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  <front>
    <journal-meta><journal-id journal-id-type="publisher">GMD</journal-id><journal-title-group>
    <journal-title>Geoscientific Model Development</journal-title>
    <abbrev-journal-title abbrev-type="publisher">GMD</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Geosci. Model Dev.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1991-9603</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/gmd-14-2659-2021</article-id><title-group><article-title>Interpol-IAGOS: a new method for assessing long-term chemistry–climate simulations in the UTLS based on IAGOS data, and its application to the MOCAGE CCMI REF-C1SD simulation</article-title><alt-title>Assessing CCM/CTM simulations using IAGOS</alt-title>
      </title-group><?xmltex \runningtitle{Assessing CCM/CTM simulations using IAGOS}?><?xmltex \runningauthor{Y. Cohen et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff2 aff3">
          <name><surname>Cohen</surname><given-names>Yann</given-names></name>
          <email>yann.cohen.09@gmail.com</email>
        <ext-link>https://orcid.org/0000-0002-7588-2613</ext-link></contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Marécal</surname><given-names>Virginie</given-names></name>
          <email>virginie.marecal@meteo.fr</email>
        <ext-link>https://orcid.org/0000-0003-1077-909X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Josse</surname><given-names>Béatrice</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Thouret</surname><given-names>Valérie</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Centre National de Recherches Météorologiques, Université de Toulouse, Météo-France, CNRS, Toulouse, France</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Laboratoire d'Aérologie, University of Toulouse, CNRS, IRD, <?xmltex \hack{\break}?> Université Toulouse 3 – Paul Sabatier (UPS), Toulouse, France</institution>
        </aff>
        <aff id="aff3"><label>a</label><institution>now at: Laboratoire des Sciences du Climat et de l'Environnement, LSCE-IPSL (CEA-CNRS-UVSQ), Université Paris-Saclay, Gif-sur-Yvette, France</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Yann Cohen (yann.cohen.09@gmail.com) and Virginie Marécal (virginie.marecal@meteo.fr)</corresp></author-notes><pub-date><day>12</day><month>May</month><year>2021</year></pub-date>
      
