry colname="col11"/>
         <oasis:entry colname="col12">17.70</oasis:entry>
         <oasis:entry colname="col13">1.51</oasis:entry>
         <oasis:entry colname="col14">2.67</oasis:entry>
         <oasis:entry colname="col15">0.26</oasis:entry>
         <oasis:entry colname="col16"/>
         <oasis:entry colname="col17">8.12</oasis:entry>
         <oasis:entry colname="col18">1.25</oasis:entry>
         <oasis:entry colname="col19">3.23</oasis:entry>
         <oasis:entry colname="col20">0.26</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <p id="d1e5978">For the three regions of interest, the satellite data have a negative bias
against the in situ data (Table 4). The percentage bias is minor for the Barents region (<inline-formula><mml:math id="M238" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5.32</mml:mn></mml:mrow></mml:math></inline-formula> %), but for the Norwegian Sea, the biases are <inline-formula><mml:math id="M239" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.34</mml:mn></mml:mrow></mml:math></inline-formula> % and <inline-formula><mml:math id="M240" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">16.11</mml:mn></mml:mrow></mml:math></inline-formula> % for the north and south respectively. The NSDs range between 0.51–0.65 mg m<inline-formula><mml:math id="M241" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> suggesting that satellite chlorophyll <inline-formula><mml:math id="M242" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> underrepresents the amplitude of the in situ observed variability of chlorophyll <inline-formula><mml:math id="M243" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. Satellite chlorophyll <inline-formula><mml:math id="M244" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> RMSEs range between 0.6–0.8 mg m<inline-formula><mml:math id="M245" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p>
      <p id="d1e6057">EXP1 has higher chlorophyll <inline-formula><mml:math id="M246" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration compared to EXP2 and EXP3. This
is visually evident when model and satellite data are plotted against in situ data (Fig. 9) where EXP2 and EXP3 generally form clusters distinct from EXP1. EXP1 chlorophyll <inline-formula><mml:math id="M247" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> are mainly located at the right side of the 1-to-1 line suggesting a positive bias against the in situ data evident in Table 4 with 39.75 % for the Barents Sea and 178.25 % and 140.56 % for the north and south Norwegian Sea respectively. The RMSEs and NSDs are also higher compared to EXP2 and EXP3. Relatively, EXP1 is the least representative of the in situ chlorophyll <inline-formula><mml:math id="M248" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> data among the experiments. EXP2 and EXP3 overestimate chlorophyll <inline-formula><mml:math id="M249" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> for the Norwegian Sea with percentage biases ranging between 23.5 %–50.76 %, and over-representing the amplitude of variability with NSDs ranging between 1.59–2.68 mg m<inline-formula><mml:math id="M250" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. For the Barents Sea, while EXP2 and EXP3 have negative biases and RMSEs around <inline-formula><mml:math id="M251" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> mg m<inline-formula><mml:math id="M252" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, their NSDs show that they correctly estimate the amplitude of variability. With a much larger number of data points, the model error statistics computed from satellite data are similar (Table 5) with EXP1 resulting in the highest chlorophyll <inline-formula><mml:math id="M253" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> values and statistically performing the worst compared to EXP2 and EXP3. Notably, EXP2 and EXP3 biases are much lower compared to the statistics against in situ data with the exception of NorwegianN, as well as performing with fewer errors overall. Satellite data also increase the regional coverage of the statistical analyses where SPG region statistics show that EXP2 and EXP3 outperform the EXP1 statistics (Table 5). The consistent higher bias of EXP1 compared EXP2 and EXP3 can be explained by its higher photosynthesis efficiency (Table 1). EXP1 shows a very fast primary production response to light availability during the spring bloom period with notably higher chlorophyll <inline-formula><mml:math id="M254" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentrations compared to the observations (results not shown) evident in the high percentage biases, whereas chlorophyll <inline-formula><mml:math id="M255" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentrations in EXP2 and EXP3 are closer to observed values during spring bloom. Originally, the ECOSMO II parameterization was set for the North Sea and the Baltic Sea with different light conditions. In the open ocean such a high response curve leads to an overestimate of the bloom. However, winter
convective mixing is very deep in the Nordic Seas; thus the light is a limiting factor on growth. To overcome deep mixing and prevent a late spring
bloom, the phytoplankton were allowed to have very high growth rates for
EXP2, and relatively fewer higher growth parameters were set for EXP3. Statistically and visually (Fig. 9), both EXP2 and EXP3 are very similar, with EXP3 performing slightly better statistically.</p>
      <p id="d1e6144">The statistical analysis performed against satellite chlorophyll <inline-formula><mml:math id="M256" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> highlights the use of satellite data as an independent dataset for model evaluation, and its domain-wide (though limited to surface) coverage allows for a more composite evaluation of the model as a whole. Satellite data is acquired in near-real time and thus presents a valuable opportunity for an operational model validation, whereas model validation with in situ data has significant delays (though it is very valuable for hind-cast evaluation). Recent additions to satellite datasets such as the phytoplankton functional types (e.g. <uri>https://doi.org/10.48670/moi-00099</uri>) further detail the use of satellite data for models. As an operational model, ECOSMO II(CHL) works well with satellite data with the inclusion of explicit
