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  <front>
    <journal-meta><journal-id journal-id-type="publisher">GMD</journal-id><journal-title-group>
    <journal-title>Geoscientific Model Development</journal-title>
    <abbrev-journal-title abbrev-type="publisher">GMD</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Geosci. Model Dev.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1991-9603</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/gmd-15-2973-2022</article-id><title-group><article-title>The EC-Earth3 Earth system model for the Coupled Model Intercomparison
Project 6</article-title><alt-title>The EC-Earth3 Earth system model for the Coupled Model Intercomparison
Project 6</alt-title>
      </title-group><?xmltex \runningtitle{The EC-Earth3 Earth system model for the Coupled Model Intercomparison
Project 6}?><?xmltex \runningauthor{R. D\"{o}scher et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Döscher</surname><given-names>Ralf</given-names></name>
          <email>ralf.doescher@smhi.se</email>
        <ext-link>https://orcid.org/0000-0003-0174-3693</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Acosta</surname><given-names>Mario</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7054-8168</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Alessandri</surname><given-names>Andrea</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Anthoni</surname><given-names>Peter</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5459-6506</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Arsouze</surname><given-names>Thomas</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Bergman</surname><given-names>Tommi</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6133-2231</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Bernardello</surname><given-names>Raffaele</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-4923-1582</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Boussetta</surname><given-names>Souhail</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-8646-8701</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Caron</surname><given-names>Louis-Philippe</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5221-0147</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Carver</surname><given-names>Glenn</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7582-6497</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Castrillo</surname><given-names>Miguel</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-1826-623X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff7">
          <name><surname>Catalano</surname><given-names>Franco</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-9467-4687</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Cvijanovic</surname><given-names>Ivana</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff8">
          <name><surname>Davini</surname><given-names>Paolo</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3389-7849</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Dekker</surname><given-names>Evelien</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Doblas-Reyes</surname><given-names>Francisco J.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6622-4280</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Docquier</surname><given-names>David</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Echevarria</surname><given-names>Pablo</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Fladrich</surname><given-names>Uwe</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Fuentes-Franco</surname><given-names>Ramon</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3085-0175</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Gröger</surname><given-names>Matthias</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9927-5164</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff9 aff8">
          <name><surname>v. Hardenberg</surname><given-names>Jost</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-5312-8070</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Hieronymus</surname><given-names>Jenny</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Karami</surname><given-names>M. Pasha</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-0390-2889</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff10">
          <name><surname>Keskinen</surname><given-names>Jukka-Pekka</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2365-5950</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Koenigk</surname><given-names>Torben</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2051-743X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff11">
          <name><surname>Makkonen</surname><given-names>Risto</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff12">
          <name><surname>Massonnet</surname><given-names>François</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4697-5781</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff13">
          <name><surname>Ménégoz</surname><given-names>Martin</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7098-9270</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff14">
          <name><surname>Miller</surname><given-names>Paul A.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Moreno-Chamarro</surname><given-names>Eduardo</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-7931-5149</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff14">
          <name><surname>Nieradzik</surname><given-names>Lars</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9562-5235</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>van Noije</surname><given-names>Twan</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-5148-5867</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff15">
          <name><surname>Nolan</surname><given-names>Paul</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-0629-9771</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff11">
          <name><surname>O'Donnell</surname><given-names>Declan</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff11">
          <name><surname>Ollinaho</surname><given-names>Pirkka</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>van den Oord</surname><given-names>Gijs</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-8367-1333</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Ortega</surname><given-names>Pablo</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4135-9621</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Prims</surname><given-names>Oriol Tintó</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3182-3942</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Ramos</surname><given-names>Arthur</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Reerink</surname><given-names>Thomas</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9983-6195</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff16">
          <name><surname>Rousset</surname><given-names>Clement</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Ruprich-Robert</surname><given-names>Yohan</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4008-2026</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Le Sager</surname><given-names>Philippe</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff16">
          <name><surname>Schmith</surname><given-names>Torben</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3442-4381</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff14">
          <name><surname>Schrödner</surname><given-names>Roland</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-1185-6018</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff17">
          <name><surname>Serva</surname><given-names>Federico</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-7118-0817</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Sicardi</surname><given-names>Valentina</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff18">
          <name><surname>Sloth Madsen</surname><given-names>Marianne</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff14">
          <name><surname>Smith</surname><given-names>Benjamin</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff18">
          <name><surname>Tian</surname><given-names>Tian</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-9092-9128</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Tourigny</surname><given-names>Etienne</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-4628-1461</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff10">
          <name><surname>Uotila</surname><given-names>Petteri</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-2939-7561</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff19">
          <name><surname>Vancoppenolle</surname><given-names>Martin</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-7573-8582</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Wang</surname><given-names>Shiyu</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff14">
          <name><surname>Wårlind</surname><given-names>David</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6257-0338</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Willén</surname><given-names>Ulrika</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Wyser</surname><given-names>Klaus</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-9752-3454</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff18">
          <name><surname>Yang</surname><given-names>Shuting</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-0147-2056</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Yepes-Arbós</surname><given-names>Xavier</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-1420-6400</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff20">
          <name><surname>Zhang</surname><given-names>Qiong</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9137-2883</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Swedish Meteorological and Hydrological Institute (SMHI),
Norrköping, 60176, Sweden</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Barcelona Supercomputing Center, Barcelona, 08034, Spain</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Institute of Atmospheric Sciences and Climate, Consiglio Nazionale
delle Ricerche, ISAC-CNR, 40129 Bologna, Italy</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Karlsruhe Institute of Technology (KIT), 82467 Garmisch-Partenkirchen,
Germany</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Royal Netherlands Meteorological Institute (KNMI), De Bilt, 3731, the
Netherlands</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>European Centre for Medium-Range Weather Forecasts (ECMWF), Reading,
RG2-9AX, United Kingdom</institution>
        </aff>
        <aff id="aff7"><label>7</label><institution>Italian National Agency for New Technologies, Energy and Sustainable
Economic Development (ENEA), 00196 Rome,  Italy</institution>
        </aff>
        <aff id="aff8"><label>8</label><institution>Institute of Atmospheric Sciences and Climate, Consiglio Nazionale
delle Ricerche, ISAC-CNR, 10133 Turin, Italy
</institution>
        </aff>
        <aff id="aff9"><label>9</label><institution>Politecnico di Torino, 10129 Turin, Italy</institution>
        </aff>
        <aff id="aff10"><label>10</label><institution>University of Helsinki, Helsinki, 00014, Finland</institution>
        </aff>
        <aff id="aff11"><label>11</label><institution>Finnish Meteorological Institute, FMI, Helsinki, 00560, Finland</institution>
        </aff>
        <aff id="aff12"><label>12</label><institution>Université Catholique de Louvain UCLouvain,
Ottignies-Louvain-la-Neuve, 1348, Belgium</institution>
        </aff>
        <aff id="aff13"><label>13</label><institution>IGE, University of Grenoble, Grenoble, 38400, France</institution>
        </aff>
        <aff id="aff14"><label>14</label><institution>Lund University, Lund, 22100, Sweden</institution>
        </aff>
        <aff id="aff15"><label>15</label><institution>Irish Centre for High End Computing, ICHECK, Dublin, Ireland </institution>
        </aff>
        <aff id="aff16"><label>16</label><institution>University Pierre and Marie Curie (UPMC), Paris, 75005, France</institution>
        </aff>
        <aff id="aff17"><label>17</label><institution>Istituto di Scienze Marine CNR-ISMAR, 30122 Venice, Italy</institution>
        </aff>
        <aff id="aff18"><label>18</label><institution>Danish Meteorological Institute, Copenhagen, 2100, Denmark</institution>
        </aff>
        <aff id="aff19"><label>19</label><institution>Institut Pierre Simon Laplace (IPSL), Paris, 75005, France</institution>
        </aff>
        <aff id="aff20"><label>20</label><institution>Department of Physical Geography, Stockholm University, Stockholm, 106 91, Sweden </institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Ralf Döscher (ralf.doescher@smhi.se)</corresp></author-notes><pub-date><day>8</day><month>April</month><year>2022</year></pub-date>
      
      <volume>15</volume>
      <issue>7</issue>
      <fpage>2973</fpage><lpage>3020</lpage>
      <history>
        <date date-type="received"><day>31</day><month>December</month><year>2020</year></date>
           <date date-type="rev-request"><day>11</day><month>February</month><year>2021</year></date>
           <date date-type="rev-recd"><day>22</day><month>July</month><year>2021</year></date>
           <date date-type="accepted"><day>23</day><month>August</month><year>2021</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2022 Ralf Döscher et al.</copyright-statement>
        <copyright-year>2022</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022.html">This article is available from https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022.html</self-uri><self-uri xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022.pdf">The full text article is available as a PDF file from https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d1e765">The Earth system model EC-Earth3 for contributions to
CMIP6 is documented here, with its flexible coupling framework, major model
configurations, a methodology for ensuring the simulations are comparable
across different high-performance computing (HPC) systems, and with the physical performance of base
configurations over the historical period. The variety of possible
configurations and sub-models reflects the broad interests in the EC-Earth
community. EC-Earth3 key performance metrics demonstrate physical behavior
and biases well within the frame known from recent CMIP models. With
improved physical and dynamic features, new Earth system model (ESM) components, community tools,
and largely improved physical performance compared to the CMIP5 version,
EC-Earth3 represents a clear step forward for the only European community
ESM. We demonstrate here that EC-Earth3 is suited for a range of tasks in
CMIP6 and beyond.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e777">The latest challenges in climate research have evolved to include
biophysical and biogeochemical processes (WCRP Strategic Plan, 2019–2028, <uri>https://www.wcrp-climate.org/wcrp-sp</uri>, last access: 18 March 2022)
contributing to the exchange of energy, mass, aerosols, trace and greenhouse
gases, and nutrients between the atmosphere, land, and ocean, allowing the
description of various feedback processes. This challenge resulted in a need
for the next generation of climate models – namely, the Earth system models
(ESMs); see, e.g., Flato (2011).</p>
      <p id="d1e783">The Paris Climate Accord is calling for limiting climate change “well below
2 <inline-formula><mml:math id="M1" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and to pursue efforts to limit the increase to 1.5 <inline-formula><mml:math id="M2" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C”. ESMs represent our most relevant tools available for exploring the
emission pathways necessary for achieving this goal (Kawamiya et al., 2020),
as well as for understanding the consequences of not making this target. The
Paris Agreement requires firm measures of mitigation, including carbon
dioxide removal. Given the complexity of the climate system, alternative
emission pathways towards this goal can be carefully explored only with
Earth system models (ESMs), which describe the most relevant feedback
mechanisms and provide methods for assessments of uncertainty. ESMs are the
primary source of information for understanding the Earth's climate
feedbacks, for attributing changes to specific drivers, for future climate
projections and predictions, and for the development of mitigation policies.</p>
      <p id="d1e804">While the exact definition of ESM varies, in general, it refers to a complex
model that besides the classical climate model core (consisting of physical
models of the atmosphere, sea ice, ocean, and land) combines additional
optional components covering biophysical and biogeochemical processes as well as
more sophisticated treatment of aerosols. A flexible coupling framework
facilitates a range of ESM configurations with or without certain model
components or processes. Given the important role of ESMs, these models need
to be developed together with use cases for science, climate services, and
decision-making that control the priorities of development.</p>
      <p id="d1e807">This article describes EC-Earth3, an Earth system model with the flexibility
of different configurations that allow users to consider (or exclude)
various climate feedbacks and processes. It has been developed
collaboratively by the European research consortium EC-Earth to provide a
community of European research institutes and universities with an
integrated state-of-the-art tool for Earth system studies. While its
development goals were largely motivated by the Coupled Model
Intercomparison Project phase 6 (CMIP6; Eyring et al., 2016), its suite of
ESM configurations allows exploration of a broad range of climate science
questions.</p>
      <p id="d1e811">The predecessor system EC-Earth2 (Hazeleger et al., 2012) approached the
concept of “seamless prediction” to forge models for weather forecasting
and climate change studies into a joint system. EC-Earth version 2.2 was
based on an adapted version of the atmosphere model IFS 31r1, the Integrated
Forecasting System of the European Centre for Medium-Range Weather Forecasts
(ECMWF), as used in their seasonal prediction system 3. In addition, a
configuration including the atmospheric composition model TM5 was developed
(van Noije et al., 2014) and released as EC-Earth version 2.4. EC-Earth2 has
been used for simulations under CMIP5 and in a range of climate studies
(e.g., Koenigk et al., 2013; Seneviratne et al., 2013).</p>
      <p id="d1e814">The current version EC-Earth3 for CMIP6 still leans on the original idea of
a climate model system based on the seasonal prediction system of ECMWF.
Development started in 2012 by redesigning the software infrastructure and
updating the atmosphere model to IFS 36r4, corresponding to the ECMWF
seasonal prediction system 4. Since then, various updates, improvements, and
forcings have been implemented; the model has been tuned for several
intermediate versions and finally for the CMIP6 version, EC-Earth3.</p>
      <p id="d1e817">Adaptation of IFS for EC-Earth follows up on the strategy of mutual benefits
between short- and medium-range weather prediction on the one hand and longer-timescale climate prediction and projection on the other. While short-term
processes and feedbacks are expected to be covered well in the seasonal
prediction system, longer-term conservation and trends are the focus of
climate model development. During the development process, EC-Earth has been
able to feed back valuable information to ECMWF. Examples are a stochastic
physics tendency conservation fix for humidity and energy (Leutbecher et al., 2017) forcing (tropospheric and stratospheric aerosol, ozone) and an
implementation of aerosol forcing as used in CMIP6 (“MACv2-SP”).</p>
      <p id="d1e820">The EC-Earth ESM exists in different coupled configurations that reflect a
variety of study options and science interests. The system comes with a pure
physical core configuration in the form of a global climate model (GCM) with
a range of options: a GCM with prescribed or interactively coupled dynamic
vegetation, a dynamical Greenland Ice Sheet, and a closed carbon cycle.
Also, a configuration with interactive aerosols and atmospheric chemistry is
available, and GCM configurations have been established in different
resolutions for the atmosphere and ocean.</p>
      <p id="d1e823">As a community model, EC-Earth3 is run on several different high-performance computing (HPC) platforms.
While expecting the same simulated climate on each machine, we cannot expect
binary identical results. To ensure consistency between different machines,
a test protocol and statistical test procedure have been designed.</p>
      <p id="d1e826">This paper describes the EC-Earth3 model concept and provides an overview
of its component models and the range of available coupled configurations.
Specific configurations will be described in more detail in forthcoming
papers. The model's physical performance is illustrated based on the core
GCM configurations, with a focus on results from historical simulations
performed under the CMIP6 protocol. The EC-Earth consortium consists of 27
partners in 10 European countries.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Configurations</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>The model architecture and coupling framework</title>
      <p id="d1e844">EC-Earth is a modular Earth system model (ESM) that is collaboratively
developed by the European consortium with the same name. The current
generation of the model, EC-Earth3, was developed after CMIP5, and
version 3.3 is used for CMIP6 experiments.</p>
      <p id="d1e847">EC-Earth3 comprises model components for various physical domains and system
components describing atmosphere, ocean, sea ice, land surface, dynamic
vegetation, atmospheric composition, ocean biogeochemistry, and the Greenland
Ice Sheet. The component models are described in Sect. 3. The atmosphere
and land domains are covered by ECMWF's IFS cycle 36r4 (based on IFS system
4,
<uri>https://www.ecmwf.int/sites/default/files/elibrary/2011/11209-new-ecmwf-seasonal-forecast-system-system-4.pdf</uri>, last access: 18 March 2022),
which is supplemented with a coupling interface to allow boundary data
exchange with other components (ocean, dynamic vegetation, aerosols, and
atmospheric chemistry). The NEMO3.6 (Madec and the NEMO team, 2008; Madec et al., 2015)
and LIM3 (Vancoppenolle et al., 2009; Rousset et al., 2015) models are the
ocean and sea ice components, respectively. Biogeochemical processes in the
ocean are simulated by the PISCES model (Aumont et al., 2015). Both LIM3 and
PISCES are code-wise integrated in NEMO. Dynamical vegetation, land use, and
terrestrial biogeochemistry are provided by LPJ-GUESS (Smith et al., 2014;
Lindeskog et al., 2013). Aerosols and chemical processes in the atmosphere
are described by TM5 (van Noije et al., 2014). The ice sheet model PISM
(Bueler and Brown, 2009; Winkelmann et al., 2011; The PISM Team, 2019)
is optionally utilized to model the Greenland Ice Sheet.</p>
      <p id="d1e853">An overview of five ESM model configurations is given in this section.
Descriptions are schematic, and more detailed specifications will be given in
forthcoming publications. Table 1 lists the configurations and their
composition, while Table 2 shows the commonly used resolutions for CMIP6.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e860">Configurations of the EC-Earth model for CMIP6; the name of the configuration is used as source_id in the CMIP6 context.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="2cm"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="2cm"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="2cm"/>
     <oasis:colspec colnum="5" colname="col5" align="justify" colwidth="2cm"/>
     <oasis:colspec colnum="6" colname="col6" align="justify" colwidth="2cm"/>
     <oasis:colspec colnum="7" colname="col7" align="justify" colwidth="1.8cm"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Configuration</oasis:entry>
         <oasis:entry colname="col2">Atmosphere <inline-formula><mml:math id="M3" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> land<?xmltex \hack{\hfill\break}?>surface</oasis:entry>
         <oasis:entry colname="col3">Ocean <inline-formula><mml:math id="M4" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> sea <?xmltex \hack{\hfill\break}?>ice</oasis:entry>
         <oasis:entry colname="col4">Dynamic <?xmltex \hack{\hfill\break}?>vegetation</oasis:entry>
         <oasis:entry colname="col5">Atmospheric composition</oasis:entry>
         <oasis:entry colname="col6">Ocean biogeochemistry</oasis:entry>
         <oasis:entry colname="col7">Greenland Ice Sheet</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">IFS 36r4 <inline-formula><mml:math id="M5" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HTESSEL</oasis:entry>
         <oasis:entry colname="col3">NEMO3.6 <inline-formula><mml:math id="M6" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> LIM3</oasis:entry>
         <oasis:entry colname="col4">LPJ-GUESS</oasis:entry>
         <oasis:entry colname="col5">TM5</oasis:entry>
         <oasis:entry colname="col6">PISCES</oasis:entry>
         <oasis:entry colname="col7">PISM</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">EC-Earth3</oasis:entry>
         <oasis:entry colname="col2">x</oasis:entry>
         <oasis:entry colname="col3">x</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">EC-Earth3-Veg</oasis:entry>
         <oasis:entry colname="col2">x</oasis:entry>
         <oasis:entry colname="col3">x</oasis:entry>
         <oasis:entry colname="col4">x</oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">EC-Earth3-AerChem</oasis:entry>
         <oasis:entry colname="col2">x</oasis:entry>
         <oasis:entry colname="col3">x</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">x</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">EC-Earth3-CC</oasis:entry>
         <oasis:entry colname="col2">x</oasis:entry>
         <oasis:entry colname="col3">x</oasis:entry>
         <oasis:entry colname="col4">x</oasis:entry>
         <oasis:entry colname="col5">x (CO<inline-formula><mml:math id="M7" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> only)</oasis:entry>
         <oasis:entry colname="col6">x (CO<inline-formula><mml:math id="M8" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> fluxes and mixing ratio only)</oasis:entry>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">EC-Earth3-GrIS</oasis:entry>
         <oasis:entry colname="col2">x</oasis:entry>
         <oasis:entry colname="col3">x</oasis:entry>
         <oasis:entry colname="col4">x</oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e1106">Commonly used resolutions for CMIP6. The suffixes LR and HR are added to the name of the model configuration where applicable (e.g., EC-Earth3-Veg-LR).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="7cm"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="3cm"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Resolution atmosphere</oasis:entry>
         <oasis:entry colname="col3">Resolution ocean</oasis:entry>
         <oasis:entry colname="col4">Time step</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Standard resolution</oasis:entry>
         <oasis:entry colname="col2">T255L91 (<inline-formula><mml:math id="M9" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 80 km)</oasis:entry>
         <oasis:entry colname="col3">ORCA1L75 (1<inline-formula><mml:math id="M10" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">2700 s (atm) <?xmltex \hack{\hfill\break}?>2700 s (oce) <?xmltex \hack{\hfill\break}?>2700 s (coupling)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Low resolution (EC-Earth3-LR and EC-Earth3-Veg-LR)</oasis:entry>
         <oasis:entry colname="col2">T159L62 (<inline-formula><mml:math id="M11" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 125 km)</oasis:entry>
         <oasis:entry colname="col3">ORCA1L75 (1<inline-formula><mml:math id="M12" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">3600 s (atm) <?xmltex \hack{\hfill\break}?>2700 s (oce) <?xmltex \hack{\hfill\break}?>10 800 s (coupling)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">High resolution (EC-Earth3P-HR and EC-Earth3-HR)</oasis:entry>
         <oasis:entry colname="col2">T511L91 (<inline-formula><mml:math id="M13" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 40 km)</oasis:entry>
         <oasis:entry colname="col3">ORCA025L75 (0.25<inline-formula><mml:math id="M14" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">900 s (atm) <?xmltex \hack{\hfill\break}?>900 s (oce) <?xmltex \hack{\hfill\break}?>2700 s (coupling)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e1248">Most of the model components are coupled through the OASIS3-MCT coupling
library (Craig et al., 2017), while some software components include more
than one model component, e.g., the sea ice model being a part of the ocean
model. A new coupling interface has been developed and implemented to allow
a flexible exchange between the model components (see Sect. 3). The
OASIS3-MCT coupler provides a technical means of exchanging (sending and
receiving) two- and three-dimensional coupling fields between different
model components on their different grids. Of the above-named model
components, NEMO, LIM3, and PISCES exchange data directly via shared data
structures. Thus, EC-Earth3 is implemented following a multi-executable MPMD
(multiple programs, multiple data) approach. The model components run
concurrently, and a message-passing interface (MPI) is used for parallelization
within the components. A potential configuration of all components is
illustrated in Fig. 1, which also shows coupling links and frequencies.
Note that a configuration including all possible components is not
implemented in practice.</p><?xmltex \setfigures?><?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Figure}?><label>Figure 1</label><caption><p id="d1e1253">Coupling links and typical frequencies at standard resolution
between all components that potentially can be coupled. Existing
configurations include subsets of component models and associated
couplings.</p></caption>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f01.png"/>