      <volume>14</volume>
      <issue>5</issue>
      <fpage>2659</fpage><lpage>2689</lpage>
      <history>
        <date date-type="received"><day>29</day><month>September</month><year>2020</year></date>
           <date date-type="accepted"><day>3</day><month>April</month><year>2021</year></date>
           <date date-type="rev-recd"><day>30</day><month>March</month><year>2021</year></date>
           <date date-type="rev-request"><day>13</day><month>October</month><year>2020</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2021 Yann Cohen et al.</copyright-statement>
        <copyright-year>2021</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021.html">This article is available from https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021.html</self-uri><self-uri xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021.pdf">The full text article is available as a PDF file from https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e126">A wide variety of observation data sets are used to assess long-term simulations provided by chemistry–climate models (CCMs) and chemistry-transport models (CTMs). However, the upper troposphere–lower stratosphere (UTLS) has hardly been assessed in these modelling exercises yet. Observations performed in the framework of IAGOS (In-service Aircraft for a Global Observing System) combine the advantages of in situ airborne measurements in the UTLS with an almost-global-scale sampling, a <inline-formula><mml:math id="M1" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula>-year monitoring period and a high frequency. Even though a few model assessments have been made using the IAGOS database, none of them took advantage of the dense and high-resolution cruise data in their whole ensemble yet. The present study proposes a method to compare this large IAGOS data set to long-term simulations used for chemistry–climate studies. As a first application, the REF-C1SD reference simulation generated by the MOCAGE (MOdèle de Chimie Atmosphérique à Grande Echelle) CTM in the framework of Chemistry-Climate Model Initiative (CCMI) phase I has been evaluated during the 1994–2013 period for ozone (<inline-formula><mml:math id="M2" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) and the 2002–2013 period for carbon monoxide (CO). The concept of the new comparison software proposed here (so-called Interpol-IAGOS) is to project all IAGOS data onto the 3-D grid of the model with a monthly resolution, since generally the 3-D outputs provided by chemistry–climate models for multi-model comparisons on multi-decadal timescales are archived as monthly means. This provides a new IAGOS data set (IAGOS-DM) mapped onto the model's grid and time resolution. To get a model data set consistent with IAGOS-DM for the comparison, a subset of the model's outputs is created (MOCAGE-M) by applying a mask that retains only the model data at the available IAGOS-DM grid points.</p>
    <p id="d1e150">Climatologies are derived from the IAGOS-DM product, and good correlations are reported between with the MOCAGE-M spatial distributions. As an attempt to analyse MOCAGE-M behaviour in the upper troposphere (UT) and the lower stratosphere (LS) separately, UT and LS data in IAGOS-DM were sorted according to potential vorticity. From this, we derived <inline-formula><mml:math id="M3" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and CO seasonal cycles in eight regions well sampled by IAGOS flights in the northern midlatitudes. They are remarkably well reproduced by the model for lower-stratospheric <inline-formula><mml:math id="M4" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and also good for upper-tropospheric CO.</p>
    <p id="d1e175">Along this model evaluation, we also assess the differences caused by the use of a weighting function in the method when projecting the IAGOS data onto the model grid compared to the scores derived in a simplified way. We conclude that the data projection onto the model's grid allows us to filter out biases arising from either spatial or temporal resolution, and the use of a weighting function yields different results, here by enhancing the assessment scores. Beyond the MOCAGE REF-C1SD evaluation presented in this paper, the method could be used by CCMI models for individual<?pagebreak page2660?> assessments in the UTLS and for model intercomparisons with respect to the IAGOS data set.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e187">Chemistry–climate models (CCMs) and chemistry-transport models (CTMs) are essential tools for understanding atmospheric composition, providing information where measurements are lacking and predicting air composition future evolution. Assessing and reducing uncertainties in the processes controlling its past and future changes can be achieved by comparing an ensemble of simulations from different models while using the same simulation setup. Among the model intercomparison projects, the main goal of the Chemistry-Climate Model Initiative <xref ref-type="bibr" rid="bib1.bibx9" id="paren.1"><named-content content-type="pre">CCMI;</named-content></xref> is the reduction of the uncertainties in the multi-model projections involving stratospheric ozone, tropospheric composition and climate change but also in a better understanding of the atmospheric processes relevant for these topics. CCMI is a common initiative from the International Global Atmospheric Chemistry (IGAC) and Stratosphere-to-troposphere Processes And their Role in Climate (SPARC) projects. It has taken over from both SPARC CCMVal (Chemistry-Climate Model Validation; <xref ref-type="bibr" rid="bib1.bibx27" id="author.2"/>, <xref ref-type="bibr" rid="bib1.bibx27" id="year.3"/>) focused on the stratosphere and IGAC ACCMIP <xref ref-type="bibr" rid="bib1.bibx16" id="paren.4"><named-content content-type="pre">Atmospheric Chemistry-Climate Model Intercomparison Project;</named-content></xref> dealing mainly with tropospheric composition. In this framework, a set of simulations has been designed to address its objectives. Among them, the REF-C1SD experiment aims at assessing the ability of the models to reproduce the actual atmospheric composition for the recent climate time period. For this purpose, a part of its protocol consists of nudging the meteorological fields to meteorological reanalyses based on observations, as indicated by the SD suffix (which stands for “specified dynamics”). The task for each participating model thus consisted of simulating as realistically as possible the tropospheric and stratospheric compositions in the last decades (1980–2010), following a common protocol.</p>
      <p id="d1e206">Several studies have assessed the ability of REF-C1SD experiments, or previous similar simulations of air composition under recent climate conditions, to reproduce the mean tropospheric and/or stratospheric composition, by the use of monthly mean climatologies from observation data sets as reference, mostly from space. <xref ref-type="bibr" rid="bib1.bibx10" id="text.5"/> based the evaluation of the REF-C1SD run from the Community Earth System Model version 1 – Whole Atmosphere Community Climate Model (CESM1-WACCM)  on zonal monthly means of the stratospheric ozone column, using the Microwave Limb Sounder on the Aura satellite (Aura-MLS) and the multi-satellite data set merged in the framework of the GOZCARDS (Global OZone Chemistry And Related trace gas Data records for the Stratosphere) project. As described in <xref ref-type="bibr" rid="bib1.bibx38" id="text.6"/>, tropospheric ozone fields provided by the ACCMIP participating models have been assessed, referring to zonally averaged mixing ratios from the Tropospheric Emission Spectrometer <xref ref-type="bibr" rid="bib1.bibx2" id="paren.7"/>, and tropospheric ozone column from OMI-MLS <xref ref-type="bibr" rid="bib1.bibx37" id="paren.8"/>. <xref ref-type="bibr" rid="bib1.bibx14" id="text.9"/> also compared the OMI-MLS tropospheric ozone columns to a GEOS-Chem simulation. The observed carbon monoxide (CO) columns from Measurement Of Pollution In The Troposphere (MOPITT) instrument served as the reference in the assessment of modelled tropospheric CO, notably from the REF-C1SD simulation generated by the Global Modeling Initiative (GMI) CTM over the period 2000–2010 <xref ref-type="bibr" rid="bib1.bibx30" id="paren.10"/>, and from the CESM1  Community Atmosphere Model version 4 with chemistry (CAM4-Chem)  <xref ref-type="bibr" rid="bib1.bibx35" id="paren.11"/>.</p>
      <p id="d1e231">Only few studies compared observations (in situ measurements or from space) and CCMI REF-C1SD or similar simulations, focusing on the upper troposphere–lower stratosphere (UTLS). However, the latter is a key region regarding both the ozone (<inline-formula><mml:math id="M5" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) radiative forcing <xref ref-type="bibr" rid="bib1.bibx25" id="paren.12"/> and the stratosphere–troposphere exchange (STE) that substantially influences tropospheric ozone levels <xref ref-type="bibr" rid="bib1.bibx31" id="paren.13"><named-content content-type="pre">e.g.</named-content></xref>, albeit with a high uncertainty due to their different representations in models <xref ref-type="bibr" rid="bib1.bibx28" id="paren.14"/>. <xref ref-type="bibr" rid="bib1.bibx26" id="text.15"/> referred to the Aura-MLS measurements in the assessment of a 21st century projection (REF-C2) from 12 CCMs, focusing on their lower-stratospheric water vapour fields, during the 2004–2014 time period.  In situ measurements with ozonesondes as part of the World Ozone and Ultraviolet radiation Data Center (WOUDC) have been compared to the REF-C1SD simulations from the Canadian Middle Atmosphere Model (CMAM) and ECHAM/MESSy Atmospheric Chemistry (EMAC) models during the 2005–2010 time period <xref ref-type="bibr" rid="bib1.bibx36" id="paren.16"/>. In addition to ozonesondes, aircraft measurements from different campaigns were used in the evaluation of the REF-C1SD simulations from the  CESM1 CAM4-Chem model <xref ref-type="bibr" rid="bib1.bibx35" id="paren.17"/>. Aircraft campaigns have already proven their usefulness in assessing models in the UTLS. <xref ref-type="bibr" rid="bib1.bibx34" id="text.18"/> built a climatology of <inline-formula><mml:math id="M6" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and CO in the tropics, subtropics and extratropics by gathering a wide set of aircraft campaigns from 1995 to 2008. <xref ref-type="bibr" rid="bib1.bibx13" id="text.19"/> used this and other aircraft-campaign-based data sets to assess the 18 CCMs participating in CCMVal-2 in the extratropical lower stratosphere using several diagnostics. For instance, the seasonal cycles derived at 100 and 200 hPa highlighted a relatively good reproduction of ozone behaviour in the lower stratosphere and allowed us to identify an overestimation of the transport from the tropics at 100 hPa and across the tropopause at 200 hPa. However, their conclusion also highlighted the limitations in space and time of the in situ observations, especially in the upper troposphere.</p>
      <p id="d1e283">Among available observation data sets, the commercial aircraft measurements from the ongoing IAGOS  <xref ref-type="bibr" rid="bib1.bibx24" id="paren.20"><named-content content-type="pre">In-service Aircraft for a Global Observing System;</named-content><named-content content-type="post"><uri>http://www.iagos.org</uri>, last access: 7 May 2021</named-content></xref> European<?pagebreak page2661?> research infrastructure are well designed to study ozone and CO in the long term, notably in the UTLS <xref ref-type="bibr" rid="bib1.bibx6" id="paren.21"/>. IAGOS observations started in August 1994 for ozone and in December 2001 for CO. They are characterized by a high spatiotemporal resolution and a wide coverage with most data gathered at cruise levels (9–12 km above sea level). Thus, the IAGOS database is suited to assess long-term simulations in this altitude range. Recently, its ozone data have been used to evaluate simulations from the  CESM1 CAM4-Chem <xref ref-type="bibr" rid="bib1.bibx35" id="paren.22"/> and GEOS-Chem models <xref ref-type="bibr" rid="bib1.bibx14" id="paren.23"/> during the periods 1995–2010 and 2012–2013, respectively. <xref ref-type="bibr" rid="bib1.bibx35" id="text.24"/> used the IAGOS measurements gathered in the vicinity of Narita airport (Japan) only, and the comparison made by <xref ref-type="bibr" rid="bib1.bibx14" id="text.25"/> only spread over 2 years, while IAGOS ozone data have been available since 1994 and covered a wide area, especially in the northern midlatitudes from western North America to East Asia. <xref ref-type="bibr" rid="bib1.bibx3" id="author.26"/> (<xref ref-type="bibr" rid="bib1.bibx3" id="year.27"/>, <xref ref-type="bibr" rid="bib1.bibx4" id="year.28"/>) combined research aircraft measurements with the first years of the IAGOS-MOZAIC database (1995–1998) to assess five CTMs and two CCMs. <xref ref-type="bibr" rid="bib1.bibx11" id="text.29"/> performed an evaluation of the MACC (Monitoring Atmospheric Composition and Climate) reanalysis over Europe during 2003–2010, using IAGOS <inline-formula><mml:math id="M7" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and CO measurements. However, these comparisons used frequent simulation outputs. Although the high frequency is necessary for their approach to separate accurately the air masses into different categories, it is not adapted to the assessment of monthly averaged fields used in multi-model intercomparisons. Consequently, the IAGOS cruise data in the UTLS have been used neither as a whole ensemble nor to derive a monthly climatology for the evaluation of long-term chemistry–climate simulations. This is what we propose in the present paper.</p>
      <p id="d1e335">To compare the REF-C1SD simulations against IAGOS data, interpolating the simulation outputs onto the high-resolution observations would be the most accurate way, but high-frequency outputs from multi-model intercomparisons such as CCMI are not available yet. Alternatively, the comparison could be performed after mapping the high-resolution IAGOS data onto the model grid on a monthly basis. Several gridding methods already exist for in situ measurements. Some of them consist of calculating a linear combination from the neighbouring measurements points onto each grid point <xref ref-type="bibr" rid="bib1.bibx22" id="paren.30"><named-content content-type="pre">e.g.</named-content></xref>. However, it requires us to store  the information of all the measurement locations and during a whole month simultaneously. It is thus convenient for measurements with regular locations such as surface stations, whereas their use on the IAGOS database would be expensive computationally as well. Variational methods are also widely employed <xref ref-type="bibr" rid="bib1.bibx1" id="paren.31"><named-content content-type="pre">e.g.</named-content></xref> but they concern data assimilation, which is not our purpose. The present study aims at providing a new methodology designed to generate a gridded monthly data set from the IAGOS measurements, in order to evaluate REF-C1SD types of simulations. We also propose a set of relevant diagnostics for the model evaluation against IAGOS data mapped onto the model grid. These diagnostics originate from <xref ref-type="bibr" rid="bib1.bibx6" id="text.32"/> who studied climatologies and trends in ozone and CO, based on the analysis of the  full IAGOS data set corresponding to the cruise phase of flights. The use of such a high spatial and temporal resolution data set allows us to account for inter-regional differences that could not be highlighted with zonal means. Its projection onto a model grid suits well the constraint of working on monthly outputs from multi-decadal simulations like REF-C1SD. In order to demonstrate the interest of the new methodology and its associated diagnostics, we perform the assessment on one of the REF-C1SD simulations, that of the MOCAGE (MOdèle de Chimie Atmosphérique à Grande Echelle) CTM.</p>
      <p id="d1e351">In Sect. <xref ref-type="sec" rid="Ch1.S2"/>, we describe briefly the IAGOS observations, the CCMI model intercomparison project, the MOCAGE CTM that we use in this study and its configuration for the REF-C1SD simulation. In Sect. <xref ref-type="sec" rid="Ch1.S3"/>, we present the methodology proposed to map the IAGOS data set onto the model grid on a monthly resolution, the chosen statistical metrics for models' evaluation and the different assessment diagnostics. In Sect. <xref ref-type="sec" rid="Ch1.S4"/>, we present a first application of this methodology on the evaluation of the MOCAGE REF-C1SD simulation. Strengths and weaknesses of the methodology and the chosen diagnostics are discussed. Conclusions are given in Sect. <xref ref-type="sec" rid="Ch1.S5"/>.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Observations and simulation</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>The IAGOS observations</title>
      <p id="d1e377">The European Research Infrastructure IAGOS <xref ref-type="bibr" rid="bib1.bibx24" id="paren.33"><named-content content-type="post"><uri>http://www.iagos.org</uri>, last access: 7 May 2021</named-content></xref> provides in situ measurements aboard several commercial aircraft. The observations used hereafter have been performed in the framework of the ongoing IAGOS-Core programme that followed the MOZAIC programme <xref ref-type="bibr" rid="bib1.bibx18" id="paren.34"/>. Ozone (CO) measurements started in August 1994 (December 2001), based on an UV (IR) absorption technology, with an accuracy of 2 ppb (5 ppb), a precision of 2 % (5 %) and a time resolution of 4 s (30 s). Further information about the instruments can be found in <xref ref-type="bibr" rid="bib1.bibx18" id="text.35"/> and <xref ref-type="bibr" rid="bib1.bibx32" id="text.36"/> for <inline-formula><mml:math id="M8" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and in <xref ref-type="bibr" rid="bib1.bibx20" id="text.37"/> for CO. <xref ref-type="bibr" rid="bib1.bibx21" id="text.38"/> present a more recent evaluation of both ozone and CO instruments in the frame of IAGOS. The IAGOS observations (referring to the IAGOS-Core database hereafter) frequently sample the whole troposphere near airports, measuring vertical profiles during ascent and descent phases, and the UTLS during the cruise phases, mostly in the northern midlatitudes where most of the flight observations are gathered. In these latitudes, a recent analysis of <inline-formula><mml:math id="M9" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and CO climatologies and trends based on almost two decades of IAGOS cruise measurements has been performed in <xref ref-type="bibr" rid="bib1.bibx6" id="text.39"/>. In addition to global climatologies, the same analysis also focused on eight<?pagebreak page2662?> well-sampled regions in the UT and the LS separately. In order to generate  results comparable with the latter, this study focuses on the same time period (1994–2013) and, where relevant, on the same regions.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>The CCMI project and the REF-C1SD experiment</title>
      <p id="d1e436">The CCMI project is a common initiative from the IGAC and SPARC programmes. CCMI phase 1 gathers a community of 18 CCMs and two CTMs, whose description is given in the review of <xref ref-type="bibr" rid="bib1.bibx19" id="text.40"/>. A series of experiments has been designed to model tropospheric and stratospheric air compositions for past, present and future climates. For each experiment, a common protocol is recommended to all participating models. Amongst the CCMI simulations, the REF-C1SD reference experiment aims at modelling as realistically as possible the day-to-day tropospheric and stratospheric compositions in a recent climate, using SD. For this purpose, as described in <xref ref-type="bibr" rid="bib1.bibx9" id="text.41"/>, the simulations are driven by (or nudged towards) dynamical reanalysis data sets (typically ERA-Interim or MERRA) and extending from 1980 to 2010. For this long-term simulation, the 3-D output fields of species concentrations are archived as monthly means.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>The MOCAGE model and the simulation setup</title>
      <p id="d1e453">The MOCAGE model (<xref ref-type="bibr" rid="bib1.bibx15" id="author.42"/>, <xref ref-type="bibr" rid="bib1.bibx15" id="year.43"/>; <xref ref-type="bibr" rid="bib1.bibx12" id="author.44"/>, <xref ref-type="bibr" rid="bib1.bibx12" id="year.45"/>) is an offline global CTM. The chemical scheme is composed by the coupling of the RACM <xref ref-type="bibr" rid="bib1.bibx29" id="paren.46"><named-content content-type="pre">Regional Atmospheric Chemistry Mechanism;</named-content></xref> and the REPROBUS <xref ref-type="bibr" rid="bib1.bibx17" id="paren.47"><named-content content-type="pre">REactive Processing Ruling the Ozone BUdget in the Stratosphere;</named-content></xref> schemes, corresponding to tropospheric and stratospheric chemistry, respectively. The MOCAGE REF-C1SD simulation is run using a global domain at a <inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> horizontal resolution, and 47 vertical levels, in hybrid <inline-formula><mml:math id="M11" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>–pressure levels, distributed from the surface up to <inline-formula><mml:math id="M12" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> hPa. The simulation is driven by the meteorological fields from the ERA-Interim reanalysis. The biomass burning and anthropogenic emissions come from the Global Fire Emissions Database version 2 (GFEDv2) and MACC/CityZEN EU project (MACCity) inventories, respectively. The latter is characterized by a 10-year resolution, and a linear interpolation is applied to derive yearly emissions. The period spreads from August 1994 to December 2013, consistent with <xref ref-type="bibr" rid="bib1.bibx6" id="text.48"/>. The first 14 years come from the MOCAGE REF-C1SD simulation originally produced for the CCMI project. For the years out of the period covered by the experiment, the MOCAGE REF-C1SD run has been extended to 31 December 2013 using the same code and inputs as in the original MOCAGE CCMI REF-C1SD simulation.</p><?xmltex \hack{\newpage}?>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Methodology</title>
      <p id="d1e529">The objective of the proposed methodology is to make possible the comparison between the whole IAGOS database and the 3-D monthly mean volume mixing ratios from CTMs and CCMs simulations. Our approach consists of distributing the IAGOS observations, performed every 4 s, on a given model grid. A first application is proposed on the MOCAGE REF-C1SD run, characterized by a <inline-formula><mml:math id="M13" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> km horizontal resolution in the midlatitudes and a <inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">800</mml:mn></mml:mrow></mml:math></inline-formula> m vertical resolution in the UTLS. In order to account for the distance of the measurements from the centre within one given cell, we chose a reverse linear interpolation at the first order, as described in Sect. <xref ref-type="sec" rid="Ch1.S3.SS1"/> and illustrated in Fig. <xref ref-type="fig" rid="Ch1.F1"/>. The subsequent gridded monthly means are derived using weighted averages, as described in Sect. <xref ref-type="sec" rid="Ch1.S3.SS2"/>, and are directly comparable to the model monthly mean outputs.</p>
      <p id="d1e558">In a first step, this approach is used for a statistical evaluation of the MOCAGE REF-C1SD climatologies on a hemispheric scale over the periods December 1994–November 2013 for <inline-formula><mml:math id="M15" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and December 2001–November 2013 for CO. The data processing used to produce the climatologies and the statistical metrics chosen are presented in Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/>. In a second step, we attempt to go further in the assessment of the MOCAGE simulation by evaluating separately the upper troposphere and the lower stratosphere. For this purpose, the discrimination between the grid points mostly representative of the UT or the LS is necessary. As in <xref ref-type="bibr" rid="bib1.bibx6" id="text.49"/>, this has been done with respect to Ertel potential vorticity (PV) and applied in eight northern midlatitude regions selected because of their high level of sampling by IAGOS. The methodology used is explained in Sect. <xref ref-type="sec" rid="Ch1.S3.SS4"/>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Figure}?><label>Figure 1</label><caption><p id="d1e581">Schematic of the method used for the distribution of the observations on the model grid, represented in two dimensions for simplicity. Panel <bold>(a)</bold> shows the location of a chosen measurement point in the model's grid. The steps of the method are <bold>(b)</bold> to locate the model's grid points (orange crosses) closest to this location; <bold>(c)</bold> to calculate a normalized scalar for each dimension (<inline-formula><mml:math id="M16" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M17" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula>), depending on the distance between the measurement point and the “bottom-left” grid point; <bold>(d)</bold> to calculate the weight of the four closest grid points. As indicated in the colour scale on the right, this weight ranges between 0 and 1.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f01.png"/>