chlorophyll <inline-formula><mml:math id="M257" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> variables for each phytoplankton functional type (PFT). ECOSMO II(CHL) not
only better resolves surface chlorophyll <inline-formula><mml:math id="M258" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> with its
light-dependent dynamic carbon : chlorophyll <inline-formula><mml:math id="M259" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> ratios (see Sect. A1), PFT
specific parameters such as initial slope of <inline-formula><mml:math id="M260" display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula>–<inline-formula><mml:math id="M261" display="inline"><mml:mi>I</mml:mi></mml:math></inline-formula> curves add further details to model adaptability to varying environmental conditions (Fig. A1d)
compared to an average constant ratio common to all PFTs. PFT-specific model
configurations further synergize with satellite PFT observations in the
context of operational biogeochemical modelling. Future iterations of ECOSMO
should also include such kinds of evaluations. An important addition to
explicit chlorophyll <inline-formula><mml:math id="M262" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> variables is the inclusion of the initial slope of <inline-formula><mml:math id="M263" display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula>–<inline-formula><mml:math id="M264" display="inline"><mml:mi>I</mml:mi></mml:math></inline-formula> curves to light limitation on growth. In this study, light limitation was approached in a PFT- and chlorophyll-<inline-formula><mml:math id="M265" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>-independent fashion (Eq. 4). Future versions of ECOSMO should adopt ways (e.g. Evans and Parslow, 1985) to include the PFT-specific <inline-formula><mml:math id="M266" display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula>–<inline-formula><mml:math id="M267" display="inline"><mml:mi>I</mml:mi></mml:math></inline-formula> curve slopes to take full advantage of the explicit chlorophyll a variable. This would allow PFTs to differentiate their niche light conditions for production and further allow better integration with the bio-optical modelling of the marine environment.</p>
      <p id="d1e6237">We note that the statistical analysis results against satellite chlorophyll <inline-formula><mml:math id="M268" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> contradict the statistics against in situ data (Sect. 4.3), as EXP1 performed better in some cases such as percentage bias for the Barents Sea and
south Norwegian Sea. However, in the analysis against satellite chlorophyll <inline-formula><mml:math id="M269" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, EXP1 was statistically outperformed by EXP2 and EXP3. The first possible cause of this difference may be that the in situ data and satellite data are different datasets such that they cover different locations and seasons and use different size of data points. In situ data were restricted in both the overall number of data points and the seasons as most of the data were from late spring and onwards, whereas satellite data also cover earlier parts of the year under favourable weather conditions. As a result, model statistics may have a seasonal bias towards the timing of the in situ
sampling. Second, satellite data cover only the surface of the water column
where in situ chlorophyll <inline-formula><mml:math id="M270" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> were well below the penetration depth of the
satellites which might affect the statistics.</p>
</sec>
<sec id="Ch1.S7" sec-type="conclusions">
  <label>7</label><title>Conclusions</title>
      <p id="d1e6269">In this paper we present the mathematical description of ECOSMO II(CHL) which is used as the biogeochemical model for the operational forecasting of the Arctic Ocean. We document ECOSMO II(CHL) model performance by objectively analysing the model inorganic nutrients and chlorophyll <inline-formula><mml:math id="M271" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> against available data spanning from climatology to in situ and satellite chlorophyll <inline-formula><mml:math id="M272" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> data. We compare three experiments with different parameters representing the original implementation of ECOSMO II, CMEMS Arctic operational ECOSMO II(CHL) for the years 2016–2021 and the current (since June 2021) operational ECOSMO II(CHL). Through presenting the model description and its evaluation, we document the performance of ECOSMO for each of these use cases for the users of the model. While each set-up performs better for some variables or datasets, the qualitative and quantitative evaluation of the model results of inorganic nutrients, chlorophyll <inline-formula><mml:math id="M273" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and primary production for each case demonstrated that the model is consistent with the large-scale climatological nutrient variability and is capable of representing regional and seasonal changes. The model primary production agrees with previous measurements. ECOSMO II(CHL) benefits from the use of an explicit definition of phytoplankton functional type chlorophyll <inline-formula><mml:math id="M274" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> implementation, i.e. the use of phytoplankton-specific dynamic chlorophyll <inline-formula><mml:math id="M275" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>-to-carbon ratios in reference to a fixed ratio in the original model, with improved surface estimations of chlorophyll <inline-formula><mml:math id="M276" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, and gains added value towards improving model evaluation opportunities using satellite observations and phytoplankton-functional-type-specific additions to model structure. In its current state, ECOSMO II(CHL) with its intermediate-complexity definition of the North Atlantic and Arctic Ocean ecosystem structure including a sediment layer is a capable modelling tool for both scientific and operational use. The modelling structure presented in this study, ECOSMO II(CHL), including the physical model, HYCOM, forms the basis of the modelling framework that the future updates will build on.</p>
</sec>