        </fig>

      <p id="d1e1262">In order to manage different configurations at both build time and runtime,
EC-Earth3 includes tools to store and retrieve configuration parameters for
different model configurations, computational platforms, and experiment
types. This allows consistent control of the build and run environments and
improves reproducibility across platforms and use cases.</p>
      <p id="d1e1266">Initial and forcing data (see Table 13), in the form of data files, are
provided centrally for the EC-Earth community, and the data are versioned and
check-summed for reproducibility.</p>
      <p id="d1e1269">For EC-Earth3 a tool was developed to convert the native model output to
CF-compliant (“Climate and Forecast” standard) NetCDF format (i.e.,
Climate Model Output Rewriter, CMOR), thus fulfilling the CMIP6 Data
Requests for the model intercomparison projects (MIPs) that the community is contributing to (van den Oord et al., 2022, 2017, <uri>https://github.com/EC-Earth/ece2cmor3/</uri> (last access: 18 March 2022),
<ext-link xlink:href="https://doi.org/10.5281/zenodo.1051094" ext-link-type="DOI">10.5281/zenodo.1051094</ext-link>, van den Oord, 2017).</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Basic configurations EC-Earth3 and EC-Earth3-Veg</title>
      <p id="d1e1286">EC-Earth3 is the standard configuration consisting of the atmosphere model
IFS (Sect. 3.1) including the land surface module HTESSEL (Sect. 3.2)
and the ocean model NEMO3.6 with the sea ice module LIM3 (Sect. 3.5).
Coupling variables are communicated between the different component models
(see Sect. 3) via the OASIS3-MCT coupler. The physical interfaces are
defined by specifying the variables exchanged and the algorithms used.</p>
      <p id="d1e1289">At the atmosphere–ocean interface, we follow the principle that the ocean
provides state variables and the atmosphere sends fluxes (Table 3). Flux
formulations correspond to the documentation of IFS CY36R1, Sect. 3, at
<uri>https://www.ecmwf.int/en/publications/ifs-documentation</uri> (last access: 18 March 2022).
Atmosphere fluxes are remapped onto the ocean grid by a nearest-neighbor
distance-based Gauss-weighted interpolation. The energy (solar and non-solar
radiation) and mass (evaporation and precipitation) fluxes are treated with
a conservation post-processing method during coupling, in which the residual
(target minus source grid integrals) is distributed over the target grid
proportional to the original interpolated value. This does not constitute a
locally conservative method, but it does conserve mass and energy of the
coupling fields. The “sensitivity of non-solar heat flux” in Table 3
refers to the sensitivity with respect to sea ice surface temperature. The
variable is used by the sea ice model to distribute the non-solar heat
fluxes over different ice categories.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><?xmltex \currentcnt{3}?><label>Table 3</label><caption><p id="d1e1298">Variables and fluxes exchanged at the ocean–atmosphere interfaces.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Atmosphere <inline-formula><mml:math id="M15" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Ocean</oasis:entry>
         <oasis:entry colname="col2">Ocean <inline-formula><mml:math id="M16" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Atmosphere</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Momentum flux</oasis:entry>
         <oasis:entry colname="col2">Sea surface temperature</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Heat flux solar <inline-formula><mml:math id="M17" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> non-solar</oasis:entry>
         <oasis:entry colname="col2">Sea ice concentration</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Evaporation</oasis:entry>
         <oasis:entry colname="col2">Sea ice temperature</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Precipitation liquid <inline-formula><mml:math id="M18" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> solid</oasis:entry>
         <oasis:entry colname="col2">Sea ice albedo</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sensitivity of non-solar heat flux over ice</oasis:entry>
         <oasis:entry colname="col2">Sea ice thickness (not used)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Snow thickness on sea ice</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4"><?xmltex \currentcnt{4}?><label>Table 4</label><caption><p id="d1e1411">Variables and fluxes provided to the ocean via the runoff mapper.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Atmosphere <inline-formula><mml:math id="M19" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Runoff mapper</oasis:entry>
         <oasis:entry colname="col2">Runoff mapper <inline-formula><mml:math id="M20" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Ocean</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Runoff</oasis:entry>
         <oasis:entry colname="col2">Runoff</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Excess snow</oasis:entry>
         <oasis:entry colname="col2">Calving</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e1470">The freshwater runoff from land to ocean is derived from a runoff mapper
(Table 4). It uses OASIS3-MCT to interpolate local runoff and ice-shelf
calving (from Greenland and Antarctica) to the ocean. The runoff and calving
received from the atmosphere and from the surface model HTESSEL are
interpolated onto 66 hydrological drainage basins, remapped onto an
intermediate grid by the same method and same post-processing as described
above for the mass flux. The resulting runoff to the ocean is evenly and
instantaneously distributed along several ocean coastal points connected to
each hydrological basin in the vicinity of the major river outlet. The
runoff is even distributed vertically. The distribution depths are taken
(read in from a file) from an ocean-only simulation using a feature of NEMO
to save these depths when the NEMO input parameter ln_rnf_depth_ini is set to true in the namelist.
For a detailed description of the method we refer to the NEMO documentation
(<uri>https://www.nemo-ocean.eu/doc/node53.html</uri>, last access: 18 March 2022).</p>
      <p id="d1e1476">In order to avoid a significant long-term sea surface height reduction in
coupled model runs due to a net precipitation–evaporation (<inline-formula><mml:math id="M21" display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula>–<inline-formula><mml:math id="M22" display="inline"><mml:mi>E</mml:mi></mml:math></inline-formula>) imbalance
in the EC-Earth3 atmosphere of about <inline-formula><mml:math id="M23" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.016 <inline-formula><mml:math id="M24" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">mm</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">d</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> in the historical period,
the coupled model implements a runoff flux corrector, which amplifies river
runoff by 7.95 % in order to compensate for this effect. The compensating
flux by the corrector is calculated separately for different resolutions,
since different resolutions give different results. The effects are also
described in the section “Low-resolution configuration”. Correctors are
derived for observed climate and applied throughout future scenario periods
without change. Comparing the <inline-formula><mml:math id="M25" display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula>–<inline-formula><mml:math id="M26" display="inline"><mml:mi>E</mml:mi></mml:math></inline-formula> imbalance in CMIP6 historical runs with
4<inline-formula><mml:math id="M27" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula>CO<inline-formula><mml:math id="M28" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> experiments, we find that the <inline-formula><mml:math id="M29" display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula>–<inline-formula><mml:math id="M30" display="inline"><mml:mi>E</mml:mi></mml:math></inline-formula> imbalance does not change
significantly.</p>
      <p id="d1e1562">EC-Earth3-Veg is a configuration extending EC-Earth3 by the interactively
coupled second-generation dynamic global vegetation model LPJ-GUESS, which
is described together with the coupling principles in Sect. 3.3. Here we
provide the variables exchanged through the coupler.</p>
      <p id="d1e1565">The coupling interface between the atmosphere and vegetation (Table 5) is
characterized by the atmospheric model sending the driving variables, as
well as selected biogeophysical soil parameters computed within HTESSEL.
LPJ-GUESS returns vegetation parameters for both high and low vegetation
categories needed for computing surface energy and water exchange in
HTESSEL. This ensures that EC-Earth makes best use of both the advanced
biophysics in the HTESSEL land surface model and the state-of-the-art
vegetation dynamics, land use functionality, and terrestrial biogeochemistry
(carbon and nitrogen) in LPJ-GUESS. Since HTESSEL and LPJ-GUESS have very
different soil water schemes (LPJ-GUESS updates soil moisture separately in
each patch and stand type for each grid cell – see Sect. 3.3, whereas
HTESSEL simulates soil moisture per grid cell), the water cycle is
discontinuous and each model operates its own water cycle. The water cycle
of LPJ-GUESS is thus loosely coupled to the rest of EC-Earth by means of the
driving variables sent by HTESSEL/IFS (Boysen et al., 2021). However, the
conservation of moisture in the climate system is not affected by coupling
to LPJ-GUESS.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T5" specific-use="star"><?xmltex \currentcnt{5}?><label>Table 5</label><caption><p id="d1e1572">Variables exchanged between the atmosphere and the vegetation model, with a coupling frequency of 1 d (in standard and low resolution).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Atmosphere <inline-formula><mml:math id="M31" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Vegetation</oasis:entry>
         <oasis:entry colname="col2">Vegetation <inline-formula><mml:math id="M32" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Atmosphere</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">2 m temperature</oasis:entry>
         <oasis:entry colname="col2">Dominant vegetation type low <inline-formula><mml:math id="M33" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> high</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Precipitation</oasis:entry>
         <oasis:entry colname="col2">Leaf area index low <inline-formula><mml:math id="M34" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> high</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Soil temperature (four layers)</oasis:entry>
         <oasis:entry colname="col2">Vegetation cover low <inline-formula><mml:math id="M35" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> high</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Shortwave radiation</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Longwave radiation</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e1677">The land mask for the atmosphere is binary and is derived from GTOPO30 (see
Sect. 11.2 and 11.4 in the IFS documentation (<uri>https://www.ecmwf.int/en/publications/ifs-documentation</uri>, last access: 18 March 2022). The ocean mask
is binary as well, and a remapping of coupling fields between the atmosphere and
ocean grid is carried out by the coupler OASIS_MCT.</p>
<sec id="Ch1.S2.SS2.SSS1">
  <label>2.2.1</label><title>Atmospheric tuning of EC-Earth3 and EC-Earth3-Veg</title>
      <p id="d1e1690">The atmospheric component of EC-Earth has been tuned with the goal of
achieving a reasonably small radiative imbalance at the top of the
atmosphere (TOA) at standard resolution (T255L91 – to which we refer in the
following) in present-day atmosphere stand-alone (AMIP) runs using the
CERES_EBAF_Ed4.0 dataset as a reference (Loeb
et al., 2018). In particular, the goal was to minimize the mean weighted
absolute error in the global means of the net radiative flux at the surface,
the TOA longwave flux, longwave cloud forcing, and shortwave cloud forcing,
with the first two fluxes considered the most important. The net radiative flux
at the surface included the latent heat contribution associated with
snowfall, which is not included in the latent heat flux stored by IFS. A
series of convective and microphysical atmospheric tuning parameters was
identified that are listed in Table 6. Similar parameters have also been commonly used
for the tuning of other climate models (e.g., Mauritsen et al., 2012). An
additional critical radius for the autoconversion process of liquid cloud
droplets, added in EC-Earth3, was considered for tuning (see Rotstayn, 2000,
for a discussion on the use of such parameters for model tuning). Changes in
the tuning parameters have been adopted to avoid values too different from the
original IFS CY36R4 values. In order to proceed with tuning, the sensitivity
of the model radiative fluxes to changes in these parameters was determined
through a series of short (6 years) AMIP runs for present-day conditions.
The resulting linear sensitivities considerably accelerate the tuning
process and reduce the number of simulations needed, allowing for the construction of a
linear “tuning simulator” used to predict the impact of different
combinations of tuning parameter changes on the target radiative fluxes and
the determination of combinations providing an optimal score. An iterative process
was followed, alternating the construction of new sets of tuning parameters
using the known sensitivities, AMIP tuning runs for present-day conditions
(20 years, from 1990 to 2010), and the following construction of a new set of
tuning parameters to correct the residual biases, allowing for rapid convergence
to a desired radiative balance. During this process model biases in
other fields were monitored using a Reichler and Kim (2008) metric.
Following a suggestion by ECMWF, we reintroduced a condensation
limiter for clouds in the code, which had been removed in CY36R4 but then reintroduced
in later cycles starting from CY37R2. Apart from improving the upper-tropospheric distribution of humidity in IFS, this change has an important
impact on radiative fluxes (more than <inline-formula><mml:math id="M36" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>1.6 W m<inline-formula><mml:math id="M37" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> in net flux at TOA),
making it a useful tool for tuning the global radiative balance. The
atmospheric tuning process showed that energy conservation in IFS is
severely dependent on the time step used. For example, at standard resolution,
reducing the time step from 2700 to 900 s changes net surface
fluxes by <inline-formula><mml:math id="M38" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2 W m<inline-formula><mml:math id="M39" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>, mainly due to an increase in low clouds, possibly
due to resolution-dependent parameterizations. This issue has been improved
in later operational versions at ECMWF. In final model configurations
time steps ranging from 900 s (high resolution) to 3600 s (low resolution)
have been used; see Table 2.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T6" specific-use="star"><?xmltex \currentcnt{6}?><label>Table 6</label><caption><p id="d1e1728">Atmospheric tuning parameters changed in EC-Earth compared to IFS CY36R4. The table reports the new values adopted for T255L91 EC-Earth3 and EC-Earth3-Veg tuning.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="10cm"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">IFS parameter name</oasis:entry>
         <oasis:entry colname="col2">Description</oasis:entry>
         <oasis:entry colname="col3">EC-Earth3</oasis:entry>
         <oasis:entry colname="col4">IFS CY36R4</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">RPRCON</oasis:entry>
         <oasis:entry colname="col2">Rate of conversion of cloud water to rain</oasis:entry>
         <oasis:entry colname="col3">1.34 <inline-formula><mml:math id="M40" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M41" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">1.4 <inline-formula><mml:math id="M42" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M43" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">ENTRORG</oasis:entry>
         <oasis:entry colname="col2">Entrainment in deep convection</oasis:entry>
         <oasis:entry colname="col3">1.7 <inline-formula><mml:math id="M44" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M45" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">1.8 <inline-formula><mml:math id="M46" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M47" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">RVICE</oasis:entry>
         <oasis:entry colname="col2">Fall speed of ice particles</oasis:entry>
         <oasis:entry colname="col3">0.137</oasis:entry>
         <oasis:entry colname="col4">0.15</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">RLCRITSNOW</oasis:entry>
         <oasis:entry colname="col2">Critical autoconversion threshold for snow in large-scale precipitation</oasis:entry>
         <oasis:entry colname="col3">4.2 <inline-formula><mml:math id="M48" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M49" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">5.0 <inline-formula><mml:math id="M50" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M51" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">RSNOWLIN2</oasis:entry>
         <oasis:entry colname="col2">Constant governing of the temperature dependence of the autoconversion of ice crystals to snow in large-scale precipitation</oasis:entry>
         <oasis:entry colname="col3">0.035</oasis:entry>
         <oasis:entry colname="col4">0.025</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">ENTRDD</oasis:entry>
         <oasis:entry colname="col2">Average entrainment rate for downdrafts</oasis:entry>
         <oasis:entry colname="col3">3.0 <inline-formula><mml:math id="M52" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M53" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">2.0 <inline-formula><mml:math id="M54" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M55" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">RMFDEPS</oasis:entry>
         <oasis:entry colname="col2">Fractional mass flux for downdrafts</oasis:entry>
         <oasis:entry colname="col3">0.3</oasis:entry>
         <oasis:entry colname="col4">0.35</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">RCLDIFF</oasis:entry>
         <oasis:entry colname="col2">Mixing coefficient for turbulence, controls cloud cover</oasis:entry>
         <oasis:entry colname="col3">3.6 <inline-formula><mml:math id="M56" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M57" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">3.0 <inline-formula><mml:math id="M58" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M59" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">RLCRIT_UPHYS</oasis:entry>
         <oasis:entry colname="col2">Critical droplet radius for autoconversion in large-scale precipitation</oasis:entry>
         <oasis:entry colname="col3">0.875 <inline-formula><mml:math id="M60" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M61" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">0.93 <inline-formula><mml:math id="M62" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M63" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e2118">A similar tuning procedure was also used to find alternative tuning parameter
sets for other configurations (EC-Earth3-AerChem, EC-Earth3-LR, and
EC-Earth3-Veg-LR). The atmospheric tuning for EC-Earth3 and EC-Earth3-Veg is
the same, as is the case for EC-Earth3-LR and EC-Earth3-Veg-LR. This is
because the vegetation fields used for EC-Earth3 were derived from dynamic
vegetation model runs. Therefore, there are only very small differences
between the two configurations (with and without dynamic vegetation) for
each resolution in terms of the impact of vegetation on the global energy
balance.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS2">
  <label>2.2.2</label><title>Coupled tuning of EC-Earth3 and EC-Earth3-Veg</title>
      <p id="d1e2129">In parallel to forced ocean tuning experiments, the tuned atmosphere was
used in coupled present-day experiments researching optimal ocean parameters
that allow for a realistic ocean circulation. See Sect. 3.5 for details on
some of the changes developed in this phase.</p>
      <p id="d1e2132">Tuning the final coupled model was aimed primarily at obtaining a realistic
global climate at equilibrium in CMIP6 pre-industrial experiments, focusing
in particular on the sea ice distribution and extent, the near-surface air
temperature distribution, atmospheric variability, the sea surface
temperature (SST) distribution (in particular the Southern Ocean temperature
bias), and ocean transport due to the Atlantic Meridional Overturning
Circulation (AMOC), while at the same time reaching a realistic average
global temperature at equilibrium (286.7  to 286.9 K following IPCC; Hoegh-Guldberg et al., 2018;
Hawkins et al., 2017; Brohan et al., 2006). The goal was to maintain the same
atmospheric tuning as much as possible and only modify the ocean and
sea ice parameters. A common set of tuning parameters suitable for both
EC-Earth3 and EC-Earth3-Veg experiments was sought. To this end we performed
both a range of pre-industrial simulations and, for comparison,
corresponding present-day simulations (using fixed 1990 forcing fields and
compared to 2010 observations). Gregory plots (Gregory et al., 2004) were
used to compare different coupled experiments, to anticipate their
approximate equilibrium temperatures even when only partial results were
available, and to derive suggested corrections to the global net radiative
forcing. The main change which was adopted during this stage was an improved
pre-industrial aerosol climatology produced with a different calculation of
the sea spray source, characterized by a stronger dependence on surface wind
speed (reverting from the formulation of Salisbury et al., 2013, to that of
Monahan et al., 1986) and by a dependence on sea surface temperature,
following Salter et al. (2015). These changes increased sea spray production
over the Southern Ocean and helped to reduce the Southern Ocean SST bias.
Details about the revised parameterization are given by van Noije et al. (2021). Finally, a further minor change was a small reduction of thermal
conductivity of snow in LIM3 (rn_cdsn <inline-formula><mml:math id="M64" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.27).</p>
      <p id="d1e2142">An interesting observation for pre-industrial equilibrium simulations is
that at equilibrium we expect radiative balance at TOA and at the surface on
average, but we have to take into account two additional effects: (1) while
NEMO takes into account the temperature of incoming and outgoing mass fluxes
(rainfall, snowfall, evaporation, and runoff fluxes) to represent dilution
effects, IFS does not account for the heat content of the moisture field and
of precipitation, leading to a missing closure of the global heat budget,
corresponding to a heat sink in the ocean. (2) NEMO includes a representation
of geothermal energy sources. Estimating the total heat imbalance in the
ocean by comparing the ocean heating rate of increase with the net flux at the surface
in a pre-industrial experiment leads to a total estimate of about <inline-formula><mml:math id="M65" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.2 W m<inline-formula><mml:math id="M66" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> (as a global average). This energy sink compensates to a large
extent for internal energy production observed in IFS (as the difference between
the net TOA and net surface radiative fluxes) of about 0.25 W m<inline-formula><mml:math id="M67" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>,
explaining the TOA net flux close to 0 of EC-Earth3 in pre-industrial
experiments.</p>
      <p id="d1e2170">The spin-up of the coupled model prior to the final tuning was a continuous
process during the years of development. Long runs were started as soon as a
promising candidate version was available. After updating tuning parameters
new runs were continued from the end of the previous run, assuming the
changes to the model have only an incremental effect. This
restart–stop–evaluation cycle was repeated before a final spun-up version
was available that allowed for the start of the piControl experiment. The entire
length of all simulations is 1100 years, with the last chunk – done with the
same model configuration as the CMIP6 experiments – stretching over 250
years.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS3">
  <label>2.2.3</label><title>Low-resolution configurations</title>
      <p id="d1e2181">EC-Earth3-Veg-LR is a configuration with interactive vegetation (using
LPJ-GUESS) feedback at low resolution (T159 for IFS and 1<inline-formula><mml:math id="M68" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> for
ORCA/NEMO). This configuration is applied in the Paleoclimate Modelling
Intercomparison Project (PMIP; Kageyama et al., 2018). The major aim of PMIP
is to understand the response of the climate system to different climate
forcings and feedbacks in the last millennium and in earlier periods. This
requires substantial computational resources for multiple multi-centennial
simulations. EC-Earth3-Veg-LR makes this possible with reduced resolution.
In addition to resolution differences, new physical parameterizations are
also included, and tuning parameters are further modified following the same
strategy described in the previous paragraph.</p>
      <p id="d1e2193">Compared to the corresponding configuration with the standard resolution
(EC-Earth3-Veg), additional parameter adjustments are introduced to allow
for paleoclimate simulations. The adjustments mainly include two parts. Most
importantly, orbital forcing parameters are made variable in time. In other
configurations used for centennial-scale simulations, these parameters are
treated as constants representing present-day climate. That approximation
does not hold for multi-centennial to millennial timescales. The new
variable calculation for the orbital parameters is taken and modified from
CAM3.0 (2004) using the method of Berger (1978). The annual and diurnal
cycles of solar insolation are calculated with a repeatable solar year of
365 d and with a mean solar day of exactly 24 h, respectively. This
adjusted formulation facilitates paleoclimate simulations for any time
within 10<inline-formula><mml:math id="M69" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:math></inline-formula> years of 1950 CE. A more detailed description of the
implemented variable orbital parameters is provided in Sect. 3.1.</p>
      <p id="d1e2205">Another adjustment is related to the description of glaciers and the Greenland
Ice Sheet. In the standard-resolution configuration EC-Earth3-Veg, the
physics of land ice are not accounted for. This is not appropriate for
paleoclimate simulations. Therefore, a land ice physics package is
implemented describing surface physics and time-varying snow albedo over
land ice (except for Antarctica) without including a dynamic ice sheet
model. More details are provided in the description of EC-Earth3-GrIS below
in Sect. 2.6.</p>
      <p id="d1e2208">Due to the revised parameterizations and reduced resolution (including the
different time step), key quantities and model biases are different from the
standard configuration EC-Earth3-Veg. Therefore, the EC-Earth3-Veg-LR
configuration requires a separate tuning. The difference between net TOA and
net surface radiative fluxes is almost independent of the tuning and only
depends on the resolution. In the standard resolution, the difference is of
the order of <inline-formula><mml:math id="M70" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.25 W m<inline-formula><mml:math id="M71" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>, while the difference increases to about 0.3 W m<inline-formula><mml:math id="M72" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> for the low resolution.</p>
      <p id="d1e2237">Rather than tuning towards the currently observed transient climate state
with a global mean imbalance of the order of 0.5 W m<inline-formula><mml:math id="M73" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> at the TOA
(Hansen et al., 2011), we aimed at a tuning of a climate in radiative
equilibrium to prevent the global mean surface temperature from drifting
too much under the conditions of a stable climate. This approach is
necessary for millennium-scale simulations. We aimed at a net surface energy
balance close to 0 W m<inline-formula><mml:math id="M74" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> under pre-industrial-level forcing (1850) after
hundreds of years of spin-up. Thereby, we mainly focused on the net surface
energy (SFC) balance rather than the TOA energy budget as we know that the
atmospheric model is not fully conservative. The resulting parameter
combination, together with historical simulations, will be described in a
forthcoming paper in conjunction with partners in the EU-Crescendo project.</p>
      <p id="d1e2258">In order to avoid a significant long-term sea surface height reduction in
coupled model runs due to a net precipitation–evaporation (<inline-formula><mml:math id="M75" display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula>–<inline-formula><mml:math id="M76" display="inline"><mml:mi>E</mml:mi></mml:math></inline-formula>) imbalance
in the EC-Earth3 atmosphere of about <inline-formula><mml:math id="M77" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.0174 <inline-formula><mml:math id="M78" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">mm</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">d</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> in the historical
period, the coupled model implements a runoff flux corrector, which
amplifies river runoff by 8.65 % in order to compensate for this effect.</p>
      <p id="d1e2299">In addition to the EC-Earth3-Veg-LR configuration, there is also a
configuration without interactive vegetation, EC-Earth3-LR. In this
configuration, vegetation is prescribed by the Paleo-MIP (PMIP). These two
configurations produce very similar results when EC-Earth3-LR is forced by
the vegetation from a corresponding EC-Earth3-Veg-LR simulation. The tuning
parameters are identical in both configurations.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS4">
  <label>2.2.4</label><title>High-resolution configurations</title>
      <p id="d1e2310">Earlier studies with EC-Earth at high resolution using EC-Earth 3.1 have
shown improvements with resolution, e.g., in North Atlantic blocking (Davini
et al., 2017b) and in the representation of tropical rainfall extremes
(Davini et al., 2017a). This motivated further development of the EC-Earth3
configuration in high resolution, with increased atmospheric and oceanic
resolution, derived from an earlier state of development. It features a T511
spectral resolution for IFS and 0.25<inline-formula><mml:math id="M79" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution for ORCA/NEMO. A
preliminary tuned version, EC-Earth3P-HR, is used in current projects and in
CMIP6 MIPs. Another high-resolution configuration, EC-Earth3-HR, closer to
the EC-Earth3 base configuration, is still under development. Here we focus
on the configuration EC-Earth3P-HR, which so far has been better documented.</p>
      <p id="d1e2322">At an early stage of development, EC-Earth3P-HR was branched off from
the main line in order to apply it for the EU project PRIMAVERA and the
HighResMIP endorsed by CMIP6. PRIMAVERA and HighResMIP are focusing on the
impact of horizontal resolution on the simulation of climate and its
variability. The HighResMIP protocol requires modifications of the standard
configuration to allow for a clean assessment of the impact of horizontal
resolution. The motivation and a detailed description of those deviations from the