      </fig>

<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Reverse interpolation of a given measurement point on the model grid</title>
      <?pagebreak page2663?><p id="d1e625">At a given point where IAGOS measured a mixing ratio <inline-formula><mml:math id="M18" display="inline"><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mtext>obs</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:mi>X</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> for species <inline-formula><mml:math id="M19" display="inline"><mml:mi>X</mml:mi></mml:math></inline-formula>, the algorithm presented here locates its position on the model grid defined by its longitude, latitude and hybrid <inline-formula><mml:math id="M20" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>–pressure coordinates. More precisely, we locate the model grid point which is the closest west and south of, and below (in altitude), the observation point and which corresponds to the <inline-formula><mml:math id="M21" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>th, <inline-formula><mml:math id="M22" display="inline"><mml:mi>j</mml:mi></mml:math></inline-formula>th and <inline-formula><mml:math id="M23" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula>th grid point coordinates, respectively. As shown in Fig. <xref ref-type="fig" rid="Ch1.F1"/>c, a normalized scalar is then computed for each dimension (coefficients <inline-formula><mml:math id="M24" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M25" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M26" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula>), increasing linearly with the distance between the measurement point and the <inline-formula><mml:math id="M27" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> grid point. Note that the <inline-formula><mml:math id="M28" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula> vertical coefficient is derived from log-pressure coordinates. Finally, a resulting 3-D weight is computed for each of the eight closest cells. By noting the variable indexes <inline-formula><mml:math id="M29" display="inline"><mml:mi>I</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M30" display="inline"><mml:mi>J</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M31" display="inline"><mml:mi>K</mml:mi></mml:math></inline-formula> belonging to the ensembles <inline-formula><mml:math id="M32" display="inline"><mml:mrow><mml:mo mathvariant="italic">{</mml:mo><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:mo mathvariant="italic">{</mml:mo><mml:mi>j</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:mo mathvariant="italic">{</mml:mo><mml:mi>k</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula>, respectively, we define the functions <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mi>I</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:msub><mml:mi>g</mml:mi><mml:mi>J</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mi>K</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, whose values depend on <inline-formula><mml:math id="M38" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M39" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M40" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula>, respectively, such as
<?xmltex \hack{\newpage}?>

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M41" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E1"><mml:mtd><mml:mtext>1</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>f</mml:mi><mml:mi>I</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:mfenced open="{" close=""><mml:mtable columnspacing="1em" rowspacing="0.2ex" class="cases" columnalign="left left" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mtext>if</mml:mtext><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi>I</mml:mi><mml:mo>=</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="italic">α</mml:mi></mml:mtd><mml:mtd><mml:mrow><mml:mtext>if</mml:mtext><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi>I</mml:mi><mml:mo>=</mml:mo><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>g</mml:mi><mml:mi>J</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:mfenced open="{" close=""><mml:mtable columnspacing="1em" class="cases" rowspacing="0.2ex" columnalign="left left" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">β</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mtext>if</mml:mtext><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi>J</mml:mi><mml:mo>=</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="italic">β</mml:mi></mml:mtd><mml:mtd><mml:mrow><mml:mtext>if</mml:mtext><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi>J</mml:mi><mml:mo>=</mml:mo><mml:mi>j</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>h</mml:mi><mml:mi>K</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mfenced open="{" close=""><mml:mtable rowspacing="0.2ex" class="cases" columnspacing="1em" columnalign="left left" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">γ</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mtext>if</mml:mtext><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi>K</mml:mi><mml:mo>=</mml:mo><mml:mi>k</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="italic">γ</mml:mi></mml:mtd><mml:mtd><mml:mrow><mml:mtext>if</mml:mtext><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi>K</mml:mi><mml:mo>=</mml:mo><mml:mi>k</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

            The resulting weight of each of the grid points surrounding the measurement location is thus defined as the following product:
            <disp-formula id="Ch1.E2" content-type="numbered"><label>2</label><mml:math id="M42" display="block"><mml:mrow><mml:msub><mml:mi>W</mml:mi><mml:mrow><mml:mi>I</mml:mi><mml:mo>,</mml:mo><mml:mi>J</mml:mi><mml:mo>,</mml:mo><mml:mi>K</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msub><mml:mi>f</mml:mi><mml:mi>I</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>)</mml:mo><mml:mo>⋅</mml:mo><mml:msub><mml:mi>g</mml:mi><mml:mi>J</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mo>)</mml:mo><mml:mo>⋅</mml:mo><mml:msub><mml:mi>h</mml:mi><mml:mi>K</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          In this way, as illustrated in Fig. <xref ref-type="fig" rid="Ch1.F1"/>d, for a given cell <inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>I</mml:mi><mml:mo>,</mml:mo><mml:mi>J</mml:mi><mml:mo>,</mml:mo><mml:mi>K</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> amongst the eight closest ones, this weight decreases when the distance increases between the measurement point and the model grid point. Note that since the simulation outputs are monthly averages, we use the monthly mean surface pressure for determining the hybrid <inline-formula><mml:math id="M44" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>–pressure levels on the 47 vertical grid levels for a given model longitude/latitude. Although the surface pressure can show an important intra-monthly variability, we calculated that a 30 hPa change at surface would cause a variation weaker than 2 hPa on a given vertical grid level in the UTLS. Although caution is needed while treating low-altitude measurements, the monthly resolution on the surface pressure field thus has a negligible impact on the distribution of the IAGOS data from the cruise altitudes onto the model vertical grid.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Deriving the monthly mean values from observations</title>
      <p id="d1e1180">The weighting coefficients defined above correspond to a single observation data point. To obtain monthly averages from the whole observation data set, the last step consists of summing up all the values measured in the vicinity of the <inline-formula><mml:math id="M45" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> grid points for each month. Thus, for a given grid point <inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, we define <inline-formula><mml:math id="M47" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> as the index for the measurement performed in its vicinity during the considered month, and the corresponding mixing ratio for the species <inline-formula><mml:math id="M48" display="inline"><mml:mi>X</mml:mi></mml:math></inline-formula> is denoted <inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mrow><mml:mtext>obs</mml:mtext><mml:mo>,</mml:mo><mml:mi>n</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>X</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M50" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> the total number of measurements performed in its vicinity. The monthly value of the <inline-formula><mml:math id="M51" display="inline"><mml:mi>X</mml:mi></mml:math></inline-formula> mixing ratio at <inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is then derived with the equation
            <disp-formula id="Ch1.E3" content-type="numbered"><label>3</label><mml:math id="M53" display="block"><mml:mrow><mml:msub><mml:mi>X</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mo>∑</mml:mo><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>N</mml:mi></mml:msubsup><mml:msub><mml:mi>W</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>)</mml:mo><mml:msub><mml:mi>C</mml:mi><mml:mrow><mml:mtext>obs</mml:mtext><mml:mo>,</mml:mo><mml:mi>n</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>X</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:msubsup><mml:mo>∑</mml:mo><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>N</mml:mi></mml:msubsup><mml:msub><mml:mi>W</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where the denominator is equivalent to the amount of weighted measurement points performed in the <inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> grid cell during the chosen month. Hereafter, we refer to it as <inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>eq</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>. In the end, this method yields monthly fields of IAGOS <inline-formula><mml:math id="M56" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and CO mixing ratios (or any other variable measured by IAGOS, e.g. water vapour) projected on the MOCAGE grid points where IAGOS data are available. This data set is named IAGOS-DM hereafter, the suffix DM referring to the distribution on the model grid. With this method, the cruise observation data are distributed onto the MOCAGE vertical levels spanning from level 28 up to level 22 and corresponding to the <inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">360</mml:mn></mml:mrow></mml:math></inline-formula>–175 hPa interval. Note that the measurement points on the MOCAGE vertical levels below level 28 (<inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">360</mml:mn></mml:mrow></mml:math></inline-formula> hPa) are considered as corresponding to ascent or descent phases of the flights. These measurements are not processed since they are only available in small areas close to airports. Levels 27 and 28 generally correspond to these phases too but include cruise measurements above elevated lands, since hybrid <inline-formula><mml:math id="M59" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>–pressure levels tend to follow land elevation. In order to compare the observations and the model at the same locations and months, we apply a mask on the MOCAGE REF-C1SD simulation outputs that allows us to account only for the IAGOS-DM sampled grid points. The subsequent data set is named MOCAGE-M, the letter “M” referring to the mask. Thus, IAGOS-DM and MOCAGE-M data sets are spatially consistent and can be used to make grid-point-to-grid-point comparisons on climatological timescales, as long as we assume the gridded IAGOS data to be representative of the measurement period. The latter point has been tested on a 5-year subsample using the simulation daily outputs instead of monthly outputs. It consisted of comparing MOCAGE-M to a test product derived by calculating monthly averages from the daily outputs<?pagebreak page2664?> and applying a mask based on the IAGOS daily sampling. The results from this test are briefly presented in Sect. <xref ref-type="sec" rid="Ch1.S4"/>.</p>
      <p id="d1e1499">In order to test the advantages of the linear interpolation involving weighting factors, we also derive another product from the IAGOS database using a simplified method, i.e. by solely averaging the measurement points into the grid cells where they are located. This control product is named IAGOS-DM-noW hereafter, the -noW suffix standing for “no weighting”. Since it changes the spatial sampling distribution, a new subsequent mask has to be applied to the MOCAGE grid to be consistent with the IAGOS-DM-noW product, called MOCAGE-M-noW hereafter.</p>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Methodology for the assessment of the climatologies</title>
<sec id="Ch1.S3.SS3.SSS1">
  <label>3.3.1</label><title>Filtering conditions</title>
      <p id="d1e1517">For the climatological part of this study, we chose to perform a seasonal and a yearly analysis. Avoiding sampling biases where and when IAGOS-DM data (counted as <inline-formula><mml:math id="M60" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>eq</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) are not numerous enough requires that the seasonal sample <inline-formula><mml:math id="M61" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>eq</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> reaches a minimum threshold to be selected (noted <inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>thres</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>). We chose to set this <inline-formula><mml:math id="M63" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>thres</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> limit depending on latitude to account for the varying grid-box area linked to the <inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> grid and on the chemical tracer to account for the shorter period for CO measurements compared to <inline-formula><mml:math id="M65" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. <inline-formula><mml:math id="M66" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>thres</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> therefore decreases with latitude following a cosine function, similarly to the model horizontal grid cell areas. The reference threshold <inline-formula><mml:math id="M67" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mrow><mml:mtext>thres</mml:mtext><mml:mo>,</mml:mo><mml:mtext>ref</mml:mtext></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> corresponds to <inline-formula><mml:math id="M68" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements for grid-box areas during a given season, over the whole period (December 1994–November 2013 for <inline-formula><mml:math id="M69" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and December 2001–November 2013 for CO). It has been set to <inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mrow><mml:mtext>thres</mml:mtext><mml:mo>,</mml:mo><mml:mtext>ref</mml:mtext></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula> as a compromise between sampling robustness and a large-enough amount of data in IAGOS-DM sample. Accounting for the shorter CO measurement period compared to <inline-formula><mml:math id="M71" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M72" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">60</mml:mn></mml:mrow></mml:math></inline-formula> % of the <inline-formula><mml:math id="M73" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> period), the same threshold applied to the CO climatologies would result in a greater proportion of filtered-out grid cells. Thus, the corresponding <inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>thres</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> threshold for this species is derived by applying a factor of 0.6, leading to 60. Note that this reference threshold is defined seasonally. Therefore, the <inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mrow><mml:mtext>thres</mml:mtext><mml:mo>,</mml:mo><mml:mtext>ref</mml:mtext></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> used for yearly climatologies is multiplied by a factor of 4.</p>
</sec>
<sec id="Ch1.S3.SS3.SSS2">
  <label>3.3.2</label><title>Statistical metrics for assessing the climatologies</title>
      <p id="d1e1733">Quantifying a simulation assessment requires the use of statistical parameters. This paragraph aims at defining the chosen metrics and at justifying this choice. Pearson's coefficient is a key result from linear regressions. It is used to quantify the correlation between two signals. If we call <inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>m</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:msub><mml:mo>)</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mspace linebreak="nobreak" width="-0.125em"/><mml:mo>[</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi>N</mml:mi><mml:mo>]</mml:mo><mml:mspace linebreak="nobreak" width="-0.125em"/><mml:mo>]</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>o</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:msub><mml:mo>)</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mspace width="-0.125em" linebreak="nobreak"/><mml:mo>[</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi>N</mml:mi><mml:mo>]</mml:mo><mml:mspace width="-0.125em" linebreak="nobreak"/><mml:mo>]</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> the lists of modelled and observed values, respectively, their correlation is defined as
              <disp-formula id="Ch1.E4" content-type="numbered"><label>4</label><mml:math id="M78" display="block"><mml:mrow><mml:mi>r</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mi>N</mml:mi></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mo>∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>N</mml:mi></mml:msubsup><mml:mo>(</mml:mo><mml:msub><mml:mi>m</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>m</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>o</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>o</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>m</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>o</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M79" display="inline"><mml:mover accent="true"><mml:mi>m</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> and <inline-formula><mml:math id="M80" display="inline"><mml:mover accent="true"><mml:mi>o</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> are the mean values and <inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>m</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>o</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> their respective standard deviations. Quantifying total biases and mean errors is also primordial in a model assessment. However, the use of the absolute mean bias and root mean square error (RMSE) may not be relevant for climatological purposes because of a strong influence that could arise from observed outliers. In our context, another inconvenience lies in the strong vertical <inline-formula><mml:math id="M83" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> gradient near and above the tropopause. It tends to induce a strong absolute bias with respect to the tropospheric mixing ratios, since it makes the <inline-formula><mml:math id="M84" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> absolute mean bias and RMSE mainly depending on the highest vertical grid cells. The normalized bias metric (and associated standard error) is chosen for a better representativeness of biases for both low and high mixing ratios. The modified normalized mean bias (MNMB) and the fractional gross error (FGE) are respectively defined as
              <disp-formula id="Ch1.E5" content-type="numbered"><label>5</label><mml:math id="M85" display="block"><mml:mrow><mml:mtext>MNMB</mml:mtext><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">2</mml:mn><mml:mi>N</mml:mi></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>N</mml:mi></mml:munderover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>m</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>o</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>m</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>o</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>
            and
              <disp-formula id="Ch1.E6" content-type="numbered"><label>6</label><mml:math id="M86" display="block"><mml:mrow><mml:mtext>FGE</mml:mtext><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">2</mml:mn><mml:mi>N</mml:mi></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>N</mml:mi></mml:munderover><mml:mo mathsize="2.5em">|</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>m</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>o</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>m</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>o</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo mathsize="2.5em">|</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
      <p id="d1e2068">The MNMB (FGE) represents precisely the spatial average based on the model relative biases (on their absolute value) shown in Figs. <xref ref-type="fig" rid="Ch1.F3"/>, <xref ref-type="fig" rid="Ch1.F4"/> and in Sect. <xref ref-type="sec" rid="App1.Ch1.S1"/> in Appendix.</p>
</sec>
</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>Methodology for assessing the seasonal cycles in the UT and in the LS</title>
      <?pagebreak page2665?><p id="d1e2086">A second part of this assessment targets the behaviour of the model in the UT and the LS separately. The diagnostics we use for this purpose are adapted from <xref ref-type="bibr" rid="bib1.bibx6" id="text.50"/>, based on <xref ref-type="bibr" rid="bib1.bibx33" id="text.51"/>, who used the PV fields from the ECMWF operational analysis to derive the tropopause pressures. In contrast to the latter studies, we define the tropopause layer with the monthly averaged PV fields from ERA-Interim, as used in the MOCAGE REF-C1SD simulation. A given grid point is considered as belonging to the UT if its monthly PV is lower than 2 potential vorticity units (PVU) and to the LS if the PV is greater than 3 PVU. The cells at which PV ranges between 2 and 3 PVU are considered as belonging to the transition zone separating the two layers and are not selected. In order to enhance the distinction between the UT and the transition zone, the first model level below the 2 PVU threshold is also filtered out from the UT. The 2 PVU threshold is derived from a log-pressure interpolation between the grid points. We also filter out the grid boxes where this PV classification is not consistent with the mean observed <inline-formula><mml:math id="M87" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratio, i.e. where the monthly <inline-formula><mml:math id="M88" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> level reaches 140 ppb in the UT and where it goes under 60 ppb in the LS. It avoids an additional bias based on errors in the dynamical field leading to unrealistic UT and LS attribution. These thresholds on <inline-formula><mml:math id="M89" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratio were chosen according to the <inline-formula><mml:math id="M90" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> seasonal cycles shown in Fig. 3.7 in <xref ref-type="bibr" rid="bib1.bibx6" id="text.52"/>, where the upper boundary linked to the interannual standard deviation in the UT is less than 100 ppb and where the lower boundary in the LS is greater than 100 ppb. We estimated that a supplementary 40 ppb interval would limit an exaggerated filtering of grid cell monthly values.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><?xmltex \currentcnt{2}?><?xmltex \def\figurename{Figure}?><label>Figure 2</label><caption><p id="d1e2145">Map of the regions selected for this study based on <xref ref-type="bibr" rid="bib1.bibx6" id="text.53"/>, adapted to the MOCAGE global grid. From west to east, the acronyms stand for western North America, the eastern United States, northern Atlantic, western Europe, western Mediterranean Basin, the Middle East, central Siberia and northeastern Asia.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f02.png"/>