      
      </body>
    <back><app-group>

<app id="App1.Ch1.S1">
  <?xmltex \currentcnt{A}?><label>Appendix A</label><title>ECOSMO II(CHL) 1D model experiment and additional material on observed dataset </title>
<sec id="App1.Ch1.S1.SS1">
  <label>A1</label><?xmltex \opttitle{Comparison of ECOSMO~II and ECOSMO~II(CHL) chlorophyll~$a$ dynamics at Station~M}?><title>Comparison of ECOSMO II and ECOSMO II(CHL) chlorophyll <inline-formula><mml:math id="M277" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> dynamics at Station M</title>

      <?xmltex \floatpos{t}?><fig id="App1.Ch1.S1.F10" specific-use="star"><?xmltex \currentcnt{A1}?><?xmltex \def\figurename{Figure}?><label>Figure A1</label><caption><p id="d1e6343">ECOSMO II chlorophyll <inline-formula><mml:math id="M278" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> seasonal evolution is compared to ECOSMO II(CHL) using a 27-year (1990–2016) 1D simulation at Station M (66<inline-formula><mml:math id="M279" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 2<inline-formula><mml:math id="M280" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E) in the Norwegian Sea. Results provided here are the averages of the last 22 years (1995–2016) of the simulations given as annual climatologies. Panels <bold>(a)</bold> and <bold>(b)</bold> depict chlorophyll <inline-formula><mml:math id="M281" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentrations of ECOSMO II and ECOSMO II(CHL) respectively, <bold>(c)</bold> depicts the chlorophyll <inline-formula><mml:math id="M282" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> difference of the two simulations, and <bold>(d)</bold> depicts the diatom and flagellate averages of carbon : chlorophyll <inline-formula><mml:math id="M283" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> ratios.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f10.png"/>

        </fig>

      <p id="d1e6411">In this section we present a 1D model set-up at Station M (66<inline-formula><mml:math id="M284" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N,
2<inline-formula><mml:math id="M285" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E) in the Norwegian Sea using GOTM as the physics model using 1 h interval atmospheric forcing. The location of the station resides in the
Norwegian Sea south region depicted in Fig. 2. We performed a 27-year run
starting in 1990 using WOA2013 profiles from January climatology for the
biogeochemical variables and considered the first 5 years as the spin-up
period. Model results and statistics provided in Figure A1 and Table A1 are
calculated from the last 22 years. Statistical analysis was performed using
the Station M time-series data which is included in the Institute of Marine
Research (2018) dataset described in Sect. 4.2. We assumed a carbon : chlorophyll <inline-formula><mml:math id="M286" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> ratio of 60 for ECOSMO II to perform the analyses using the total phytoplankton biomass. The chlorophyll <inline-formula><mml:math id="M287" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> depiction from ECOSMO II therefore indicates only the phytoplankton biomass and does not affect the model in any way, whereas in the case of ECOSMO II(CHL), chlorophyll <inline-formula><mml:math id="M288" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> is explicitly represented for each phytoplankton type and the results are real model chlorophyll <inline-formula><mml:math id="M289" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> outputs. EXP3 parameters are used for these simulations.</p>

