<?xml version="1.0" encoding="UTF-8"?>
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<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0"><?xmltex \makeatother\@nolinetrue\makeatletter?>
  <front>
    <journal-meta><journal-id journal-id-type="publisher">GMD</journal-id><journal-title-group>
    <journal-title>Geoscientific Model Development</journal-title>
    <abbrev-journal-title abbrev-type="publisher">GMD</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Geosci. Model Dev.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1991-9603</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/gmd-13-5917-2020</article-id><title-group><article-title>On the tuning of atmospheric inverse methods: comparisons with the European Tracer Experiment (ETEX) and Chernobyl datasets using the atmospheric  transport model FLEXPART</article-title><alt-title>On the tuning of atmospheric inverse methods</alt-title>
      </title-group><?xmltex \runningtitle{On the tuning of atmospheric inverse methods}?><?xmltex \runningauthor{O.~Tich\'{y} et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Tichý</surname><given-names>Ondřej</given-names></name>
          <email>otichy@utia.cas.cz</email>
        <ext-link>https://orcid.org/0000-0003-3625-3926</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Ulrych</surname><given-names>Lukáš</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Šmídl</surname><given-names>Václav</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Evangeliou</surname><given-names>Nikolaos</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7196-1018</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Stohl</surname><given-names>Andreas</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-2524-5755</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Institute of Information Theory and Automation, Czech Academy of Sciences, Prague, Czech Republic</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>NILU: Norwegian Institute for Air Research, Kjeller, Norway</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Department of Meteorology and Geophysics, University of Vienna, Vienna, Austria</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Ondřej Tichý (otichy@utia.cas.cz)</corresp></author-notes><pub-date><day>1</day><month>December</month><year>2020</year></pub-date>
      
      <volume>13</volume>
      <issue>12</issue>
      <fpage>5917</fpage><lpage>5934</lpage>
      <history>
        <date date-type="received"><day>26</day><month>April</month><year>2020</year></date>
           <date date-type="rev-request"><day>29</day><month>June</month><year>2020</year></date>
           <date date-type="rev-recd"><day>2</day><month>October</month><year>2020</year></date>
           <date date-type="accepted"><day>20</day><month>October</month><year>2020</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2020 </copyright-statement>
        <copyright-year>2020</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://gmd.copernicus.org/articles/.html">This article is available from https://gmd.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://gmd.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://gmd.copernicus.org/articles/.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e130">Estimation of the temporal profile of an atmospheric release, also
called the source term, is an important problem in environmental sciences.
The problem can be formalized as a linear inverse problem wherein the
unknown source term is optimized to minimize the difference between
the measurements and the corresponding model predictions. The problem
is typically ill-posed due to low sensor coverage of a release and
due to uncertainties, e.g., in measurements or atmospheric transport
modeling; hence, all state-of-the-art methods are based on some form
of regularization of the problem using additional information. We
consider two kinds of additional information: the prior source term,
also known as the first guess, and regularization parameters for the shape
of the source term. While the first guess is based on information
independent of the measurements, such as the physics of the potential
release or previous estimations, the regularization parameters are
often selected by the designers of the optimization procedure. In
this paper, we provide a sensitivity study of two inverse methodologies
on the choice of the prior source term and regularization parameters
of the methods. The sensitivity is studied in two cases: data from
the European Tracer Experiment (ETEX) using FLEXPART v8.1 and the
caesium-134 and caesium-137 dataset from the Chernobyl accident using
FLEXPART v10.3.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

      <?xmltex \hack{\newpage}?>
<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e144">The source term describes the spatiotemporal distribution of an atmospheric
release, and it is of great interest in the case of an accidental
atmospheric release. The aim of inverse modeling is to reconstruct
the source term by maximization of agreement between the ambient measurements
and prediction of an atmospheric transport model in a so-called top-down
approach <xref ref-type="bibr" rid="bib1.bibx38" id="paren.1"/>. Since information provided by the
measurements is often insufficient in both spatial and temporal domains
<xref ref-type="bibr" rid="bib1.bibx35" id="paren.2"/>, additional information and regularization
of the problem are crucial for a reasonable estimation of the source
term <xref ref-type="bibr" rid="bib1.bibx47" id="paren.3"/>. Otherwise, the top-down determination
of the source term can produce artifacts, often resulting in some
completely implausible values of the source term. One common
regularization is the knowledge of the prior source term, also known
as the first guess, considered within the optimization procedure <xref ref-type="bibr" rid="bib1.bibx15 bib1.bibx31 bib1.bibx9" id="paren.4"/>.
However, this knowledge could dominate the resulting estimate and
even outweigh the information present in the measured data. The aim
of this study is to discuss drawbacks that may arise in setting
the prior source term and to study the sensitivity of inversion methods
to the choice of the prior source term. We utilize the ETEX (European
Tracer Experiment) and Chernobyl datasets for demonstration.</p>
      <p id="d1e159">We assume that the measurements can be explained by a linear model
using the concept of the source–receptor sensitivity (SRS) matrix
calculated from an atmospheric transport model (e.g., <xref ref-type="bibr" rid="bib1.bibx46" id="altparen.5"/>).
The problem can be<?pagebreak page5918?> approached by a constrained optimization with selected
penalization term on the source term <xref ref-type="bibr" rid="bib1.bibx12 bib1.bibx42 bib1.bibx28" id="paren.6"/>
and further with an additional smoothness constraint <xref ref-type="bibr" rid="bib1.bibx15" id="paren.7"/>
used for both spatial <xref ref-type="bibr" rid="bib1.bibx52" id="paren.8"/> and temporal
<xref ref-type="bibr" rid="bib1.bibx47 bib1.bibx53 bib1.bibx18" id="paren.9"/>
profile smoothing. The optimization terms are typically weighted by
covariance matrices whose forms and estimation have been studied in
the literature. Diagonal covariance matrices have been considered by <xref ref-type="bibr" rid="bib1.bibx36" id="text.10"/>
and its entries estimated using the maximum likelihood method. Since the
estimation of full covariance matrices tends to diverge <xref ref-type="bibr" rid="bib1.bibx2" id="paren.11"/>,
approaches using a fixed common autocorrelation timescale parameter
for non-diagonal entries has been introduced <xref ref-type="bibr" rid="bib1.bibx20 bib1.bibx28" id="paren.12"/>
for atmospheric gas inversion. Uncertainties can be also reduced with
the use of ensemble techniques (see, e.g., <xref ref-type="bibr" rid="bib1.bibx19 bib1.bibx7" id="altparen.13"/>,
and references therein) when such an ensemble is available in the
form of several meteorological input datasets and/or variations in
atmospheric model parameters. Even with only one SRS matrix, the problem
can be formulated as a probabilistic hierarchical model with unknown
parameters estimated together with the source term with constraints
such as positivity, sparsity, and smoothness <xref ref-type="bibr" rid="bib1.bibx56" id="paren.14"/>.
The drawback of these methods is the necessity of selection and tuning
of various model parameters, with the selection of the prior source
term and its uncertainty being the most important.</p>
      <p id="d1e193">There are various assumptions on the level of knowledge of the prior
source term used in the inversion procedure. Assumption of the zero
prior source term <xref ref-type="bibr" rid="bib1.bibx4 bib1.bibx56" id="paren.15"/> is common
in the literature with a preference for a zero solution on elements whereby no
sufficient information from data is available. This assumption is
typically formalized as the Tikhonov <xref ref-type="bibr" rid="bib1.bibx22" id="paren.16"/> or
LASSO <xref ref-type="bibr" rid="bib1.bibx55" id="paren.17"/> regularizations or their variants.
Soft assumptions in the form of the scale of the prior source term <xref ref-type="bibr" rid="bib1.bibx12" id="paren.18"/>,
bounds on emissions <xref ref-type="bibr" rid="bib1.bibx37" id="paren.19"/>, or even knowledge
of total released amount as discussed, e.g., in <xref ref-type="bibr" rid="bib1.bibx3" id="text.20"/>
can be considered. One can also assume the ratios between species
in multispecies source term scenarios <xref ref-type="bibr" rid="bib1.bibx43 bib1.bibx57" id="paren.21"/>.
However, the majority of inversion methods explicitly assume knowledge of
the prior source term <xref ref-type="bibr" rid="bib1.bibx11 bib1.bibx15 bib1.bibx31" id="paren.22"/>.
This is more or less justified by appropriate construction of the
prior source term based, for example, on a detailed analysis of an
inventory and accident <xref ref-type="bibr" rid="bib1.bibx53" id="paren.23"/>, on previous estimates
when available <xref ref-type="bibr" rid="bib1.bibx18" id="paren.24"/>, or on measured or observed
data <xref ref-type="bibr" rid="bib1.bibx52" id="paren.25"/>. While in well-documented cases
this approach could be well-justified, in cases with very limited
available information or even complete absence of information on the
source term, such as the iodine occurrence over Europe in 2017 <xref ref-type="bibr" rid="bib1.bibx34" id="paren.26"/>
and the unexpected detection of ruthenium in Europe in 2017 <xref ref-type="bibr" rid="bib1.bibx5 bib1.bibx44" id="paren.27"/>,
the use of strong prior source term assumptions could lead to prior-dominated results with limited validity. Although the choice of the
prior source term is crucial, few studies have discussed the choice
of the prior source term in detail and provided sensitivity studies
on this selection as in <xref ref-type="bibr" rid="bib1.bibx47" id="text.28"/> for the
temporal profile of sulfur dioxide emissions and in <xref ref-type="bibr" rid="bib1.bibx51" id="text.29"/>
for the spatial distribution of greenhouse gas emissions.</p>
      <p id="d1e243">The aim of this paper is to explore the sensitivity of linear inversion
methods to the prior source term selection coupled with tuning of
the covariance matrix representing modeling error. We considered the
optimization method proposed by <xref ref-type="bibr" rid="bib1.bibx15" id="text.30"/>, as well as its
probabilistic counterpart formulated as the hierarchical Bayesian
model, extended here by a nonzero prior source term with
variational Bayes' inference <xref ref-type="bibr" rid="bib1.bibx56" id="paren.31"/> and with Monte Carlo
inference using a Gibbs sampler <xref ref-type="bibr" rid="bib1.bibx58" id="paren.32"/>.
Two real cases will be examined: the ETEX <xref ref-type="bibr" rid="bib1.bibx39" id="paren.33"/> and
Chernobyl <xref ref-type="bibr" rid="bib1.bibx17" id="paren.34"/> datasets. ETEX
provides ideal data for a prior source term sensitivity
study since the emission profile is exactly known. We propose various
modifications of the known prior source term and study their influence
on the results of the selected inversion methods. The Chernobyl dataset, on the other hand, provides a very demanding case in which only consensus
on the release is available and the source term is more speculative.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Inverse modeling using the prior source term</title>
      <?pagebreak page5919?><p id="d1e269">We are concerned with linear models of atmospheric dispersion using
an SRS matrix <xref ref-type="bibr" rid="bib1.bibx45 bib1.bibx62 bib1.bibx46" id="paren.35"/>,
which has been used in inverse modeling <xref ref-type="bibr" rid="bib1.bibx18 bib1.bibx31" id="paren.36"/>.
Here, the atmospheric transport model calculates the linear relationship
between potential sources and atmospheric concentrations. The source–receptor
sensitivity is calculated as <inline-formula><mml:math id="M1" display="inline"><mml:mrow><mml:msub><mml:mi>m</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math id="M2" display="inline"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
is the assumed release from the release site at time <inline-formula><mml:math id="M3" display="inline"><mml:mi>j</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M4" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
is the calculated concentration at a receptor <inline-formula><mml:math id="M5" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> at the respective
time period. The measurement <inline-formula><mml:math id="M6" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> at a given time and location can
be explained as a sum of contributions from all elements of the source
term weighted by <inline-formula><mml:math id="M7" display="inline"><mml:mrow><mml:msub><mml:mi>m</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>. In matrix notation,
          <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M8" display="block"><mml:mrow><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="bold-italic">e</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where <inline-formula><mml:math id="M9" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="normal">ℜ</mml:mi><mml:mi>p</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> is a vector
aggregating measurements
from all locations and times (in arbitrary order), and <inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="normal">ℜ</mml:mi><mml:mi>n</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>
is a vector of all possible releases from a given time period and all
possible source–receptor sensitivities form the SRS matrix <inline-formula><mml:math id="M11" display="inline"><mml:mrow><mml:mi mathvariant="bold">M</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="normal">ℜ</mml:mi><mml:mrow><mml:mi>p</mml:mi><mml:mo>×</mml:mo><mml:mi>n</mml:mi></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>.
The residual model, <inline-formula><mml:math id="M12" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">e</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="normal">ℜ</mml:mi><mml:mi>p</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>, is a sum of model and
measurement errors. While the model looks trivial, its use in practical
applications poses significant challenges. The key reason is that
all elements of the model are subject to uncertainty <xref ref-type="bibr" rid="bib1.bibx60 bib1.bibx31" id="paren.37"/>
and the problem is ill-posed.</p>
      <p id="d1e461">In the rest of this section, we will discuss an influence of the modeling
error and show how existing methods approach compensation of such
error. We will analyze in detail two methods for the source term estimation:
(i) the optimization model proposed by <xref ref-type="bibr" rid="bib1.bibx15" id="text.38"/>
with a prior source term already considered and (ii) a Bayesian model
<xref ref-type="bibr" rid="bib1.bibx56" id="paren.39"/> extended here by prior source term information
and solved using both the variational Bayes' method and the Gibbs sampling
method.</p>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Influence of atmospheric model error</title>
      <p id="d1e477">It is generally assumed that the SRS matrix <inline-formula><mml:math id="M13" display="inline"><mml:mi mathvariant="bold">M</mml:mi></mml:math></inline-formula> is correct
and the true source term minimizes error of <inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi></mml:mrow></mml:math></inline-formula>.
However, <inline-formula><mml:math id="M15" display="inline"><mml:mi mathvariant="bold">M</mml:mi></mml:math></inline-formula> is prone to errors due to a number of approximations
in the formulation of the atmospheric transport model and use of uncertain
weather analysis data as input to the atmospheric transport model.
Therefore, one should rather consider a hypothetical model,
            <disp-formula id="Ch1.E2" content-type="numbered"><label>2</label><mml:math id="M16" display="block"><mml:mrow><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>=</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="bold">M</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M17" display="inline"><mml:mi mathvariant="bold">M</mml:mi></mml:math></inline-formula> is the available estimate of the sensitivity
matrix from a numerical model, and the term <inline-formula><mml:math id="M18" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
is the deviation of the estimate from the true generating matrix,
<inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">M</mml:mi><mml:mtext>true</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. Exact
estimation of <inline-formula><mml:math id="M20" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is not possible due to a lack of
data; however, many existing regularization techniques can be interpreted
as various simplified parameterizations of <inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e600">The L2 norm<fn id="Ch1.Footn1"><p id="d1e603">The analysis can be generalized to a quadratic norm with arbitrary
kernel <inline-formula><mml:math id="M22" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>; however, we will discuss its simpler version
for clarity.</p></fn> of the residuum between measurement and reconstruction for Eq. (<xref ref-type="disp-formula" rid="Ch1.E3"/>)
would become