        </fig>

      <p id="d1e2157">As in <xref ref-type="bibr" rid="bib1.bibx6" id="text.54"/>, we focus our analysis on the seasonal cycles for eight regions in the northern midlatitudes that are well sampled by IAGOS. Their coordinates and their corresponding sampling are detailed in Table 1 in <xref ref-type="bibr" rid="bib1.bibx6" id="text.55"/>. Because of the <inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> horizontal grid resolution in the simulation, we applied a <inline-formula><mml:math id="M92" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> eastward or northward shift on the odd-coordinated edges. The subsequent regions defined in this paper are shown in Fig. <xref ref-type="fig" rid="Ch1.F2"/>. For each of them, the monthly means are calculated by averaging the gridded monthly means separately in the UT and the LS. The latter values were defined as described in Sect. <xref ref-type="sec" rid="Ch1.S3.SS1"/> and <xref ref-type="sec" rid="Ch1.S3.SS2"/>. In <xref ref-type="bibr" rid="bib1.bibx6" id="text.56"/>, the regional monthly means with less than 300 data were filtered out. Here, due to the loss of data caused by the monthly resolution, we lowered this minimum threshold to 150 in order to keep taking the less-sampled regions into account, such as western North America and Siberia. Still, we kept the criterion from <xref ref-type="bibr" rid="bib1.bibx6" id="text.57"/> which required at least 7 d between the first and last measurements in the considered month and region, avoiding the averages to be representative of transient meteorological conditions only. Following the same study, the computation of the seasonal cycles is based on the years exhibiting 7 available months or more, distributed over three seasons at least. This criterion avoids biases linked to the interseasonal differences in the sampling, thus ensuring a good representativeness of the whole year. It is important to note that the sampling threshold mentioned in this paragraph concerns each monthly average within a regional time series, contrasting with the sampling threshold we use for the (multi-)decadal average on each grid cell in the horizontal climatologies.</p>
</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Results</title>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Monthly representativeness</title>
      <p id="d1e2227">A first step in the assessment of the methodology consists of testing the monthly representativeness of the IAGOS-DM mean values, in order to evaluate the temporal consistency between IAGOS-DM and MOCAGE-M. For this purpose, as mentioned at the end of Sect. <xref ref-type="sec" rid="Ch1.S3.SS2"/>, we compared MOCAGE-M to a test product derived by calculating monthly averages from the simulation daily outputs, after applying a mask based on the IAGOS daily sampling. For this test, the chosen period spreads from 2003 to 2007 inclusive, an uninterrupted measurement period for both ozone and CO. Concerning the mean 3-D distributions, a mean normalized difference between the two products has been found below 1.7 % for each season and each species. In absolute values, 10 % of the yearly mean biases are greater than 6.0 % (4.1 %) for ozone (CO), and 1 % are greater than 13.1 % (10.3 %). Seasonal mean biases are characterized by a 90th percentile generally lower than 10 %, and a 99th percentile from 14.7 % up to 22.8 % for ozone and from 13.0 % up to 18.1 % for CO. The maximum values correspond to winter and spring. Concerning the seasonal cycles, the relative difference between the two MOCAGE products was found to be almost systematically below 5 %, and amongst all the regions, its ozone values seldom reach past 10 %, with a maximum value at 15.2 %. In conclusion of this comparison, the similar results obtained between MOCAGE-M and the test product suggested that in most cases, the IAGOS-DM monthly means could be considered as representative of the month.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Horizontal climatologies</title>
      <p id="d1e2240">Figures 3 and 4 show the yearly mean climatologies, respectively, for <inline-formula><mml:math id="M93" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and CO, and the model relative biases. The latter are defined as the model bias normalized to the average between the two data sets and are provided in percentages in these figures. Level 22 is seldom reached by the IAGOS measurements, and levels 27 and 28 are sampled only in the vicinity of airports. Thus, only levels 26 up to 23 are represented in these figures. Additionally, the seasonal mean climatologies are available in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{3}?><?xmltex \def\figurename{Figure}?><label>Figure 3</label><caption><p id="d1e2258">Mean horizontal distribution of the <inline-formula><mml:math id="M94" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratio (ppb) from the model levels 26 (<inline-formula><mml:math id="M95" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">320</mml:mn></mml:mrow></mml:math></inline-formula> hPa, bottom panels) to 23 (<inline-formula><mml:math id="M96" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> hPa, top panels) in IAGOS-DM (left panels) and MOCAGE-M (middle panels) during the period December 1994–November 2013. The normalized bias is represented in the right panels, in percentage with respect to the average between the two data sets.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f03.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><?xmltex \currentcnt{4}?><?xmltex \def\figurename{Figure}?><label>Figure 4</label><caption><p id="d1e2300">As in Fig. <xref ref-type="fig" rid="Ch1.F3"/> for CO, during the period December 2001–November 2013.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f04.png"/>

        </fig>

      <p id="d1e2312">In Fig. <xref ref-type="fig" rid="Ch1.F3"/>, IAGOS-DM and MOCAGE-M show similar geographical structures. In the tropics and subtropics, the <inline-formula><mml:math id="M97" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> amounts are close, with consistent poleward gradients. Both have maxima located above northeastern Canada. The <inline-formula><mml:math id="M98" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratio in the northern midlatitudes is underestimated in the model for levels 24–26, and close to the observations for level 23. The seasonal climatologies in Figs. <xref ref-type="fig" rid="App1.Ch1.S1.F9"/>–<xref ref-type="fig" rid="App1.Ch1.S1.F12"/> show that this feature is representative of spring and fall, whereas ozone tends to be underestimated (overestimated) in all vertical grid levels in summer (winter). Note that the discontinuity over Greenland is due to its topography causing a steep elevation of the vertical grid levels.</p>
      <p id="d1e2343">In Fig. <xref ref-type="fig" rid="Ch1.F4"/>, CO also shows a good correlation between the two data sets, notably with the same maxima and minima locations. But the CO mixing ratio is generally overestimated by the model, especially over East Asia and India. In the northern midlatitudes, the seasonal climatologies in Figs. <xref ref-type="fig" rid="App1.Ch1.S1.F13"/>–<xref ref-type="fig" rid="App1.Ch1.S1.F16"/> generally show an overestimation in winter and spring and a less-visible underestimation in summer and fall.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><?xmltex \currentcnt{5}?><?xmltex \def\figurename{Figure}?><label>Figure 5</label><caption><p id="d1e2354">Scatterplots comparing the yearly mixing ratios from MOCAGE-M and IAGOS-DM, for <inline-formula><mml:math id="M99" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (left panels) and CO (right panels), at each vertical grid level. The linear regression fit is represented by the solid black line. The dashed grey line represents the <inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:math></inline-formula> reference line, and the shaded area corresponds to a 10 % error. The regression coefficients and the amount of data (<inline-formula><mml:math id="M101" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula>) are written in the top-left corner of each panel.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f05.png"/>

        </fig>

      <?pagebreak page2666?><p id="d1e2393">Figure <xref ref-type="fig" rid="Ch1.F5"/> proposes a synthesis for the comparison between the yearly climatologies over the whole period. The same figures can also be found for each season in Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>. The linear regression parameters indicated in the graphs show a strong geographical correlation, its coefficient spreading from 0.73 up to 0.97. The correlation is better for <inline-formula><mml:math id="M102" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M103" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">0.92</mml:mn></mml:mrow></mml:math></inline-formula>) and at higher levels for both species. Consequently, the geographical distributions in <inline-formula><mml:math id="M104" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and CO are well reproduced in the simulation. Their stronger correlations at higher levels suggest a remarkably good consistency of the modelled stratospheric composition with the observations, showing its ability to simulate stratospheric chemistry and transport. The same feature is visible with the regression fit, showing a lower bias for <inline-formula><mml:math id="M105" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, and at highest levels. With respect to the <inline-formula><mml:math id="M106" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> line, levels 25 and 26 are characterized by an overestimation of the lower part of the <inline-formula><mml:math id="M107" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> distribution (<inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">120</mml:mn></mml:mrow></mml:math></inline-formula> ppb) and by an underestimation of the higher part, more pronounced during boreal summer according to Fig. <xref ref-type="fig" rid="App1.Ch1.S2.F19"/>. A possible reason is that the summertime tropopause altitude in these regions can be overestimated by the model, or that the vertical stability is underestimated. These biases have been largely improved with the most recent version of MOCAGE used to run CCMI phase 2 simulations. Concerning CO, the highest values (generally <inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula> ppb) correspond to the strongly emitting and convective regions: South Asia, East Asia and tropical Africa. Figure <xref ref-type="fig" rid="Ch1.F4"/> allows us to identify the high mixing ratios close to the <inline-formula><mml:math id="M110" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> line at tropical African points, whereas the high mixing ratios with a positive bias were associated  with both South and East Asian areas. The latter can be due to an overestimation of convection in this region and/or an overestimation in the inventory for Asian emissions. On the contrary, CO above tropical Africa shows good results, indicating a realistic combination between convection and emissions.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><?xmltex \currentcnt{6}?><?xmltex \def\figurename{Figure}?><label>Figure 6</label><caption><p id="d1e2506">Same as Fig. <xref ref-type="fig" rid="Ch1.F5"/>, gathering the points from the four vertical levels.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f06.png"/>