<?xmltex \floatpos{t}?><table-wrap id="App1.Ch1.S1.T6" specific-use="star"><?xmltex \currentcnt{A1}?><label>Table A1</label><caption><p id="d1e6465">Comparison of ECOSMO II and ECOSMO II(CHL) chlorophyll <inline-formula><mml:math id="M290" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> statistics against in situ data depicting 20 m sections of the upper 80 m water column using an output from a 1D model simulated at Station M (66<inline-formula><mml:math id="M291" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 2<inline-formula><mml:math id="M292" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E) in the Norwegian Sea.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="10">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="center"/>
     <oasis:colspec colnum="5" colname="col5" align="center"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="center"/>
     <oasis:colspec colnum="9" colname="col9" align="center"/>
     <oasis:colspec colnum="10" colname="col10" align="center"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" namest="col2" nameend="col5" align="center">ECOSMO II </oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry rowsep="1" namest="col7" nameend="col10" align="center">ECOSMO II(CHL) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Bias</oasis:entry>
         <oasis:entry colname="col3">RMSE</oasis:entry>
         <oasis:entry colname="col4">Norm.</oasis:entry>
         <oasis:entry colname="col5">CorrCoef</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7">Bias</oasis:entry>
         <oasis:entry colname="col8">RMSE</oasis:entry>
         <oasis:entry colname="col9">Norm.</oasis:entry>
         <oasis:entry colname="col10">CorrCoef</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(%)</oasis:entry>
         <oasis:entry colname="col3">(mg m<inline-formula><mml:math id="M293" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">SD</oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7">(%)</oasis:entry>
         <oasis:entry colname="col8">(mg m<inline-formula><mml:math id="M294" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col9">SD</oasis:entry>
         <oasis:entry colname="col10"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">0–20 m</oasis:entry>
         <oasis:entry colname="col2">42.76</oasis:entry>
         <oasis:entry colname="col3">1.27</oasis:entry>
         <oasis:entry colname="col4">2.14</oasis:entry>
         <oasis:entry colname="col5">0.38</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7">21.97</oasis:entry>
         <oasis:entry colname="col8">1.05</oasis:entry>
         <oasis:entry colname="col9">1.78</oasis:entry>
         <oasis:entry colname="col10">0.39</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">20–40 m</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M295" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">23.96</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.68</oasis:entry>
         <oasis:entry colname="col4">1.25</oasis:entry>
         <oasis:entry colname="col5">0.40</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M296" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">33.37</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8">0.62</oasis:entry>
         <oasis:entry colname="col9">1.06</oasis:entry>
         <oasis:entry colname="col10">0.42</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">40–60 m</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M297" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">62.99</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.49</oasis:entry>
         <oasis:entry colname="col4">0.72</oasis:entry>
         <oasis:entry colname="col5">0.26</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M298" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">68.35</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8">0.48</oasis:entry>
         <oasis:entry colname="col9">0.61</oasis:entry>
         <oasis:entry colname="col10">0.28</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">60–80 m</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M299" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">89.75</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.18</oasis:entry>
         <oasis:entry colname="col4">0.15</oasis:entry>
         <oasis:entry colname="col5">0.44</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M300" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">91.73</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8">0.19</oasis:entry>
         <oasis:entry colname="col9">0.12</oasis:entry>
         <oasis:entry colname="col10">0.45</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e6805"><?xmltex \hack{\newpage}?>The major difference between the two variants of ECOSMO II is that in the case
of the CHL variant, the model carbon : chlorophyll <inline-formula><mml:math id="M301" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> ratio adapts to the light
availability, where abundant light results in a higher ratio (days 140–250; Fig. A1d) at the surface, lower ratio in case of lower light availability either due to seasons or high attenuation due to high chlorophyll <inline-formula><mml:math id="M302" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> at the surface. The latter case can be observed around day 150 (Fig. A1d).</p>
      <p id="d1e6823">A significant difference in the results is that the non-CHL variant simulates higher chlorophyll <inline-formula><mml:math id="M303" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentrations (Fig. A1a–c) assuming a 60 carbon : chlorophyll <inline-formula><mml:math id="M304" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> ratio, which is a representative average ratio for most of the productive period for ECOSMO II(CHL) (Fig. A1d). The difference is more pronounced in the upper 10 m due to a higher carbon : chlorophyll <inline-formula><mml:math id="M305" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> ratio (<inline-formula><mml:math id="M306" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula>) under abundant light. While both simulations are statistically similar in general, especially in the deeper euphotic zone (40–80 m), ECOSMO II(CHL) statistically performs better in the 0–20 and 20–40 m range (Table A1) for almost all statistical quantities. The data that was used to calculate the statistics in Table A1 is visualized in Fig. A2 using a scatter plot of the modelled and observed chlorophyll <inline-formula><mml:math id="M307" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, which confirms the values in Table A1 showing a slightly better performance of ECOSMO II(CHL) near the surface (0–20 m range). The 30 m average point is visually slightly better for ECOSMO II, which probably reflects the better bias in the 20–40 m range (Table A1). While overall the model performance improves, further modifications to either model parameters or formulation should be made for the future iterations of ECOSMO,  as below 40 m the model has not gained a significant improvement suggesting that the chlorophyll <inline-formula><mml:math id="M308" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> dynamics should be improved for low-light conditions.</p>