base version, EC-Earth3, can be found in Haarsma et al. (2020). Below we
give a short summary of the most important deviations of EC-Earth3P-HR.
<list list-type="bullet"><list-item>
      <p id="d1e2327">The stratospheric aerosol forcing is handled in a simplified way that
neglects the details of the vertical distribution and only takes into
account the total aerosol optical depth in the stratosphere, which is then
evenly distributed across the stratosphere. No indirect aerosol effect has
been implemented.</p></list-item><list-item>
      <p id="d1e2331">A SST and sea ice forcing dataset specially developed for HighResMIP is
used for AMIP experiments (Kennedy et al., 2017). The major differences
compared to the standard SST forcing datasets for CMIP6 are the higher
spatial (0.25<inline-formula><mml:math id="M80" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> vs. 1<inline-formula><mml:math id="M81" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>) and temporal (daily vs. monthly) resolution.</p></list-item><list-item>
      <p id="d1e2353">The vegetation and its albedo are prescribed as present-day climatologies
that are constant in time.</p></list-item></list>
Under HighResMIP, simulations are performed with EC-Earth3P-HR in high
resolution and in the standard-resolution EC-Earth3P (T255 for IFS and 1.0<inline-formula><mml:math id="M82" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>
for ORCA/NEMO). A full description of EC-Earth3P-HR including
technical implementation and post-processing can be found in Haarsma et al. (2020). EC-Earth3P-HR was not tuned differently compared to the
standard resolution at the time due to very high computational demands.
This approach is consistent with most other models in Europe, as represented
in the H2020 PRIMAVERA project (Roberts et al., 2018).</p>
      <p id="d1e2366">Based on results of Haarsma et al. (2020), increasing horizontal resolution
does not result in a general reduction of biases and overall improvement of
the climate variability. Deteriorating impacts can be detected for specific
regions and phenomena such as some Euro-Atlantic weather regimes, whereas
others such as the El Niño–Southern Oscillation show a clear improvement in
their spatial structure. Analysis of the kinetic energy spectrum indicates
that the sub-synoptic scales are better resolved at higher resolution
(Klaver et al., 2020) in EC-Earth.</p>
      <p id="d1e2369">Despite a lack of clear improvement with respect to biases and synoptic-scale variability for the high-resolution version of EC-Earth, the better
representation of sub-synoptic scales results in better representation of
phenomena and processes on these scales such as tropical cyclones (Roberts
et al., 2020) and ocean–atmosphere interaction along western boundary
currents (Belluci et al., 2021). The impact of resolution for EC-Earth and
other climate models participating in HighResMIP will be analyzed more in-depth in upcoming publications.</p>
</sec>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>EC-Earth3-AerChem</title>
      <p id="d1e2381">EC-Earth3-AerChem (van Noije et al., 2021) is the configuration with
interactive aerosols and atmospheric chemistry used in the Aerosol and
Chemistry Model Intercomparison Project (AerChemMIP; Collins et al., 2017).
In this configuration, TM5 is used to simulate tropospheric aerosols and
chemistry based on the CMIP6 emission pathways for aerosols and chemically
reactive gases. The resolution of TM5 is 3 <inline-formula><mml:math id="M83" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 2<inline-formula><mml:math id="M84" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> (longitude <inline-formula><mml:math id="M85" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> latitude) with 34 vertical levels and a top at 0.1 hPa. IFS and
NEMO have the same resolutions as in the standard configuration. TM5 and IFS
exchange fields with a 6 h frequency. TM5 receives a large set of 2D and
3D meteorological fields from IFS and provides 3D distributions of
aerosols, ozone (O<inline-formula><mml:math id="M86" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>), and methane (CH<inline-formula><mml:math id="M87" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>) in return. Table 7 lists
the fields exchanged between IFS and TM5 through the coupler.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T7" specific-use="star"><?xmltex \currentcnt{7}?><label>Table 7</label><caption><p id="d1e2428">Variables exchanged with a 6 h frequency between the atmosphere and the chemical transport model (CTM) TM5 in EC-Earth3-AerChem.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Atmosphere <inline-formula><mml:math id="M88" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> CTM</oasis:entry>
         <oasis:entry colname="col2">CTM <inline-formula><mml:math id="M89" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Atmosphere</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Logarithm of surface pressure</oasis:entry>
         <oasis:entry colname="col2">Ozone mixing ratio</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Vorticity (3D)</oasis:entry>
         <oasis:entry colname="col2">Methane mixing ratio</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Divergence (3D)</oasis:entry>
         <oasis:entry colname="col2">Aerosol number and component mass mixing ratios (25 fields in total)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Surface orography</oasis:entry>
         <oasis:entry colname="col2">Aerosol extinction (14 wavelengths)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Surface pressure</oasis:entry>
         <oasis:entry colname="col2">Aerosol single-scattering albedo (14 wavelengths)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Air temperature (3D)</oasis:entry>
         <oasis:entry colname="col2">Aerosol asymmetry factor (14 wavelengths)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Specific humidity (3D)</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Cloud liquid/ice water content (3D)</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Cloud area fraction (3D)</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Overhead/underfoot cloud area fraction (3D)</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Updraft/downdraft convective air mass flux (3D)</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Updraft/downdraft convective air mass detrainment rate (3D)</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Land–sea mask</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Surface albedo</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Surface roughness length</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sea ice fraction</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sea surface temperature</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">10 m wind speed</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Skin reservoir water content</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2 m temperature</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2 m dew-point temperature</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Surface latent heat flux</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Surface sensible heat flux</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Eastward/northward surface stress</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Large-scale precipitation</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Convective precipitation</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Surface shortwave radiation</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Snow depth</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Soil wetness in topsoil layer</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Vegetation type fraction (15 categories)</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">High/low vegetation cover</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>EC-Earth3-CC</title>
      <p id="d1e2736">EC-Earth3-CC is the configuration that includes a description of the carbon
cycle, which is used for the Coupled Climate–Carbon Cycle Model
Intercomparison Project (C4MIP; Jones et al., 2016). EC-Earth3-CC allows
simulations with emissions forcing rather than with prescribed
concentrations only as in the ScenarioMIP. This configuration uses a single
carbon tracer in the atmosphere, advected by a version of TM5 with a reduced
number of vertical levels (10 instead of 34), to simulate the transport of
CO<inline-formula><mml:math id="M90" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> through the atmosphere. The resolution and coupling frequency for
the exchange between IFS and TM5 are the same as for the interactive
aerosols and chemistry version of TM5 (EC-Earth3-AerChem) described in the
preceding section. In effect the data transfer in both directions is much
reduced. The CO<inline-formula><mml:math id="M91" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> exchange with the ocean and terrestrial
biosphere is calculated in PISCES and LPJ-GUESS, respectively, based on
surface mixing ratios from the previous day received from TM5.</p>
      <p id="d1e2757">PISCES calculates the air–sea CO<inline-formula><mml:math id="M92" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> flux at every time step after solving
for carbon chemistry in seawater. This flux is proportional to the
difference in <inline-formula><mml:math id="M93" display="inline"><mml:mrow class="chem"><mml:mi>p</mml:mi><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> between the atmosphere and the surface of the ocean. The
exchange of CO<inline-formula><mml:math id="M94" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> between the ocean and TM5 is realized once a day after
accumulating the flux over each grid cell over 24 h. Furthermore,
physical transport of passive tracers in the ocean presents a slight
artificial mass imbalance. To prevent it from becoming significant for
carbon during the spin-up we applied a uniform correction to dissolved
inorganic carbon at the end of each year, after taking into account all
sources and sinks.</p>
      <p id="d1e2791">A variant of EC-Earth-CC can also be run concentration-driven by excluding
TM5. PISCES and LPJ-GUESS then read a uniform global atmospheric CO<inline-formula><mml:math id="M95" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
concentration.</p>
      <p id="d1e2803">Tables 8 and 9 list the fields exchanged between the CTM on the one hand
and the vegetation and ocean biogeochemistry models on the other hand
through the coupler.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T8" specific-use="star"><?xmltex \currentcnt{8}?><label>Table 8</label><caption><p id="d1e2810">Variables exchanged with a 24 h frequency between the vegetation model LPJ-GUESS and the chemical transport model TM5 in EC-Earth3-CC. <inline-formula><mml:math id="M96" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula> Fluxes occur once a year and are distributed evenly over the following year.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="4.5cm"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="5cm"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Vegetation <inline-formula><mml:math id="M97" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> CTM (CC only)</oasis:entry>
         <oasis:entry colname="col2">CTM <inline-formula><mml:math id="M98" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Vegetation (CC only)</oasis:entry>
         <oasis:entry colname="col3">Atmosphere <inline-formula><mml:math id="M99" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> CTM (every 6 h)</oasis:entry>
         <oasis:entry colname="col4">CTM <inline-formula><mml:math id="M100" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Atmosphere</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Net primary production</oasis:entry>
         <oasis:entry colname="col2">CO<inline-formula><mml:math id="M101" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> mixing ratio</oasis:entry>
         <oasis:entry colname="col3">Logarithm of surface pressure</oasis:entry>
         <oasis:entry colname="col4">CO<inline-formula><mml:math id="M102" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> mixing ratio</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Heterotrophic respiration</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Vorticity (3D)</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Establishment<inline-formula><mml:math id="M103" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Divergence (3D)</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Reproduction<inline-formula><mml:math id="M104" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Surface orography</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Burned vegetation and litter<inline-formula><mml:math id="M105" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Surface pressure</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sowing<inline-formula><mml:math id="M106" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Air temperature (3D)</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Fast and slow harvested products<inline-formula><mml:math id="M107" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Specific humidity (3D)</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Land cover change<inline-formula><mml:math id="M108" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Updraft/downdraft convective air mass flux (3D)</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Carbon leaching</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Updraft/downdraft convective air mass detrainment rate (3D)</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Land–sea mask</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Surface roughness length</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">10 m wind speed</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Surface latent heat flux</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Surface sensible heat flux</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Eastward/northward surface stress</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T9" specific-use="star"><?xmltex \currentcnt{9}?><label>Table 9</label><caption><p id="d1e3147">Variables exchanged with a 24 h frequency between the chemical transport model TM5 and the ocean biogeochemistry model PISCES.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Ocean BGC <inline-formula><mml:math id="M109" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> CTM (CC only)</oasis:entry>
         <oasis:entry colname="col2">CTM <inline-formula><mml:math id="M110" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Ocean BGC (CC only)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">CO<inline-formula><mml:math id="M111" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> flux</oasis:entry>
         <oasis:entry colname="col2">CO<inline-formula><mml:math id="M112" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> mixing ratio</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S2.SS5">
  <label>2.5</label><title>EC-Earth3-GrIS</title>
      <p id="d1e3224">EC-Earth3-GrIS is a configuration that couples the EC-Earth3-Veg to the
Parallel Ice Sheet Model v1.1 (PISM, Sect. 3.8). It is used to model the
Greenland Ice Sheet (GrIS) evolution and its feedback with the climate
system in the Ice Sheet Model Intercomparison project (ISMIP6; Nowicki et al., 2016). GrIS handles the ice sheet dynamical and thermodynamical
processes, including ice flow, subglacial hydrology, bed deformation, and the basal ice melt.</p>
      <p id="d1e3227">In the configurations EC-Earth3 and EC-Earth3-Veg, ice sheets are
represented by a perennial snow layer of 9 m water equivalent. Snowfall
on these areas is immediately redistributed into the ocean as ice to prevent
excessive snow accumulation. Perennial snow albedo and snow density are
fixed at 0.8 and 300 kg m<inline-formula><mml:math id="M113" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively, and the snowpack is in thermal
contact with the underlying soil. In EC-Earth3-GrIS, the surface
parameterization in EC-Earth3 is adjusted in order to better account for the
presence of the ice sheet. The modifications include introduction of an
explicit ice sheet mask obtained from PISM into HTESSEL and application of
values representative of an ice sheet to calculate the surface energy
balance and subsurface heat and energy transfer for glacierized grid points.
In addition, if a grid cell is with an ice sheet but no snow cover (i.e., bare
ice), the ice can melt and contribute to surface runoff if the energy flux
at the surface is positive. Furthermore, a time-varying snow albedo
parameterization is introduced for snow on ice sheets (Helsen et al., 2017)
in  EC-Earth3-GrIS. The parameterization allows the dependence of snow
albedo on snow aging, melt, and refreezing. For fresh snow a maximum value of
0.85 is used. Under dry non-melting conditions, aging may reduce the snow
albedo to 0.75, and during snowmelt the albedo decreases to a lower limit of
0.6. The albedo of refrozen meltwater is set to 0.65.</p>
      <p id="d1e3242">The new land ice physics described above are used for EC-Earth3 low-resolution configurations, in particular for PMIP experiments. For other
resolutions, there is no coupling to the ice sheet model. Instead, the ice
sheet mask can either be read in as boundary conditions or defined by snow
depth exceeding a certain threshold (9 m).</p>
      <p id="d1e3245">The fields exchanged between EC-Earth and PISM are listed in Table 10.
Information is exchanged once a year with monthly variations. IFS provides
forcing fields of surface mass balance (SMB) and subsurface temperature to
PISM. The SMB is calculated from precipitation, evaporation, and runoff.
PISM returns the ice topography and ice mask to IFS and the calving (mass
and energy) and basal melt (mass) fluxes to NEMO.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T10" specific-use="star"><?xmltex \currentcnt{10}?><label>Table 10</label><caption><p id="d1e3252">Variables exchanged between the atmosphere model IFS and the ice sheet model PISM, as well as between the ocean model NEMO and ice sheet model PISM. Information is exchanged once a year with monthly variations.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Atmosphere <inline-formula><mml:math id="M114" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Ice sheet</oasis:entry>
         <oasis:entry colname="col2">Ice sheet <inline-formula><mml:math id="M115" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Atmosphere</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Subsurface temperature</oasis:entry>
         <oasis:entry colname="col2">Ice topography</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Surface mass balance (<inline-formula><mml:math id="M116" display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula>–<inline-formula><mml:math id="M117" display="inline"><mml:mi>E</mml:mi></mml:math></inline-formula>–<inline-formula><mml:math id="M118" display="inline"><mml:mi>R</mml:mi></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">Ice extent</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Ocean <inline-formula><mml:math id="M119" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Ice sheet</oasis:entry>
         <oasis:entry colname="col2">Ice sheet <inline-formula><mml:math id="M120" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Ocean</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Calving fluxes (mass and energy)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Basal melt flux (mass)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S2.SS6">
  <label>2.6</label><title>HPC of different configurations</title>
      <p id="d1e3379">The increasing capabilities of ESMs, such as EC-Earth3, and the ability to
perform large community experiments, such as CMIP6, are strongly linked to
the amount of HPC capacity available and to the efficient use of these
resources. As such, CMIP6 is an excellent opportunity to study the
computational performance of ESMs, in particular for models such as
EC-Earth3 that are developed and used by a wide range of institutions and
integrated on different computational platforms.</p>
      <p id="d1e3382">The computational performance of EC-Earth3 has been evaluated in order to
achieve different goals:
<list list-type="bullet"><list-item>
      <p id="d1e3387">to detect performance bottlenecks for future improvements,</p></list-item><list-item>
      <p id="d1e3391">to compare the performance of different computational platforms used by the
consortium and evaluate how different hardware can affect the performance of
EC-Earth, and</p></list-item><list-item>
      <p id="d1e3395">to compare different model configurations to analyze which components or
calculations represent bottlenecks in the execution.</p></list-item></list>
A first optimization and performance analysis of a preliminary version of
EC-Earth3 (EC-Earth3P-HR) was presented in Haarsma et al. (2020). This
particular version, which was used in the context of the H2020 PRIMAVERA
project (Roberts et al., 2018), was integrated at both standard and high
resolutions following the HighResMIP protocol (Haarsma et al., 2016). In
Haarsma et al. (2020), the high-resolution configuration was analyzed in
order to detect performance bottlenecks and to provide solutions for these.
The high resolution was used for this purpose because of easier
detectability of problems related to the scalability and computational
efficiency.</p>
      <p id="d1e3399">The rest of this section will focus on the performance of the standard-resolution version of EC-Earth3 in order to fulfill the second and third
goals presented.</p>
      <p id="d1e3402">The evaluation was done through a set of metrics independent of the platform
and of the underlying parallel programming models. To make this possible,
the EC-Earth standard-resolution configuration discussed hereafter was
analyzed through CPMIP, a computational performance model intercomparison
project (MIP) presented by Balaji et al. (2017).
<?xmltex \hack{\newpage}?>
This analysis is done in two levels. The first level (Table 11) includes
basic performance metrics for four different platforms (Rhino, RN;
Marenostrum4, MN4; ECMWF-CCA, CCA; and Beskow, BK) in order to compare
the performance of two configurations (EC-Earth3 and EC-Earth-Veg) on those
different platforms. The second level (Table 12) includes the complete set
of CPMIP metrics collected on Marenostrum4 for EC-Earth3.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T11" specific-use="star"><?xmltex \currentcnt{11}?><label>Table 11</label><caption><p id="d1e3411">Basic CPMIP metrics of EC-Earth3 and EC-Earth3-Veg with standard resolution for four different architectures and platforms: Marenostrum4 (MN4, LENOVO SD530), Rhino (RN, BullX B500), ECMWF-CCA (CCA, CRAY XC40), and Beskow (BK, CRAY XC40). The basic metrics are SYPD (simulated years per day), ASYPD (actual simulated years per day), CHSY (core hours per simulated year), and parallelization (number of MPI processes used).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="2cm"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="2cm"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="1cm"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="1cm"/>
     <oasis:colspec colnum="5" colname="col5" align="justify" colwidth="1cm"/>
     <oasis:colspec colnum="6" colname="col6" align="justify" colwidth="1cm"/>
     <oasis:colspec colnum="7" colname="col7" align="justify" colwidth="1.7cm"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Architecture</oasis:entry>
         <oasis:entry colname="col2">Configuration</oasis:entry>
         <oasis:entry colname="col3">Platform</oasis:entry>
         <oasis:entry colname="col4">SYPD</oasis:entry>
         <oasis:entry colname="col5">ASYPD</oasis:entry>
         <oasis:entry colname="col6">CHSY</oasis:entry>
         <oasis:entry colname="col7">Parallelization</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">LENOVO SD530 <?xmltex \hack{\hfill\break}?>BullX B500 <?xmltex \hack{\hfill\break}?>CRAY XC40 <?xmltex \hack{\hfill\break}?>CRAY XC40 <?xmltex \hack{\hfill\break}?>CRAY XC40</oasis:entry>
         <oasis:entry colname="col2">EC-Earth3 <?xmltex \hack{\hfill\break}?>EC-Earth3 <?xmltex \hack{\hfill\break}?>EC-Earth3 <?xmltex \hack{\hfill\break}?>EC-Earth-Veg <?xmltex \hack{\hfill\break}?>EC-Earth-Veg</oasis:entry>
         <oasis:entry colname="col3">MN4 <?xmltex \hack{\hfill\break}?>RN <?xmltex \hack{\hfill\break}?>CCA <?xmltex \hack{\hfill\break}?>BK <?xmltex \hack{\hfill\break}?>CCA</oasis:entry>
         <oasis:entry colname="col4">15.2 <?xmltex \hack{\hfill\break}?>16.2 <?xmltex \hack{\hfill\break}?>6.03 <?xmltex \hack{\hfill\break}?>12.4 <?xmltex \hack{\hfill\break}?>6.67</oasis:entry>
         <oasis:entry colname="col5">9.87 <?xmltex \hack{\hfill\break}?>16.2 <?xmltex \hack{\hfill\break}?>4.84 <?xmltex \hack{\hfill\break}?>6.65 <?xmltex \hack{\hfill\break}?>5.32</oasis:entry>
         <oasis:entry colname="col6">1119 <?xmltex \hack{\hfill\break}?>1276 <?xmltex \hack{\hfill\break}?>1289 <?xmltex \hack{\hfill\break}?>1676 <?xmltex \hack{\hfill\break}?>1332</oasis:entry>
         <oasis:entry colname="col7">768 <?xmltex \hack{\hfill\break}?>864 <?xmltex \hack{\hfill\break}?>324 <?xmltex \hack{\hfill\break}?>864 <?xmltex \hack{\hfill\break}?>342</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e3546">In Table 11 SYPD measures the model speed by counting the number of years
the model could simulate within a 24 h period, given a certain
configuration and computational platform. ASYPD is measured for a
long-running experiment and includes queueing time, taking into account the
sharing of HPC resources. CHSY measures the computational cost of the model
for the given configuration and computational platform. Finally,
parallelization represents the number of MPI processes used.</p>
      <p id="d1e3549">Comparing EC-Earth3 on two platforms (MN4 and RN) with similar
parallelization, the BullX B500 experiment is slightly faster than the LENOVO
SD530 experiment, but it also uses more resources and as a consequence the
CHSY is slightly higher. On the other hand, we can obtain similar performance
in BullX B500 and LENOVO SD530 experiments, even though the BullX B500
experiment is run on a platform with technology 5 years older, proving
that configurations without an expensive computation can be simulated
efficiently in more commodity clusters. Obviously, as shown in Haarsma et al. (2020), the performance of more demanding configurations will be
affected by several issues, such as the MPI communications overhead, and a
better network will ensure that better hardware will obtain better
performance too. Finally, the experiment with EC-Earth3 on CCA proves that the
user can achieve a similar efficiency using a setup with fewer processes and
obtaining a similar CHSY, though the results will need more time to be
executed.</p>
      <p id="d1e3552">It is important to note that the workflow of these experiments comprises
different steps, with dependencies between them. This is especially true
when the storage is a constraint and simulation steps need data from prior
steps before post-processing. In such cases, the way these dependencies are
handled may have an impact on the overall throughput.</p>
      <p id="d1e3555">LENOVO SD530 experiments at BSC were run using a workflow management tool
called Autosubmit. This tool handles dependencies in an automatic way and is
able to pack multiple tasks or simulation steps in the same job execution,
which may reduce the amount of job queuing and thus have an impact on the
ASYPD. This does not necessarily explain the differences between the three
platforms in the study given the different use policies, load on the
machine from other users, scheduling parameters, and usage existing among
them.</p>
      <p id="d1e3558">The BullX B500 and CRAY XC40 (on BK platform) experiments are not directly
comparable because the CRAY XC40 experiment includes LPJ-GUESS as a
vegetation component. Both simulations use the same parallel resources, and
the performance of the CRAY XC40 experiment on BK is lower. The results suggest
that LPJ-GUESS is less efficient than the other components present in the
standard configuration of EC-Earth and that this difference in performance is
largely due to the way the output is performed. The problem is to be studied
to improve it in the future. A new approach is under development to improve
the computational efficiency of LPJ-GUESS. On the other hand, the
EC-Earth-Veg configuration run in the CRAY XC40 experiment on CCA suggests
that when the execution time of IFS and NEMO components is long enough
(since we are using fewer parallel resources for their execution), the
LPJ-GUESS component is not a bottleneck anymore, achieving a CHSY only
slightly higher. However, the single point to take into account in this case
is that the user will need more time to finish the simulations, since the
SYPD is lower compared to the setup used on the BK platform.</p>
      <p id="d1e3562">These results will be used to compare the computational performance of
EC-Earth with other models running the same CMIP6 configuration or with a
similar complexity. However, preliminary results from the collection
(provided by other institutions) prove that the efficiency of EC-Earth
(comparing CHSY among models with a similar complexity or number of grid
points) seems to show good results on average from the computational
performance side. The cost of indirect processes such as coupling or output
costs is also similar to the results obtained by other models.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>The component models</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Atmosphere</title>
      <p id="d1e3581">The atmosphere component of the EC-Earth model is based on the Integrated
Forecast System (IFS) CY36R4 of the European Centre for Medium-Range Weather
Forecasts (ECMWF). This specific cycle of the IFS was part of ECMWF's
operational seasonal forecast system S4
(<uri>https://www.ecmwf.int/sites/default/files/elibrary/2011/11209-new-ecmwf-seasonal-forecast-system-system-4.pdf</uri>, last access: 18 March 2022).
IFS solves the hydrostatic primitive equations using a two-time-level,
semi-implicit, semi-Lagrangian discretization. Horizontal derivatives are
computed in spectral space, while the computation of advection, the physical
parameterizations, and in particular the nonlinear terms is conducted on
the linear reduced Gaussian grid. The IFS is documented extensively at
<uri>https://www.ecmwf.int/en/publications/ifs-documentation</uri> (last access: 18 March 2022) (for
example <uri>https://www.ecmwf.int/sites/default/files/elibrary/2010/9232-part-iii-dynamics-and-numerical-procedures.pdf</uri> (last access: 18 March 2022)
for the dynamics and <uri>https://www.ecmwf.int/sites/default/files/elibrary/2010/9233-part-iv-physical-processes.pdf</uri> (last access: 18 March 2022)
for the physical processes). Here we only document the updates to the
original IFS that were necessary for making long climate simulations.</p>
      <p id="d1e3596">The physical aspects of the atmosphere model in EC-Earth needed some
adjustments and updates compared to the original IFS CY36R4. Most of these
modifications are not necessary for numerical weather prediction (NWP) or even
seasonal forecasts but are crucial when running long climate simulations
(decadal, centennial, or longer) or simulations under different climate
conditions (e.g., future scenarios or paleo-simulations).</p>
      <p id="d1e3599">The semi-Lagrangian advection scheme of IFS does not conserve mass or
energy in the NWP version. A dry air mass conservation fixer has been
available in IFS since CY25R1 and is active in EC-Earth to correct global
pressure for the gain or loss of atmospheric mass. Similarly, to conserve
humidity during transport we backported a simple proportional fixer from IFS
cycle CY38R1 (Rasch and Williamson, 1990; Diamantakis and Flemming, 2014).
This significantly reduced the bias of the average global