        </fig>

      <p id="d1e2518">The method proposed in this paper to evaluate MOCAGE REF-C1SD against IAGOS data in the UTLS aims at being applied to other chemistry–climate simulations, like the REF-C1SD simulations from other models. Since IAGOS is mapped onto the model vertical grid, the latter differing from one model to another, we also plotted a synthetic regression in Fig. <xref ref-type="fig" rid="Ch1.F6"/>, where all the points at all levels have been gathered into a single scatterplot. This summarized model performance concerning mean spatial distributions includes the final products of our evaluation methodology for climatologies. From the whole ensemble of <inline-formula><mml:math id="M111" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">13</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">000</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">12</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">500</mml:mn></mml:mrow></mml:math></inline-formula>) sampled grid points for <inline-formula><mml:math id="M113" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (CO), the correlation shows a good agreement between the simulation and the observations, especially for <inline-formula><mml:math id="M114" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:mi>r</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.95</mml:mn></mml:mrow></mml:math></inline-formula>). Its regression fit is dominated by an overestimation for lower values (<inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula> ppb) and an underestimation for higher values, especially between 200 and 300 ppb. Above 350 ppb, the balance between overestimated and underestimated <inline-formula><mml:math id="M117" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> values tends to be more balanced.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e2608">Seasonal and annual metrics synthesizing the assessment of the simulated <inline-formula><mml:math id="M118" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and CO climatologies by IAGOS-DM, gathering all the vertical grid levels as in Fig. <xref ref-type="fig" rid="Ch1.F6"/>. From left to right: Pearson's correlation coefficient (<inline-formula><mml:math id="M119" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula>), modified normalized mean bias (MNMB), fractional gross error (FGE) and the sample size (<inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>cells</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Species</oasis:entry>
         <oasis:entry colname="col2">Season</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M121" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">MNMB</oasis:entry>
         <oasis:entry colname="col5">FGE</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M122" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>cells</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M123" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">DJF</oasis:entry>
         <oasis:entry colname="col3">0.95</oasis:entry>
         <oasis:entry colname="col4">0.144</oasis:entry>
         <oasis:entry colname="col5">0.190</oasis:entry>
         <oasis:entry colname="col6">12 723</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">MAM</oasis:entry>
         <oasis:entry colname="col3">0.94</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.033</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.163</oasis:entry>
         <oasis:entry colname="col6">12 622</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">JJA</oasis:entry>
         <oasis:entry colname="col3">0.92</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.169</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.280</oasis:entry>
         <oasis:entry colname="col6">12 587</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">SON</oasis:entry>
         <oasis:entry colname="col3">0.89</oasis:entry>
         <oasis:entry colname="col4">0.027</oasis:entry>
         <oasis:entry colname="col5">0.180</oasis:entry>
         <oasis:entry colname="col6">13 073</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">ANN</oasis:entry>
         <oasis:entry colname="col3">0.95</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.012</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.150</oasis:entry>
         <oasis:entry colname="col6">13 062</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CO</oasis:entry>
         <oasis:entry colname="col2">DJF</oasis:entry>
         <oasis:entry colname="col3">0.77</oasis:entry>
         <oasis:entry colname="col4">0.098</oasis:entry>
         <oasis:entry colname="col5">0.171</oasis:entry>
         <oasis:entry colname="col6">12 081</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">MAM</oasis:entry>
         <oasis:entry colname="col3">0.82</oasis:entry>
         <oasis:entry colname="col4">0.098</oasis:entry>
         <oasis:entry colname="col5">0.157</oasis:entry>
         <oasis:entry colname="col6">11 623</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">JJA</oasis:entry>
         <oasis:entry colname="col3">0.75</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M127" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.011</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.130</oasis:entry>
         <oasis:entry colname="col6">11 618</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">SON</oasis:entry>
         <oasis:entry colname="col3">0.75</oasis:entry>
         <oasis:entry colname="col4">0.024</oasis:entry>
         <oasis:entry colname="col5">0.126</oasis:entry>
         <oasis:entry colname="col6">12 467</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">ANN</oasis:entry>
         <oasis:entry colname="col3">0.83</oasis:entry>
         <oasis:entry colname="col4">0.049</oasis:entry>
         <oasis:entry colname="col5">0.112</oasis:entry>
         <oasis:entry colname="col6">12 482</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e2959">Same metrics as in Table <xref ref-type="table" rid="Ch1.T1"/>, showing the scores derived from the comparison between IAGOS-DM and MOCAGE-M (first three columns), then between IAGOS-DM-noW and MOCAGE-M-noW. All the scores reported in this table are based on the IAGOS-DM-noW sampling size <inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mrow><mml:mtext>cells</mml:mtext><mml:mo>,</mml:mo><mml:mtext>noW</mml:mtext></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (last column).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="9">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:colspec colnum="9" colname="col9" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Species</oasis:entry>
         <oasis:entry colname="col2">Season</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M129" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">MNMB</oasis:entry>
         <oasis:entry colname="col5">FGE</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M130" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>noW</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:msub><mml:mtext>MNMB</mml:mtext><mml:mtext>noW</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:msub><mml:mtext>FGE</mml:mtext><mml:mtext>noW</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col9"><inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mrow><mml:mtext>cells</mml:mtext><mml:mo>,</mml:mo><mml:mtext>noW</mml:mtext></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M134" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">DJF</oasis:entry>
         <oasis:entry colname="col3">0.95</oasis:entry>
         <oasis:entry colname="col4">0.133</oasis:entry>
         <oasis:entry colname="col5">0.182</oasis:entry>
         <oasis:entry colname="col6">0.91</oasis:entry>
         <oasis:entry colname="col7">0.076</oasis:entry>
         <oasis:entry colname="col8">0.219</oasis:entry>
         <oasis:entry colname="col9">10 404</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">MAM</oasis:entry>
         <oasis:entry colname="col3">0.95</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.042</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.165</oasis:entry>
         <oasis:entry colname="col6">0.91</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.101</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8">0.260</oasis:entry>
         <oasis:entry colname="col9">10 293</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">JJA</oasis:entry>
         <oasis:entry colname="col3">0.92</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M137" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.190</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.287</oasis:entry>
         <oasis:entry colname="col6">0.88</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.217</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8">0.354</oasis:entry>
         <oasis:entry colname="col9">10 252</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">SON</oasis:entry>
         <oasis:entry colname="col3">0.90</oasis:entry>
         <oasis:entry colname="col4">0.009</oasis:entry>
         <oasis:entry colname="col5">0.177</oasis:entry>
         <oasis:entry colname="col6">0.84</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M139" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.021</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8">0.232</oasis:entry>
         <oasis:entry colname="col9">10 684</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">ANN</oasis:entry>
         <oasis:entry colname="col3">0.95</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M140" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.021</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.153</oasis:entry>
         <oasis:entry colname="col6">0.92</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M141" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.073</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8">0.224</oasis:entry>
         <oasis:entry colname="col9">11 667</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CO</oasis:entry>
         <oasis:entry colname="col2">DJF</oasis:entry>
         <oasis:entry colname="col3">0.74</oasis:entry>
         <oasis:entry colname="col4">0.120</oasis:entry>
         <oasis:entry colname="col5">0.173</oasis:entry>
         <oasis:entry colname="col6">0.67</oasis:entry>
         <oasis:entry colname="col7">0.182</oasis:entry>
         <oasis:entry colname="col8">0.243</oasis:entry>
         <oasis:entry colname="col9">9 298</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">MAM</oasis:entry>
         <oasis:entry colname="col3">0.79</oasis:entry>
         <oasis:entry colname="col4">0.105</oasis:entry>
         <oasis:entry colname="col5">0.156</oasis:entry>
         <oasis:entry colname="col6">0.72</oasis:entry>
         <oasis:entry colname="col7">0.186</oasis:entry>
         <oasis:entry colname="col8">0.247</oasis:entry>
         <oasis:entry colname="col9">8 896</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">JJA</oasis:entry>
         <oasis:entry colname="col3">0.74</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.013</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.122</oasis:entry>
         <oasis:entry colname="col6">0.63</oasis:entry>
         <oasis:entry colname="col7">0.042</oasis:entry>
         <oasis:entry colname="col8">0.168</oasis:entry>
         <oasis:entry colname="col9">8 977</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">SON</oasis:entry>
         <oasis:entry colname="col3">0.72</oasis:entry>
         <oasis:entry colname="col4">0.035</oasis:entry>
         <oasis:entry colname="col5">0.121</oasis:entry>
         <oasis:entry colname="col6">0.68</oasis:entry>
         <oasis:entry colname="col7">0.077</oasis:entry>
         <oasis:entry colname="col8">0.166</oasis:entry>
         <oasis:entry colname="col9">9 608</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">ANN</oasis:entry>
         <oasis:entry colname="col3">0.81</oasis:entry>
         <oasis:entry colname="col4">0.056</oasis:entry>
         <oasis:entry colname="col5">0.110</oasis:entry>
         <oasis:entry colname="col6">0.71</oasis:entry>
         <oasis:entry colname="col7">0.113</oasis:entry>
         <oasis:entry colname="col8">.178</oasis:entry>
         <oasis:entry colname="col9">10 735</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <?pagebreak page2667?><p id="d1e3464">Table <xref ref-type="table" rid="Ch1.T1"/> gives a synthesis of the biases and associated deviations, for the assessment of MOCAGE-M versus IAGOS-DM. The yearly MNMB equals <inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.012</mml:mn></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math id="M144" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and 0.049 for CO, demonstrating a very good estimation of these two species in the UTLS on a hemispheric scale, especially for <inline-formula><mml:math id="M145" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. More precisely, it shows a balance between positive and negative normalized biases. The yearly fractional gross error (FGE), corresponding to the averaged normalized bias absolute value is also low, with 0.150 and 0.112 for <inline-formula><mml:math id="M146" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and CO, respectively. The seasonal patterns show that metrics linked with CO biases (MNMB and FGE) generally yield values closer to 0, compared to <inline-formula><mml:math id="M147" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. The <inline-formula><mml:math id="M148" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> seasonal behaviour is characterized by a balance between opposite seasons: the most positive (negative) bias takes place in winter (summer) and is equal to 0.144 (<inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.169</mml:mn></mml:mrow></mml:math></inline-formula>), whereas the less negative (positive) bias takes place in spring (fall) and is equal to <inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.033</mml:mn></mml:mrow></mml:math></inline-formula> (0.027). CO mixing ratio is slightly overestimated in winter and spring similarly (<inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:mtext>MNMB</mml:mtext><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.098</mml:mn></mml:mrow></mml:math></inline-formula>), with lower biases during summer (<inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.011</mml:mn></mml:mrow></mml:math></inline-formula>) and fall (0.024). Nevertheless, all MNMB and FGE are very low, showing good skills from the MOCAGE REF-C1SD simulation.</p>
      <p id="d1e3577">Table <xref ref-type="table" rid="Ch1.T2"/> compares the assessment of MOCAGE-M versus IAGOS-DM with the assessment of MOCAGE-M-noW versus IAGOS-DM-noW versions. This comparison is based on the IAGOS-DM-noW sampling level. In Table <xref ref-type="table" rid="Ch1.T2"/>, the comparison between the two methods shows a better agreement between the model and the observations when we apply the interpolation with the weighting factors. The <inline-formula><mml:math id="M153" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> correlation with the “noW” products decreased to 0.84–0.92 compared to the 0.90–0.95 derived from our method, and the CO correlation dropped from 0.72–0.81 down to 0.63–0.72. The MNMB and the FGE show better scores for the “noW” products in each case, except the <inline-formula><mml:math id="M154" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> MNMB in DJF. The<?pagebreak page2668?> general improvement of normalized biases, normalized errors and spatial correlations, compared to a simplified gridding method, suggests that the use of a weighting function in our methodology can significantly enhance the model assessment.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Regional-scale analysis</title>
      <p id="d1e3614">In this section, we attempt to evaluate the simulation in the UT and the LS separately, focusing on the seasonal cycles. For this, we sort both data sets between the two layers as explained in Sect. <xref ref-type="sec" rid="Ch1.S3.SS4"/>. As a first step, before comparing the simulation to the observations, we analyse the impact of the mapping method for IAGOS onto the MOCAGE grid on a monthly basis. For this purpose, two versions of the IAGOS data set are used. Hereafter, IAGOS-HR refers to the high-resolved IAGOS data synthesized in <xref ref-type="bibr" rid="bib1.bibx6" id="text.58"/>, where every single measurement was categorized as belonging to the UT (<inline-formula><mml:math id="M155" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mtext>TP</mml:mtext></mml:msub><mml:mo>+</mml:mo><mml:mn mathvariant="normal">15</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow><mml:mo>&lt;</mml:mo><mml:mi>P</mml:mi><mml:mo>&lt;</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mtext>TP</mml:mtext></mml:msub><mml:mo>+</mml:mo><mml:mn mathvariant="normal">75</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>), the tropopause transition layer or the LS (<inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>&lt;</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mtext>TP</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:mn mathvariant="normal">15</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>), and where regional monthly means were derived by averaging<?pagebreak page2669?> all the concentrations measured above the defined region. In contrast, IAGOS-DM refers to the new product presented in this paper, i.e. the IAGOS data distributed onto the model's grid, then assigned to either the UT or the LS based on the monthly averaged PV at each model grid point. Note that IAGOS-HR seasonal cycles were computed on the original regions' coordinates, but the changes induced by the <inline-formula><mml:math id="M157" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> difference in some of the regions are expected to be negligible, based on the geographical sensitivity tests mentioned in <xref ref-type="bibr" rid="bib1.bibx6" id="text.59"/>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><?xmltex \currentcnt{7}?><?xmltex \def\figurename{Figure}?><label>Figure 7</label><caption><p id="d1e3702">Mean seasonal cycles in ozone above the eight regions from 1995 to 2013, in the UT for panels <bold>(d–f)</bold> and in the LS for panels <bold>(a–c)</bold>. Solid and dashed lines correspond to mean values and their interannual variabilities, respectively. Panels <bold>(a, d)</bold> correspond to the high-resolution IAGOS data set (IAGOS-HR) presented in <xref ref-type="bibr" rid="bib1.bibx6" id="text.60"/>; panels <bold>(b, e)</bold> correspond to IAGOS-DM. Panels <bold>(c, f)</bold> represent the cycles derived from the simulation (MOCAGE-M) using the same grid points as in IAGOS-DM. The legend is shown at the bottom. For each region, the <inline-formula><mml:math id="M158" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> integer indicates the amount of selected years contributing to the IAGOS-DM mean seasonal cycles in the UT.</p></caption>
          <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f07.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><?xmltex \currentcnt{8}?><?xmltex \def\figurename{Figure}?><label>Figure 8</label><caption><p id="d1e3739">Same as Fig. <xref ref-type="fig" rid="Ch1.F7"/> for carbon monoxide from 2002 to 2013.</p></caption>
          <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f08.png"/>