      <?xmltex \floatpos{t}?><fig id="App1.Ch1.S1.F11" specific-use="star"><?xmltex \currentcnt{A2}?><?xmltex \def\figurename{Figure}?><label>Figure A2</label><caption><p id="d1e6874"><bold>(a)</bold> ECOSMO II and <bold>(b)</bold> ECOSMO II(CHL) 1D model chlorophyll <inline-formula><mml:math id="M309" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (<inline-formula><mml:math id="M310" display="inline"><mml:mrow><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (mg m<inline-formula><mml:math id="M311" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)) is evaluated against in situ data at Station M. Model data was interpolated to co-locate with the in situ data. Small markers depict the individual points and the large markers depict 10 m interval averages. The observation depth is given in colour coding.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f11.png"/>

        </fig>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F12" specific-use="star"><?xmltex \currentcnt{A3}?><?xmltex \def\figurename{Figure}?><label>Figure A3</label><caption><p id="d1e6920">Number of observations for the WOA13 inorganic nutrient time series
for the model regions.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f12.png"/>

        </fig>

</sec>
<sec id="App1.Ch1.S1.SS2">
  <label>A2</label><title>World Ocean Atlas 2013 and Institute of Marine Research (2018) data supplementary figures</title>
      <p id="d1e6937">In this section we provide the supplementary figures for Sects. 4.3 and 5 by presenting the number of observations used for the statistical analyses in WOA2013 dataset for each region and inorganic nutrient (Fig. A3) and annual averages of <inline-formula><mml:math id="M312" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">PO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> molar ratios (Fig. A4), and profile locations for the IMR18 dataset (Fig. A5).</p>

      <?xmltex \floatpos{t}?><fig id="App1.Ch1.S1.F13"><?xmltex \currentcnt{A4}?><?xmltex \def\figurename{Figure}?><label>Figure A4</label><caption><p id="d1e6960">Simulated and WOA2013 inorganic nutrients annual averages
<inline-formula><mml:math id="M313" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">PO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> molar ratios: <bold>(a)</bold> model, <bold>(b)</bold> WOA2013 for 5 and 100 m isodepth.</p></caption>
          <?xmltex \igopts{width=213.395669pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f13.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="App1.Ch1.S1.F14"><?xmltex \currentcnt{A5}?><?xmltex \def\figurename{Figure}?><label>Figure A5</label><caption><p id="d1e6995">Subdivision of model domain in prescribed geographical subdomains
used for model quality assessments. The subdomains are as follows: Norwegian
Sea south (NOR. S.), Norwegian Sea north (NOR. N.), Barents Sea (BARENTS),
Kara Sea (KARA), Laptev Sea (LAPTEV), Bering Strait (BERING STR.),
Arctic-Canada (ARC. CAN.), Arctic-East (ARC. EAST), Arctic-Atlantic (ARC. ATL.), Greenland Sea (GREENLAND) and the Subpolar Gyre (SPG). The points in the oceanic regions denote the profile locations for the observed biogeochemical variables that were used for the statistical analyses. The star depicts the coordinates of the Station M time-series location. While the model domain extends down to the equatorial regions, the figure focuses on the area of interest. Note that the BERING STR. subdomain is within the effective area of the open boundary conditions and thus is relaxed to climatology.</p></caption>
          <?xmltex \igopts{width=199.169291pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/3901/2022/gmd-15-3901-2022-f14.png"/>