precipitation–evaporation balance in the model from about <inline-formula><mml:math id="M121" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>0.030 to
<inline-formula><mml:math id="M122" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.017 <inline-formula><mml:math id="M123" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">mm</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">d</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> and consistently (due to the associated latent heat of
condensation) in the radiative balance in the atmosphere from about <inline-formula><mml:math id="M124" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1.65 W m<inline-formula><mml:math id="M125" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> (a source of energy) to about <inline-formula><mml:math id="M126" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.25 W m<inline-formula><mml:math id="M127" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> .</p>
      <p id="d1e3666">The IFS CY36R4 version adopted for EC-Earth3 produces a reasonable
quasi-biennial oscillation (QBO) in the tropical stratosphere when running
at the standard resolution (T255L91), but not for any other available
horizontal or vertical resolutions. Therefore, we substituted the original
version-dependent latitudinal profile of the momentum flux in the
non-orographic gravity wave scheme (which was originally developed ad hoc
for the ECMWF system 4 seasonal forecast system) with a
resolution-dependent parameterization of non-orographic gravity wave drag by
backporting changes later introduced in IFS CY40R1 (see Davini et al., 2017a,
for more details). This change allowed EC-Earth to recover a realistic QBO
at all resolutions considered without deteriorating the jet streams.</p>
      <p id="d1e3670">Convection in the NWP version of IFS CY36R4 reaches its maximum around local
noon in contrast to observations that peak later in the afternoon. A closure
described by Bechtold et al. (2014) improving the diurnal cycle of
convection has been implemented in EC-Earth3. For EC-Earth3, Rayleigh
friction was activated in EC-Earth IFS for all resolutions to avoid
unphysically large wind speeds at higher resolution.</p>
      <p id="d1e3673">In atmosphere-only simulations, the sea ice albedo is taken from a look-up
table with climatological monthly values for sea ice albedo (Ebert and
Curry, 1993) that take into account the annual cycle of highly reflective
snow cover during winter and spring and the darker surface of melting sea
ice during summer. In the coupled model, the sea ice albedo is computed in
the sea ice model LIM3, and the updated values are used by the atmospheric
component. The broadband sea ice albedo from LIM3 is then mapped on six
shortwave bands with a mapping function.</p>
      <p id="d1e3676">The time stepping scheme needed technical adjustments to avoid an overflow
of integer time step counters in order to allow making simulations beyond
32 768 time steps. The IFS output is saved in the GRIB1 data format, which also
has a limit in the number of time steps that can be saved. This limit was
overcome in EC-Earth3 by setting the time step to 0 and updating the GRIB-encoded reference time instead each time that output is written.</p>
      <p id="d1e3679">CMIP6 requires transient climate forcings to account for the change in
atmospheric composition and other external drivers of the climate (e.g.,
insolation). The necessary interfaces to read the prescribed greenhouse gas
concentrations, aerosol optical properties, stratospheric aerosols,
stratospheric ozone, and insolation have been implemented in the IFS code in
EC-Earth. Table 13 lists the sources and versions of the CMIP6 forcing
datasets.</p>
      <p id="d1e3682">Well-mixed greenhouse gases (WMGHGs) explicitly included in EC-Earth's
radiation scheme are CO<inline-formula><mml:math id="M128" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, CH<inline-formula><mml:math id="M129" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>, nitrous oxide (N<inline-formula><mml:math id="M130" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O), CFC-12,
and CFC-11. Together these are responsible for about 98 % of the total
radiative forcing by WMGHGs in 2014 compared to 1850 (Meinshausen et al.,
2017). The radiative effects of the remaining WMGHGs (HCFC-22, CFC-113,
CCl4) are accounted for in terms of CFC-11 equivalents (Meinshausen et
al., 2017). The mixing ratios of each of the WMGHGs that are explicitly
included and not provided by TM5 are prescribed by scaling their monthly
zonal mean climatologies as used in IFS by a single time-dependent global
factor. In this way, the global mean surface mixing ratios are forced to
their CMIP6 pathways (Meinshausen et al., 2017). To reduce discontinuities,
the scale factors are calculated on a monthly basis by interpolation of the
time series of annual values provided by CMIP6. Any delays due to transport
from the surface to the upper parts of the atmosphere are ignored in this
approach.</p>
      <p id="d1e3712">Tropospheric aerosols are either simulated interactively in TM5 (in the
EC-Earth3-AerChem configuration) or prescribed as a pre-industrial
climatology plus an anthropogenic contribution (all other configurations).
The pre-industrial aerosol background is specified using a monthly
climatology based on TM5. This climatology was obtained from an offline TM5
simulation driven by ERA-Interim meteorology for the years 1981–1985 using
CMIP6 anthropogenic emissions for the year 1850. The radiative and cloud
effects of the pre-industrial aerosols are calculated based on the ERA-Interim reanalysis and the same set of variables as when aerosols are
interactively simulated by TM5. The anthropogenic contribution is specified
following the simple plume approach of MACv2-SP (Stevens et al., 2017),
which provides a simplified parametric representation of the optical
properties (extinction, single-scattering albedo, and asymmetry factor) of
the anthropogenic contribution to the tropospheric aerosol burden (relative
to 1850 levels), consistent with the CMIP6 time series of historical
(Stevens et al., 2017) and future (Fiedler et al., 2019) anthropogenic
emissions. In EC-Earth, MACv2-SP is coupled with the IFS radiation scheme to
compute the optical properties for the 14 wavelength bands of the SW
radiation. More precisely, the optical properties are calculated at the band
mean wavelengths weighted by the incoming solar radiation. In addition,
MACv2-SP provides a simple way to account for the effect of anthropogenic
aerosols on clouds. Specifically, it provides a scale factor for the cloud
droplet number concentration (CDNC) in each column based on the vertically
integrated optical depth at 550 nm.</p>
      <p id="d1e3716">In the EC-Earth3-AerChem, aerosol impacts on clouds are included by
calculating CDNC depending on the modal number and mass concentrations from
TM5, following Abdul-Razzak and Ghan (2000). For all other model
configurations the CDNC corresponds to pre-industrial aerosol conditions
and an additional scaling factor from MACv2-SP that is included to account
for the cloud forcing by anthropogenic aerosols. The resulting forcing
includes contributions due to both cloud reflectivity and cloud lifetime
effects, as the lifetime of clouds explicitly depends on CDNC. Currently
only the activation and autoconversion of liquid cloud droplets are linked
explicitly to ambient aerosol concentrations. For ice clouds the EC-Earth3
model still retains the parameterization from the original IFS CY36R4.</p>
      <p id="d1e3719">As EC-Earth3 uses MACv2-SP in combination with a pre-industrial aerosol
climatology, natural aerosol variability is only accounted for via the
prescribed seasonal cycle of the climatology. Furthermore, MACv2-SP only
captures the seasonal cycle and long-term changes in the optical properties
and the derived CDNC impact factor of anthropogenic aerosols. Diurnal
variability in aerosol amounts or properties is not explicitly described.
Day-to-day variability is only included to the extent captured by the
seasonal cycles of the pre-industrial climatology and MACv2-SP. Of the
interannual variability in the amount and properties of anthropogenic
aerosols, only the long-term changes in plume strengths, which are assumed
to covary with the 11-year averaged emissions of SO<inline-formula><mml:math id="M131" display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> plus NH<inline-formula><mml:math id="M132" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> in the
associated countries, are accounted for. Changes in the spectral
distribution of the optical properties, the single-scattering albedo, and
asymmetry factor of anthropogenic aerosols due to long-term changes in their
size distribution and composition are ignored by MACv2-SP.</p>
      <p id="d1e3740">Stratospheric aerosols are prescribed using the CMIP6 dataset of aerosol
radiative properties, which covers the period 1850 to 2014 and for the more
recent period is based on satellite data assembled by Thomason et al. (2018). The dataset consists of monthly resolved zonal mean fields, which
are provided at the 14 shortwave (SW) and 16 longwave (LW) bands of the
IFS's radiation schemes. For the SW scheme, the extinction,
single-scattering albedo, and asymmetry factor are specified, whereas only
the absorption is taken into account for the LW scheme, since aerosol
scattering in the LW is neglected in the atmospheric component of EC-Earth.
Forcing data are vertically interpolated beforehand for the 62- and 91-level
configurations, taking into account the seasonality of model level heights,
whereas horizontal and monthly to daily interpolation is done online. When
interpolating or averaging the radiative property fields, they are first
made extensive by including the appropriate weighting factors (e.g.,
extinction is converted to optical depth, single-scattering albedo to
absorption optical depth, and likewise for the asymmetry factor). The
forcing located below the online-diagnosed thermal tropopause level is
excluded. This implementation is used in all current EC-Earth3 configurations
with the exception of the EC-Earth3P-HR configuration, which uses a
simplified implementation based on a monthly vertically integrated,
latitude-dependent aerosol optical depth (AOD) forcing at 550 nm, which is then vertically
distributed across the stratosphere. In both implementations, it is possible
to set the forcing fields to a constant background distribution computed as
the time average over 1850 to 2014. This background forcing is applied in
pre-industrial control and future simulations, as recommended in the CMIP6
protocol.</p>
      <p id="d1e3743">The land use forcing dataset (LUH2) from CMIP6 (Hurtt et al., 2020) cannot be
used directly as input to IFS because it does not provide the same
vegetation cover or type categories as those used by the land surface scheme
in IFS (HTESSEL; van den Hurk et al., 2000; Balsamo et al., 2009; Dutra et al., 2010; Boussetta et al., 2013) but instead provides agricultural
management information and land use transitions that are annually updated.
The vegetation cover, leaf area index (LAI), and vegetation type that are
needed for the land surface scheme and albedo parameterization in IFS can be
simulated by the dynamic vegetation model LPJ-GUESS (Smith et al., 2014).
This happens automatically in the EC-Earth3-Veg configuration wherein the
dynamic vegetation model, which uses the LUH2 dataset as an input, is
active, but for all other configurations the required vegetation cover and
type need to be precomputed. This is done by first making all CMIP6
experiments with the EC-Earth3-Veg configuration and saving the vegetation
variables that can then be reused when making the same experiment with other
model configurations.</p>
      <p id="d1e3746">The orbital parameters of the original IFS CY36R4 are fixed for present-day
conditions following the recommendations of the International Astronomical
Union (ARPEGE-Climate Version 5.1, 2008), which is sufficient for
simulations of the recent past or near future. However, for paleo-simulations in PMIP the orbital parameters need to be variable or set fixed
for a different time period. Orbital parameters and insolation are computed
using the method of Berger (1978). Using this formulation, the insolation
can be determined for any year within 10<inline-formula><mml:math id="M133" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:math></inline-formula> years of 1950 CE. The
formulation determines the Earth–Sun distance factor and solar zenith angle. The
annual cycle and diurnal cycle of solar insolation are represented with a
repeatable solar year of exactly 365 d and with a mean solar day of
exactly 24 h, respectively. The repeatable solar year does not allow for
leap years. The orbital state may be specified in one of two ways. The first
method is to specify a year, which is held constant during the integration
for an equilibrium simulation or varies yearly for a transient simulation.
The second method is to specify the orbital parameters: eccentricity,
longitude of perihelion, and obliquity. This set of values is sufficient to
specify the complete orbital state. For example, settings for piControl
integrations under 1850 CE conditions are obliquity of 23.549, eccentricity
of 0.016764, and longitude of perihelion of 100.33.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T12" specific-use="star"><?xmltex \currentcnt{12}?><label>Table 12</label><caption><p id="d1e3762">CPMIP metrics analysis for EC-Earth3 on Marenostrum4. Complete CPMIP metrics are shown in this table: resolution complexity (Cmpx), SYPD (simulated years per day), ASYPD (actual simulated years per day), CHSY (core hours per simulated year), parallelization, JPSY (Joules per year simulated), Coup. C. (coupling cost), Mem. B.(memory bloat), DO (data output cost), and DI (data intensity). From left to right we have resolution (Resol) as the total number of grid points for all the components used (ocean, atmosphere, and so on). Cmpx includes all prognostic variables of a model. JPSY quantifies the energy cost of the execution. Coup. C. represents the cost associated with the coupling among components (including interpolation and communication calculations; 8 % in this case with respect to the total execution time). Mem. B. is the division between the theoretical memory  and the real one. DO is the cost of the output process (12 % in this case with respect to the total execution time). DI is the output volume in GB per day of simulation.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="12">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:colspec colnum="9" colname="col9" align="right"/>
     <oasis:colspec colnum="10" colname="col10" align="right"/>
     <oasis:colspec colnum="11" colname="col11" align="right"/>
     <oasis:colspec colnum="12" colname="col12" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Configuration</oasis:entry>
         <oasis:entry colname="col2">Resolution</oasis:entry>
         <oasis:entry colname="col3">Cmpx</oasis:entry>
         <oasis:entry colname="col4">SYPD</oasis:entry>
         <oasis:entry colname="col5">ASYPD</oasis:entry>
         <oasis:entry colname="col6">CHSY</oasis:entry>
         <oasis:entry colname="col7">Paral.</oasis:entry>
         <oasis:entry colname="col8">JPSY</oasis:entry>
         <oasis:entry colname="col9">Coup. C.</oasis:entry>
         <oasis:entry colname="col10">Mem.</oasis:entry>
         <oasis:entry colname="col11">DO</oasis:entry>
         <oasis:entry colname="col12">DI</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(no. grid points)</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
         <oasis:entry colname="col8">(Joules)</oasis:entry>
         <oasis:entry colname="col9">(%)</oasis:entry>
         <oasis:entry colname="col10">B.</oasis:entry>
         <oasis:entry colname="col11">(%)</oasis:entry>
         <oasis:entry colname="col12">(GB)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">EC-Earth3</oasis:entry>
         <oasis:entry colname="col2">1.<inline-formula><mml:math id="M134" display="inline"><mml:mrow><mml:mn mathvariant="normal">60</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">7</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.31</oasis:entry>
         <oasis:entry colname="col4">15.2</oasis:entry>
         <oasis:entry colname="col5">9.87</oasis:entry>
         <oasis:entry colname="col6">1119</oasis:entry>
         <oasis:entry colname="col7">768</oasis:entry>
         <oasis:entry colname="col8">4.<inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:mn mathvariant="normal">41</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">7</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col9">8</oasis:entry>
         <oasis:entry colname="col10">11</oasis:entry>
         <oasis:entry colname="col11">12</oasis:entry>
         <oasis:entry colname="col12">3</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T13" specific-use="star"><?xmltex \currentcnt{13}?><label>Table 13</label><caption><p id="d1e3950">CMIP6 forcing datasets used by EC-Earth3 and EC-Earth3-Veg for DECK (diagnostic, evaluation, and characterization of klima) and historical experiments. All datasets are available from <uri>https://esgf-node.llnl.gov/search/input4mips/</uri> (last access: 18 March 2022). A more detailed description of the CMIP6 forcing datasets is available at <uri>http://goo.gl/r8up31</uri> (last access: 18 March 2022).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="3.5cm"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="6cm"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="3cm"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Forcing dataset</oasis:entry>
         <oasis:entry colname="col2">Version</oasis:entry>
         <oasis:entry colname="col3">Further info</oasis:entry>
         <oasis:entry colname="col4">Comments</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Greenhouse gas <?xmltex \hack{\hfill\break}?>concentration</oasis:entry>
         <oasis:entry colname="col2">1.2.0</oasis:entry>
         <oasis:entry colname="col3">Meinshausen et al. (2017)</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Stratospheric aerosols</oasis:entry>
         <oasis:entry colname="col2">3.0.0</oasis:entry>
         <oasis:entry colname="col3">Thomason et al. (2018)</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Ozone volume mixing ratio</oasis:entry>
         <oasis:entry colname="col2">1.0</oasis:entry>
         <oasis:entry colname="col3"><uri>http://blogs.reading.ac.uk/ccmi/forcing-databases-in-support-of-cmip6/</uri>, (last access: 18 March 2022; Hegglin et al., 2021)</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Solar</oasis:entry>
         <oasis:entry colname="col2">3.2</oasis:entry>
         <oasis:entry colname="col3">Matthes et al. (2017)</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Aerosol optical properties and relative change in<?xmltex \hack{\hfill\break}?>cloud droplet number<?xmltex \hack{\hfill\break}?>concentration</oasis:entry>
         <oasis:entry colname="col2">MACv2-SP</oasis:entry>
         <oasis:entry colname="col3">Stevens et al. (2017)</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Land use</oasis:entry>
         <oasis:entry colname="col2">v2.1 (h)istoric and (f)uture</oasis:entry>
         <oasis:entry colname="col3">Hurtt et al. (2019a, b, 2020)</oasis:entry>
         <oasis:entry colname="col4">Used only in combination with dynamic vegetation model</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Nitrogen deposition</oasis:entry>
         <oasis:entry colname="col2">v2.0</oasis:entry>
         <oasis:entry colname="col3"><uri>http://blogs.reading.ac.uk/ccmi/forcing-databases-in-support-of-cmip6/</uri> (last access: 18 March 2022; Hegglin et al., 2021)</oasis:entry>
         <oasis:entry colname="col4">Used only in combination with dynamic vegetation model</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Land surface and vegetation</title>
      <p id="d1e4113">The Hydrology Tiled ECMWF Scheme of Surface Exchanges over Land (HTESSEL;
van den Hurk et al., 2000; Balsamo et al., 2009; Dutra et al., 2010;
Boussetta et al., 2013) is the land surface model interfacing with the
atmospheric boundary layer and solving the energy and water balance at the
land surface in EC-Earth. HTESSEL discretization, for each grid
point, solves for up to six different land surface tiles that may be present
over land (bare ground, low and high vegetation, intercepted water by
vegetation, and vegetation-shaded and exposed snow). Surface radiative,
latent heat, and sensible heat fluxes are calculated as a weighted average of
the values over each tile.</p>
      <p id="d1e4116">The discretization in HTESSEL is such that coexistence in each grid point of
more than one type of low and high vegetation, respectively, is not allowed.
Therefore, for each grid point and for both low and high vegetation cover,
a dominant type (dominant meaning the type with the higher relative area
fraction for either high or low vegetation) is identified, <inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">l</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M137" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> , and a vegetation coverage for high and low vegetation types,
<inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M139" display="inline"><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mi mathvariant="normal">l</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, is specified.</p>
      <p id="d1e4163">Vegetation types and vegetation coverage can be
<list list-type="order"><list-item>
      <p id="d1e4168">prescribed from a static land use map from the Global Land Cover
Characteristics (GLCC, standard HTESSEL configuration; van den Hurk et al.,
2000; Balsamo et al., 2009; Dutra et al., 2010; Boussetta et al., 2013),</p></list-item><list-item>
      <p id="d1e4172">interactively provided when coupled with LPJ-GUESS, or</p></list-item><list-item>
      <p id="d1e4176">prescribed from a previous simulation with LPJ-GUESS.</p></list-item></list>
When the tile fractions are prescribed from GLCC, vegetation density is
parameterized according to the Lambert–Beer law of extinction of light under
a vegetation canopy and is therefore allowed to change as a function of leaf
area index (LAI) for both low and high vegetation as described in Alessandri
et al. (2017). Otherwise, LPJ-GUESS provides its own consistently simulated
background tile fractions and vegetation densities.</p>
      <p id="d1e4180">The coupling of biophysical parameters in HTESSEL has been enhanced since
CMIP5 (Weiss et al., 2014), for which only the surface resistance to
evapotranspiration and water intercepted and directly evaporated from
vegetation canopies were made to depend on LPJ-GUESS vegetation dynamics. In
the version for CMIP6, as used in EC-Earth3-Veg, the surface albedo
(including the shading effect of high vegetation), surface roughness length,
and soil water exploitable by roots for evapotranspiration also vary
following the variability of the effective vegetation cover. The improved
representation of the effective vegetation cover variability brought a
significant enhancement of the EC-Earth performance over regions where the
land–atmosphere coupling is strong, in particular over boreal winter
middle to high latitudes (Alessandri et al., 2017).</p>
      <p id="d1e4184">To represent time-dependent albedo for each grid point, a new scheme has
been adopted that computes the total surface albedo (<inline-formula><mml:math id="M140" display="inline"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) as a weighted
combination of contributions from the albedo of the low and high vegetation
types present in each grid point (<inline-formula><mml:math id="M141" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>(type), which is a function of the low or high
vegetation type), plus a time-constant background soil albedo (<inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>,
a function of space):
            <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M143" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:msub><mml:mi>a</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">l</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:msubsup><mml:mi>C</mml:mi><mml:mi mathvariant="normal">low</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:msub><mml:mi>a</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:msubsup><mml:mi>C</mml:mi><mml:mi mathvariant="normal">high</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>+</mml:mo><mml:msub><mml:mi>a</mml:mi><mml:mi>s</mml:mi></mml:msub><mml:mfenced close="]" open="["><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msubsup><mml:mi>C</mml:mi><mml:mi mathvariant="normal">low</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>C</mml:mi><mml:mi mathvariant="normal">high</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
          where <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:msubsup><mml:mi>C</mml:mi><mml:mi mathvariant="normal">low</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:msubsup><mml:mi>C</mml:mi><mml:mi mathvariant="normal">high</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula> are the effective
fractional coverages for low and high vegetation, and <inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">l</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are the
low and high vegetation types, respectively, at each grid point. The background
soil albedo was adopted from the map from Rechid et al. (2009), and a look-up
table of the albedo values <inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> for each vegetation type was estimated
using least square minimization of errors against available monthly
climatology of snow-free monthly MODIS albedo (Morcrette et al., 2008).</p>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Dynamic vegetation and terrestrial biogeochemistry</title>
      <p id="d1e4381">LPJ-GUESS (Smith et al., 2001, 2014; Lindeskog et al., 2013; Olin et al., 2015a, b), a process-based second-generation dynamic vegetation and
biogeochemistry model, is the terrestrial biosphere component of EC-Earth
globally simulating vegetation dynamics, land use and land management
following the LUH2 dataset (Hurtt et al., 2020), and both carbon (C) and
nitrogen (N) cycling in terrestrial ecosystems. LPJ-GUESS has been evaluated
in numerous studies (Smith et al., 2014; Wårlind et al., 2014) and
reproduces vegetation patterns, dynamics, and productivity, C and N fluxes
and pools, and hydrological cycling from global to regional scales, in line
with independent datasets and comparable models (e.g., Piao et al., 2013;
Zaehle et al., 2014; Sitch et al., 2015; Peters et al., 2018).</p>
      <p id="d1e4384">LPJ-GUESS is a new component in EC-Earth3 (Boysen et al., 2021), though it has previously been coupled to EC-Earth v2.3 (Weiss
et al., 2012; Alessandri et al., 2017) using a simplified coupling scheme in
which updates to leaf area index (LAI) alone were transferred between the
sub-models.</p>
      <p id="d1e4387">LPJ-GUESS is one of the first vegetation sub-models interactively coupled to
an atmospheric model, in which the size, age structure, temporal dynamics,
and spatial heterogeneity of the vegetated landscape are represented and
simulated dynamically. Such functionality has been argued to be essential
for correctly capturing biogeochemical and biophysical land–atmosphere
interactions on longer timescales (Purves and Pacala, 2008; Fisher et al., 2018) and has been shown to improve realism compared with more common
area-based vegetation schemes (Wolf et al., 2011; Pugh et al., 2018).
Different plant functional types (PFTs) co-occur in natural and managed
stands governed by climate, atmospheric CO<inline-formula><mml:math id="M149" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> (Meinshausen et al., 2017;
Riahi et al., 2017), and N deposition (Hegglin et al., 2021)
forcings. Evolving stand structure impacts growth, survivorship, and the
outcome of competition by affecting the availability of the key resources:
light, space, water, and nitrogen. Disturbances due to management actions
such as forest clearing, prognostic wildfires, and a stochastic generic
disturbance regime affect patches at random, inducing biomass loss and
resetting vegetation succession (Hickler et al., 2004). N-cycle-induced
limitations on natural vegetation and crop growth, C–N dynamics in soil
biogeochemistry, and N trace gas emissions are included (e.g., Smith et al., 2014; Olin et al., 2015a, b) as are biogenic volatile  organic compound (VOC) emissions (Hantson et al., 2017).</p>
      <p id="d1e4399">Meteorological inputs imposed on LPJ-GUESS are daily fields of surface air
temperature and 25 cm soil temperatures, precipitation, and net shortwave and
net longwave radiation from IFS/HTESSEL (Table 5). LPJ-GUESS calculates its
own soil moisture for potential plant uptake in all patches in each of the
six simulated stands independently of the single grid-cell-averaged
hydrology scheme used in HTESSEL.</p>
      <p id="d1e4403">Vegetation dynamics are simulated on six stand types in the land portion of
the grid cell (excluding large water bodies based on the static LUH2 ice and
water fraction information), five stands having dynamic grid cell fractions
consistent with the LUH2 dataset, namely natural, pasture, urban, crop, and
irrigated crop, and one, peatland, having a fixed grid cell fraction derived
from the GLCC global map used in the standard HTESSEL configuration – see
Sect. 3.2. The LUH2 dataset, including land cover fractions, management
options (N fertilization in this case), and land cover transitions, are read
in yearly after aggregation to the atmospheric and land surface model
resolution in a preprocessing step. A total of 10 woody and two herbaceous PFTs
compete in the natural stand (Smith et al., 2014), whereas two herbaceous
species, one each conforming to the C<inline-formula><mml:math id="M150" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and C<inline-formula><mml:math id="M151" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> photosynthetic pathways, are
simulated on pasture, urban, and peatland fractions. The crop stands each
have five crop functional types (CFTs) representing the properties of global
crop types and encompassing the classes found in the LUH2 database, namely
both annual and perennial C<inline-formula><mml:math id="M152" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and C<inline-formula><mml:math id="M153" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> crops, as well as C<inline-formula><mml:math id="M154" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> N fixers (Lindeskog et al., 2013).</p>
      <p id="d1e4451">At the end of each day, LPJ-GUESS calculates the effective cover for low
(high) vegetation, <inline-formula><mml:math id="M155" display="inline"><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mi mathvariant="normal">l</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), and LAI for low (high) vegetation,
LAI<inline-formula><mml:math id="M157" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">low</mml:mi></mml:msub></mml:math></inline-formula> (LAI<inline-formula><mml:math id="M158" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">high</mml:mi></mml:msub></mml:math></inline-formula>), taking into account phenology and stand
fractions in the grid cell. Dominant high and low vegetation types
corresponding to the standard HTESSEL types are calculated and sent by
LPJ-GUESS to IFS/HTESSEL on 31 December each year. These six fields link the
vegetation dynamics and land use in LPJ-GUESS to the biophysical processes
simulated at the land surface in HTESSEL, namely albedo, latent and sensible
heat exchange, runoff, and momentum exchange.</p>
      <p id="d1e4494">In the EC-Earth-CC configuration, LPJ-GUESS is coupled to TM5 in addition to
IFS and exchanges additional fields to enable prognostic global C cycle
calculations. Spatiotemporally variable surface CO<inline-formula><mml:math id="M159" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations are
sent by TM5 to LPJ-GUESS (and PISCES) to replace the annual and global mean