        </fig>

      <p id="d1e3751">The comparison between the two IAGOS products in the matter of seasonal cycles is proposed in Figs. <xref ref-type="fig" rid="Ch1.F7"/> and <xref ref-type="fig" rid="Ch1.F8"/>, respectively, for <inline-formula><mml:math id="M159" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and CO. They are shown with their corresponding interannual variability (IAV), defined as a year-to-year standard deviation. For complementary information, a more exhaustive representation is proposed in Figs. <xref ref-type="fig" rid="App1.Ch1.S3.F21"/> and <xref ref-type="fig" rid="App1.Ch1.S3.F22"/> in the Appendix, showing the results with each region in a distinct panel. In Fig. <xref ref-type="fig" rid="Ch1.F7"/>, both IAGOS versions show a summertime <inline-formula><mml:math id="M160" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> maximum in the UT and a springtime maximum in the LS. A lessened contrast between the UT and the LS is observed in IAGOS-DM. In the UT, the <inline-formula><mml:math id="M161" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> volume mixing ratio and its interannual variability are higher in IAGOS-DM than in IAGOS-HR for the winter and fall seasons (<inline-formula><mml:math id="M162" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">60</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> compared to <inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">50</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> ppb), whereas they are similar in spring and summer. In this layer, the most important differences between the two versions thus take place during lower-ozone seasons.</p>
      <p id="d1e3826">In the LS, the <inline-formula><mml:math id="M164" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> amounts are lower in IAGOS-DM (<inline-formula><mml:math id="M165" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">110</mml:mn></mml:mrow></mml:math></inline-formula>–375 ppb) than in IAGOS-HR (<inline-formula><mml:math id="M166" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">150</mml:mn></mml:mrow></mml:math></inline-formula>–450 ppb) during the whole year. There are two main reasons that explain the lower <inline-formula><mml:math id="M167" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> amounts in the LS and the higher amounts in the UT in IAGOS-DM compared to IAGOS-HR. The first is  the projection of IAGOS observations with a very fine vertical resolution onto the MOCAGE vertical grid with a <inline-formula><mml:math id="M168" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">800</mml:mn></mml:mrow></mml:math></inline-formula> m vertical resolution. Second, the use of a monthly PV cannot provide the description of the day-to-day variations of the tropopause altitude, whereas the latter can be important to sort the data points between the two layers. In other words, the effect of time averaging leads to a loss of tropopause sharpness, thus resulting in a misclassification of a non-negligible part of the individual measurements. For a given layer, it introduces a bias due to unexpected mixing with another layer. Figure <xref ref-type="fig" rid="Ch1.F7"/> also makes it possible to compare the<?pagebreak page2670?> behaviour of each region. In the LS, the differences between northern and southern regions shown in IAGOS-HR are generally also visible in IAGOS-DM. The regional behaviours discussed in <xref ref-type="bibr" rid="bib1.bibx6" id="text.61"/>, i.e. the low summertime <inline-formula><mml:math id="M169" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratio in the northwestern North American UT and in the Middle Eastern LS remain visible in IAGOS-DM, although the last one is substantially less pronounced. We also note high ozone values in November in the Siberian UT seen by IAGOS-DM only. It is linked to a strong positive anomaly in November 1997 due to an upper-layer air mass that could not be differentiated to the UT, and weakly balanced by the average with too few other years. In Fig. <xref ref-type="fig" rid="Ch1.F8"/>, the CO seasonal cycles in the UT are consistent between IAGOS-HR and IAGOS-DM, with a generally low difference, a common springtime maximum and a consistent inter-regional variability: a higher CO level in the two regions on the Pacific coast (northwestern North America and northeastern Asia), higher summertime amounts in northeastern Asia, and lower CO levels in one of the two southernmost regions (the Middle East). Note that the monthly resolution of both PV and filtering leads to a lessened sampling in the UT in IAGOS-DM. In the North Atlantic region where aircraft trajectories describe a narrow altitude range, the resulting seasonal cycles were incomplete, so we chose to exclude them from both figures. We applied the same treatment to CO in the UT above the western Mediterranean Basin and Siberia, where the level of sampling during winter and spring (not shown) is insufficient to provide complete seasonal cycles. In the LS, the CO mixing ratio is always higher in IAGOS-DM (<inline-formula><mml:math id="M170" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">50</mml:mn></mml:mrow></mml:math></inline-formula>–95 ppb) than in IAGOS-HR (from <inline-formula><mml:math id="M171" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula> up to 65 ppb). In IAGOS-HR, a seasonal cycle is noticeable only in the Middle East and northeastern Asia, whereas it is the case for almost every region in IAGOS-DM. The influence of the troposphere is increased in IAGOS-DM, with a high peak in May for the western Mediterranean Basin, in June–July for northeastern Asia and in July for Siberia, likely related to the effects of boreal biomass burning in the latter. Thus, mapping the observations onto the model grid  significantly changes the CO seasonal cycles in the LS.</p>
      <?pagebreak page2672?><p id="d1e3920">As for <inline-formula><mml:math id="M172" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, the reason why the CO amounts in IAGOS-DM are higher in the LS and lower in the UT comes from the coarse vertical resolution in the MOCAGE grid and from the uncertainty when sorting the UT data from the LS data using a monthly mean modelled PV field. More generally, the comparison between IAGOS-HR and IAGOS-DM for <inline-formula><mml:math id="M173" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and CO clearly shows that the processing applied for mapping the IAGOS high-resolution data set onto the MOCAGE coarse grid slightly modifies IAGOS characteristics. This processing, which enables a meaningful comparison between IAGOS long-term measurements and the REF-C1SD simulation, acts as a numerical filter. It is important to note that the seasonal cycles in IAGOS-DM generally show values ranging between the MOCAGE-M and the IAGOS-HR cycles, such as the yearly means in Table <xref ref-type="table" rid="Ch1.T3"/>, especially in the LS where the mean <inline-formula><mml:math id="M174" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> bias drops from 84 ppb with IAGOS-HR down to 19 ppb with IAGOS-DM. The correlation in time also tends to be enhanced by the use of the IAGOS-DM product. It confirms that the representation derived from IAGOS-HR cannot be reached by a model with the typical REF-C1SD resolution, especially for CO in the LS, but some main characteristics mentioned above can still be used as criteria. Last, the comparison synthesized in Table <xref ref-type="table" rid="Ch1.T4"/> also shows a better consistency between model and observations when our method is applied, mainly in the matter of biases in the LS. No significant change is observed in the UT.</p>
      <p id="d1e3960">We now assess the MOCAGE-M seasonal cycles by comparing them to IAGOS-DM. As complements to Fig. <xref ref-type="fig" rid="Ch1.F7"/>, statistical results are given in Table <xref ref-type="table" rid="Ch1.T3"/>. Note that averages calculated over all represented regions have been computed only to synthesize the assessment and to provide a quantification that confirms some features seen in the figures. As they are similar to the zonal averages, they are not meant to have a geophysical signification. A qualitative summary is also provided in Table <xref ref-type="table" rid="Ch1.T5"/>. In the UT, MOCAGE-M shows a springtime maximum and higher <inline-formula><mml:math id="M175" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations (from <inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">120</mml:mn></mml:mrow></mml:math></inline-formula> ppb up to 130 ppb), instead of the observed summertime maximum (the season in which <inline-formula><mml:math id="M177" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> values range between <inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">80</mml:mn></mml:mrow></mml:math></inline-formula> and 110 ppb). Adding the fact that simulated <inline-formula><mml:math id="M179" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> levels are particularly strong in the northernmost regions (western North America and Siberia) where the stratosphere at the cruise levels is richer in <inline-formula><mml:math id="M180" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, it is likely that the stratospheric influence on the UT is overestimated in the simulation. The inter-regional averages shown in Table <xref ref-type="table" rid="Ch1.T3"/> confirm the significant difference between the two data sets in the UT, both from the <inline-formula><mml:math id="M181" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratio (<inline-formula><mml:math id="M182" display="inline"><mml:mrow><mml:mn mathvariant="normal">97</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> ppb in MOCAGE-M compared to <inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:mn mathvariant="normal">72</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">9</mml:mn></mml:mrow></mml:math></inline-formula> ppb in IAGOS-DM) and from the seasonality (<inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>r</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.35</mml:mn></mml:mrow></mml:math></inline-formula>).
In the LS, the simulation reproduces well the cycles including the seasonality (<inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>r</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.84</mml:mn></mml:mrow></mml:math></inline-formula> as shown in Table <xref ref-type="table" rid="Ch1.T3"/>), the magnitude, the amounts of ozone (<inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:mn mathvariant="normal">203</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">23</mml:mn></mml:mrow></mml:math></inline-formula> ppb compared to <inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:mn mathvariant="normal">222</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">36</mml:mn></mml:mrow></mml:math></inline-formula> ppb from IAGOS-DM) and the inter-regional differences. The latter are characterized in both data sets by lower ozone levels in the two southernmost regions (western Mediterranean Basin and the Middle East) and higher ozone levels in the two northernmost regions  (western North America and Siberia). Without the noisy signal characterizing western North America and the western Mediterranean Basin in IAGOS-DM, the interval representing the springtime interannual variabilities spreads from <inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> ppb up to <inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">400</mml:mn></mml:mrow></mml:math></inline-formula> ppb in both data sets, showing another feature well reproduced by the model. Though on a yearly basis, according to Table <xref ref-type="table" rid="Ch1.T3"/>, the model tends to underestimate ozone IAV on average by a factor of 1.6.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><?xmltex \currentcnt{3}?><label>Table 3</label><caption><p id="d1e4154">Cross-regional averages derived from the seasonal cycles. Yearly mean values and interannual variabilities are shown for IAGOS-HR, IAGOS-DM and MOCAGE-M, along with the correlation coefficient between MOCAGE-M and the two IAGOS versions.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Species</oasis:entry>
         <oasis:entry colname="col2">Layer</oasis:entry>
         <oasis:entry colname="col3">IAGOS-HR</oasis:entry>
         <oasis:entry colname="col4">IAGOS-DM</oasis:entry>
         <oasis:entry colname="col5">MOCAGE-M</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>r</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mtext>IAGOS-HR</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M191" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>r</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mtext>IAGOS-DM</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M192" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (ppb)</oasis:entry>
         <oasis:entry colname="col2">LS</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M193" display="inline"><mml:mrow><mml:mn mathvariant="normal">287</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">33</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:mn mathvariant="normal">222</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">36</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:mn mathvariant="normal">203</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">23</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">0.70</oasis:entry>
         <oasis:entry colname="col7">0.84</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">UT</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:mn mathvariant="normal">62</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M197" display="inline"><mml:mrow><mml:mn mathvariant="normal">72</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M198" display="inline"><mml:mrow><mml:mn mathvariant="normal">97</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">0.14</oasis:entry>
         <oasis:entry colname="col7">0.35</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CO (ppb)</oasis:entry>
         <oasis:entry colname="col2">LS</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M199" display="inline"><mml:mrow><mml:mn mathvariant="normal">51</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M200" display="inline"><mml:mrow><mml:mn mathvariant="normal">66</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M201" display="inline"><mml:mrow><mml:mn mathvariant="normal">72</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">0.28</oasis:entry>
         <oasis:entry colname="col7">0.31</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">UT</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M202" display="inline"><mml:mrow><mml:mn mathvariant="normal">104</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M203" display="inline"><mml:mrow><mml:mn mathvariant="normal">101</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M204" display="inline"><mml:mrow><mml:mn mathvariant="normal">109</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">0.63</oasis:entry>
         <oasis:entry colname="col7">0.58</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><?xmltex \currentcnt{4}?><label>Table 4</label><caption><p id="d1e4464">As in Table <xref ref-type="table" rid="Ch1.T3"/> for IAGOS-DM and MOCAGE-M derived without weighting (IAGOS-DM-noW and MOCAGE-M-noW).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Species</oasis:entry>