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M23" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>|</mml:mo><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>|</mml:mo><mml:msubsup><mml:mo>|</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:mo>|</mml:mo><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>|</mml:mo><mml:msubsup><mml:mo>|</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E3"><mml:mtd><mml:mtext>3</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Φ</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:msup><mml:mi mathvariant="bold">M</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi><mml:mi>T</mml:mi></mml:msubsup><mml:mi mathvariant="bold">M</mml:mi><mml:mo>+</mml:mo><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi><mml:mi>T</mml:mi></mml:msubsup><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            The ideal optimization problem (right-hand side of Eq. <xref ref-type="disp-formula" rid="Ch1.E3"/>)
can be decomposed into the norm of residues of the estimated model
<inline-formula><mml:math id="M24" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>|</mml:mo><mml:msubsup><mml:mo>|</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>, with both
linear (i.e., <inline-formula><mml:math id="M25" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi></mml:mrow></mml:math></inline-formula>)
and quadratic  terms in <inline-formula><mml:math id="M26" display="inline"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:math></inline-formula> (i.e., <inline-formula><mml:math id="M27" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi></mml:mrow></mml:math></inline-formula>).
Both of the additional terms contribute to incorrect estimation of
<inline-formula><mml:math id="M28" display="inline"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:math></inline-formula> when <inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is significant.</p>
      <p id="d1e854">An common attempt to minimize the influence of the linear term is
to define the prior source term <inline-formula><mml:math id="M30" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> and subtract <inline-formula><mml:math id="M31" display="inline"><mml:mrow><mml:mi mathvariant="bold">M</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>
from both sides of Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>). This yields a new decomposition
derived in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/> (with substitutions
<inline-formula><mml:math id="M32" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>)
as
            <disp-formula id="Ch1.E4" content-type="numbered"><label>4</label><mml:math id="M34" display="block"><mml:mtable rowspacing="0.2ex" columnspacing="1em" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>|</mml:mo><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>|</mml:mo><mml:msubsup><mml:mo>|</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>=</mml:mo><mml:mo>|</mml:mo><mml:mo>|</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>|</mml:mo><mml:msubsup><mml:mo>|</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mfenced close="" open="("><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>T</mml:mi></mml:msup><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mfenced open="" close=")"><mml:mrow><mml:mo>-</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:mfenced><mml:mi>T</mml:mi></mml:msup><mml:mi mathvariant="bold">M</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:mfenced><mml:mi>T</mml:mi></mml:msup><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>T</mml:mi></mml:msup><mml:mi mathvariant="normal">Φ</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
          where <inline-formula><mml:math id="M35" display="inline"><mml:mi mathvariant="normal">Φ</mml:mi></mml:math></inline-formula> is the same term as in Eq. (<xref ref-type="disp-formula" rid="Ch1.E3"/>).</p>
      <p id="d1e1103">In the ideal situation, we would like to optimize the left-hand side
of Eqs. (<xref ref-type="disp-formula" rid="Ch1.E3"/>) and (<xref ref-type="disp-formula" rid="Ch1.E4"/>). However,
due to unavailability of <inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> the linear term is
typically ignored (assumed to be negligible) and the quadratic term
is approximated using a parametric form of <inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:mi mathvariant="normal">Φ</mml:mi><mml:mo>≈</mml:mo><mml:mi mathvariant="normal">Ξ</mml:mi></mml:mrow></mml:math></inline-formula>. The
optimization criterion is then
            <disp-formula id="Ch1.E5" content-type="numbered"><label>5</label><mml:math id="M38" display="block"><mml:mrow><mml:mi>J</mml:mi><mml:mo>=</mml:mo><mml:mo>|</mml:mo><mml:mo>|</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>|</mml:mo><mml:msubsup><mml:mo>|</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>T</mml:mi></mml:msup><mml:mi mathvariant="normal">Ξ</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          The estimation error caused by approximation (<xref ref-type="disp-formula" rid="Ch1.E5"/>) can
be influenced by two choices of the user: (i) first guess <inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>
and (ii) regularization matrix <inline-formula><mml:math id="M40" display="inline"><mml:mi mathvariant="normal">Ξ</mml:mi></mml:math></inline-formula>. The purpose of choosing <inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>
is minimization of the linear term in Eq. (<xref ref-type="disp-formula" rid="Ch1.E4"/>). The
choice of the parametric form of <inline-formula><mml:math id="M42" display="inline"><mml:mi mathvariant="normal">Ξ</mml:mi></mml:math></inline-formula> corresponds to choosing a model
of the SRS matrix error <inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">M</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, since <inline-formula><mml:math id="M44" display="inline"><mml:mi mathvariant="normal">Ξ</mml:mi></mml:math></inline-formula> is an approximation
of <inline-formula><mml:math id="M45" display="inline"><mml:mi mathvariant="normal">Φ</mml:mi></mml:math></inline-formula>, which is determined by <inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">M</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e1269">In the following sections, we will discuss methods that estimate
<inline-formula><mml:math id="M47" display="inline"><mml:mi mathvariant="normal">Ξ</mml:mi></mml:math></inline-formula> from the data using parameterization of <inline-formula><mml:math id="M48" display="inline"><mml:mi mathvariant="normal">Ξ</mml:mi></mml:math></inline-formula> by tri-diagonal
matrices with a limited number of parameters. Specifically, we will
investigate if the choice of <inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> has an impact on better
estimation of <inline-formula><mml:math id="M50" display="inline"><mml:mi mathvariant="normal">Ξ</mml:mi></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Optimization approach</title>
      <p id="d1e1312"><?xmltex \igopts{width=241.848425pt}?><inline-graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-g01.png"/></p>
      <p id="d1e1318">In <xref ref-type="bibr" rid="bib1.bibx15" id="text.40"/>, the source term inversion problem
is formulated as in Eq. (<xref ref-type="disp-formula" rid="Ch1.E5"/>) with choices
            <disp-formula id="Ch1.E6" content-type="numbered"><label>6</label><mml:math id="M51" display="block"><mml:mrow><mml:mi mathvariant="normal">Ξ</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="bold">B</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ϵ</mml:mi><mml:msup><mml:mi mathvariant="bold">D</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:mi mathvariant="bold">D</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where matrix <inline-formula><mml:math id="M52" display="inline"><mml:mi mathvariant="bold">B</mml:mi></mml:math></inline-formula> is the selected or estimated precision matrix,
the matrix <inline-formula><mml:math id="M53" display="inline"><mml:mi mathvariant="bold">D</mml:mi></mml:math></inline-formula> a discrete representation of the second derivative
with diagonal elements equal to <inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> and equal to <inline-formula><mml:math id="M55" display="inline"><mml:mn mathvariant="normal">1</mml:mn></mml:math></inline-formula> on the first
sub-diagonals, and the scalar <inline-formula><mml:math id="M56" display="inline"><mml:mi mathvariant="italic">ϵ</mml:mi></mml:math></inline-formula> is the parameter weighting
the smoothness of the solution <inline-formula><mml:math id="M57" display="inline"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:math></inline-formula>.</p>
      <p id="d1e1397">Minimization of Eq. (<xref ref-type="disp-formula" rid="Ch1.E5"/>) does not guarantee the non-negativity
of the estimated source term <inline-formula><mml:math id="M58" display="inline"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:math></inline-formula>. To solve this issue, an
iterative procedure is adopted <xref ref-type="bibr" rid="bib1.bibx15" id="paren.41"/> whereby
minimization of Eq. (<xref ref-type="disp-formula" rid="Ch1.E5"/>) is done repetitively with reduced
diagonal elements of <inline-formula><mml:math id="M59" display="inline"><mml:mi mathvariant="bold">B</mml:mi></mml:math></inline-formula> related to the negative parts<?pagebreak page5920?> of
the solution, thus tightening the solution to the prior source term,
which is assumed to be non-negative. The diagonal elements of <inline-formula><mml:math id="M60" display="inline"><mml:mi mathvariant="bold">B</mml:mi></mml:math></inline-formula>
related to the positive parts of the solution can, on the other hand,
be enlarged up to a selected constant. This can be iterated until
the absolute value of the sum of negative source term elements is
lower than 0.01 % of the sum of positive source term elements.
Formally, <inline-formula><mml:math id="M61" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">B</mml:mi><mml:mrow><mml:mi>j</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in the <inline-formula><mml:math id="M62" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>th iteration is calculated
as
            <disp-formula id="Ch1.E7" content-type="numbered"><label>7</label><mml:math id="M63" display="block"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">B</mml:mi><mml:mrow><mml:mi>j</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup><mml:mo>=</mml:mo><mml:mfenced open="{" close=""><mml:mtable rowspacing="0.2ex" columnspacing="1em" class="cases" columnalign="left left" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mn mathvariant="normal">0.5</mml:mn><mml:msubsup><mml:mi mathvariant="bold">B</mml:mi><mml:mrow><mml:mi>j</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mtext>for </mml:mtext><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>j</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:msubsup><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mo>min⁡</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:msqrt><mml:mn mathvariant="normal">1.5</mml:mn></mml:msqrt><mml:msubsup><mml:mi mathvariant="bold">B</mml:mi><mml:mrow><mml:mi>j</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:msubsup><mml:mo>,</mml:mo><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mtext>for </mml:mtext><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>j</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:msubsup><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:math></disp-formula>
          We observed very low sensitivity to the choice of the recommended
values of <inline-formula><mml:math id="M64" display="inline"><mml:mn mathvariant="normal">0.5</mml:mn></mml:math></inline-formula> and <inline-formula><mml:math id="M65" display="inline"><mml:msqrt><mml:mn mathvariant="normal">1.5</mml:mn></mml:msqrt></mml:math></inline-formula> in Eq. (<xref ref-type="disp-formula" rid="Ch1.E7"/>).
In most cases, varying these values does not lead to any serious differences
in the resulting estimate. However, the selection of parameters <inline-formula><mml:math id="M66" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M67" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M68" display="inline"><mml:mi mathvariant="italic">ϵ</mml:mi></mml:math></inline-formula> is crucial and will
be discussed in Sect. <xref ref-type="sec" rid="Ch1.S2.SS4"/>.</p>
      <p id="d1e1646">The method is summarized as Algorithm 1 and will be
denoted as the optimization method in this study. The maximum number of
iterations is set to 50, which was enough for convergence in all our
experiments. To solve the minimization problem (<xref ref-type="disp-formula" rid="Ch1.E5"/>),
we use the CVX toolbox <xref ref-type="bibr" rid="bib1.bibx23 bib1.bibx24" id="paren.42"/> for MATLAB.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Bayesian approach</title>
      <p id="d1e1663"><?xmltex \igopts{width=241.848425pt}?><inline-graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-g02.png"/></p>
      <p id="d1e1669">In <xref ref-type="bibr" rid="bib1.bibx56" id="text.43"/>, the problem was addressed using a Bayesian
approach. The difference from the optimization approach is twofold.
First, it has a different approximation of the covariance matrix <inline-formula><mml:math id="M69" display="inline"><mml:mi mathvariant="normal">Ξ</mml:mi></mml:math></inline-formula>:
            <disp-formula id="Ch1.E8" content-type="numbered"><label>8</label><mml:math id="M70" display="block"><mml:mrow><mml:mi mathvariant="normal">Ξ</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="bold">L</mml:mi><mml:mi mathvariant="normal">Υ</mml:mi><mml:msup><mml:mi mathvariant="bold">L</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where matrix <inline-formula><mml:math id="M71" display="inline"><mml:mi mathvariant="bold">L</mml:mi></mml:math></inline-formula> models smoothness and matrix <inline-formula><mml:math id="M72" display="inline"><mml:mi mathvariant="normal">Υ</mml:mi></mml:math></inline-formula>
models closeness to the prior source term <inline-formula><mml:math id="M73" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>. Matrix
<inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:mi mathvariant="normal">Υ</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">diag</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi mathvariant="italic">υ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">υ</mml:mi><mml:mi>n</mml:mi></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula> is a
diagonal matrix with positive entries, while matrix <inline-formula><mml:math id="M75" display="inline"><mml:mi mathvariant="bold">L</mml:mi></mml:math></inline-formula> is
a lower bi-diagonal matrix:
            <disp-formula id="Ch1.E9" content-type="numbered"><label>9</label><mml:math id="M76" display="block"><mml:mrow><mml:mi mathvariant="bold">L</mml:mi><mml:mo>=</mml:mo><mml:mfenced open="(" close=")"><mml:mtable class="array" columnalign="center center center center"><mml:mtr><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd><mml:mtd><mml:mi mathvariant="normal">⋱</mml:mi></mml:mtd><mml:mtd><mml:mi mathvariant="normal">⋱</mml:mi></mml:mtd><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd><mml:mtd><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          Second, the Bayesian approach allows us to estimate the hyper-parameters
<inline-formula><mml:math id="M77" display="inline"><mml:mi mathvariant="normal">Υ</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M78" display="inline"><mml:mi mathvariant="bold">L</mml:mi></mml:math></inline-formula> from the data.</p>
      <p id="d1e1859">Specifically, it formulates a hierarchical probabilistic model:

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M79" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E10"><mml:mtd><mml:mtext>10</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi>p</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">ω</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="script">N</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="bold">M</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>,</mml:mo><mml:msup><mml:mi mathvariant="italic">ω</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:msub><mml:mi mathvariant="bold">I</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E11"><mml:mtd><mml:mtext>11</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi>p</mml:mi><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ω</mml:mi></mml:mfenced><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="script">G</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϑ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E12"><mml:mtd><mml:mtext>12</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi>p</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>|</mml:mo><mml:mi>L</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">Υ</mml:mi></mml:mrow></mml:mfenced><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi>t</mml:mi><mml:mi mathvariant="script">N</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup><mml:mo>,</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="bold">L</mml:mi><mml:mi mathvariant="normal">Υ</mml:mi><mml:msup><mml:mi mathvariant="bold">L</mml:mi><mml:mi>T</mml:mi></mml:msup></mml:mrow></mml:mfenced><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>,</mml:mo><mml:mo>[</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mi mathvariant="normal">∞</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E13"><mml:mtd><mml:mtext>13</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi>p</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi mathvariant="italic">υ</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="script">G</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.33em"/><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E14"><mml:mtd><mml:mtext>14</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi>p</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="script">N</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:msubsup><mml:mi mathvariant="italic">ψ</mml:mi><mml:mi>j</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfenced><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.33em"/><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E15"><mml:mtd><mml:mtext>15</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi>p</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="script">G</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ζ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">η</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.33em"/><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            Here, <inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:mi mathvariant="script">N</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold">Σ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> denotes a multivariate
normal distribution with a given mean vector and covariance matrix,
<inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:mi>t</mml:mi><mml:mi mathvariant="script">N</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold">Σ</mml:mi><mml:mo>,</mml:mo><mml:mo>[</mml:mo><mml:mi>a</mml:mi><mml:mo>,</mml:mo><mml:mi>b</mml:mi><mml:mo>]</mml:mo><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> denotes a multivariate
normal distribution truncated to given support <inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mi>a</mml:mi><mml:mo>,</mml:mo><mml:mi>b</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> (for details,
see Appendix in <xref ref-type="bibr" rid="bib1.bibx56" id="altparen.44"/>), and <inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:mi mathvariant="script">G</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> denotes
a gamma distribution with given scalar parameters. Prior constants <inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
are selected similarly to <inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϑ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> as <inline-formula><mml:math id="M88" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>,
yielding a noninformative prior, and prior constants <inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ζ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M90" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">η</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
are selected as <inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> to favor a smooth solution (equivalent
to <inline-formula><mml:math id="M92" display="inline"><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> prior value <inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>); see the discussion in <xref ref-type="bibr" rid="bib1.bibx56" id="text.45"/>.
To consider the prior vector <inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> is novel in the LS-APC
model.</p>
      <p id="d1e2426">To estimate the parameters of the prior model (<xref ref-type="disp-formula" rid="Ch1.E10"/>), (<xref ref-type="disp-formula" rid="Ch1.E11"/>),
and (<xref ref-type="disp-formula" rid="Ch1.E10"/>)–(<xref ref-type="disp-formula" rid="Ch1.E15"/>), we will use two inference
methods, variational Bayes' approximation and Gibbs sampling.</p>
<sec id="Ch1.S2.SS3.SSS1">
  <label>2.3.1</label><title>Variational Bayes' solution</title>
      <p id="d1e2445">The variational Bayes' solution <xref ref-type="bibr" rid="bib1.bibx48" id="paren.46"/> seeks the posterior
in the specific form of conditional independence such as
              <disp-formula id="Ch1.E16" content-type="numbered"><label>16</label><mml:math id="M95" display="block"><mml:mtable rowspacing="0.2ex" columnspacing="1em" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mi>p</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold-italic">υ</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold">l</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="italic">ω</mml:mi><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo><mml:mo>≈</mml:mo><mml:mi>p</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo><mml:mi>p</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">υ</mml:mi><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo><mml:mi>p</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold">l</mml:mi><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mi>p</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo><mml:mi>p</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ω</mml:mi><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
            The best possible approximation minimizes Kullback–Leibler
divergence <xref ref-type="bibr" rid="bib1.bibx30" id="paren.47"/> between the<?pagebreak page5921?> estimated solution
and hypothetical true posterior. This minimization uniquely determines
the form of the posterior distribution:

                  <disp-formula specific-use="align" content-type="numbered"><mml:math id="M96" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E17"><mml:mtd><mml:mtext>17</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mover accent="true"><mml:mi>p</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi>t</mml:mi><mml:msub><mml:mi mathvariant="script">N</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="normal">Σ</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E18"><mml:mtd><mml:mtext>18</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mover accent="true"><mml:mi>p</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="italic">υ</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi mathvariant="script">G</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="italic">υ</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.33em"/><mml:mspace width="0.33em" linebreak="nobreak"/><mml:mo>∀</mml:mo><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E19"><mml:mtd><mml:mtext>19</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mover accent="true"><mml:mi>p</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>(</mml:mo><mml:msub><mml:mi>l</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi mathvariant="script">N</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="normal">Σ</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.33em"/><mml:mspace width="0.33em" linebreak="nobreak"/><mml:mo>∀</mml:mo><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E20"><mml:mtd><mml:mtext>20</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mover accent="true"><mml:mi>p</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi mathvariant="script">G</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ζ</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">η</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.33em"/><mml:mspace linebreak="nobreak" width="0.33em"/><mml:mo>∀</mml:mo><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E21"><mml:mtd><mml:mtext>21</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mover accent="true"><mml:mi>p</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ω</mml:mi><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi mathvariant="script">G</mml:mi><mml:mi mathvariant="italic">ω</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mrow><mml:mi mathvariant="italic">ϑ</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">ρ</mml:mi></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

              for which the shaping parameters <inline-formula><mml:math id="M97" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="normal">Σ</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="normal">Σ</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">ζ</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">η</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="italic">ϑ</mml:mi></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M98" display="inline"><mml:mi mathvariant="italic">ρ</mml:mi></mml:math></inline-formula>
are derived in Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>. The shaping
parameters are functions of standard moments of posterior distribution,
which are denoted here as <inline-formula><mml:math id="M99" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal" stretchy="true">^</mml:mo></mml:mover></mml:math></inline-formula> and indicate the expected
value with respect to the distribution on the variable in the argument.
The standard moments together with shaping parameters form a set of
implicit equations solved iteratively; see Algorithm 2.
Note that only convergence to a local optimum is guaranteed; hence,
a good initialization and iteration strategy are beneficial (see Algorithm 2 and the discussion in <xref ref-type="bibr" rid="bib1.bibx56" id="altparen.48"/>). The
algorithm is denoted as the LS-APC-VB algorithm.</p>
</sec>
<sec id="Ch1.S2.SS3.SSS2">
  <label>2.3.2</label><title>Gibbs sampling solution</title>
      <p id="d1e3042"><?xmltex \igopts{width=241.848425pt}?><inline-graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-g03.png"/></p>
      <p id="d1e3048">The Gibbs sampler is a Markov chain Monte Carlo method for obtaining sequences
of samples from distributions for which direct sampling is difficult
or intractable <xref ref-type="bibr" rid="bib1.bibx8" id="paren.49"/>. It is a special case
of the Metropolis–Hastings algorithm with the proposal distribution derived
directly from the model <xref ref-type="bibr" rid="bib1.bibx10" id="paren.50"/>. Given
a joint probability density <inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold-italic">υ</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold">l</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="italic">ω</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>,
a full conditional distribution needs to be derived for each variable
or a block of variables; i.e., for <inline-formula><mml:math id="M101" display="inline"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:math></inline-formula>, distribution <inline-formula><mml:math id="M102" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">υ</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold">l</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="italic">ω</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>
has to be found. These full conditionals then serve as proposal generators
and have the same form as Eqs. (<xref ref-type="disp-formula" rid="Ch1.E17"/>)–(<xref ref-type="disp-formula" rid="Ch1.E21"/>).
We use the original Gibbs sampler from <xref ref-type="bibr" rid="bib1.bibx21" id="text.51"/>.
Having samples from the last iteration, or a random initialization
for the first iteration, the algorithm sweeps through all variables
and draws samples from their respective full conditional distributions.
It can be shown that samples generated in such a manner form a Markov
chain whose stationary distribution, the distribution to which the
chain converges, is the original joint probability density. Since
the convergence of the algorithm can be very slow, it is common practice
to discard the first few obtained samples. This is known as a burn-in
period. The advantage of this algorithm is its indifference to the
initial state from which sampling starts.</p>
</sec>
</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Tuning parameters and prior source term</title>
      <p id="d1e3183">All mentioned methods are sensitive to a certain extent to the selection
of their parameters. Here, we will identify these tuning parameters
and discuss their settings in the following experiments. Moreover,
we will discuss the selection of the prior source term.</p>
      <p id="d1e3186">The optimization approach is summarized in Algorithm 1
wherein two key tuning parameters are needed: parameter <inline-formula><mml:math id="M103" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>,
which affects the closeness of a solution to the prior source term through
the matrix <inline-formula><mml:math id="M104" display="inline"><mml:mi mathvariant="bold">B</mml:mi></mml:math></inline-formula>, and parameter <inline-formula><mml:math id="M105" display="inline"><mml:mi mathvariant="italic">ϵ</mml:mi></mml:math></inline-formula>, which affects the
smoothness of a solution. In the following experiments, we select the
parameter <inline-formula><mml:math id="M106" display="inline"><mml:mi mathvariant="italic">ϵ</mml:mi></mml:math></inline-formula> by experience, while it can be seen that the
solution is similar for a relatively wide range of values (a few orders
of magnitude). The parameter <inline-formula><mml:math id="M107" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> seems to be
crucial for the optimization method and sensitivity to the choice
of this parameter will be studied, while <inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
will be referred to as the tuning parameter. Note that heuristic techniques
such as the L-curve method <xref ref-type="bibr" rid="bib1.bibx27" id="paren.52"/> cannot be used
here because of the modification of the matrix <inline-formula><mml:math id="M109" display="inline"><mml:mi mathvariant="bold">B</mml:mi></mml:math></inline-formula> within
the algorithm. This will be demonstrated in Sect. <xref ref-type="sec" rid="Ch1.S3"/>
(Fig. <xref ref-type="fig" rid="Ch1.F2"/>). The LS-APC-VB method, summarized in Algorithm 2, also needs the selection of initial <inline-formula><mml:math id="M110" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>;
however, relatively low sensitivity to this choice was reported <xref ref-type="bibr" rid="bib1.bibx56" id="paren.53"/>.
The LS-APC-G method, summarized in Algorithm 3,
is also initialized using <inline-formula><mml:math id="M111" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, while its sensitivity
to this choice is negligible due to the Gibbs sampling mechanism.</p>
      <p id="d1e3284">To select the prior source term seems to be an even more difficult
problem, especially in cases of releases with limited available information.
Therefore, we will investigate various errors in the prior source
term, which can be considered thanks to controlled experiments in which
the true source term is available. We consider the time shift
of the prior source term in contrast with the true source term, different
scales, and a blurred version of the true source term. These errors
can be examined alone or combined, which will probably be more realistic.</p>
</sec>
<sec id="Ch1.S2.SS5">
  <label>2.5</label><title>Tuning by cross-validation</title>
      <p id="d1e3295">While the tuning parameters selected in the previous section are often
selected manually, statistical methods for their<?pagebreak page5922?> selection are also
available. One of the most popular is cross-validation <xref ref-type="bibr" rid="bib1.bibx16" id="paren.54"/>,
which we will investigate in the context of source term determination.
The method is really simple: all available data are split into
training and testing datasets <inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mtext>train</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M113" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">M</mml:mi><mml:mtext>train</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mtext>test</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">M</mml:mi><mml:mtext>test</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>.
The training dataset is then used for source term estimation, while
the test dataset is used for computation of the norm of the residue
of the estimated source term, <inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mtext>test</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="bold">M</mml:mi><mml:mtext>test</mml:mtext></mml:msub><mml:mfenced close="〉" open="〈"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:mfenced><mml:mo>|</mml:mo><mml:msub><mml:mo>|</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>.
Such an estimate is known to be almost unbiased but with large variance.
Therefore, the procedure is repeated several times and the tuning
parameters are selected based on statistical evaluation of the results.
In this experiment, we repeat the random selection of 80 % of the measurements
as the training set and using the remaining 20 % as the test set.
For each tuning parameter <inline-formula><mml:math id="M117" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, this is repeated
100 times in order to reach statistical significance of the selected
tuning parameter.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Sensitivity study on the ETEX dataset</title>
      <p id="d1e3398">The European Tracer Experiment (ETEX) is one of a few large controlled
tracer experiments (see <uri>https://rem.jrc.ec.europa.eu/etex/</uri>, last access: 26 April 2020). We use
data from the first release in which a total amount of 340 kg of nearly
inert perfluoromethylcyclohexane (PMCH) was released at a constant
rate for nearly 12 h at Monterfil in Brittany, France, on 23 October
1994 <xref ref-type="bibr" rid="bib1.bibx39" id="paren.55"/>. Atmospheric concentrations of PMCH were
monitored at 168 measurement stations across Europe with a sampling
interval of 3 h and a total number of measurements of 3102. The ETEX
dataset has been used as a validation scenario for inverse modeling
(see, e.g., <xref ref-type="bibr" rid="bib1.bibx4 bib1.bibx33 bib1.bibx56" id="altparen.56"/>).
The great benefit of this dataset is that the estimated source terms
can be directly compared with the true release given in Fig. <xref ref-type="fig" rid="Ch1.F1"/>
(first row) using dashed red lines.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><label>Figure 1</label><caption><p id="d1e3414">The uppermost row of panels shows eight different
prior source terms <inline-formula><mml:math id="M118" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> (black lines) used for the ETEX
source term estimation. The true ETEX source term is repeated in every
panel (red dashed line). The middle and the lowermost rows display
the mean absolute error between estimated and true source terms for the ETEX
ERA-40 and ETEX ERA-Interim datasets, respectively.</p></caption>
        <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-f01.png"/>