CO<inline-formula><mml:math id="M160" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations used in the EC-Earth-Veg configuration. LPJ-GUESS
sends daily averaged fields of net ecosystem C exchange (i.e., uptake or
release) to TM5 to complement the surface C exchange with the ocean
calculated in PISCES (see below), thereby completing the carbon cycle in
EC-Earth-CC. This daily flux includes contributions from net primary
production (NPP), heterotrophic respiration (Rh), wildfires, land use
(including crop and pasture harvest), and natural disturbances on non-managed
land. Since some processes in LPJ-GUESS are simulated with a yearly time step
(e.g., wildfires, disturbance, establishment of new individuals and
mortality, land use change), these annual fluxes are distributed evenly
throughout the year and added to the daily NPP and Rh fluxes the following
year to conserve carbon mass. Negative NPP fluxes account for CO<inline-formula><mml:math id="M161" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> uptake by
vegetation.</p>
</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>Atmospheric chemistry</title>
      <p id="d1e4532">The Tracer Model version 5 (TM5) is the atmospheric composition model of
EC-Earth (van Noije et al., 2014) used in the EC-Earth3-AerChem and
EC-Earth3-CC configuration. It can be used for the interactive simulation of
carbon dioxide (CO<inline-formula><mml:math id="M162" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>), methane (CH<inline-formula><mml:math id="M163" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>), ozone (O<inline-formula><mml:math id="M164" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>), tropospheric
aerosols, and other trace gases. These components are prescribed in IFS from
forcing datasets (see Sect. 3.1) if not provided interactively by TM5. Other
well-mixed greenhouse gases and stratospheric aerosols are prescribed in all
configurations. This section briefly describes how the various components
are configured.</p>
      <p id="d1e4562">As an alternative to the scaling approach for WMGHGs presented in Sect. 3.1, the
3D distributions of CO<inline-formula><mml:math id="M165" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and CH<inline-formula><mml:math id="M166" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> can be calculated online by TM5.
In the EC-Earth-CC configuration a single-tracer version of TM5 is used for
simulating the transport of CO<inline-formula><mml:math id="M167" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> through the atmosphere. Anthropogenic
emissions of CO<inline-formula><mml:math id="M168" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> are prescribed following the CMIP6 historical
inventory (Hoesly et al., 2018) or future scenarios (Gidden et al., 2019).
Exchange of CO<inline-formula><mml:math id="M169" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> with the ocean and terrestrial biosphere is included by
coupling TM5 to PISCES and LPJ-GUESS, respectively (see Sect. 3.3). An
important feature of the model is that the transport in TM5 is mass-conserving (Krol et al., 2005). For the simulation of CH<inline-formula><mml:math id="M170" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>, a version of
TM5 that includes atmospheric chemistry and aerosols is used (van Noije et
al., 2021). A recent description of the chemistry scheme applied in EC-Earth
has been presented by Williams et al. (2017). Emissions of aerosols and
chemically reactive gases are taken from the CMIP6 historical datasets for
anthropogenic sources (Hoesly et al., 2018) and biomass burning (van Marle
et al., 2017) or the corresponding CMIP6 scenario datasets (Gidden et al.,
2019). To force the CH<inline-formula><mml:math id="M171" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> simulation to follow the pathway provided by
CMIP6, its surface mixing ratios are nudged towards the monthly zonal means
from CMIP6 interpolated to daily values. Moreover, because TM5 lacks a
comprehensive stratospheric chemistry scheme, the CH<inline-formula><mml:math id="M172" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> mixing ratios in
the stratosphere are nudged towards a monthly zonal mean observational
climatology representative for the 1990s (interpolated to daily values),
scaled by a global factor based on the CMIP6 time series of global annual
mean surface values. To calculate the scale factor, we assume a 1-year
delay between the mixing ratios at the surface and in the stratosphere
(Meinshausen et al., 2017) and a reference value based on a 10-year
average.</p>
      <p id="d1e4638">The chemical production of water vapor (H<inline-formula><mml:math id="M173" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O) by oxidation of methane
in the stratosphere is included in IFS in a similar way as in the standard
version of IFS. The assumption made in the standard version of IFS is that
            <disp-formula id="Ch1.E2" content-type="numbered"><label>2</label><mml:math id="M174" display="block"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:mo>[</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow><mml:mo>]</mml:mo><mml:mo>+</mml:mo><mml:mo>[</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow><mml:mo>]</mml:mo><mml:mo>=</mml:mo><mml:mrow class="chem"><mml:mi mathvariant="normal">Co</mml:mi></mml:mrow><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where square brackets denote local mixing ratios (in ppmv) and the constant
is set to 6.8 ppmv based on observations for the present day. To account for
long-term variations in CH<inline-formula><mml:math id="M175" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>, in EC-Earth it is assumed instead that
            <disp-formula id="Ch1.E3" content-type="numbered"><label>3</label><mml:math id="M176" display="block"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>[</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow><mml:mo>]</mml:mo><mml:mo>+</mml:mo><mml:mo>[</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow><mml:mo>]</mml:mo><mml:mo>=</mml:mo><mml:mi>C</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where
            <disp-formula id="Ch1.E4" content-type="numbered"><label>4</label><mml:math id="M177" display="block"><mml:mrow><mml:mi>C</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mrow class="chem"><mml:mi mathvariant="normal">Co</mml:mi></mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>(</mml:mo><mml:mo>[</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow><mml:mo>]</mml:mo><mml:mi>S</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mo>[</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow><mml:mo>]</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          Here [CH<inline-formula><mml:math id="M178" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>]<inline-formula><mml:math id="M179" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula>(<inline-formula><mml:math id="M180" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>)  is the monthly varying global mean surface mixing ratio
obtained by linear interpolation from the CMIP6 time series of annual
values, and [CH<inline-formula><mml:math id="M181" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>]0<inline-formula><mml:math id="M182" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> is a reference value for the present day, which is set
to 1.78 ppmv.</p>
      <p id="d1e4851">Ozone is simulated by TM5. As for CH<inline-formula><mml:math id="M183" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>, TM5 applies a nudging scheme for
O<inline-formula><mml:math id="M184" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> in the stratosphere. In EC-Earth3, the mixing ratios are nudged
towards daily zonal means obtained from the CMIP6 dataset.</p>
      <p id="d1e4873">For aqueous-phase chemistry in the troposphere, the acidity of cloud
droplets is calculated assuming a uniform CO<inline-formula><mml:math id="M185" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> mixing ratio following
the CMIP6 time series of annual global mean surface values.</p>
      <p id="d1e4885">TM5 simulates tropospheric aerosols, namely sulfate, black carbon, primary
and secondary organic aerosol, sea salt, and mineral dust, in four size ranges
describing nucleation, Aitken, accumulation, and coarse modes using the M7
aerosol microphysical model (Vignati et al., 2004). In addition, it
simulates the total mass of ammonium, nitrate, and methane sulfonic acid
(MSA). Optical properties of the aerosol mixture are calculated based on Mie
theory in combination with the mixing assumptions described by van Noije et al. (2014).</p>
      <p id="d1e4888">For calculation of the SW radiative effects of the aerosol mixture, TM5
provides the extinction, single-scattering albedo, and asymmetry factor at
the 14 wavelength bands of the SW radiation scheme (using the same
wavelength values as in MACv2-SP). In addition, TM5 provides the particle
number and component mass mixing ratios for each of the M7 modes, plus the
total mass mixing ratios of nitrate and MSA. LW absorption is calculated
based on the mass mixing ratios of the M7 components using absorption
efficiencies from IFS. The contribution of the aerosol mixture described by
MACv2-SP and/or TM5 to SW extinction and LW absorption is removed above the
tropopause, where the stratospheric aerosol dataset from CMIP6 is applied.
The tropopause level is diagnosed online following the thermal tropopause
definition of the World Meteorological Organization (WMO, 1957), as detailed
by Reichler et al. (2003). Where the thermal tropopause does not exist
according to this definition, tropospheric and stratospheric aerosols are
merged at the 100 hPa level.</p>
</sec>
<sec id="Ch1.S3.SS5">
  <label>3.5</label><title>Ocean</title>
      <p id="d1e4900">The ocean component of the EC-Earth model is the Nucleus for European
Modelling of the Ocean (NEMO; Madec and the NEMO team,  2008; Madec et al., 2015) that includes
the ocean model OPA (Océan Parallélisé), the LIM3 sea ice model
(see Sect. 3.6), and the PISCES biogeochemistry model (see Sect. 3.7).
The CMIP6 version of the EC-Earth model uses NEMO3.6 (revision r9466) in
combination with the ORCA1 shared configuration (regular ORCA1, not eORCA1).</p>
      <p id="d1e4903">OPA is a primitive equation model of ocean circulation. Prognostic variables
are velocity, hydrostatic pressure, sea surface height, and thermohaline
variables (potential temperature and salinity). The distribution of
variables is given by a three-dimensional Arakawa-C-type grid (Arakawa and
Lamb, 1977). OPA uses a partial step implementation for the geopotential
<inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:msup><mml:mi>z</mml:mi><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> coordinate (grid boxes do not continue below topography) and a diffusive
bottom boundary layer scheme (similar to that of Beckmann and Döscher,
1997) with implicit bottom friction to mix dense water down a slope.</p>
      <p id="d1e4917">NEMO allows for various choices for the physical sub-grid-scale
parameterizations as well as the numerical algorithms. EC-Earth uses the
turbulent kinetic energy (TKE) scheme for vertical mixing. The vertical eddy
viscosity and diffusivity coefficients are computed from a 1.5 turbulent
closure model based on a prognostic equation for the turbulent kinetic
energy and a closure assumption for the turbulent length scales. This
turbulence closure model has been developed by Bougeault and Lacarrère
(1989) in atmospheric cases, adapted by Gaspar et al. (1990) for oceanic
cases, and embedded in OPA by Blanke and Delecluse (1993).</p>
      <p id="d1e4920">Since the CMIP5 version of EC-Earth, major changes in the TKE schemes have
been implemented: it now includes a Langmuir cell parameterization (Axell,
2002), the Mellor and Blumberg (2004) surface wave breaking
parameterization, and  a time discretization which is energetically
consistent with the ocean model equations (Burchard, 2002; Marsaleix et al., 2008). A mixed layer eddy parameterization following Fox-Kemper et al. (2008) has been newly implemented in NEMO3.6. An enhanced vertical diffusion
and a double diffusive mixing parameterization are part of the OPA code in
EC-Earth. Since CMIP5, a tidal mixing parameterization has been added to OPA
(de Lavergne et al., 2020).</p>
      <p id="d1e4924">Horizontal tracer diffusion is described by the Gent–McWilliams (Gent and
McWilliams, 1990) parametrization of mesoscale eddy-induced turbulence.</p>
      <p id="d1e4927">The ORCA family is a series of global ocean grid configurations. The ORCA
grid is a tripolar grid  based on the semi-analytical method of Madec and
Imbard (1996). ORCA1 with a resolution of about 1<inline-formula><mml:math id="M187" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> is used for
standard- or low-resolution simulations, and ORCA025 (resolution 0.25<inline-formula><mml:math id="M188" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>) is used
for high-resolution simulations with EC-Earth3-HR. A meridional grid
refinement of <inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> in the tropics allows a partial representation of
tropical instability waves. There are 75 vertical levels in the ocean with
an upper level of about 1 m and 24 levels distributed over the uppermost
100 m.</p>
      <p id="d1e4964">The main difference of the OPA version used in EC-Earth compared to the
reference OPA version of NEMO3.6 is that the parameterization of the
penetration of TKE below the mixed layer due to internal and inertial waves
is switched off (nn_etau <inline-formula><mml:math id="M190" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0). This has been done because the
penetration of TKE below the mixed layer caused a surface layer of
warm summer water masses in the North Atlantic convection areas that is too deep, which leads
to a breakdown of the Labrador Sea convection within a few years and a
strongly underestimated Atlantic Meridional Overturning Circulation (AMOC)
in EC-Earth. A minor modification compared to the standard NEMO setup from
the ORCA1-shared configuration for NEMO (ShacoNemo) is an increased tuning
parameter rn_lc (0.2) in the TKE turbulent closure scheme
that directly relates to the vertical velocity profile of the Langmuir cell
circulation. Consequently, the Langmuir cell circulation is strengthened.</p>
</sec>
<sec id="Ch1.S3.SS6">
  <label>3.6</label><title>Sea ice</title>
      <p id="d1e4982">The sea ice component is version 3.6 of the Louvain-la-Neuve Ice Model (LIM;
Vancoppenolle et al., 2009; Rousset et al., 2015), which works directly on
the NEMO environment, including the ORCA grid. LIM3.6 is based on the Arctic
Ice Dynamics Joint EXperiment (AIDJEX) framework (Coon et al., 1974),
combining the ice thickness distribution (ITD) framework, the conservation
of horizontal momentum, an elastic–viscous–plastic rheology, and
energy-conserving halo-thermodynamics (Vancoppenolle et al., 2009). All of
these components of the sea ice model have been introduced or revised since
CMIP5.</p>
      <p id="d1e4985">The ice thickness distribution framework was introduced (Thorndike et al.,
1975) to deal with meter-scale variations in ice thickness, which cannot be
resolved explicitly but should preferably be accounted for, as many sea ice
processes, in particular growth and melt, depend nonlinearly on thickness
<inline-formula><mml:math id="M191" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula>. In practice, this is achieved by treating <inline-formula><mml:math id="M192" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula> as an independent variable,
leading to the introduction in discrete form of <inline-formula><mml:math id="M193" display="inline"><mml:mrow><mml:mi>L</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> thickness categories,
each characterized by a specific set of state variables (namely ice
concentration, ice volume per unit area, snow volume per unit area, ice
enthalpy, snow enthalpy, sea ice salt content). Ice and snow enthalpy also
depend on vertical depth in the ice (<inline-formula><mml:math id="M194" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>). All sea ice state variables <inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:msub><mml:mi>X</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mi>l</mml:mi></mml:mrow></mml:msub><mml:mo>,</mml:mo><mml:mi>l</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>L</mml:mi></mml:mrow></mml:math></inline-formula>  are
updated due to transport and thermodynamic processes. The default choice of
five categories, with the upper category above 4 m, has been shown to
provide reasonable results at an acceptable computing cost (Massonnet et
al., 2019).</p>
      <p id="d1e5053">Vertical sea ice motions are irrelevantly small and hence neglected, and the
sea ice velocity field reduces to its horizontal components. The 2D ice
velocity vector is considered the same for all categories and stems from the
horizontal momentum conservation equation. The internal stress term is
formulated assuming that sea ice is a viscous–plastic material, i.e.,
assuming viscous ice flow at very small deformation and plastic flow (stress
independent of deformation) above a plastic failure threshold. This
threshold lies on an elliptical yield curve in the principal stress
component space, whose size can be changed by tuning the classical ice strength
parameter <inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:msup><mml:mi>P</mml:mi><mml:mo>*</mml:mo></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> 000 following the classical formulation of Hibler (1979). The horizontal momentum equation is resolved using the
elastic–viscous–plastic (EVP) C-grid formulation of Bouillon et al. (2009)
using 120 sub-time steps. Once the velocity field is computed, the sea ice
state variables are transported horizontally using the second-order
moment-conserving scheme of Prather (1986).</p>
      <p id="d1e5071">Ice thermodynamics are based on the Bitz and Lipscomb (1999) enthalpy
formulation and account for dynamic changes in ice salinity through
temperature- and salinity-dependent thermal properties (Ono, 1968; Pringle et
al., 2007). The salt entrapment and drainage parameterizations follow from
Vancoppenolle et al. (2009): each category is characterized by a dynamic
mean salinity, from which a profile shape is derived for the computation of
the vertical diffusion of heat. The broadband surface albedo of each ice
category empirically depends on ice thickness, snow depth, surface
temperature, and cloud fraction based on a reformulation of the Shine and
Henderson-Sellers (1985) parameterization that solves a few inconsistencies
associated with state transitions (e.g., snow/no snow), following Grenfell
and Perovich (2004), and is tuned to match observations of Brandt et al. (2005). The impact of melt ponds is implicitly accounted for through imposed
changes on the albedo activated when the surface temperature is 0 <inline-formula><mml:math id="M197" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C. Energy, salt, and mass conservations have been carefully checked within
the ice component and its interfaces with the atmosphere and ocean (Rousset
et al., 2015).</p>
      <p id="d1e5084">All surface fluxes are computed in the atmosphere, and the IFS atmospheric
model has only one ice thickness category. The solar and non-solar heat
fluxes are therefore distributed on the different sea ice categories in
LIM3, taking into account the differences in albedo and temperature among
the sea ice categories in each grid point.</p>
      <p id="d1e5087">During the tuning phase it was found that the Arctic sea ice volume grew to
unrealistically high values, especially during phases with reduced AMOC. An
analysis showed that the thermal conductivity of snow needed a slight
reduction (rn_cdsn <inline-formula><mml:math id="M198" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.27) to reduce basal growth and
increase bottom melt (see also Sect. 2).</p>
</sec>
<sec id="Ch1.S3.SS7">
  <label>3.7</label><title>Ocean biogeochemistry</title>
      <p id="d1e5105">PISCES-v2 (Pelagic Interactions Scheme for Carbon and Ecosystem Studies
volume 2) is a biogeochemical model that simulates the nutrient cycle and
the inorganic and organic carbon cycle, and it comprises lower trophic
phytoplankton and zooplankton (Aumont et al., 2015). It has two functional
groups for phytoplankton (nanophytoplankton, including calcite producers,
and diatoms that can produce siliceous shells) and two size classes for
zooplankton (mesozooplankton and microzooplankton). The growth rate of
phytoplankton depends on photosynthetically available radiation (PAR) intensity
and temperature. A limitation for primary production is computed based on
the availability of the main nutrients (P, N, Si, Fe). In the case of low
nitrate concentrations, nitrogen fixation by diazotrophic cyanobacteria is
parameterized in waters warmer than 20 <inline-formula><mml:math id="M199" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (Aumont et al., 2015).
PISCES uses a constant P <inline-formula><mml:math id="M200" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> N <inline-formula><mml:math id="M201" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> C ratio of <inline-formula><mml:math id="M202" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">16</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">122</mml:mn></mml:mrow></mml:math></inline-formula> for primary production.
Organic particulate matter produced by food-web processes in the euphotic
layer is represented by two size classes. These sink throughout the water
column with different velocities while being decomposed into dissolved
inorganic nutrients (DIN, DOP) and dissolved inorganic carbon (DIC). A
further pool for dissolved organic matter (DOM) is fed by phytoplanktonic
exudation and excretion by zooplankton. DOM in PISCES represents only the
semi-labile fraction, with turnover times ranging from months to years, and it
is further remineralized at a constant rate. PISCES includes two different
chemistry models to describe iron pool interactions. In EC-Earth3 we use
the complex model by Tagliabue and Arrigo (2006). The global river and
atmospheric deposition input of nutrients are not balanced to match the
fraction lost by sediment burial. For this reason, PISCES allows for a
homogeneous correction towards global mean values for alkalinity, nitrate,
phosphate, and silicate. Furthermore, physical transport of passive tracers
presented a slight artificial mass imbalance. To prevent it from becoming
significant for carbon during the spin-up we applied a uniform correction to
dissolved inorganic carbon at the end of each year after taking into
account all sources and sinks.</p>
      <p id="d1e5147">With respect to climate studies PISCES is capable of simulating the relevant
processes of the marine carbon cycle; i.e., it comprises the soft-tissue
carbon pump and the carbonate counter-pump to realistically simulate the
feedback of the marine carbon cycle to the climate.</p>
      <p id="d1e5150">The air–sea gas exchange for carbon dioxide and oxygen is parameterized
according to Wanninkhof (1992). The interface to the seafloor is given by
basic assumptions for the exchange between the active sediment layer and the
water bottom layer where different assumptions are made for the burial
efficiency for silicate, calcite, and particular organic matter (see Aumont
et al., 2015, for further details).</p>
      <p id="d1e5153">PISCES is part of the community model NEMO and runs on the same model grid.
In EC-Earth3 the horizontal resolution is about 1<inline-formula><mml:math id="M203" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> (ORCA1) with 75
vertical levels. Advection and diffusion of the 24 biogeochemical tracers are
done in the hydrodynamic ocean model. A detailed description of the PISCES
reference version is given in Aumont et al. (2015). In EC-Earth3 PISCES can
be run in passive mode or with feedback to the atmosphere by prognostically
simulating air–sea carbon fluxes and contributing to determining atmospheric
<inline-formula><mml:math id="M204" display="inline"><mml:mrow class="chem"><mml:mi>p</mml:mi><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> when the global carbon cycle is fully closed in the case that the
atmospheric chemistry model TM5 and the terrestrial biosphere model
LPJ-GUESS are also enabled. A feedback to the ocean physics is not foreseen;
i.e., the thermal effect of light absorption by chlorophyll on water
temperature is not communicated to NEMO (although possible).</p>
</sec>
<sec id="Ch1.S3.SS8">
  <label>3.8</label><title>Greenland Ice Sheet</title>
      <p id="d1e5186">The Parallel Ice Sheet Model v1.1 (PISM; Bueler and Brown, 2009;
Winkelmann et al., 2011; The PISM Team, 2019) is used in the EC-Earth3-GrIS
configuration to model the Greenland Ice Sheet (GrIS) evolution in the
climate system. PISM is an open-source model jointly developed by a group of
universities available from <uri>http://www.pism-docs.org</uri> (last access: 18 March 2022). While all
surface processes over an ice sheet (such as the snow layer) are modeled in
EC-Earth3, PISM handles the ice sheet dynamical and thermodynamical
processes, including ice flow, subglacial hydrology, bed deformation, and the basal ice melt.</p>
      <p id="d1e5192">The spatial domain of PISM is built on a three-dimensional, equidistant
polar stereographic grid. The equations are solved with an adaptive time
stepping procedure. Boundary conditions include subsurface temperature and
mass balance on the ice surface (provided by EC-Earth3), bedrock elevation,
and bed geothermal heat flux (considered to be invariant geographic
conditions).</p>
      <p id="d1e5195">PISM considers the ice sheets as a slow, nonlinearly viscous isotropic
fluid characterized by a creeping flow induced by gravitational forces and
constrained by the conservation laws of momentum, mass, and energy for ice. A
combination of two shallow ice approximations, the non-sliding shallow ice
(SIA) and the shallow shelf (SSA) approximations, is applied, depending on
the ice regime (Bueler and Brown, 2009). The former is applied to bed-frozen
parts of the ice sheets, while the latter is applied to ice shelves and
also used as a sliding law in areas with low basal resistance. This hybrid
formulation enables the modeling of fast-flowing ice streams and outlet
glaciers and is commonly used for simulations of whole ice sheets for which
it is too expensive to solve the full set of stress balance equations.</p>
      <p id="d1e5198">The ice velocities are determined from geometry (i.e., ice thickness and ice
surface elevation), ice temperature, and basal strength using momentum–stress
balance equations. The ice thermodynamics are formulated as the energy
balance based on enthalpy that enables solutions for polythermal ice masses
(Ashwanden et al., 2012) and the Glen–Paterson–Budd–Lliboutry–Duval flow law
(Lliboutry et al., 1985) that accounts for softening of the ice as the liquid
water fraction increases. The ice flow law is a single power law in which
the exponent can be selected independently for the SIA and SSA. Furthermore,
an enhancement factor is used to account for the anisotropic nature of the
ice.</p>
      <p id="d1e5202">The subglacial processes are resolved by the sliding law that relates the
basal sliding velocity to the basal shear stress. PISM uses a pseudo-plastic
sliding law and the Mohr–Coulomb model for yield stress that depends on the
till friction angle and the effective pressure of the saturated till. The
latter is based on a subglacial routing scheme, and the basal melt rate is
calculated from energy conservation across the ice–bedrock layer. A
geothermal heat flux map is applied at the basal boundary to account for the
heat entering the ice sheet from below. Ice bed deformation is approximated
by the viscoelastic deformable Earth model formulated in Bueler et al. (2007).</p>
      <p id="d1e5205">Calving of marine-terminating glaciers at the ocean boundary is
parameterized in PISM as the model does not have a good representation of
the narrow fjord systems of the marine outlet at the considered resolution.
Several calving schemes are implemented in PISM to cope with different
conditions, including eigencalving, von Mises calving, thickness
calving, and flow-kill calving. A commonly used calving scheme for GrIS
is adapted from the von Mises yield criterion, which is suited for ice flows
confined in narrow valleys and fjords (Morlighem et al., 2016). The
parameterization assesses the calving speed from the amount of ice
fracturing.</p>
</sec>
<sec id="Ch1.S3.SS9">
  <label>3.9</label><title>Lake treatment</title>
      <p id="d1e5216">EC-Earth3 has no explicit lake model. All grid points in the atmosphere model
that are covered with less than 50 % water in the land–sea mask are
assumed to be land and use the HTESSEL scheme as described above. Grid
points with more than 50 % water are considered water, and the water
temperature, sea ice cover, and sea ice temperature in these points are
updated by the coupler. This process is straightforward for grid points over
the ocean, but for inland water bodies such as large lakes this implies an
extrapolation of temperature, for example, from the nearest unmasked grid point in the
ocean model. This method potentially leads to problems in lakes where the
closest ocean point is much further north such as the Great Lakes for which
the closest ocean point is the Hudson Bay. This constellation implies colder
lakes and longer sea ice cover, which has an impact on the local climate
(e.g., lake breeze) around these lakes.</p>
</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Procedures to test possible model climate dependencies on computing
platform, compilers, and domain decomposition</title>
      <p id="d1e5228">EC-Earth3 runs under different high-performance computing (HPC) environments
in the EC-Earth partner supercomputing centers. This has several advantages,
from allowing different groups to work with the same tool in parallel to
leveraging the burden of ensemble climate simulations. However, for obvious
scientific reasons, it is critical to ensure that ESMs provide replicable
results under changes in the computing environment. While bit-for-bit
replicability is in general infeasible because of the existence of
hardware and software constraints that are beyond the control of climate
researchers, it must be expected that results obtained under one computing
environment are statistically indistinguishable from those obtained under
another environment.</p>
      <p id="d1e5231">EC-Earth as a community has developed a protocol (Massonnet et al., 2018,
2020) to assess replicability for the EC-Earth3 model system. This
protocol is based on a statistical comparison of standard climate metrics
derived from control integrations executed in different HPC environments.
This protocol has been tested with EC-Earth 3.2, allowing judgment of
replicability of EC-Earth 3.2 results. It was also shown that the interim
version of the model, EC-Earth 3.1 (developed  between CMIP5 and
CMIP6), was not fully replicable. The experience gained (Massonnet et al.,
2020) suggested that codes (especially when they are bugged) interfere with
computing environments in sometimes unpredictable ways. The default
assumption in EC-Earth is that a given model simulation is <italic>not</italic> replicable when
the HPC environment is changed until proven otherwise, i.e., that the model
executed in the two computing environments gives results that cannot be
deemed incompatible. The protocol developed within EC-Earth fulfills this
goal, and it is now required to check the replicability of EC-Earth each
time it is ported to a new machine before new production runs can be
started in this machine.</p><?xmltex \setfigures?><?xmltex \setboxes?><?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Box}?><label>Box 1</label><caption><p id="d1e5240">The protocol for testing replicability.</p></caption>
        <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-b01.png"/>