         <oasis:entry colname="col2">Layer</oasis:entry>
         <oasis:entry colname="col3">IAGOS-DM-noW</oasis:entry>
         <oasis:entry colname="col4">MOCAGE-M-noW</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M205" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>r</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mtext>noW</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M206" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (ppb)</oasis:entry>
         <oasis:entry colname="col2">LS</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M207" display="inline"><mml:mrow><mml:mn mathvariant="normal">235</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">39</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M208" display="inline"><mml:mrow><mml:mn mathvariant="normal">181</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.84</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">UT</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M209" display="inline"><mml:mrow><mml:mn mathvariant="normal">72</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M210" display="inline"><mml:mrow><mml:mn mathvariant="normal">98</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.34</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CO (ppb)</oasis:entry>
         <oasis:entry colname="col2">LS</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M211" display="inline"><mml:mrow><mml:mn mathvariant="normal">63</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M212" display="inline"><mml:mrow><mml:mn mathvariant="normal">77</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.25</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">UT</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M213" display="inline"><mml:mrow><mml:mn mathvariant="normal">101</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M214" display="inline"><mml:mrow><mml:mn mathvariant="normal">110</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.54</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T5" specific-use="star"><?xmltex \currentcnt{5}?><label>Table 5</label><caption><p id="d1e4684">Synthesis of MOCAGE-M ability to reproduce the main features from IAGOS-DM.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Species</oasis:entry>
         <oasis:entry colname="col2">Layer</oasis:entry>
         <oasis:entry colname="col3">Main features from IAGOS-DM</oasis:entry>
         <oasis:entry colname="col4">Reproduced by MOCAGE-M</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M215" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">LS</oasis:entry>
         <oasis:entry colname="col3">Springtime maxima</oasis:entry>
         <oasis:entry colname="col4">Yes</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Northward gradient</oasis:entry>
         <oasis:entry colname="col4">Yes</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">UT</oasis:entry>
         <oasis:entry colname="col3">Summertime maxima</oasis:entry>
         <oasis:entry colname="col4">No</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Less <inline-formula><mml:math id="M216" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in WNAm summer</oasis:entry>
         <oasis:entry colname="col4">No</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">More <inline-formula><mml:math id="M217" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in Sib</oasis:entry>
         <oasis:entry colname="col4">Yes</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CO</oasis:entry>
         <oasis:entry colname="col2">LS</oasis:entry>
         <oasis:entry colname="col3">Summertime maxima</oasis:entry>
         <oasis:entry colname="col4">No</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">More CO in WMed</oasis:entry>
         <oasis:entry colname="col4">No</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">More CO in NEAs summer</oasis:entry>
         <oasis:entry colname="col4">Yes</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">UT</oasis:entry>
         <oasis:entry colname="col3">Springtime maxima</oasis:entry>
         <oasis:entry colname="col4">Yes (winter–spring)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">More CO in WNAm and NEAs</oasis:entry>
         <oasis:entry colname="col4">Yes</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">Spring–summer maximum in NEAs</oasis:entry>
         <oasis:entry colname="col4">No</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e4903">The modelled CO seasonal cycles (Fig. <xref ref-type="fig" rid="Ch1.F8"/>) in the UT show similarities with the observations (IAGOS-DM), including the higher concentrations in the two Pacific coast regions (western North America and northeastern Asia), the strong summertime concentrations in northeastern Asia and also comparable mixing ratios between the model and the IAGOS-DM observations in most regions, as confirmed by Table <xref ref-type="table" rid="Ch1.T3"/>. However, the simulation overestimates the CO mixing ratios in the two Pacific coast regions, and the seasonal maxima generally take place during late winter–early spring in the simulation, earlier than the observed middle-of-spring maxima. The seasonal minima are in phase with the observations. In the LS, the seasonal cycles' magnitude is underestimated by the simulation but the overall bias remains relatively low, with a <inline-formula><mml:math id="M218" display="inline"><mml:mrow><mml:mn mathvariant="normal">73</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> ppb average for MOCAGE-M compared to <inline-formula><mml:math id="M219" display="inline"><mml:mrow><mml:mn mathvariant="normal">69</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">9</mml:mn></mml:mrow></mml:math></inline-formula> ppb for IAGOS-DM. In most regions, MOCAGE-M shows seasonal cycles in the LS in phase with the UT, thus contrasting with the observations and making the correlation drop from 0.64 in the UT to 0.31 in the LS. This suggests that the model simulation is affected in the LS by transport from the troposphere during springtime. Consistently with observations, MOCAGE-M shows a summertime maximum in northeastern Asia exclusively. Although part of this feature may originate from the positive bias in the UT, the fact that it only concerns the summer season, in contrast to the UT, suggests that summertime convection also plays a non-negligible role.</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Summary and conclusions</title>
      <p id="d1e4944">We developed a methodology that makes the IAGOS database ready to assess chemistry–climate long-term model simulations for recent decades and particularly the REF-C1SD experiment produced in the frame of the CCMI phase 1 project. The current paper describes this methodology and its application on a chosen simulation (the REF-C1SD simulation from MOCAGE-CTM), assessing modelled ozone and carbon monoxide monthly fields during August 1994–December 2013 and December 2001–December 2013, respectively.</p>
      <p id="d1e4947">The first step consists of generating a gridded monthly IAGOS data set (IAGOS-DM), firstly by a linear-distanced reverse interpolation on the chosen model grid on a monthly basis and then by deriving weighted monthly means on each grid cell. The second step consists of deriving seasonal and annual climatologies for the well-sampled vertical grid<?pagebreak page2673?> levels, then to derive statistical scores for the simulation assessment. In the case of the REF-C1SD simulation from MOCAGE, the yearly mean spatial distribution is well reproduced by the model, especially for <inline-formula><mml:math id="M220" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, and especially at the sampled highest levels too. It suggests a particularly good representation of the main stratospheric processes that affect <inline-formula><mml:math id="M221" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in the UTLS. The extreme mean CO mixing ratios observed above the strongly emitting and convective regions in the tropics and subtropics are also visible in the simulation, with a very low bias above tropical Africa and a significant positive bias above South and East Asia. Globally, the annual <inline-formula><mml:math id="M222" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> normalized mean bias is very low (<inline-formula><mml:math id="M223" display="inline"><mml:mrow><mml:mtext>MNMB</mml:mtext><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.012</mml:mn></mml:mrow></mml:math></inline-formula>) and slightly higher seasonally. They are a bit higher in winter and summer (<inline-formula><mml:math id="M224" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:mtext>MNMB</mml:mtext><mml:mo>|</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.144</mml:mn></mml:mrow></mml:math></inline-formula>–0.169) than in spring and fall (<inline-formula><mml:math id="M225" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:mtext>MNMB</mml:mtext><mml:mo>|</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.027</mml:mn></mml:mrow></mml:math></inline-formula>–0.033), with quasi-opposite values in each couple of antagonist seasons. The yearly bias in CO is positive (<inline-formula><mml:math id="M226" display="inline"><mml:mrow><mml:mtext>MNMB</mml:mtext><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.049</mml:mn></mml:mrow></mml:math></inline-formula>), with highest values similarly in winter and spring, and particularly low values in summer and fall. The statistical metrics were applied for each vertical grid level separately in order to locate strengths and weaknesses of the model but also for all UTLS grid cells for the purpose of a bulk comparison that could be reiterated on other model simulations.</p>
      <p id="d1e5042">Another step consists of a comparison of the seasonal cycles between IAGOS observations and the MOCAGE simulation in the upper troposphere (UT) and the lower stratosphere (LS). It relies on the use of a monthly mean calculated PV field to define a UT and a LS separated by a transition layer, following the same principle as in <xref ref-type="bibr" rid="bib1.bibx33" id="text.62"/>. The mean seasonal cycles have been compared over the eight well-sampled regions defined and analysed in <xref ref-type="bibr" rid="bib1.bibx6" id="text.63"/>. The application to the assessment of this REF-C1SD experiment by MOCAGE is preceded by an analysis of the changes induced in IAGOS seasonal cycles by the projection on the model monthly grid. As expected, going from IAGOS-HR to IAGOS-DM systematically leads to an increase (decrease) in upper-tropospheric (lower-stratospheric) <inline-formula><mml:math id="M227" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, to an increase in lower-stratospheric CO and generally to a slight decrease in upper-tropospheric CO. The use of a monthly mean PV field and the <inline-formula><mml:math id="M228" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">800</mml:mn></mml:mrow></mml:math></inline-formula> m vertical resolution in the UTLS of MOCAGE onto which IAGOS observations are projected automatically result in an artificial increase of stratosphere–troposphere exchange. It is explained by the fact that the grid cells in the vicinity of the tropopause are crossed by both tropospheric and stratospheric air masses in the course of a month. It results in a decreased vertical gradient between UT and LS. Nevertheless, the seasonal maxima and minima become less clear but remain visible in IAGOS-DM with respect to IAGOS-HR. The hierarchy between the regions is generally conserved from IAGOS-HR to IAGOS-DM, for both chemical species and both layers: in each of these cases, we find the same regions showing lowest/highest values between the two IAGOS representations. Also, some specific local behaviours mentioned in <xref ref-type="bibr" rid="bib1.bibx6" id="text.64"/> remain visible in IAGOS-DM. Concerning <inline-formula><mml:math id="M229" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, we highlighted the consistency of the lowest quantities in the UT above western North America and, substantially less significant, in the LS above the Middle East. Concerning CO, we showed the conservation of the spring–summer maximum in northeastern Asia in the UT and its summertime maximum in the LS.</p>
      <p id="d1e5087">The evaluation of the MOCAGE REF-C1SD simulation (MOCAGE-M) with IAGOS-DM shows a good representation of <inline-formula><mml:math id="M230" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in the LS in the matter of seasonal cycle magnitudes and geographical variability, thus highlighting the well-reproduced main stratospheric processes. In the UT, for all the regions, the model overestimates the <inline-formula><mml:math id="M231" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratios and shows a typical lower-stratospheric seasonality, suggesting an overestimation in the transport from the stratosphere. The modelled CO field shows similarities with the observations in the UT, with a 1-month shift in the seasonal maxima. One possible reason is the decadal linear interpolation in<?pagebreak page2674?> anthropogenic emissions implemented in REF-C1SD, leading to a lack of year-to-year variability in modelled CO fields. In the LS, CO is generally higher in the simulation and shows a seasonal cycle in phase with the UT, in contrast to IAGOS-DM. It suggests an overestimated tropospheric influence in this layer during springtime.</p>
      <p id="d1e5113">The methodology shown in this paper has proven useful for assessing the REF-C1SD experiment from MOCAGE in the UTLS, further highlighting the model strengths and weaknesses when compared to the densest in situ IAGOS data set in the UTLS. Particularly, the use of the IAGOS-DM product instead of IAGOS-HR systematically reduced the biases characterizing the simulation, thus avoiding an underestimation of the model abilities to reproduce the chemical composition of the UT and the LS in a recent climate time period.</p>
      <p id="d1e5116">The present methodology could be easily applied to CCMI REF-C1SD simulations from other models, both for an intermodel comparison and for assessing CCMI products against the IAGOS database, notably intermodel-averaged fields. To a greater extent, it can be used on a wide range of long-term simulations including both CCMs nudged and free runs in order to perform climatological comparisons. Precaution must be taken while extending this work to the specified-dynamics simulations from CCMs, regarding the loss of consistency between chemical and dynamical variables that is introduced by nudging, as highlighted in <xref ref-type="bibr" rid="bib1.bibx23" id="text.65"/>. Notably, inconsistencies between ozone and potential vorticity are likely to introduce noise in the simulated upper-tropospheric and the lower-stratospheric behaviours. Last, the assessment illustrated in this study is based on two chosen applications of our methodology, i.e. the analyses of long-term seasonal and yearly averages on different vertical grid levels and the mean seasonal cycles in the UT and the LS, but a wide diversity of complementary comparisons remains possible. We thus recommend this new product to the CCMI community.</p><?xmltex \hack{\clearpage}?>
</sec>