      </fig>

      <p id="d1e3434">To calculate the SRS matrices, we used the Lagrangian particle dispersion
model FLEXPART <xref ref-type="bibr" rid="bib1.bibx49 bib1.bibx50" id="paren.57"/> version
8.1. We assume that the release period occurred during 120 h period;
thus, 120 forward calculations of a 1 h hypothetical unit release
were performed and SRS coefficients were calculated from simulated
concentrations corresponding to the 3102 measurements. As a result,
we obtained the SRS matrix <inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:mi mathvariant="bold">M</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mn mathvariant="normal">3102</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">120</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>.
FLEXPART is driven by meteorological input data from the European
Center for Medium-Range Weather Forecasts (ECMWF) from which different
datasets are available. We used two: (i) data from the 40-year reanalysis
(ERA-40) and (ii) data from the continuously updated ERA-Interim reanalysis.
The computed matrices for ETEX are given in Appendix <xref ref-type="sec" rid="App1.Ch1.S3"/> together with their associated singular
values to demonstrate conditioning of the problem.</p>
      <p id="d1e3463">The tested method will be compared in terms of the mean absolute error
(MAE) between the estimated and the true source term for different
tuning parameters <inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. We select two representative
values of the smoothing parameter <inline-formula><mml:math id="M121" display="inline"><mml:mi mathvariant="italic">ϵ</mml:mi></mml:math></inline-formula> for the optimization
method. Specifically, we selected <inline-formula><mml:math id="M122" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>,
while higher values lead to overly smooth and lower values to non-smooth
solutions. We tested eight different prior source terms <inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>;
see Fig. <xref ref-type="fig" rid="Ch1.F1"/>, top row, black lines. These included the following: <inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>
equal to (i) the true source term; (ii) zeros for all elements; (iii)
true source term right-shifted by five time steps; (iv) true source term
scaled by a factor of <inline-formula><mml:math id="M126" display="inline"><mml:mn mathvariant="normal">2.0</mml:mn></mml:math></inline-formula>; (v) true source term blurred using a convolution
kernel of five time steps, left-shifted by five time steps, and
scaled by a factor of <inline-formula><mml:math id="M127" display="inline"><mml:mn mathvariant="normal">1.3</mml:mn></mml:math></inline-formula>; (vi) true source term substantially right-shifted;
(vii) true source term scaled by a factor of 10; and (viii) source term
with constant activity. The resulting MAEs for all tested methods
and for all eight prior source terms are displayed in Fig. <xref ref-type="fig" rid="Ch1.F1"/>
for ETEX with the ERA-40 dataset in the second column and for ETEX with
ERA-Interim in the third row. The figures in the second and third
rows are accompanied by the MAE between the true source term and the
prior source term used, displayed with dashed red lines.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><?xmltex \currentcnt{2}?><label>Figure 2</label><caption><p id="d1e3563">L-curve-type plots using the optimization algorithm
with <inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mi>e</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> from ETEX ERA-40 with <inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> 2.0
scaled <bold>(a)</bold> and from ETEX ERA-Interim with <inline-formula><mml:math id="M130" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> shifted,
scaled, and blurred <bold>(b)</bold>. The red crosses denote “sweet spots”.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-f02.png"/>

      </fig>

<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Results</title>
      <p id="d1e3625">We observe that for all choices of the optimization method, the results
exhibit two notable modes of solution: the data mode for tuning parameters
with minimum impact on the loss function and the prior mode for tuning
parameter values that cause the prior to dominate the loss function.
This is notable for the results in the range of <inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
in Fig. <xref ref-type="fig" rid="Ch1.F1"/>. For <inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> the
data term dominates the loss function, and all methods converge to
a similar answer (note that the data mode is different for different
smoothing parameters in the optimization method).</p>
      <p id="d1e3662">For <inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>, the loss function is dominated
by the prior and all estimates converge to <inline-formula><mml:math id="M134" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>. Although
there are typically only two visibly stable modes of all the solutions (the data
and prior mode), we also observe a third mode in the optimization
solution, best seen, e.g., in Fig. <xref ref-type="fig" rid="Ch1.F1"/> in the second row
and the fourth column or in the third row and the fifth column, where
the error significantly drops. These “sweet spots” are the desired
locations that we hope to find by tuning of the hyper-parameters.
While they are obvious when we know the ground truth, the challenge
is to find them without this knowledge.</p>
      <p id="d1e3696">An attempt to find the optimal tuning via the L-curve method (i.e.,
dependence between the norm of the solution and the norm of the residuum
between measurement and reconstruction) is displayed and demonstrated
in two cases: ETEX ERA-40 with <inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> 2.0 scaled (Fig. <xref ref-type="fig" rid="Ch1.F2"/>, left) and ETEX ERA-Interim with <inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>
shifted, scaled, and blurred (Fig. <xref ref-type="fig" rid="Ch1.F2"/>, right) for
the optimization method with <inline-formula><mml:math id="M137" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>. In these cases (and
all others), L-curve shapes were not reached at all and thus an optimum
regularization parameter cannot be chosen from these plots. The red
crosses denote the value<?pagebreak page5923?> corresponding to minima of MAEs. One can
see that the sweet spots are on the transition between the data mode
and the prior mode of solutions with no specific feature in these
measures. More detailed analysis is presented in the next section.</p>
      <p id="d1e3743">The LS-APC-VB method also exhibits modes of solution; however, the
transition between the data mode and the prior source term mode seems
to be rather fast. Notably, no such transitions are observed in the
case of the LS-APC-G method. This is caused by the fact that the Gibbs
sampling is not sensitive to the selection of the initial state, as
discussed in Sect. <xref ref-type="sec" rid="Ch1.S2.SS3.SSS2"/>. With the
exception of <inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> as a constant activity (Fig. <xref ref-type="fig" rid="Ch1.F1"/>,
eighth column), the LS-APC-VB method performs better than the
optimization method when approaching the data mode of a solution.
The LS-APC-G method suffers from overestimating the source term in
time steps when the true source term is zero and not enough evidence
is available in the data. This can clearly be seen in Figs. <xref ref-type="fig" rid="Ch1.F3"/>
and  <xref ref-type="fig" rid="Ch1.F4"/> where estimates from the LS-APC-G method
are displayed using green lines; see especially the time steps between
15  and 45 h. This is closely related to the low sensitivities in
SRS matrices between the 15th and 45th columns; see Fig. <xref ref-type="fig" rid="App1.Ch1.S3.F11"/>
for an illustration.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Desired optima of the estimated source term</title>
      <p id="d1e3776">Here, we will discuss the behavior of the methods around the regions
of the tuning parameter with minimum MAE (sweet spots) observed in
the case of the optimization method. Note that no such regions are
observed in the case of the LS-APC-VB and LS-APC-G methods. The temporal
profiles of the estimated source term at different penalization coefficients
selected around two different sweet spots are displayed in Figs. <xref ref-type="fig" rid="Ch1.F3"/>
and  <xref ref-type="fig" rid="Ch1.F4"/>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><?xmltex \currentcnt{3}?><label>Figure 3</label><caption><p id="d1e3785">The uppermost panel shows mean absolute errors
between estimated and true source terms for the ETEX ERA-40 dataset with
<inline-formula><mml:math id="M139" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> 2.0 scaled for all methods. Certain settings of
the tuning parameter are highlighted and labeled with <bold>(a)</bold>, <bold>(b)</bold>, <bold>(c)</bold>,
and <bold>(d)</bold>. Estimated source terms for these tuning parameter choices
are given in the panels below. The lowermost panel displays the estimated
source terms from the LS-APC-VB and LS-APC-G algorithms for comparison.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-f03.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><?xmltex \currentcnt{4}?><label>Figure 4</label><caption><p id="d1e3819">Same as Fig. <xref ref-type="fig" rid="Ch1.F3"/> for the ETEX ERA-Interim
dataset with <inline-formula><mml:math id="M140" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> shifted, scaled, and blurred.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-f04.png"/>