      </fig>

      <p id="d1e5250">Replicability is a cornerstone of science and, by extension,  climate
research. Testing whether climate models provide replicable output under
changes in HPC environments is a prerequisite to ensure trusted distribution
of large ensembles across multiple platforms, which were foreseen within the
EC-Earth community. The workload of CMIP6 experiments was shared and run in
collaboration by different institutions of the consortium across different
platforms.</p>
      <p id="d1e5253">Here we give an example for an application of the replicability test. It
consists of the executions of the same code in coupled (CMIP) and atmosphere-only configurations (AMIP), with five ensemble members, carried out by
different institutions using their respective platforms. In essence, this
test (see Box 1) assesses the differences due to the varying HPC environment
in 20-year simulations after accounting for internal variability.</p>
      <p id="d1e5256">The performance indices by Reichler and Kim (2008) (RandK), which compare
model performance against the reanalysis product ERA40, were calculated
using the EC-Earth analysis tool EC-mean, which is available in the model source
tree. The tests included six different machines (Tetralith, Rhino,
Marenostrum4, CCA, Sisu – Finnish IT Center for Science, Hpcdev – CRAY XT-5,
and Kay), two different compilers (Intel and Cray), different domain
decomposition (number of parallel resources used), and different versions of
libraries and compilers used (subject to the availability of each platform).</p>
      <p id="d1e5259">The results of this test showed that the climates simulated by EC-Earth were
statistically indistinguishable in most of the cases. The differences were
evaluated for 13 different variables (Table 14) with similar results for all
variables and vertical levels. An example for 2 m temperature (t2m) is shown
in Fig. 2 for the HPC systems Rhino and CCA. Both the AMIP and CMIP
experiments return similar mean values when averaged spatially (Fig. 2a
and b, respectively). Figure 2c also shows that the results at the end of
the execution (20 years) are statistically similar in spite of the internal
variability; only 1.2 % of the total results could be considered
significantly different (under the null hypothesis of no difference,
significant differences are expected to occur 5 % of the time). Similar
results were obtained for the remaining comparison of HPC systems, except
for two integrations which failed this test. These failures were traced back
to the specific compiler versions used. Using a different setup (with a
different version of the compilers) removed the differences, thus proving
that the replicability test can be used to highlight incorrect
configurations.
<?xmltex \setfigures?></p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{2}?><?xmltex \def\figurename{Figure}?><label>Figure 2</label><caption><p id="d1e5265">Comparison between Rhino and CCA platforms for AMIP experiments
and historical CMIP experiments for 2 m temperature (t2m). Panels <bold>(a)</bold> and <bold>(b)</bold>
show mean (solid line) as well as maximum and minimum values (dashed lines) between the
ensemble members for AMIP <bold>(a)</bold> and CMIP <bold>(b)</bold> experiments, respectively. Green
and orange refer to Rhino and CCA platforms, respectively. Panel <bold>(c)</bold>
shows the t2m difference between the CMIP ensemble runs. Black dotted
regions indicate statistical significance according to the
Kolmogorov–Smirnov test (1.2 % of grid points show a significant
difference in this case).</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f02.png"/>

      </fig>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T14"><?xmltex \currentcnt{14}?><label>Table 14</label><caption><p id="d1e5293">Difference in the 20-year mean and ensemble mean near-surface values for different variables between the Rhino and CCA platform experiments.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Variable</oasis:entry>
         <oasis:entry colname="col2">Description</oasis:entry>
         <oasis:entry colname="col3">Spatial mean</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">differences (%)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">t2m</oasis:entry>
         <oasis:entry colname="col2">2 m air temperature</oasis:entry>
         <oasis:entry colname="col3">1.2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">msl</oasis:entry>
         <oasis:entry colname="col2">Mean sea level pressure</oasis:entry>
         <oasis:entry colname="col3">0.7</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">qnet</oasis:entry>
         <oasis:entry colname="col2">Net thermal radiation</oasis:entry>
         <oasis:entry colname="col3">0.8</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">tp</oasis:entry>
         <oasis:entry colname="col2">Total precipitation</oasis:entry>
         <oasis:entry colname="col3">1.4</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ewss</oasis:entry>
         <oasis:entry colname="col2">Zonal wind stresses</oasis:entry>
         <oasis:entry colname="col3">1.1</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">nsss</oasis:entry>
         <oasis:entry colname="col2">Meridional wind stress</oasis:entry>
         <oasis:entry colname="col3">1.3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SST</oasis:entry>
         <oasis:entry colname="col2">Sea surface temperature</oasis:entry>
         <oasis:entry colname="col3">0.7</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SSS</oasis:entry>
         <oasis:entry colname="col2">Sea surface salinity</oasis:entry>
         <oasis:entry colname="col3">0.8</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SICE</oasis:entry>
         <oasis:entry colname="col2">Sea ice concentration</oasis:entry>
         <oasis:entry colname="col3">1.1</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M205" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">3D air temperature</oasis:entry>
         <oasis:entry colname="col3">1.3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M206" display="inline"><mml:mi>U</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">3D zonal wind</oasis:entry>
         <oasis:entry colname="col3">1.5</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M207" display="inline"><mml:mi>V</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">3D meridional wind</oasis:entry>
         <oasis:entry colname="col3">1.2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M208" display="inline"><mml:mi>Q</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Specific humidity</oasis:entry>
         <oasis:entry colname="col3">0.7</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S5">
  <label>5</label><title>Climate conditions as simulated in historical ensembles</title>
      <p id="d1e5522">To illustrate the performance of the EC-Earth3 model we present results from
the ensemble of historical experiments. The forcing of the historical
experiments follows the CMIP6 protocol and has been described in detail in
Sect. 3. After tuning the coupled configurations EC-Earth3 and
EC-Earth3-Veg, spin-up and piControl (pre-industrial control) simulations
have been carried out. PiControl simulations for other model configurations
have been carried out but will not be used in this paper.</p>
      <p id="d1e5525">Each ensemble member of the historical experiment was branched off from the
corresponding piControl experiment at a different time, with branching
times separated by intervals of 20 years (Fig. 3). The complete
information about the branch time of each member is included in the metadata
on all variables. Separate piControl experiments have been produced for
EC-Earth3 and EC-Earth3-Veg, and more will follow for other model
configurations. Most of the results presented here are based on the
20-member large ensemble of the EC-Earth3 configuration that were available
from the ESGF at the time of writing. The results from four available
EC-Earth3-Veg members were found to be very similar, and therefore we focus
on the analysis of results from EC-Earth3.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><?xmltex \currentcnt{3}?><?xmltex \def\figurename{Figure}?><label>Figure 3</label><caption><p id="d1e5530">Time series of the global mean of annual mean near-surface temperature
(TAS) in the 500-year-long EC-Earth3 piControl experiment. The thick blue line
is an 11-year running average of the annual means. The time axis is arbitrary
because of constant forcing. Red circles mark the initial states from which
the members of the historical experiment are started. The
realization_id of the members of the historical ensemble
is shown at the bottom of the figure.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f03.png"/>

      </fig>

<sec id="Ch1.S5.SS1">
  <label>5.1</label><title>Temperature</title>
      <p id="d1e5547">The time series of the global annual mean near-surface air temperature (TAS)
is shown in Fig. 4. Reanalysis data from ERA5 and ERA-20C are shown for
comparison. Compared to ERA5 the model ensemble has a warm bias of about 0.5 K in the global mean. ERA5 can be considered more relevant for the global
mean TAS in comparison with ERA-20C because ERA5 has stronger observational
constraints and updated physical parameterization in the underlying global
model, while ERA-20C is limited to assimilation of daily surface pressure and
surface winds over the ocean (Poli et al., 2016).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{4}?><?xmltex \def\figurename{Figure}?><label>Figure 4</label><caption><p id="d1e5552">Global annual mean TAS (in K) from the EC-Earth2.3 (red, for CMIP5)
and EC-Earth3 (blue, for CMIP6) ensembles for <bold>(a)</bold> global mean, <bold>(b)</bold> land
only, and <bold>(c)</bold> ocean only. Ensemble means are shown as thick lines, and the
ensemble spread is shown as a shaded area. Global annual mean TAS from the
ERA5 (black, solid) and ERA-20C (black, dashed) reanalyses is shown for
comparison.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f04.png"/>

        </fig>

      <p id="d1e5570">The bias in the EC-Earth3 global mean TAS is mainly due to a warmer ocean
and especially due to a strong warm bias in the Southern Ocean, as we will
show below. Another feature is the large ensemble spread shown as a shaded
area around the ensemble mean. The difference between the coldest and
warmest ensemble member is 0.8 K on average. For further comparison, the
CMIP5 ensemble of EC-Earth2.3 is also shown, which is about 1.2 K colder and
indicates a smaller spread among the 10 members in comparison to the
current 20-member ensemble. When analyzing the long piControl run we found
that the EC-Earth3 model oscillates between two states that are
characterized by low or high values of the AMOC, cold or  warm North Atlantic
temperatures, and more or less sea ice in the Arctic, with a period of about 200 years. The temperature difference over the North Atlantic is large enough to
have a discernible impact on the global mean TAS, resulting in a warm and a
cold state. The model can remain in either of these states for several
decades before turning to the other state, with transitions occurring at
irregular intervals. We speculate here that the oscillation decreases with
the warming climate. This is indicated by a larger ensemble of historical
and scenario simulations than shown here. The exact processes as well as the
triggers for the oscillation are still under investigation on the basis of
the larger ensemble and will be presented in a later study. However, it is
already clear that the large differences between the warmest and coldest
member of the ensemble of historical simulations are related to the two
states of the model climate, i.e., whether the initial states for the
historical run stem from the cold or warm phase of the piControl run, and
that transitions between different states occur during the historical
simulation.</p>
      <p id="d1e5574">The TAS trend after 1980 is found to be stronger in the EC-Earth3 ensemble
mean (0.25 K per decade) than in the ERA5 reanalysis (0.18 K per decade). However,
when looking at the warming during the entire historical period by comparing
the mean TAS from 1851–1880 against 1981–2010 we find that the model warmed
by 0.7 K, which is only slightly higher than the 0.63 K estimate for the
observed warming (IPCC; Hoegh-Guldberg et al., 2018)</p>
      <p id="d1e5577">To study the EC-Earth3 recent past climate we focus on the period 1980–2010.
The ensemble mean spatial TAS is compared to ERA5 for this period in Fig. 5. We find cold TAS biases over the land regions and the Arctic and warm
biases over the Southern Ocean and Antarctica as well as for the
stratocumulus regions of the continents (Fig. 5b). The individual member
biases have a large spread in the Northern Hemisphere as previously
mentioned, while the Southern Hemisphere biases are similar for all members
as seen in the zonal mean bias plot (Fig. 5d). The CMIP5 ensemble
EC-Earth2.3 is colder than ERA5 except over the Southern Ocean (Fig. 5c),
and the spread is much smaller than for EC-Earth3 (Fig. 5d).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><?xmltex \currentcnt{5}?><?xmltex \def\figurename{Figure}?><label>Figure 5</label><caption><p id="d1e5582"><bold>(a)</bold> ERA5 1980–2010 mean TAS (in <inline-formula><mml:math id="M209" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C); <bold>(b)</bold> EC-Earth3 and
<bold>(c)</bold> EC-Earth2.3 ensemble mean biases compared to ERA5 (<inline-formula><mml:math id="M210" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>); <bold>(d)</bold> zonal
annual mean TAS from the EC-Earth2.3 (blue, CMIP5) and EC-Earth3 (red, CMIP6)
ensembles.</p></caption>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f05.png"/>

        </fig>

      <p id="d1e5620">Most coupled climate models suffer from a warm Southern Ocean (SO) bias
(Hyder et al., 2018). In EC-Earth3 configurations, the warm bias is found in
all seasons. Large parts of the bias have been attributed to biases in shortwave cloud radiative effects. Modifications in the cloud scheme and the
representation of supercooled liquid water made in more recent versions of
IFS, including cycle 45r1 (Forbes and Ahlgrimm, 2014; Forbes et al., 2016),
together with the introduction of the new ecRad radiation scheme in cycle
43r3 (Hogan et al., 2017), have been shown to substantially reduce these
biases.</p>
</sec>
</sec>
<sec id="Ch1.S6">
  <label>6</label><title>Precipitation</title>
      <p id="d1e5632">Global mean precipitation (pr) patterns are well represented in EC-Earth3 in
comparison with ERA5 for present-day conditions (Fig. 6), except for the
double Intertropical Convergence Zone (ITCZ) pattern noticeable as a
distinct peak in the zonal mean pr at 9<inline-formula><mml:math id="M211" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S. This is a persistent
model bias common to most global climate models. The largest pr biases
relative to the observational dataset Global Precipitation Climatology
Project (GPCP; Gehne et al., 2016) are found in the tropics, in particular in
the Southern Hemisphere (SH) and to a lesser extent in the Northern
Hemisphere (NH). EC-Earth3 precipitation is closer to ERA5 but has less
precipitation at the Equator. The overestimation of pr by the model in the
SH and the double ITCZ are likely consequences of the strong warm
temperature bias over the Southern Ocean that leads to a more southward-displaced tropical rainfall belt and more vigorous hydrological cycle (Hwang
and Frierson, 2013).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><?xmltex \currentcnt{6}?><?xmltex \def\figurename{Figure}?><label>Figure 6</label><caption><p id="d1e5646">Mean precipitation for the period 1980–2010 for ERA5 <bold>(a)</bold>,
precipitation anomaly with respect to ERA5 for EC-Earth3veg <bold>(b)</bold>, and zonal
mean precipitation for ERA5 <bold>(c)</bold> (green), GPCPv2.2 (black), and EC-Earth3veg
ensemble mean (blue).</p></caption>
        <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f06.png"/>

      </fig>

<sec id="Ch1.S6.SS1">
  <label>6.1</label><title>Sea level pressure</title>
      <p id="d1e5671">EC-Earth3 mean sea level pressure (PSL) fields are close to ERA5 as shown in
Fig. 7. The PSL bias of individual members and the ensemble values are
within 1.5 hPa compared to ERA5 except over Antarctica where the pressure is
between 0.5 and 2 hPa too high, while over the Southern Ocean the pressure is
1 hPa too low. The variability, measured as the annual standard deviation,
of EC-Earth3 PSL is very close to ERA5, indicating realistic surface winds
(not shown) and modes of variability as shown later in this section.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><?xmltex \currentcnt{7}?><?xmltex \def\figurename{Figure}?><label>Figure 7</label><caption><p id="d1e5676">Upper panel: mean PSL 1980–2010 (hPa) for ERA5 <bold>(a)</bold> and for the
EC-Earth3 ensemble bias compared to ERA5 <bold>(b)</bold>. Lower panel: interannual standard
deviation (hPa) for ERA5 <bold>(c)</bold> and for the EC-Earth3 ensemble <bold>(d)</bold>.</p></caption>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f07.png"/>