      
      </body>
    <back><app-group>

<?pagebreak page2675?><app id="App1.Ch1.S1">
  <?xmltex \currentcnt{A}?><label>Appendix A</label><title>Horizontal climatologies</title>
<sec id="App1.Ch1.S1.SS1">
  <label>A1</label><title>Ozone</title>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F9"><?xmltex \currentcnt{A1}?><?xmltex \def\figurename{Figure}?><label>Figure A1</label><caption><p id="d1e5143">As Fig. <xref ref-type="fig" rid="Ch1.F3"/> for boreal winter.</p></caption>
          <?xmltex \hack{\hsize\textwidth}?>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f09.png"/>

        </fig>

<?xmltex \hack{\clearpage}?><?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F10"><?xmltex \currentcnt{A2}?><?xmltex \def\figurename{Figure}?><label>Figure A2</label><caption><p id="d1e5159">As Fig. <xref ref-type="fig" rid="Ch1.F3"/> for boreal spring.</p></caption>
          <?xmltex \hack{\hsize\textwidth}?>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f10.png"/>

        </fig>

<?xmltex \hack{\clearpage}?><?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F11"><?xmltex \currentcnt{A3}?><?xmltex \def\figurename{Figure}?><label>Figure A3</label><caption><p id="d1e5176">As Fig. <xref ref-type="fig" rid="Ch1.F3"/> for boreal summer.</p></caption>
          <?xmltex \hack{\hsize\textwidth}?>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f11.png"/>

        </fig>

<?xmltex \hack{\clearpage}?><?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F12"><?xmltex \currentcnt{A4}?><?xmltex \def\figurename{Figure}?><label>Figure A4</label><caption><p id="d1e5192">As Fig. <xref ref-type="fig" rid="Ch1.F3"/> for boreal fall.</p></caption>
          <?xmltex \hack{\hsize\textwidth}?>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f12.png"/>

        </fig>

<?xmltex \hack{\clearpage}?>
</sec>
<?pagebreak page2679?><sec id="App1.Ch1.S1.SS2">
  <label>A2</label><title>Carbon monoxide</title>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F13"><?xmltex \currentcnt{A5}?><?xmltex \def\figurename{Figure}?><label>Figure A5</label><caption><p id="d1e5217">As Fig. <xref ref-type="fig" rid="Ch1.F4"/> for boreal winter.</p></caption>
          <?xmltex \hack{\hsize\textwidth}?>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f13.png"/>

        </fig>

<?xmltex \hack{\clearpage}?><?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F14"><?xmltex \currentcnt{A6}?><?xmltex \def\figurename{Figure}?><label>Figure A6</label><caption><p id="d1e5233">As Fig. <xref ref-type="fig" rid="Ch1.F4"/> for boreal spring.</p></caption>
          <?xmltex \hack{\hsize\textwidth}?>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f14.png"/>

        </fig>

<?xmltex \hack{\clearpage}?><?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F15"><?xmltex \currentcnt{A7}?><?xmltex \def\figurename{Figure}?><label>Figure A7</label><caption><p id="d1e5250">As Fig. <xref ref-type="fig" rid="Ch1.F4"/> for boreal summer.</p></caption>
          <?xmltex \hack{\hsize\textwidth}?>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f15.png"/>

        </fig>

<?xmltex \hack{\clearpage}?><?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F16"><?xmltex \currentcnt{A8}?><?xmltex \def\figurename{Figure}?><label>Figure A8</label><caption><p id="d1e5266">As Fig. <xref ref-type="fig" rid="Ch1.F4"/> for boreal fall.</p></caption>
          <?xmltex \hack{\hsize\textwidth}?>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f16.png"/>

        </fig>

<?xmltex \hack{\clearpage}?>
</sec>
</app>

<?pagebreak page2683?><app id="App1.Ch1.S2">
  <?xmltex \currentcnt{B}?><label>Appendix B</label><title>Scatterplots</title>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S2.F17"><?xmltex \currentcnt{B1}?><?xmltex \def\figurename{Figure}?><label>Figure B1</label><caption><p id="d1e5292">As Fig. <xref ref-type="fig" rid="Ch1.F5"/> for boreal winter.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f17.png"/>

      </fig>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S2.F18"><?xmltex \currentcnt{B2}?><?xmltex \def\figurename{Figure}?><label>Figure B2</label><caption><p id="d1e5305">As Fig. <xref ref-type="fig" rid="Ch1.F5"/> for boreal spring.</p></caption>
        <?xmltex \hack{\vspace{-39mm}}?>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f18.png"/>

      </fig>

<?xmltex \hack{\clearpage}?><?xmltex \floatpos{t}?><fig id="App1.Ch1.S2.F19"><?xmltex \currentcnt{B3}?><?xmltex \def\figurename{Figure}?><label>Figure B3</label><caption><p id="d1e5322">As Fig. <xref ref-type="fig" rid="Ch1.F5"/> for boreal summer. The two extremely high CO values seen by IAGOS-DM above Alaska at level 25 (350 and 510 ppb) in Fig. <xref ref-type="fig" rid="App1.Ch1.S1.F15"/> have been excluded from the scatterplots because they were considered outliers.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f19.png"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="App1.Ch1.S2.F20"><?xmltex \currentcnt{B4}?><?xmltex \def\figurename{Figure}?><label>Figure B4</label><caption><p id="d1e5337">As Fig. <xref ref-type="fig" rid="Ch1.F5"/> for boreal fall.</p></caption>
        <?xmltex \hack{\vspace{-13mm}}?>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f20.png"/>

      </fig>

<?xmltex \hack{\clearpage}?>
</app>

<?pagebreak page2685?><app id="App1.Ch1.S3">
  <?xmltex \currentcnt{C}?><label>Appendix C</label><title>Seasonal cycles</title>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S3.F21"><?xmltex \currentcnt{C1}?><?xmltex \def\figurename{Figure}?><label>Figure C1</label><caption><p id="d1e5362">Mean seasonal cycles in the UT. <inline-formula><mml:math id="M232" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is represented in the left two columns, and CO is in the right columns. Each graphic gathers the data from IAGOS-HR (grey), IAGOS-DM (black) and MOCAGE-M (red) in one given region. The solid lines illustrate the mean values, and the dashed lines show the uncertainties regarding the interannual variability. The mean values are shown only if they are derived from several monthly means.</p></caption>
        <?xmltex \hack{\hsize\textwidth}?>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f21.png"/>

      </fig>

<?xmltex \hack{\clearpage}?><?xmltex \floatpos{h!}?><fig id="App1.Ch1.S3.F22"><?xmltex \currentcnt{C2}?><?xmltex \def\figurename{Figure}?><label>Figure C2</label><caption><p id="d1e5387">As Fig. <xref ref-type="fig" rid="App1.Ch1.S3.F21"/> for the LS.</p></caption>
        <?xmltex \hack{\hsize\textwidth}?>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/14/2659/2021/gmd-14-2659-2021-f22.png"/>

      </fig>

<?xmltex \hack{\clearpage}?>
</app>
  </app-group><notes notes-type="codedataavailability"><title>Code and data availability</title>

      <p id="d1e5406">The IAGOS ozone and carbon monoxide data are available at <ext-link xlink:href="https://doi.org/10.25326/20" ext-link-type="DOI">10.25326/20</ext-link> (<xref ref-type="bibr" rid="bib1.bibx24" id="altparen.66"/>),  and more precisely, the time series data can be found at <ext-link xlink:href="https://doi.org/10.25326/06" ext-link-type="DOI">10.25326/06</ext-link> <xref ref-type="bibr" rid="bib1.bibx5" id="paren.67"/>. The IAGOS-DM product adapted to the MOCAGE model grid (named IAGOS-DM-MOCAGE) is available at <ext-link xlink:href="https://doi.org/10.25326/80" ext-link-type="DOI">10.25326/80</ext-link> <xref ref-type="bibr" rid="bib1.bibx7" id="paren.68"/>, and the software (named Interpol-IAGOS) is available at <ext-link xlink:href="https://doi.org/10.25326/81" ext-link-type="DOI">10.25326/81</ext-link> <xref ref-type="bibr" rid="bib1.bibx8" id="paren.69"/>.</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e5437">YC, VM, BJ and VT designed the study. The Interpol-IAGOS software was developed by YC. The simulation output was provided by BJ and VM, and the IAGOS data by VT. The paper was written by YC and reviewed by VM and VT, and commented, edited and approved by all the authors.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e5443">The authors declare that they have no conflict of interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e5449">The authors acknowledge the strong support of the European Commission, Airbus and the airlines (Lufthansa, Air France, Austrian, Air Namibia, Cathay Pacific, Iberia and China Airlines so far) who have carried the MOZAIC or IAGOS equipment and performed the maintenance since 1994. In its last 10 years of operation, MOZAIC has been funded by INSU-CNRS (France), Météo-France, Université Paul Sabatier (Toulouse, France) and Research Center Jülich (FZJ, Jülich, Germany). IAGOS has been additionally funded by the EU projects IAGOS-DS and IAGOS-ERI. We also wish to acknowledge our colleagues from the IAGOS team at FZJ for useful discussions. The MOZAIC–IAGOS database is supported by AERIS (CNES and INSU-CNRS). Data are also available via the AERIS website <uri>https://www.aeris-data.fr</uri> (last access: 6 September 2018). Yann Cohen acknowledges the University of Toulouse for providing administrative support for his PhD. The authors acknowledge the reviewers for their fruitful comments.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e5457">This research has been supported by Météo-France and the Occitanie region.</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e5463">This paper was edited by Juan Antonio Añel and reviewed by two anonymous referees.</p>
  </notes><ref-list>
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    <!--<article-title-html>Interpol-IAGOS: a new method for assessing long-term chemistry–climate simulations in the UTLS based on IAGOS data, and its application to the MOCAGE CCMI REF-C1SD simulation</article-title-html>
<abstract-html><p>A wide variety of observation data sets are used to assess long-term simulations provided by chemistry–climate models (CCMs) and chemistry-transport models (CTMs). However, the upper troposphere–lower stratosphere (UTLS) has hardly been assessed in these modelling exercises yet. Observations performed in the framework of IAGOS (In-service Aircraft for a Global Observing System) combine the advantages of in situ airborne measurements in the UTLS with an almost-global-scale sampling, a  ∼ 20-year monitoring period and a high frequency. Even though a few model assessments have been made using the IAGOS database, none of them took advantage of the dense and high-resolution cruise data in their whole ensemble yet. The present study proposes a method to compare this large IAGOS data set to long-term simulations used for chemistry–climate studies. As a first application, the REF-C1SD reference simulation generated by the MOCAGE (MOdèle de Chimie Atmosphérique à Grande Echelle) CTM in the framework of Chemistry-Climate Model Initiative (CCMI) phase I has been evaluated during the 1994–2013 period for ozone (O<sub>3</sub>) and the 2002–2013 period for carbon monoxide (CO). The concept of the new comparison software proposed here (so-called Interpol-IAGOS) is to project all IAGOS data onto the 3-D grid of the model with a monthly resolution, since generally the 3-D outputs provided by chemistry–climate models for multi-model comparisons on multi-decadal timescales are archived as monthly means. This provides a new IAGOS data set (IAGOS-DM) mapped onto the model's grid and time resolution. To get a model data set consistent with IAGOS-DM for the comparison, a subset of the model's outputs is created (MOCAGE-M) by applying a mask that retains only the model data at the available IAGOS-DM grid points.</p><p>Climatologies are derived from the IAGOS-DM product, and good correlations are reported between with the MOCAGE-M spatial distributions. As an attempt to analyse MOCAGE-M behaviour in the upper troposphere (UT) and the lower stratosphere (LS) separately, UT and LS data in IAGOS-DM were sorted according to potential vorticity. From this, we derived O<sub>3</sub> and CO seasonal cycles in eight regions well sampled by IAGOS flights in the northern midlatitudes. They are remarkably well reproduced by the model for lower-stratospheric O<sub>3</sub> and also good for upper-tropospheric CO.</p><p>Along this model evaluation, we also assess the differences caused by the use of a weighting function in the method when projecting the IAGOS data onto the model grid compared to the scores derived in a simplified way. We conclude that the data projection onto the model's grid allows us to filter out biases arising from either spatial or temporal resolution, and the use of a weighting function yields different results, here by enhancing the assessment scores. Beyond the MOCAGE REF-C1SD evaluation presented in this paper, the method could be used by CCMI models for individual assessments in the UTLS and for model intercomparisons with respect to the IAGOS data set.</p></abstract-html>
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