        </fig>

      <?pagebreak page5924?><p id="d1e3842">Figure <xref ref-type="fig" rid="Ch1.F3"/> displays results for the ETEX ERA-40 dataset
with the prior source term selected as the 2.0 times scaled true source
term. The top graph is a copy of sensitivity to tuning in terms of
MAE from Fig. <xref ref-type="fig" rid="Ch1.F1"/> (second row, fourth column), and labels
(a), (b), (c), and (d) indicate selected values of tuning parameters
for which the resulting estimated source terms are shown in Fig. <xref ref-type="fig" rid="Ch1.F3"/>. The four estimates illustrate the
transition from the data mode of solution (a) to the prior mode of
solution (d). The data mode underestimates the true release, while
the prior mode overestimates it. As displayed in Fig. <xref ref-type="fig" rid="Ch1.F3"/>b and c, the slow transition between these two modes allows us to
approach the true source term closely, since the chosen prior term
is only a scaled version of the true release and the sweet spot lies
exactly between the two modes. Both the LS-APC-VB and the LS-APC-G
methods diverge from the “good” solution since they consider
it to be very unlikely with respect to the observed data. Since no
heuristics such as the L-curve can identify this tuning as providing
good results (see Fig. <xref ref-type="fig" rid="Ch1.F2"/>, left), we argue that choosing
the optimal setting of the tuning parameter is not possible without
knowledge of the true source term and the occurrence of the sweet
spot is only a coincidence.</p>
      <p id="d1e3855">Figure <xref ref-type="fig" rid="Ch1.F4"/> displays results for the ETEX ERA-Interim dataset
with the prior source term shifted, scaled, and blurred in the same
way as in the third row and fifth column of Fig. <xref ref-type="fig" rid="Ch1.F3"/>.
Here, the transition is not so sharp as in the previous case since
the true source term does not lie exactly on the transition between
the data mode (panel a) and the prior mode (panel d). The data
mode (a) also contains nonzero elements, mainly in the first half
of the source term. The transition can be seen in Fig. <xref ref-type="fig" rid="Ch1.F4"/>b and c where the nonzero activity at the beginning of the data
mode is eliminated by using prior source term information, while the
nonzero elements are relatively close to the true release (b). In
(c), the zero activity in the first half remains due to the prior
source term; however, the estimated activity within the true release
period moves toward the assumed prior source term. In (d), the estimation
is already very close to the chosen prior source term. Once again,
the improvement appears to be coincidental rather than systematic.</p>
      <?pagebreak page5925?><p id="d1e3864">We note that the two discussed sweet spots are selected as representative
cases and other observed sweet spots (see, e.g., Fig. <xref ref-type="sec" rid="Ch1.S3"/>,
the second or eighth column) are very similar in nature. By analyzing
the sweet spots, we conclude that they represent a transition from
the data mode to the prior mode of solution. In some cases, the transition
is very close to the true release (see, e.g., Fig. <xref ref-type="fig" rid="Ch1.F3"/>),
while in some cases, no point on the transition path approaches the
true solution (see, e.g., Fig. <xref ref-type="fig" rid="Ch1.F4"/>), and the data or prior
mode is the closest.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><?xmltex \currentcnt{5}?><label>Figure 5</label><caption><p id="d1e3875">The top left panel <bold>(a)</bold> shows the sensitivity of
MAE to the tuning parameter for the ETEX ERA-40 dataset with <inline-formula><mml:math id="M141" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>
2.0 scaled. This is a repetition from Fig. <xref ref-type="fig" rid="Ch1.F1"/>. The chosen
optimal setting based on CV is shown with a thick red vertical line.
The top right panel <bold>(b)</bold> shows the error residuals of the CV experiments
as a function of the tuning parameter. Residuals are shown as box-and-whisker
plots, where the boxes extend between the 25th and 75th percentiles (whiskers
between 2.7 sigmas) and medians are marked with red lines, while mean
values are displayed using a solid magenta line. The lowermost panel <bold>(c)</bold>
shows the source term obtained with the tuning parameter setting chosen
via CV.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-f05.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Tuning by cross-validation</title>
      <p id="d1e3914">Since the LS-APC-VB and LS-APC-G methods provide rather stable
estimates of the source term, we will investigate the use of cross-validation
(CV) in optimization-based approaches.  The results of CV for
the optimization method with <inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for selected combinations are displayed in Figs. <xref ref-type="fig" rid="Ch1.F5"/>, <xref ref-type="fig" rid="Ch1.F6"/>, and <xref ref-type="fig" rid="Ch1.F7"/> in the top right panels:
(i) ERA-40 with <inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> 2.0 scaled; (ii) ERA-Interim with
<inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> shifted, blurred, and scaled; and (iii) ERA-40 with
<inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> equal to the true source term. The results are displayed using
box plots where medians are displayed using red lines inside boxes,
while the boxes cover the 25th and 75th quantiles. The mean values
of the residuals for each tuning parameter are displayed using magenta
lines. The value of the tuning parameter that minimizes the CV error
is also visualized in the top left panels using solid vertical red
lines inside the graphs of MAE sensitivity from Fig. <xref ref-type="fig" rid="Ch1.F1"/>.
Bottom panels of figures display the estimated source terms using
the tested methods for the tuning parameter selected by cross-validation
together with the true source term (dashed red line) and the
prior source term used (full black line).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><?xmltex \currentcnt{6}?><label>Figure 6</label><caption><p id="d1e3979">Same as Fig. <xref ref-type="fig" rid="Ch1.F5"/> for the ETEX
ERA-Interim dataset with <inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> shifted, scaled, and blurred.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-f06.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><?xmltex \currentcnt{7}?><label>Figure 7</label><caption><p id="d1e4003">Same as Fig. <xref ref-type="fig" rid="Ch1.F5"/> for the ETEX
ERA-40 dataset with <inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> equal to the true source term.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-f07.png"/>

        </fig>

      <p id="d1e4026">The results demonstrate significant differences between the prior
mode and the data mode of the solution, which can be seen in all cross-validation
box plots. This is also the case for <inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>, which is not displayed
here. Notably, the minima of cross-validation are not reached in the positions
of the sweet spots, indicating that the observed MAE minima are coincidental.
In all tested cases, the minima of cross-validation are reached closer
to the data mode than to the prior mode. This is demonstrated
for the extreme case of <inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> equal to the true source
term in Fig. <xref ref-type="fig" rid="Ch1.F7"/>. Even for this case, the minimum
of<?pagebreak page5926?> cross-validation is associated with the data mode rather than the
prior mode.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8"><?xmltex \currentcnt{8}?><label>Figure 8</label><caption><p id="d1e4055">Box-and-whisker plots of the MAE averaged
over all explored prior source terms, with the tuning parameter settings
determined by CV for the optimization method (left) and the LS-APC-VB
method (middle), as well as for the LS-APC-VB method using a default <inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
setting of <inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">0</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-f08.png"/>