        </fig>

</sec>
<sec id="Ch1.S6.SS2">
  <label>6.2</label><title>Zonal wind</title>
      <p id="d1e5706">An overview of the atmospheric circulation is shown in Fig. 8, where the
yearly averaged biases of the zonal component of wind of EC-Earth2.3 and
EC-Earth3 are assessed against ERA5. Zonal averages (Fig. 8a, b) show that
both models are characterized by an underestimation of the Southern
Hemisphere jet, which is larger in the upper troposphere. However, EC-Earth3
shows a reduction of this negative bias compared to EC-Earth2.3.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><?xmltex \currentcnt{8}?><?xmltex \def\figurename{Figure}?><label>Figure 8</label><caption><p id="d1e5711"><bold>(a, b)</bold> Biases (colored shading) of the zonally averaged zonal
component of wind for EC-Earth2.3 <bold>(a)</bold> and EC-Earth3 against ERA5 reanalysis
over the 1980–2010 period. Contours show the ERA5 climatology. <bold>(c, d)</bold> Biases (colored shading) of the 250 hPa zonal component of wind for
EC-Earth2.3 <bold>(a)</bold> and EC-Earth3 against ERA5 reanalysis over the 1980–2010
period. Contours show the ERA5 climatology. Root mean square error, mean
bias, and the number of ensemble members used are reported in each panel.</p></caption>
          <?xmltex \igopts{width=412.564961pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f08.png"/>

        </fig>

      <p id="d1e5731">Similar improvements are seen in the Northern Hemisphere: here EC-Earth2.3
was characterized by a negative bias on the order of <inline-formula><mml:math id="M212" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>5 m s<inline-formula><mml:math id="M213" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the
core of the upper-tropospheric jet stream, while EC-Earth3 shows limited
bias with a slight overestimation on its equatorward side at the tropopause
level.</p>
      <p id="d1e5754">Looking at upper-level zonal wind patterns (Fig. 8c, d) it can be seen that
considerable improvements have been obtained for the Pacific jet, which is strongly
underestimated in EC-Earth2.3 and shows a minor southward bias in
EC-Earth3. Conversely, the North Atlantic jet still shows a poleward
displacement – extending from the western Atlantic up to eastern Europe – of the
same magnitude in both configurations. A southward displacement of the
subtropical jet over Africa also emerges in EC-Earth3.</p>
      <p id="d1e5757">Overall, CMIP6 EC-Earth3 shows a reduction of the bias when compared with
CMIP5 EC-Earth2.3. This is confirmed by smaller figures for both
root mean squared error and mean bias shown in the top of each panel in
Fig. 8. Larger biases in both models are observed when looking at specific
seasons (not shown): EC-Earth3 shows overall smaller biases in DJF and
larger biases in JJA than its CMIP5 predecessor. In general, EC-Earth3 is
characterized by an underestimation of the winter jet and by an
overestimation of the equatorward component of the tropical jet in the
summer hemisphere. An underestimation of the winter stratospheric polar
vortex – stronger in the Southern Hemisphere – is also found.</p>
</sec>
<sec id="Ch1.S6.SS3">
  <label>6.3</label><title>Blocking</title>
      <p id="d1e5768">Atmospheric blocking – the recurrent long-lasting quasi-stationary
high-pressure system developing at the exit of the jet streams in
midlatitudes (Woolings et al., 2018) – is assessed in Fig. 9 for both
EC-Earth2.3 and EC-Earth3 against ERA5 reanalysis. Analysis of blocking is
relevant for climate models considering both (1) the large impact on regional
weather that blocking has in both summer and winter seasons (e.g., Sillmann
et al., 2011; Schaller et al., 2018) and (2) the constant struggle that GCMs
experience in correctly simulating the observed blocking frequencies (e.g.,
Masato et al., 2013; Davini and D'Andrea, 2020). Blocking is shown here as
percentage of blocked days per season following the definition of Davini and
D'Andrea (2020), according to which a bidimensional blocking index based on the reversal
of the geopotential height gradient at 500 hPa is used.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10" specific-use="star"><?xmltex \currentcnt{9}?><?xmltex \def\figurename{Figure}?><label>Figure 9</label><caption><p id="d1e5773">Biases for the blocking frequency according to the Davini and D'Andrea (2020) index for EC-Earth2 <bold>(a, c)</bold> and EC-Earth3 <bold>(b, d)</bold> against ERA5 reanalysis
over the 1980–2010 period. Contours show the ERA5 climatology. Panels <bold>(a)</bold> and <bold>(b)</bold> are
winter, and panels <bold>(c)</bold> and <bold>(d)</bold> are summer. Root mean square error, mean bias, and the
number of ensemble members used are reported in each panel.</p></caption>
          <?xmltex \igopts{width=384.112205pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f09.png"/>

        </fig>

      <p id="d1e5801">Small differences arise from the comparison between EC-Earth2.3 and
EC-Earth3, supported by the negligible changes in root mean squared error
and mean bias reported in each panel. Both models are in line with the CMIP5 and
CMIP6 multi-model mean (see Davini and D'Andrea, 2020). The most evident
improvement is the reduced bias in winter North Pacific blocking in
EC-Earth3 compared to its predecessor. However, both EC-Earth2.3 and
EC-Earth3 show the common underestimation of winter European blocking with
similar magnitude. It is interesting to notice that while in EC-Earth2.3 the
winter European bias is characterized by a north–south dipole probably
associated with an equatorward displacement of the Atlantic eddy-driven jet,
in EC-Earth3 the dipole is located on the east–west axis, suggesting the
presence of a jet that is too penetrative over the European continent (Fig. 9a, b).</p>
      <p id="d1e5805">Larger biases are seen in summer: negligible differences between EC-Earth2.3
and EC-Earth3 are also found, with slightly larger North Pacific and
European blocking biases  observed in EC-Earth3.</p>
</sec>
<sec id="Ch1.S6.SS4">
  <label>6.4</label><title>Sea ice</title>
      <p id="d1e5816">We compare EC-Earth3 historical ensemble mean sea ice variables and spread
to observations and reanalysis datasets.</p>
      <p id="d1e5819">The ensemble mean of EC-Earth3 slightly overestimates the Arctic sea ice
area (Fig. 10), whereby the ensemble spread encases the OSI SAF satellite
observations (Lavergne et al., 2019). The trend in the Arctic sea ice area
over 1980–2014 is captured well by the model during March and September
(Fig. 10).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11" specific-use="star"><?xmltex \currentcnt{10}?><?xmltex \def\figurename{Figure}?><label>Figure 10</label><caption><p id="d1e5824">Time series of Arctic <bold>(a, c)</bold> and Antarctic <bold>(b, d)</bold>
sea ice area for both EC-Earth3 (ensemble mean as thick solid lines) and
satellite observations (OSI SAF as blue dash-dotted lines and NSIDC as
dashed lines). The EC-Earth3 ensemble minimum up to maximum value is
represented by the shading around the ensemble mean.</p></caption>
          <?xmltex \igopts{width=441.017717pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f10.png"/>

        </fig>

      <p id="d1e5840">Interestingly, the modeled summer Arctic sea ice area minimum occurs in
August instead of September as in observations. This result is in agreement
with previous studies using NEMO-LIM forced by atmospheric forcing (Rousset
et al., 2015; Docquier et al., 2017) and several coupled CMIP6 models
including NEMO as an ocean component (Keen et al., 2021). The exact reason
for the minimum sea ice area occurring in August is not clear (Keen et al.,
2021).</p>
      <p id="d1e5843">While the total Arctic sea ice area is captured well by the model, there are
large regional differences in the sea ice concentration between EC-Earth3
and satellite observations (Fig. 11). In March, the model overestimates
the concentration near the ice margins in the Atlantic sector, including the
Labrador, Greenland–Iceland–Norwegian (GIN), and Barents seas, while the
concentration is underestimated by the model in the Bering Sea. In
September, the sea ice concentration is generally overestimated by the model
at the ice margins, with exceptions in the Kara, Laptev, and Chukchi seas,
where the concentration is underestimated.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F12" specific-use="star"><?xmltex \currentcnt{11}?><?xmltex \def\figurename{Figure}?><label>Figure 11</label><caption><p id="d1e5848">Difference in Arctic sea ice concentration in percent between the
ensemble mean of EC-Earth3 and OSI SAF observations in September <bold>(a)</bold> and
March <bold>(b)</bold>, averaged over 1980–2010.</p></caption>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f11.png"/>

        </fig>

      <p id="d1e5863">The total Arctic sea ice volume is higher in the ensemble mean of EC-Earth3
compared to the PIOMAS reanalysis (Fig. 12). The PIOMAS volume is close to
the lower edge of the EC-Earth3 ensemble spread, which is considerably
large, of about <inline-formula><mml:math id="M214" display="inline"><mml:mrow><mml:mn mathvariant="normal">30</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> km<inline-formula><mml:math id="M215" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula> in the 1980s
and 1990s. This is consistent with the Arctic sea ice being generally
thicker in the model compared to PIOMAS (Fig. 13). In September, the
Arctic sea ice is clearly too thick in the model with a bias up to 2 m
compared to PIOMAS. In March, the Arctic sea ice thickness is overestimated
by EC-Earth3 in the central Arctic, while in the Bering and Karas seas the
thickness is lower compared to PIOMAS.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F13" specific-use="star"><?xmltex \currentcnt{12}?><?xmltex \def\figurename{Figure}?><label>Figure 12</label><caption><p id="d1e5892">Time series of September (orange, upper panel) and March (blue,
lower panel) Arctic sea ice volume for EC-Earth3 (thin solid lines
representing the ensemble mean), EC-Earth3-Veg (dashed lines representing
the ensemble mean), the CMIP5 version of EC-Earth (dotted lines), and PIOMAS
reanalysis (thick solid lines). The EC-Earth3 and EC-Earth3-Veg ensemble
minimum and maximum are represented by the same line style as their means,
but with transparent shading added around the ensemble means.</p></caption>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f12.png"/>

        </fig>

      <p id="d1e5902">We chose PIOMAS as a reference product for sea ice thickness and volume
because of the relatively long available time frame (i.e., from 1979 to now)
compared to observational products, which cover much shorter periods.
Uncertainties in PIOMAS are related to the underlying ocean and sea ice
models, to the atmospheric forcing, and to the observational data
available to the assimilation scheme. PIOMAS ice thickness estimates agree
well with the ICESat ice thickness retrievals for the central Arctic, the
area for which submarine data are available, with a mean difference smaller
than 0.1 m, while differences outside this area are larger (Schweiger et
al., 2011). Also, PIOMAS spatial thickness patterns agree well with ICESat
thickness. PIOMAS appears to overestimate thin ice thickness and
underestimate thick ice. The latter feature partly explains the higher ice
thickness in EC-Earth3 in the central Arctic compared to PIOMAS (Fig. 13).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F14" specific-use="star"><?xmltex \currentcnt{13}?><?xmltex \def\figurename{Figure}?><label>Figure 13</label><caption><p id="d1e5907">Difference in Arctic sea ice thickness between the ensemble mean
of EC-Earth3 and PIOMAS in September <bold>(a)</bold> and March <bold>(b)</bold>, averaged over
1980–2010.</p></caption>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f13.png"/>

        </fig>

      <p id="d1e5922">While the EC-Earth3 historical ensemble represents the Arctic sea ice area
relatively well, it clearly underestimates the Antarctic sea ice area
(Fig. 10) by <inline-formula><mml:math id="M216" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 5 million km<inline-formula><mml:math id="M217" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> in September and
<inline-formula><mml:math id="M218" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 2 million km<inline-formula><mml:math id="M219" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> in March. This underestimation is linked
to the warm bias in the Southern Ocean (Fig. 4) and is visible for all
areas around Antarctica during the Southern Hemisphere summer (Fig. 14).
The underestimation is more pronounced close to the ice edge than in the
central pack ice during the Southern Hemisphere winter (Fig. 14). Also,
the modeled trend in Antarctic sea ice area in both September and March is
slightly negative, while observations show a slightly positive trend over
1979–2014 (Fig. 10). However, including the most recent years (after
2014), the observed Antarctic sea ice area does not exhibit any significant
trend (Meredith et al., 2019).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F15" specific-use="star"><?xmltex \currentcnt{14}?><?xmltex \def\figurename{Figure}?><label>Figure 14</label><caption><p id="d1e5959">Difference in Antarctic sea ice concentration between the
ensemble mean of EC-Earth3 and OSI SAF observations in September <bold>(a)</bold> and
March <bold>(b)</bold>, averaged over 1980–2010.</p></caption>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f14.png"/>

        </fig>

      <p id="d1e5974">Due to the absence of reliable long-term reanalysis and/or observational products
for Antarctica, we do not show maps of sea ice thickness in the Southern
Hemisphere.</p>
</sec>
<sec id="Ch1.S6.SS5">
  <label>6.5</label><title>AMOC</title>
      <p id="d1e5985">The Atlantic Meridional Overturning Circulation (AMOC) is connected with a
northward flow of warm and salty water in the upper layers of the Atlantic
Ocean and exports of cold and dense water southward in the deeper layers
(Buckley and Marshall, 2016). The ensemble mean of the AMOC stream function
obtained from the EC-Earth3 ensemble simulations (Fig. 15a), after being
averaged over 1980–2010, features the expected overturning clockwise
circulation cell with a maximum transport of 18 Sv centered at around
35<inline-formula><mml:math id="M220" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N and a depth of 1000 m. Compared to the 12-member
ensemble mean of EC-Earth 2.3 (Brodeau and Koenigk, 2016) used for CMIP5
(no figure), the CMIP6 version of EC-Earth presented here has a stronger
AMOC closer to observations (Smeed et al., 2018).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F16" specific-use="star"><?xmltex \currentcnt{15}?><?xmltex \def\figurename{Figure}?><label>Figure 15</label><caption><p id="d1e5999"><bold>(a)</bold> AMOC stream function in the depth and latitude plane for the
EC-Earth3 ensemble mean, averaged over 1980–2010 (in Sv). <bold>(b)</bold> Standard
deviation of AMOC between the members. The <inline-formula><mml:math id="M221" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> axis denotes degrees latitude.</p></caption>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f15.png"/>

        </fig>

      <p id="d1e6020">The ensemble mean time series of the AMOC index, defined as the maximum
volume transport stream function between 24.5 and 27.5<inline-formula><mml:math id="M222" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N,
covers values from well within the range of the RAPID-MOCHA array
observations (Smeed et al., 2017). The ensemble mean shows a weak decrease
of about 0.5 Sv from the year 1850 to 1876 with a relatively steady period until
1931 around 17.5 Sv, followed by an increase of around 2 Sv until 1980 and a
decrease afterwards. Individual members of the ensemble vary between 2 and 5 Sv, with the upper range matching the RAPID observational variability well.
It has to be noted that the RAPID data are available only for the last 20 years. Several other studies with ocean models forced by atmospheric
reanalysis data (e.g., Yeager and Danabasoglu, 2014; Huang et al., 2012)
show a later increase in AMOC between 1980 and the 1990s and a decrease after
the mid-1990s. Most CMIP5 models also show a later decrease in AMOC, mainly
after the year 2000 (e.g., Collins et al., 2013; Cheng et al., 2013).</p>
      <p id="d1e6033">There is a wide range of variability (Fig. 15b) between ensemble members,
possibly because each member starts from a different initial condition that
evolves differently depending on the state of the model's internal
variability. The variation between members occurs mainly at depth of
1000–2000 m and between 0 and 40<inline-formula><mml:math id="M223" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, and it has a pattern and magnitude similar
to the AMOC multidecadal variability (Fig. 2 in Boulton et al., 2014). A
first analysis suggests that the lowest AMOC strength values correspond to
extended periods with absent deepwater formation and expanded sea ice in
the Labrador Sea. Our preliminary analysis suggests that those ensemble
members with similar initial conditions (in terms of SST and SAT) have
similar curves in their AMOC index time series. This further suggests that
those members with a more realistic initial state might be better in
capturing the AMOC variability. Nevertheless, time series of 12 individual
members (out of 20 members) show a roughly similar trend after 1950.</p>
      <p id="d1e6045">The AMOC (Fig. 16) shows a variability of 70 to 100 years as in
ECHAM5 and the Max Planck Institute Ocean Model (Jungclaus et al., 2005) but a
narrower range than the variability of 50–200 years in CCSM4 (Danabasoglu
et al., 2012). One reason that could explain the somewhat long period of
variability for our EC-Earth simulations is that the modeled sea ice is
extending too far into the Labrador Sea, which keeps AMOC in a weaker state
for a longer period of time before recovering. In CMIP5, most models without
the convection were also covered by sea ice in the Labrador Sea in winter
(Heuzé, 2017).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F17"><?xmltex \currentcnt{16}?><?xmltex \def\figurename{Figure}?><label>Figure 16</label><caption><p id="d1e6050">Time series of maximum AMOC (maximum between 24.5–27.5<inline-formula><mml:math id="M224" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N) for
ensemble mean (black), low quartile (purple), high quartile (pink), ensemble
minimum (blue), and ensemble maximum (red) are shown for 19 members of
EC-Earth3. Observation data are shown with green  from RAPID-MOCHA array
observations (Smeed et al., 2017).</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f16.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F18"><?xmltex \currentcnt{17}?><?xmltex \def\figurename{Figure}?><label>Figure 17</label><caption><p id="d1e6070">Ocean northward heat transport: the blue curve is the ensemble mean,
and the light blue shading is delimited by the ensemble minimum and maximum.
The black curve is taken from Trenberth et al. (2019). The hydrographic
measurements at 26<inline-formula><mml:math id="M225" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N (RAPID) and 57<inline-formula><mml:math id="M226" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N (OSNAP) are shown as vertical bars.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f17.png"/>

        </fig>

      <p id="d1e6097">The ocean heat transport (Fig. 17) is related to the AMOC. North of
20<inline-formula><mml:math id="M227" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N it shows values slightly lower than observation estimates from
Trenberth et al. (2019) that cover the period from 2000–2014.</p>
</sec>
<sec id="Ch1.S6.SS6">
  <label>6.6</label><title>Modes of variability</title>
      <p id="d1e6117">Since the North Atlantic Oscillation (NAO) is one of the most relevant modes
of variability for the European climate, we assess its representation
separately. The NAO is characterized by atmospheric oscillation between the
Arctic and the subtropical Atlantic and can also be defined through changes
in surface pressure (Hurrell et al., 2003). During winter, the positive phase
of NAO has been defined when the difference between the Icelandic
low-pressure center and the Azores high-pressure center is intensified:
conversely, a negative NAO phase is when this difference is weaker than
usual. The NAO pattern is estimated by calculating the leading empirical
orthogonal function (EOF) of the detrended December to February (DJF)
monthly sea level pressure (SLP) anomalies over the Atlantic sector (20–80<inline-formula><mml:math id="M228" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N,
90<inline-formula><mml:math id="M229" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W–40<inline-formula><mml:math id="M230" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E). The ERA-20C and both EC-Earth ensemble means show very similar
spatial patterns (Fig. 20), with EC-Earth2.3 showing more intense negative
values over Iceland and less intense positive values over the Bay of Biscay and
northern Spain when compared to EC-Earth3 and observations.</p>
      <p id="d1e6147">Overall the representation of the NAO in EC-Earth3 shows minor improvements
with respect to EC-Earth2.3: the root mean square error (RMSE) of EC-Earth3 is 0.64 compared with
0.52 for EC-Earth2.3.</p>
      <p id="d1e6150">Previous assessments of coupled models have found that the CMIP5 and CMIP3
models represent NAO very similarly as in reanalyses, with no general
improvements of CMIP5 compared to CMIP3 models (Davini and Cagnazzo, 2014).</p>
      <p id="d1e6153">In EC-Earth3, the ENSO spatial patterns and amplitude are well represented
(not shown). In order to assess the variability of ENSO in the EC-Earth3
ensemble we calculated the Niño3.4 SST power spectra (Fig. 18) for
the model and for the HadISST observational dataset (Rayner et al., 2003).
HadISST shows the highest peak at 5.5 years and a range of periods between
3.3 and 3.7 forming the second highest peak. The mean of the EC-Earth3
ensemble spectra shows the highest peak at around 3.7 years. Some individual
members show their main peak at about 5.5 years, similar to the HadISST dataset. Most of the ensemble members (two with the highest peaks) show their
maximum in the 3–4-year period.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F19"><?xmltex \currentcnt{18}?><?xmltex \def\figurename{Figure}?><label>Figure 18</label><caption><p id="d1e6159">Power spectra of Niño3.4 sea surface temperature (SST) time
series for HadISST observations (black thick line), 20 EC-Earth3 ensemble
members (light green lines), and 4 EC-Earth 2.3 ensemble members (cyan
lines). The EC-Earth3 and EC-Earth2.3 ensemble means are shown as green and
blue thick lines, respectively. The Niño3.4 is calculated between
latitudes 5<inline-formula><mml:math id="M231" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N–5<inline-formula><mml:math id="M232" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S and longitudes 170–120<inline-formula><mml:math id="M233" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W. The power spectra were
calculated for the 1900–2009 period.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f18.png"/>

        </fig>

      <p id="d1e6195"><?xmltex \hack{\newpage}?>EC-Earth3 shows larger ENSO spectral power than EC-Earth2.3, with an ensemble
mean closer to the HadISST observations, especially in frequencies with high
energy. Thus, we see a clear improvement in the representation of ENSO in
EC-Earth3. Similar improvements were seen earlier for CMIP5 models (Jha
et al., 2014). While the frequency distribution in EC-Earth3 is distinctly
improved compared to EC-Earth2.3, a challenge is still seen in representing
distinct peaks in the power spectrum.</p>
      <p id="d1e6199">The range among the ENSO spectra of different members is considerable.
Climatologically, most ensemble members show only small differences over the
tropics when compared with the whole ensemble mean. Although the members
with the most energetic ENSO share some climatological features (cold Arctic
and Labrador seas) compared to the ensemble mean, the reason why they have
developed a more energetic ENSO remains unclear.</p>
      <p id="d1e6202">Previous studies have shown that winters of El Niño have an impact on
the circulation over the North Atlantic, favoring a negative phase of the
NAO in the late winter (e.g., García-Serrano   et al., 2011) teleconnected via
the extratropical Pacific–North American (PNA) pattern (Enfield and Mayer
1997; Giannini et al., 2000). This nonstationary relationship between ENSO
and the atmospheric variability over the North Atlantic and European sector
is already reproduced in the internal variability behavior of coupled
ocean–atmosphere systems in CMIP5 simulations (López-Parages et
al., 2016)</p>
      <p id="d1e6205">To better assess this relationship between ENSO and NAO, we calculated the
regression of the Niño3.4 index on sea level pressure (SLP) for the winter
season (December to February, DJF) for ERA-20C reanalysis and for both
EC-Earth ensembles (EC-Earth3 and EC_Earth2.3) (Fig. 19).
As reported by previous studies (Wallace and Gutzler, 1981), a positive
PNA-like pattern arises with an intensified lower Aleutian low and lower
pressure over the eastern United States. This low pressure extends along the
North American east coast into the central North Atlantic Ocean, while there
is higher pressure over and between Iceland and Scandinavia, a pattern that
is similar to a negative phase of NAO (Fig. 19). The EC-Earth3 ensemble
demonstrates a high resemblance to ERA-20C (Fig. 19), which is much improved
compared to the EC-Earth2.3 ensemble (Fig. 19). The latter shows weaker
SLP anomalies, which can be associated with a weaker ENSO intensity in
EC-Earth2.3 compared to the newer EC-Earth3 and to observations. Thus,
EC-Earth3 gives a clear improvement of the ENSO–NAO link.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F20"><?xmltex \currentcnt{19}?><?xmltex \def\figurename{Figure}?><label>Figure 19</label><caption><p id="d1e6211">Regression of Niño3.4 SST index onto sea level pressure during
winter (DJF) for the ERA-20C reanalysis <bold>(a)</bold>, 20-member EC-Earth3
ensemble mean <bold>(b)</bold>, and 4-member EC-Earth2.3 ensemble mean <bold>(c)</bold>. Analyses are based on 3-month means for December–February.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f19.png"/>