        </fig>

</sec>
<sec id="App1.Ch1.S1.SS3">
  <label>A3</label><title>Observational data sources</title>
      <p id="d1e7012">The following web links are to sources of the observational data used in the
evaluation of ECOSMO II(CHL):
<list list-type="order"><list-item>
      <p id="d1e7017">World Ocean Atlas 2013: nitrate, phosphate and silicate –
<uri>https://www.nodc.noaa.gov/OC5/woa13/</uri> (last access: 25 March 2022);
<?xmltex \hack{\newpage}?></p></list-item><list-item>
      <p id="d1e7025">World Ocean Atlas 2018: temperature – <uri>https://www.nodc.noaa.gov/OC5/SELECT/woaselect/woaselect.html</uri> (last access: 25 March 2022);</p></list-item><list-item>
      <p id="d1e7032">Institute of Marine Research (2018) data: nitrate, silicate, phosphate and chlorophyll <inline-formula><mml:math id="M314" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> – <uri>http://www.imr.no/forskning/forskningsdata/infrastruktur/viewdataset.html?dataset_id=104</uri> (last access: 25 March 2022);</p></list-item><list-item>
      <p id="d1e7046">Ocean Colour Climate Change Initiative v5.0: chlorophyll <inline-formula><mml:math id="M315" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> – <uri>https://climate.esa.int/en/projects/ocean-colour/data/</uri> (last access: 25 March 2022).</p></list-item></list></p><?xmltex \hack{\newpage}?>
</sec>
</app>
  </app-group><notes notes-type="codeavailability"><title>Code availability</title>

      <p id="d1e7065">The exact version of the model used to produce the results used in this paper is archived on Zenodo (<ext-link xlink:href="https://doi.org/10.5281/zenodo.6387608" ext-link-type="DOI">10.5281/zenodo.6387608</ext-link>; Lisæter et al., 2021) including the input data and scripts to run the model and produce plots for all the simulations presented in this paper. They are openly available under a Creative Commons Attribution 4.0 International license. The HYCOM version used is 2.2.37, and the ECOSMO II(CHL) code is available in HYCOM_2.2.37/CodeOnly/src_2.2.37/nersc/ECOSMO where m_ECOSM_biochm.F is the master biogeochemical code. The model set-up used here is located under the “model_experiment/expt_09.0/SCRATCH/” directory. After the compilation following the procedure documented in the “Doc” folder, the executable copied to the SCRATCH folder should be able to replicate the model presented here. The different parameters given for each experiment in the paper can be applied to “HYCOM_2.2.37/CodeOnly/src_2.2.37/nersc/ECOSMO/ ECOSMparam1.h”. The model is set to produce daily averaged binary files, but scripts to convert the binary files to netcdf files are included in “MSCPROGS/src”. The model code is written in FORTRAN. Model results provided in the paper are located under “model_output” directory.</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e7074">VÇY and AS designed the experiments and VÇY carried them out. UD is the developer of ECOSMO II and, together with AS, coupled ECOSMO II to HYCOM physics model. VÇY has built the ECOSMO II(CHL) version on ECOSMO II. The physics model set-up for this study was mainly prepared by AS, and the preparation of the biogeochemical set-up, sensitivity analyses and model evaluation were carried out by VÇY. VÇY prepared the paper with contributions from all co-authors.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e7080">The contact author has declared that neither they nor their co-authors have any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d1e7086">Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e7093">Veli Çağlar Yumruktepe and Annette Samuelsen acknowledge the support of CMEMS for the Arctic MFC. Ute Daewel was supported through ZOOMBI (CMEMS 66-SE-CALL2). The computations were performed on the Norwegian Sigma2 infrastructure under the projects NN9481K and NS9481K. Visualization of model results and revision of this paper were also supported by the European Space Agency through the Cryosphere Virtual Laboratory (CVL, grant no. 4000128808/19/I-NS).</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e7098">This research has been supported by the Copernicus Marine Services which is implemented by Mercator Ocean International within the framework of a delegation agreement with the European Union (grant no. 69-CMEMS-MFC-ARC and 66-SE-CALL2). This research has also been supported by the European Space Agency through the Cryosphere Virtual Laboratory (grant no. 4000128808/19/I-NS).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e7104">This paper was edited by Andrew Yool and reviewed by three anonymous referees.</p>
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