        </fig>

      <p id="d1e4086">To evaluate the overall results, we compute the mean MAE over all
estimated source terms using the optimization method with <inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>
and the tuning parameter <inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> selected using
cross-validation (CV) for each prior source term <inline-formula><mml:math id="M154" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>.
This result is given in Fig. <xref ref-type="fig" rid="Ch1.F8"/> using a box-and-whisker
plot. The same box-and-whisker plots are also computed for the LS-APC-VB
method with the same scheme of selection of tuning parameters <inline-formula><mml:math id="M155" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
using the cross-validation method (denoted CV in Fig. <xref ref-type="fig" rid="Ch1.F8"/>)
and for the LS-APC-VB algorithm with the tuning parameter <inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
set to <inline-formula><mml:math id="M157" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">0</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> as recommended in <xref ref-type="bibr" rid="bib1.bibx56" id="text.58"/> (denoted
default in Fig. <xref ref-type="fig" rid="Ch1.F8"/>). These results suggest
that the LS-APC-VB method with fixed start (but weighted to data using
selection of <inline-formula><mml:math id="M158" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">ω</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) slightly outperforms other methods in
terms of the mean MAE for ETEX data with various assumed prior source
terms without the necessity of exhaustive tuning.</p>
</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Sensitivity study on the Chernobyl dataset</title>
      <p id="d1e4198">We demonstrate the sensitivity of the tuning methods to estimation
of the source term for the Chernobyl accident, which became, together
with the Fukushima accident, a widely discussed case in the inverse modeling
literature. Specifically, we study caesium-134 (Cs-134) and caesium-137
(Cs-137) releases from the Chernobyl nuclear power plant (ChNPP).
For this purpose, we use a recently published dataset <xref ref-type="bibr" rid="bib1.bibx17" id="paren.59"/>
consisting of 4891 observations of Cs-134 and 12 281 observations of
Cs-137. We use the same experimental setup as in <xref ref-type="bibr" rid="bib1.bibx18" id="text.60"/>,
which will now briefly be described.</p>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Atmospheric modeling</title>
      <p id="d1e4214">The Lagrangian particle dispersion model FLEXPART version 10.3 <xref ref-type="bibr" rid="bib1.bibx49 bib1.bibx50 bib1.bibx41" id="paren.61"/>
was used to simulate the transport of radiocesium and to calculate
the SRS matrices. FLEXPART was driven by two meteorological reanalyses
so that these can be compared. First, ERA-Interim <xref ref-type="bibr" rid="bib1.bibx14" id="paren.62"/>,
a European Center for Medium-Range Weather Forecast (ECMWF) reanalysis,
was used with a temporal resolution of 3 h and spatial resolution
of circa 80 km on 60 vertical levels from the surface up to 0.1 hPa.
Second, the ERA-40 <xref ref-type="bibr" rid="bib1.bibx59" id="paren.63"/> ECMWF reanalysis was used
at a 125 km spatial resolution. The emissions from the ChNPP are discretized
into six 0.5 km high vertical layers from 0 to 3 km. The assumed temporal
resolution is 3 h from 00:00 UTC on 26 April  to 21:00 UTC on 5 May
1986, for which the forward runs of FLEXPART are done. This period
is selected according to the consensus that the activity declined
by approximately 6 orders of magnitude after 5 May <xref ref-type="bibr" rid="bib1.bibx13" id="paren.64"/>.
This discretized the temporal–spatial domain to 480 assumed
releases (80 temporal elements times 6 vertical layers) for each nuclide.
For each spatiotemporal element, concentration and deposition sensitivities
are computed using 300 000 particles. Following <xref ref-type="bibr" rid="bib1.bibx18" id="text.65"/>,
the aerosol tracers Cs-134 and Cs-137 are subject to wet <xref ref-type="bibr" rid="bib1.bibx25" id="paren.66"/>
and dry <xref ref-type="bibr" rid="bib1.bibx50" id="paren.67"/> deposition depending on different
particle sizes with aerodynamic mean diameters of 0.4, 1.2, 1.8, and
5.0 <inline-formula><mml:math id="M159" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>. The distribution of mass is assumed as 15 %, 30 %, 40 %,
and 15 % for 0.4, 1.2, 1.8, and 5.0 <inline-formula><mml:math id="M160" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> particle sizes, respectively,
following measurements of <xref ref-type="bibr" rid="bib1.bibx32" id="text.68"/> and computation
results of <xref ref-type="bibr" rid="bib1.bibx57" id="text.69"/>.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Prior source term and measurement uncertainties</title>
      <p id="d1e4273">The exact temporal profile of the Chernobyl release is uncertain, although
certain features are commonly accepted <xref ref-type="bibr" rid="bib1.bibx13" id="paren.70"/>.
The first 3 d correspond to higher release with an initial explosion
and release of part of the fuel. The next 4 d correspond to
lower releases, and the last 3 d correspond to higher releases
again due to fires and core meltdown. After these 10 d, the released
activity dropped by several orders of magnitude <xref ref-type="bibr" rid="bib1.bibx13" id="paren.71"/>.</p>
      <p id="d1e4282">We follow the setup of <xref ref-type="bibr" rid="bib1.bibx18" id="text.72"/> and consider
six previously estimated Chernobyl source terms of Cs-134 and Cs-137
for which the criteria of consideration were their sufficient temporal
resolution and emission height information. The source terms are taken
from <xref ref-type="bibr" rid="bib1.bibx6" id="text.73"/> (two cases with the same amount
of release but slightly different release heights), <xref ref-type="bibr" rid="bib1.bibx40" id="text.74"/>,
<xref ref-type="bibr" rid="bib1.bibx29" id="text.75"/>, <xref ref-type="bibr" rid="bib1.bibx1" id="text.76"/>, and
<xref ref-type="bibr" rid="bib1.bibx54" id="text.77"/>. See <xref ref-type="bibr" rid="bib1.bibx18" id="text.78"/>
for detailed descriptions and profiles. The prior source term
in our experiment is computed as their average emissions at a given
time and height. In sum, the total prior releases of Cs-134 and Cs-137
are 54  and 74 PBq, respectively.</p>
      <p id="d1e4307">The uncertainties associated with measurements are relatively high
since both concentration and deposition measurements are used from
the dataset <xref ref-type="bibr" rid="bib1.bibx17" id="paren.79"/>. As was pointed
out by <xref ref-type="bibr" rid="bib1.bibx26" id="text.80"/> and <xref ref-type="bibr" rid="bib1.bibx61" id="text.81"/>, deposition
measurements may be biased by<?pagebreak page5927?> an unknown mass of radiocesium already
deposited over Europe from, e.g., nuclear weapons tests. This mass has, however,
been reported <xref ref-type="bibr" rid="bib1.bibx13" id="paren.82"/> and already
subtracted from the dataset. Still, similarly to <xref ref-type="bibr" rid="bib1.bibx18" id="text.83"/>,
we consider relative measurement errors of 30 % for concentration
measurements and 60 % for deposition measurements, while the absolute
measurement errors are handled in the same way as in <xref ref-type="bibr" rid="bib1.bibx53" id="text.84"/>.
Here, the measurement vector and SRS matrix are preconditioned (scaled)
using the matrix <inline-formula><mml:math id="M161" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>, which is a diagonal matrix with <inline-formula><mml:math id="M162" display="inline"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">σ</mml:mi><mml:mtext>abs</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">σ</mml:mi><mml:mtext>rel</mml:mtext></mml:msub><mml:mo>∘</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>
on its diagonal, where <inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">σ</mml:mi><mml:mtext>abs</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is assumed
absolute error, <inline-formula><mml:math id="M164" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">σ</mml:mi><mml:mtext>rel</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is assumed relative
error, and <inline-formula><mml:math id="M165" display="inline"><mml:mo>∘</mml:mo></mml:math></inline-formula> denotes the Hadamard product (element-wise multiplication).
The scaling is then <inline-formula><mml:math id="M166" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mtext>scaled</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="bold">R</mml:mi><mml:mi mathvariant="bold-italic">y</mml:mi></mml:mrow></mml:math></inline-formula>
and <inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">M</mml:mi><mml:mtext>scaled</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="bold">RM</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Results</title>
      <p id="d1e4447">In this case, direct comparison of the estimates with the true emission
profile is not possible since this remains unknown. Therefore, we
will provide results of the tested methods as the sensitivity of the total
estimated release activity to tuning parameters in the same way as
in Sect. <xref ref-type="sec" rid="Ch1.S3"/>. Note that the total
release activity is a sum of releases from all six vertical layers
and all four aerosol size fractions. Due to this composition of the
problem, the selection of the smoothness parameter <inline-formula><mml:math id="M168" display="inline"><mml:mi mathvariant="italic">ϵ</mml:mi></mml:math></inline-formula> in
the case of the optimization approach is relatively difficult since
specific selection may fit better for one vertical layer than for
another. We will provide results for two settings of this parameter,
<inline-formula><mml:math id="M169" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M170" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, leading to two different
behaviors of the optimization method.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><?xmltex \currentcnt{9}?><label>Figure 9</label><caption><p id="d1e4497">Estimated total released activities for both
meteorological reanalyses (ERA-40 and ERA-Interim) and both nuclides
(Cs-134 and Cs-137) using all tested methods; see the label bar on the right
for a line description.</p></caption>
          <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-f09.png"/>

        </fig>

      <p id="d1e4506">The resulting estimates of the total released activity are displayed
in Fig. <xref ref-type="fig" rid="Ch1.F9"/> where the total of the prior source
term used <inline-formula><mml:math id="M171" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> is displayed with a dashed red line (same for
all tested settings of the tuning parameter <inline-formula><mml:math id="M172" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>).
The estimated total release activity with the use of the prior source
term <inline-formula><mml:math id="M173" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> is displayed using full lines with colors given
in the legend in Fig. <xref ref-type="fig" rid="Ch1.F9"/>, while estimations without
the use of this prior source term, i.e., with <inline-formula><mml:math id="M174" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="bold">0</mml:mn></mml:mrow></mml:math></inline-formula>,
are given using dashed lines and respective colors.</p>
      <p id="d1e4563">Similarly to the ETEX results, the results in Fig. <xref ref-type="fig" rid="Ch1.F9"/>
suggest the occurrence of two main modes of solution, the data mode
and the prior mode, with a smooth transition between them in the case
of the LS-APC-VB and optimization methods. The LS-APC-G method (evaluated
only at four points denoted by green squares due to high computational
costs) has, again, low sensitivity to the initialization of the tuning
parameter. However, the results of the LS-APC-G method are close to
the data mode of the remaining method, or higher than those. Contrary
to the previous results, the LS-APC-VB algorithm does not provide
a stable solution and suffers from the need to select the tuning parameter.
This signifies that the problem is ill-conditioned even with the proposed
regularization term; thus, VB converges to various local minima.
The optimization method with both settings of the smoothness parameter
also has two modes of solution. In the prior mode of solution (higher
values of the tuning parameter), both settings approach the same total
release activity for both nonzero (full lines) and zero (dashed lines)
prior source terms. The prior mode is dominated by the prior
source term used for an arbitrary smoothness parameter <inline-formula><mml:math id="M175" display="inline"><mml:mi mathvariant="italic">ϵ</mml:mi></mml:math></inline-formula>. The
difference can be seen in the data mode whereby about one-third higher
total released activity was estimated for smoothness parameter <inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>
than for smoothness parameter <inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> on the same level
of tuning parameter <inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. This is caused by
the penalization of high peaks of activity in the case of <inline-formula><mml:math id="M179" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>.
Thus, in the data mode of solution, the smoothness parameter is much
more important than the prior source term used, which plays almost
no role here.</p>
      <p id="d1e4641">Notice that the estimated mass is higher in the data mode than in
the prior mode. This means that the model constrained by the measurement
data alone would support a higher total release amount than the a
priori source term. The true source term is not known; however, it
is likely that the data mode overestimates the true total release.
This can happen when the SRS matrix is biased. For instance,
removal of radiocesium that is too rapid would lead to estimated air concentrations
with the correct source term that are too low, and the inversion would compensate for the
bias by increasing the posterior source term (notice, though, that
deposition values would in this case be overestimated at least close
to the source, leading to the contrary effect for the deposition data).
Regardless, this effect shows that in the data mode, the resulting
source term is heavily influenced by possible biases in the transport
model.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10" specific-use="star"><?xmltex \currentcnt{10}?><label>Figure 10</label><caption><p id="d1e4646">Cross-validation for Chernobyl Cs-134 (top
panels) and Cs-137 (bottom panels) source terms using FLEXPART driven
with ERA-40 meteorological reanalyses. Optima in the sense of cross-validation
are denoted using red circles with total estimated releases reported
in the legends.</p></caption>
          <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-f10.png"/>