        </fig>

      <p id="d1e6229">Previous research has linked La Niña and El Niño events to the
positive and negative NAO patterns (Fereday at al., 2020). Although this link is
relatively weak due to the fact that internal atmospheric variability is
large in the North Atlantic European (NAE) region (Brönnimann, 2007), it
depends on ENSO strength (Jiménez-Esteve and Domeisen, 2019; Toniazzo
and Scaife, 2006). Therefore, a more energetic ENSO (more comparable in
scale with observations) such as in the current EC-Earth3 could impact
the intensity and sign of NAO.</p>
      <p id="d1e6232">The PNA pattern in EC-Earth3 shows strong spatial similarities with ERA-20C,
which is an improvement compared to EC-Earth2.3 (not shown). RMSEs are
respectively 0.9 and 0.54.
<?xmltex \hack{\newpage}?>
EC-Earth3 also shows a more realistic behavior than EC-Earth2.3 with
respect to typical features of the PNA patterns, i.e., an above-average
surface pressure over the subtropical Pacific (west of Hawaii) and over
western Canada, together with below-average surface pressure over the North
Pacific Ocean and along the southeastern United States.</p>
      <p id="d1e6237">The quasi-biennial oscillation (QBO) dominates the interannual variability
in the tropical stratosphere (Baldwin et al., 2001). As in most climate
models, the vertical discretization and the parameterization of gravity
waves are crucial (e.g., Bushell et al., 2020) for a realistic
representation of the QBO in EC-Earth.</p>
      <p id="d1e6240">In EC-Earth 2.3, with 62 vertical levels and without an ad hoc tuning, the
zonal wind in the equatorial band is easterly on average, reaching <inline-formula><mml:math id="M234" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>35 <inline-formula><mml:math id="M235" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>
close to the 5 hPa level (Fig. 21a). Note that results in this panel are
based on model level outputs interpolated onto equivalent pressure levels.
CMIP5 pressure level outputs are available only up to 20 hPa for other
ensemble members.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F21"><?xmltex \currentcnt{20}?><?xmltex \def\figurename{Figure}?><label>Figure 20</label><caption><p id="d1e6270">Regression of sea level pressure (SLP) anomalies to the NAO index
during winter (December to February) for the ERA-20C reanalysis <bold>(a)</bold>,
20-member EC-Earth ensemble mean <bold>(b)</bold>, and 4-member EC-Earth2.3
ensemble mean <bold>(c)</bold>.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f20.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F22" specific-use="star"><?xmltex \currentcnt{21}?><?xmltex \def\figurename{Figure}?><label>Figure 21</label><caption><p id="d1e6290">10 years of the equatorially (within 5<inline-formula><mml:math id="M236" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> from the Equator)
averaged monthly mean zonal wind in EC-Earth2.3 (r12i1p1, <bold>a</bold>) and EC-Earth3
(r4i1p1f1, <bold>b</bold>) as a function of time and altitude. Easterly winds are shaded
in gray, and the contour interval is 5 <inline-formula><mml:math id="M237" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>. The peak-to-peak amplitude
profiles of the equatorial zonal wind, estimated from the temporal standard
deviation for the period 1980–2010, are reported in <bold>(c)</bold> for ERA5 (black), 12
CMIP6 (red), and 6 CMIP5 (blue) ensemble members. In panel <bold>(d)</bold> the Fourier
spectra at the 30 hPa level for ERA5 (black) and the same experiments in
panel <bold>(c)</bold> are shown. Only for panel <bold>(a)</bold> are the results for EC-Earth2.3
interpolated onto pressure levels from native model levels.</p></caption>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f21.png"/>

        </fig>

      <p id="d1e6344">Like other models participating in CMIP6 (Richter et al., 2020), the realism
of the modeled QBO is notably improved in EC-Earth3, with 91 vertical
levels and a revised gravity wave scheme (see Sect. 3.1). A marked
alternation of easterly and westerly zonal wind shears can be seen
between approximately 100 and 5 hPa in Fig. 21b. While a realistic
QBO-like oscillation has been obtained, there is no improvement in the zonal
wind above 5 hPa, as it remains easterly year-round without a clear sign of
any stratospheric semi-annual oscillation. This phenomenon, linked with the
QBO, is also driven by vertically propagating waves (Smith et al., 2019).</p>
      <p id="d1e6347">From the comparison of the amplitude profiles with ERA5 (Fig. 21c), it is
clear that, even if still underestimated, the zonal wind variability in the
EC-Earth3 ensemble members is improved with respect to those of EC-Earth2.3.
As with other climate models (Bushell et al., 2020), the maximum of the
oscillation peaks somewhat higher (at 10 hPa) in EC-Earth3 than in the
reanalysis (closer to 20 hPa).</p>
      <p id="d1e6350">In Fig. 21d we also report the Fourier spectra at the 30 hPa (25 km)
level, again including ERA5 and ensemble members from EC-Earth2.3 and EC-Earth 3. For
the CMIP5 model only the annual harmonic stands out, whereas the EC-Earth 3
spectrum at 30 hPa resembles that of ERA5 much more closely, despite the
modeled QBO being slightly faster.</p>
</sec>
<sec id="Ch1.S6.SS7">
  <label>6.7</label><title>Carbon cycle components</title>
      <p id="d1e6361">As an outlook to the EC-Earth3-CC configuration, we present first
results here from the carbon cycle components of one member of the historical
experiment. In this configuration, the physical climate is equivalent to
that of the EC-Earth3-Veg configuration. However, besides the land
vegetation and biogeochemistry model, the ocean biogeochemistry model has
been activated. The latter describes the evolution of biogeochemical tracers
in the ocean, but it does not have any feedback on climate. Both land
vegetation and ocean biogeochemistry were equilibrated with a 1600-year-long
spin-up keeping atmospheric CO<inline-formula><mml:math id="M238" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> at pre-industrial level (284.32 ppm). The
completion of the spin-up was assessed following the recommendation of C4MIP
(Jones et al., 2016), with both the ocean and land C stocks having to drift by
less than 10 Pg C per century. Once this condition was met, a piControl simulation and
historical simulation were started from the same initial conditions.</p>
      <p id="d1e6373">The ocean's cumulative C uptake between 1870 and 2014 is 150.78 Pg C, in good
agreement with the estimate of 155 <inline-formula><mml:math id="M239" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 20 Pg C by the Global Carbon
Project (GCP) 2015 for the same period (Le Queré et al., 2015). The
average air–sea CO<inline-formula><mml:math id="M240" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> exchange between the atmosphere and the ocean for the
period 1981–2014 is compared here to the observation-based reconstruction of
Landschutzer et al. (2016) for the same period (Fig. 22). The overall
spatial distribution of the air–sea CO<inline-formula><mml:math id="M241" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> flux is in broad agreement with
observations, with the largest differences occurring at high latitudes. In
particular, in the Southern Ocean EC-Earth3-CC exhibits a large negative
bias (i.e., more outgassing) in some regions due to the presence of extended
periods of unrealistic open-sea convection. In the North Pacific and North
Atlantic, EC-Earth3-CC has a stronger CO<inline-formula><mml:math id="M242" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> uptake than observations, likely
due to a deeper mixed layer and frequent active convection in the Labrador
Sea, respectively.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F23"><?xmltex \currentcnt{22}?><?xmltex \def\figurename{Figure}?><label>Figure 22</label><caption><p id="d1e6412">Air–sea CO<inline-formula><mml:math id="M243" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> flux averaged over the period 1982–2014 for
EC-Earth3-CC <bold>(a)</bold>, the observation-based reconstruction by
Landschutzer et al. (2016; <bold>b</bold>), and their difference <bold>(c)</bold>.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f22.png"/>

        </fig>

      <p id="d1e6440">In Fig. 23 we show CO<inline-formula><mml:math id="M244" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> fluxes from the land and ocean components of
EC-Earth3 for the period 1960–2014. The ocean CO<inline-formula><mml:math id="M245" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> sink (SOCEAN; Fig. 23c)
of the EC-Earth3-CC historical simulation closely follows the multi-model
mean of the GCP 2019 (Friedlingstein et al., 2019), with differences in
variability due to the mismatch between climate in EC-Earth-CC and the
atmospheric forcing products used in the GCP. Land fluxes (computed from two
historical EC-Earth3-Veg runs, one with dynamic land use change and
management and one with land use fixed at 1850 levels) have increased
following increased atmospheric CO<inline-formula><mml:math id="M246" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and temperature, but these show a
stronger interannual variability in both emissions from land use change
(ELUC; Fig. 23a) and terrestrial CO<inline-formula><mml:math id="M247" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> sink (SLAND; Fig. 23b) compared to
the estimates from the DGVMs in GCP 2019. This interannual variability
originates from both climate differences between EC-Earth3-Veg and the
observation-based forcing, which includes the right timing of weather events
like El Niño in the offline simulations used for the GCP (Harris et al.,
2014) and the mismatch between the dynamic vegetation in LPJ-GUESS compared
to the land use dataset LUH2 (Hurtt et al., 2020) that dictates where and
when land use change occurs.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F24"><?xmltex \currentcnt{23}?><?xmltex \def\figurename{Figure}?><label>Figure 23</label><caption><p id="d1e6481">CO<inline-formula><mml:math id="M248" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> exchanges between the atmosphere and the terrestrial
biosphere for <bold>(a)</bold> CO<inline-formula><mml:math id="M249" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> emissions from land use change (ELUC) and <bold>(b)</bold> land CO<inline-formula><mml:math id="M250" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
sink (SLAND) with individual DGVMs (gray), the multi-model mean (dark green), and
its range (<inline-formula><mml:math id="M251" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula>, light green shading) from GCP overlaid with
EC-Earth3-Veg fluxes (black). Panel <bold>(c)</bold> shows the CO<inline-formula><mml:math id="M252" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> exchange between the
atmosphere and ocean (SOCEAN) with individual ocean models (gray), the multi-model
mean (dark blue), and its range (<inline-formula><mml:math id="M253" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula>, light blue shading) from
GCP overlaid with EC-Earth3-CC fluxes (black).</p></caption>
          <?xmltex \igopts{width=213.395669pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/15/2973/2022/gmd-15-2973-2022-f23.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S7" sec-type="conclusions">
  <label>7</label><title>Summary and conclusions</title>
      <p id="d1e6569">The EC-Earth research consortium represents a community of European
institutes developing and utilizing the EC-Earth Earth system model. In this
paper we document the overall concept of EC-Earth3, the model version used
for contributions to CMIP6, and its flexible coupling framework, major model
configurations, a methodology for ensuring the simulations are comparable
across different HPC systems, and the physical performance of base
configurations over the historical period. Simulations described in this
paper have been carried out under the CMIP6 framework conditions (Eyring et al., 2016). Wherever possible, we also compare the CMIP6 results to the
previous model version EC-Earth2 under the conditions of CMIP5.</p>
      <p id="d1e6572">The different configurations of EC-Earth3 described in Sect. 2 are enabled
by a flexible coupling framework. A traditional GCM configuration,
comprising a coupled atmosphere and ocean model, in different spatial
resolutions is accompanied by configurations with an interactive vegetation
module, active atmospheric composition and aerosols, full carbon cycle
configuration, and a configuration with a Greenland Ice Sheet model. The
variety of possible configurations and sub-models reflects the broad
interests in the EC-Earth community. The releases of the different
configurations were staggered in time to efficiently gain from preceding
coupling and tuning efforts.</p>
      <p id="d1e6575">The different component models linked for the EC-Earth3 framework, described
in Sect. 3, are partly community models, arise from developments of
partner institutes, or arise from centralized efforts such as for the forecast
model IFS developed by ECMWF.</p>
      <p id="d1e6578">Model tuning has been carried out for different configurations. It was
feasible to share identical tuning for both the GCM (base configuration
EC-Earth3) and the configuration coupled to dynamic vegetation for a given
resolution. Different tuning outcomes had to be applied to varying
resolutions and for the configuration with interactive aerosols and
atmospheric composition.</p>
      <p id="d1e6582">For standard resolutions, the goal of atmosphere tuning was to minimize the
error in the global means of the net radiative flux at the surface, the top-of-atmosphere (TOA) fluxes, and longwave and shortwave cloud forcing
without compromising the radiative imbalance at the top of the atmosphere.
In the configurations with the coupled ocean, it was possible to adjust only
ocean and sea ice parameters while maintaining atmospheric tuning to prevent
the model from drifting under constant forcing.</p>
      <p id="d1e6585">For low-resolution configurations largely used for millennium-scale
simulations, we aimed at a tuning for a climate in a radiative equilibrium
to prevent the global mean surface temperature from drifting under the
conditions of a stable climate.</p>
      <p id="d1e6588">Running the ESM on different HPC systems across various partner institutions
constitutes a challenge for comparability of simulations. Therefore, the
EC-Earth consortium has chosen to implement a protocol that judges
compatibility based on statistical differences between ensembles carried out
in different computing environments. The protocol is applied in all cases
when simulations are shared between partners with their respective HPC
systems.</p>
      <p id="d1e6591">The basic physical performance of EC-Earth3 is presented by a number of key
indicators and quantities, with a focus on CMIP6 historical simulations
carried out for 1850–2014. EC-Earth3 represents a large step forward
compared to previous versions. As the basic configuration we chose
EC-Earth3, the classic GCM configuration, because of the larger ensemble of
simulations compared to the EC-Earth3-Veg configuration, which is the GCM
coupled to the dynamic vegetation model. As performance metrics we chose
global means of key variables, their geographical patterns, behavior of
oscillation patterns, and circulation features.</p>
      <p id="d1e6594">We find that the global mean temperature in the historical ensemble has a
warm bias of about 0.5 K in comparison with ERA5, which is mainly due to a
strong warm bias in the Southern Ocean area. We find an oscillatory
behavior between two states that are characterized by low or high values of
the AMOC, cold or warm North Atlantic temperatures, and more or less sea ice in the
Arctic. There is an indication that the oscillation might be reduced as the
climate warms. The global warming over the historical period, given as
the near-surface air temperature difference between the periods 1981–2010 and
1851–1880, is 0.7 K, which is only slightly higher than the 0.63 K estimate
for the observed warming (IPCC; Hoegh-Guldberg et al., 2018).</p>
      <p id="d1e6597">The global mean precipitation patterns are well represented in EC-Earth3,
while the amplitude is overestimated, pointing to an overestimation of the
hydrological cycle. Mean sea level pressures are close to ERA5 for most
geographical areas, as is the interannual variability.</p>
      <p id="d1e6601">The ensemble mean Arctic sea ice area is slightly overestimated in several
regions, while the trend since 1980 is captured well by the model during all
months. Furthermore, the total Arctic sea ice volume is overestimated
compared to reanalysis data. EC-Earth3 clearly underestimates the Antarctic
sea ice area as a consequence of a warm bias in the Southern Ocean.</p>
      <p id="d1e6604">Zonal winds in EC-Earth3 are characterized by an underestimation of the
winter westerly jet and by an overestimation of the equatorward component of
the tropical jet in the summer hemisphere. An underestimation of the winter
stratospheric polar vortex – stronger in the Southern Hemisphere – is
identified.</p>
      <p id="d1e6607">Atmospheric blocking shows a typical bias over the winter North Pacific and
the common underestimation of winter European blocking, with indications of
a jet that is too penetrative over the European continent.</p>
      <p id="d1e6610">The ensemble AMOC index covers values from well within the range of existing
observations. Variability in the individual members of the ensemble varies
between 2 and 5 Sv, which is in line with observed decadal-scale variability.</p>
      <p id="d1e6613">The NAO and PNA patterns in the EC-Earth3 ensemble show a spatially high
resemblance to the ERA-20C reanalysis. A small improvement compared to
previous versions is in line with generally minor improvements between model
generations since CMIP3. A clear improvement of the ENSO–NAO link is seen.</p>
      <p id="d1e6616">The ENSO power spectrum for EC-Earth3 shows peak amplitudes close to the
observations, which is a pronounced improvement compared to older versions.
Also, the frequency distribution in EC-Earth3 is markedly improved, though
representing distinct peaks in the power spectrum is still a challenge.</p>
      <p id="d1e6620">The realism of the modeled QBO is notably improved in EC-Earth3 thanks to
increased vertical resolution and a revised non-orographic gravity wave
scheme.</p>
      <p id="d1e6623">Parallel papers extend the current analysis to improve our understanding of
the EC-Earth3 climate sensitivity (Wyser et al., 2020a), the impact of new
emission scenarios (Wyser et al., 2020b), results from the high-resolution
configuration (Haarsma et al., 2020), and a platform comparison study
(Massonnet et al., 2020). Forthcoming papers will, for example, explore
dynamic oscillations during the PI control, assess the skill of climate
forecasts (Bilbao et al., 2021), and highlight future climate projections.</p>
      <p id="d1e6626">In summary, the EC-Earth3 key performance metrics demonstrate physical
behavior and biases well within the frame known from CMIP5 models, with
improved physical and dynamic features (Sects. 2 and 3), new ESM
components, a much more flexible system framework, community tools, and
largely improved indicators compared to the CMIP5 version. In short,
EC-Earth3 represents a large step forward for the only European community
ESM. We show here that EC-Earth3 is suited for a range of tasks in CMIP6 and
beyond.</p>
</sec>

      
      </body>
    <back><notes notes-type="codeavailability"><title>Code availability</title>

      <p id="d1e6633">The EC-Earth3 code is available from the EC-Earth development portal for
members of the consortium. All code related to CMIP6 forcing is implemented
in the component models. Model codes developed at ECMWF, including the
atmosphere model IFS, are intellectual property of ECMWF and its member
states. Permission to access the EC-Earth3 source code can be requested from
the EC-Earth community via the EC-Earth website (<uri>http://www.ec-earth.org/</uri>, EC-Earth consortium, 2019a)
and may be granted if a corresponding software license agreement is signed
with ECMWF. The repository tag for the version of EC-Earth that is used in
this work is 3.3.1. Currently, only European users can be granted access
due to license limitations of the atmosphere model. The component models
NEMO, LPJ-GUESS, TM5, and PISM are not limited by their licenses.</p>
  </notes><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e6642">The data produced with EC-Earth3 for CMIP6 are freely available from any ESGF data portal
(e.g. <uri>https://esg-dn1.nsc.liu.se/search/cmip6-liu/</uri>, last access: 18 March 2022, EC-Earth Consortium, 2019b, <ext-link xlink:href="https://doi.org/10.22033/ESGF/CMIP6.4872" ext-link-type="DOI">10.22033/ESGF/CMIP6.4872</ext-link>). A long  and complete list of experiments
and realizations can be generated by a search for source_id=EC-Earth3.</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e6654">All authors contributed to the development of the code or to the analysis of
results. All authors contributed to the discussion of the results and the final paper. The majority of
authors provided contributions across several sections of the paper.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e6660">The authors declare that they have no conflict of interest.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d1e6666">Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e6673">This paper and the development of EC-Earth3 would not have been possible
without the member institutions of the EC-Earth consortium and their
sustained support of the development and application to CMIP6. Those members
are the following: Agencia Estatal de Meteorología (AEMET, Spain); Institute of
Atmospheric Sciences and Climate of the Consiglio Nazionale delle Ricerche,
ISAC-CNR (Italy); Danmarks Meteorologiske Institut, DMI (Denmark); Finnish
Meteorological Institute, FMI (Finland); the Portuguese Institute for Sea and
Atmosphere, IPMA (Portugal); the Royal Netherlands Meteorological Institute,
KNMI (the Netherlands); Department of Housing, Planning and Local Government
Met Éireann (Ireland); the Swedish Meteorological and Hydrological
Institute, SMHI (Sweden); the Alfred Wegener Institute, AWI (Germany);
Barcelona Supercomputing Center, BSC (Spain); the Centro de Geofisica,
University of Lisbon (Portugal); the National Agency for New Technologies,
Energy and Sustainable Economic Development, ENEA (Italy); GEOMAR (Germany);
the Geophysical Institute, University of Bergen (Norway); the Irish Centre
of High-End Computing, ICHEC (Ireland); the Institute for Marine and
Atmospheric Research Utrecht, IMAU (the Netherlands); Karlsruhe Institute of
Technology, KIT (Germany); Lund University (Sweden); Meteorologiska
Institutionen at Stockholm University, MISU (Sweden); Niels Bohr Institute at
University of Copenhagen (Denmark); Netherlands eScience Center, NLeSC (the
Netherlands); Oulun Yliopisto (Finland); SARA (the Netherlands);
Université catholique de Louvain (Belgium); Universiteit Utrecht (the
Netherlands); Universiteit Wageningen (the Netherlands); University College
Dublin (Ireland); University of Helsinki (Finland); Uppsala Universitet
(Sweden); University of Santiago de Compostela, USC (Spain); Vrije
Universiteit Amsterdam (the Netherlands).</p><p id="d1e6675">The authors would like to acknowledge the use of component models as
provided by either central organizations (ECMWF) or communities (for TM5,
LPJ-GUESS, and NEMO including LIM3, PISCES, and PISM).</p><p id="d1e6677">The authors would like to thank Anna Eronn from SMHI for supporting the
preparation of the paper.</p><p id="d1e6679">The computations for this publication were partly enabled by resources
provided by the Swedish National Infrastructure for Computing (SNIC) at NSC
and PDC, partially funded by the Swedish Research Council through grant
agreement no. SNIC 2018/2-11. Computations needed for model tuning were
enabled by computing and archive resources provided by ECMWF under special
project SPNLTUNE. Further computation resources used for production with the
EC-Earth-CC configuration were partly enabled by the Partnership for
Advanced Computing in Europe (PRACE) under the allocation TOPSyCled (no.
2019204993).</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e6684">The development of EC-Earth3 was supported by the European Union's Horizon
2020 research and innovation program under project IS-ENES3, the third
phase of the distributed e-infrastructure of the European Network for Earth
System Modelling (ENES) (grant agreement no. 824084, PRIMAVERA grant no. 641727,
and CRESCENDO grant no. 641816).</p>

      <p id="d1e6687">Etienne Tourigny and Raffaele Bernardello have received funding from the European Union’s
Horizon 2020 research and innovation program under Marie
Skłodowska-Curie grant agreement nos. 748750 (SPFireSD project)
and 708063 (NeTNPPAO project). Ivana Cvijanovic was supported by Generalitat
de Catalunya (Secretaria d'Universitats i Recerca del Departament
d’Empresa i Coneixement) through the Beatriu de Pinós program.
Yohan Ruprich-Robert was funded by the European Union's Horizon 2020 research
and innovation program in the framework of Marie Skłodowska-Curie grant INADEC (grant agreement 800154). Paul A. Miller, Lars Nieradzik, David Wårlind,
Roland Schrödner, and Benjamin Smith acknowledge financial support from the strategic research
area “Modeling the Regional and Global Earth System”
(MERGE) and the Lund University Centre for Studies of Carbon
Cycle and Climate Interactions (LUCCI). Paul A. Miller, David Wårlind, and Benjamin Smith acknowledge
financial support from the Swedish national strategic e-science
research program eSSENCE. Paul A. Miller further acknowledges
financial support from the Swedish Research Council (Vetenskapsrådet)
under project no. 621-2013-5487. Shuting Yang acknowledges financial
support from a Synergy Grant from the European Research
Council under the European Community's Seventh Framework Programme
(FP7/2007-2013)/ERC (grant agreement 610055) as part
of the ice2ice project and the NordForsk-funded Nordic Centre
of Excellence project (award 76654) ARCPATH. Marianne Sloth Madsen acknowledges
financial support from the Danish National Center for Climate
Research (NCKF). Andrea Alessandri and Peter Anthoni acknowledge funding from the
Helmholtz Association in its ATMO program.
Thomas Arsouze, Arthur Ramos, and Valentina Sicardi received funding from the Ministerio de
Ciencia, Innovación y Universidades as part of the DeCUSO project
(CGL2017-84493-R).​​​​​​​</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e6693">This paper was edited by Fiona O'Connor and reviewed by Neil Swart and Fiona O'Connor.</p>
  </notes><ref-list>
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