        </fig>

</sec>
<sec id="Ch1.S4.SS4">
  <label>4.4</label><title>Tuning by cross-validation</title>
      <p id="d1e4664">The same cross-validation scheme as in the case of ETEX
(Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/>) was used here for the Chernobyl datasets.
The train–test split was once again 80 %–20 %, and the CV was performed
50 times for each tuning parameter <inline-formula><mml:math id="M180" display="inline"><mml:mrow><mml:msub><mml:mtext>err</mml:mtext><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The
cross-validation errors are displayed in Fig. <xref ref-type="fig" rid="Ch1.F10"/>
using box plots and associated mean values of the residue errors <inline-formula><mml:math id="M181" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mtext>test</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="bold">M</mml:mi><mml:mtext>test</mml:mtext></mml:msub><mml:mfenced close="〉" open="〈"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:mfenced><mml:mo>|</mml:mo><mml:msub><mml:mo>|</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>.
Here, the results are given for the datasets of Cs-134 (top row) and
Cs-137 (bottom row) with FLEXPART driven with ERA-40 meteorological
fields. We will investigate CV for the tuning of parameters for the optimization
and the LS-APC-VB method. The results are presented for two
<inline-formula><mml:math id="M182" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> configurations in Fig. <xref ref-type="fig" rid="Ch1.F10"/>: LS-APC-VB with <inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>, LS-APC-VB with <inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="bold">0</mml:mn></mml:mrow></mml:math></inline-formula>,
the optimization method with <inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> and with smoothness
parameter <inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, and the optimization method with <inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="bold">0</mml:mn></mml:mrow></mml:math></inline-formula>
and with smoothness parameter <inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>. For these, box plots
are displayed together with mean residuals using the same types of
lines as in Fig. <xref ref-type="fig" rid="Ch1.F9"/>. Moreover, minimal mean residuals
are identified and denoted using red circles in Fig. <xref ref-type="fig" rid="Ch1.F10"/>
for each graph, and their associated total activities are displayed
in the legend of each graph.</p>
      <p id="d1e4821">In the case of Cs-134 (top row), the cross-validation was able to
determine optimal values of tuning parameters in the case of all tested
methods. The total estimated releases<?pagebreak page5928?> associated with these tuning
parameters are 87.1 PBq (LS-APC-VB with <inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>), 56 PBq
(LS-APC-VB with <inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="bold">0</mml:mn></mml:mrow></mml:math></inline-formula>), 69.7 PBq (the optimization
method with <inline-formula><mml:math id="M191" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>), and 43 PBq (the optimization method
with <inline-formula><mml:math id="M192" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="bold">0</mml:mn></mml:mrow></mml:math></inline-formula>), which are in accordance with
the mean of previously reported total activity of 54 PBq used as a prior.
Note that the prior-dominated modes have lower residuals than the
data-dominated modes in all cases. This suggests that the prior
source term used and applied to the FLEXPART/ERA-40 simulation matches
the measurements well. On the other hand, this is not the case for
Cs-137 for which the prior-dominated modes have, with the exception of
LS-APC-VB with <inline-formula><mml:math id="M193" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="bold">0</mml:mn></mml:mrow></mml:math></inline-formula>, significantly higher
residuals than the data-dominated modes. This may be caused by two
factors. First, the prior source term is less adequate for interpretation
of measurements of Cs-137 than those of Cs-134. Second, all methods
assume a quadratic loss function, which may be less appropriate for this
dataset and could cause overestimation of the source term with the tuning
parameter selected using cross-validation in comparison with the previously
reported 74 PBq used as a prior. We note that similar results were
also observed with the ERA-Interim dataset.</p>
      <p id="d1e4891">The results suggest that a well-selected prior source term can bind
the solution to acceptable values and prevent the occurrence of extreme
outliers. On the other hand, we observed that the regularization terms
commonly used to compensate for errors of the SRS matrices are not able
to compensate for the error caused by inaccurate SRS matrices. Further
research is clearly needed to develop a more relevant method of regularization.</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Conclusions</title>
      <p id="d1e4903">Methods for the determination of the source term of an atmospheric release
have to cope with inaccurate prediction<?pagebreak page5929?> models often represented by
the source–receptor sensitivity (SRS) matrix. Relying solely on the
SRS matrix using a best estimate of weather and dispersion parameters
may lead to highly inaccurate results. We have shown that various
regularization terms introduced by different inversion methods are
essentially coarse approximations of the error of the SRS matrix, and
thus we can evaluate their suitability using methods of statistical
model validation. We have performed sensitivity tests of inverse modeling
methods to the selection of the prior source term (first guess) and
other tuning parameters for two selected inversion methods: the optimization
method <xref ref-type="bibr" rid="bib1.bibx15" id="paren.85"/> and the LS-APC method <xref ref-type="bibr" rid="bib1.bibx56" id="paren.86"/>.
These were preformed on datasets from the ETEX controlled release and the Chernobyl releases
of caesium-134 and caesium-137.</p>
      <p id="d1e4912">We have observed that the results have two strong modes of solution:
the data mode for minimal influence of the prior on the loss and the
prior mode for the loss function with significant influence of the prior.
The prior mode is naturally significantly influenced by the choice
of the prior source term. However, the dominant impact on the resulting
estimate has the choice of the regularization. In the case of the
ETEX dataset, good estimates were obtained for every choice of the
prior source term; however, the regularization has to be carefully
tuned. For some choices of the prior source term, the error of the
estimated source term was exceptionally low for good selection of
the tuning parameters. After analyzing these minima, we conjecture
that they are caused by coincidence. These minima are visible only
in comparison with the ground truth; they have no visible impact on
the common validation metrics such as the L-curve or cross-validation
and thus cannot be objectively identified.</p>
      <p id="d1e4915">We have tested the suitability of the cross-validation approach for selection
of the tuning parameters for both methods. In the case of the
ETEX release, we have observed that this approach tends to select
modes closer to the data mode than the prior mode of solution. However,
this is not the case of the Chernobyl Cs-134 release for which cross-validation
selects solutions close to the prior-dominated mode. This may be caused
by the fact that the prior source term used here fits the measurements well,
and only small corrections by the inversion are needed.
<?xmltex \hack{\newpage}?>
An interesting question is whether it is beneficial to use a nonzero
prior source term at all. Considering ETEX, for which the
true release is known, one can see that the estimates in data modes
are often even better than the considered prior source terms. On the
other hand, when the prior source term used is close to the true release,
which is probably the case for the Chernobyl Cs-134 release, its use
seems beneficial. Also, the prior source term could be valuable in
cases when the release is not fully seen by the measurement network
and thus the measurements do not provide a good constraint for the
source term estimation. However, determining the reliability of the
prior source term is difficult and even impossible in real-world scenarios,
and the prior source term would probably be shifted, scaled, and/or
blurred. We recommend tackling this task using the cross-validation approach,
providing a reasonable although computationally expensive tool for
determination at least between a prior-dominated mode or a data-dominated
mode of solution. A more sophisticated approach is to design a different
regularization of the error term <inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">M</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> exploiting, e.g., sensitivities
to local changes in concentrations around the measuring sites. The
information about sensitivity is already available from an atmospheric
transport model but it is not fully exploited with current source
term determination methods.</p><?xmltex \hack{\clearpage}?>
</sec>

      
      </body>
    <back><app-group>

<?pagebreak page5930?><app id="App1.Ch1.S1">
  <?xmltex \currentcnt{A}?><label>Appendix A</label><title>Derivation of residuum between measurement and reconstruction</title>
      <p id="d1e4943">From Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>), <inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>=</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mi mathvariant="bold">M</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mi mathvariant="bold-italic">x</mml:mi></mml:mrow></mml:math></inline-formula>
can be rewritten using the subtraction of <inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:mi mathvariant="bold">M</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M197" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> from both sides, yielding
          <disp-formula id="App1.Ch1.S1.E22" content-type="numbered"><label>A1</label><mml:math id="M198" display="block"><mml:mrow><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup><mml:mo>=</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mrow><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        which can be read as
          <disp-formula id="App1.Ch1.S1.E23" content-type="numbered"><label>A2</label><mml:math id="M199" display="block"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></disp-formula>
        for commonly used substitutions <inline-formula><mml:math id="M200" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>
and <inline-formula><mml:math id="M201" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>. This means
that the minimization of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E23"/>) is equivalent to
the minimization of the former Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>). Thus,

              <disp-formula specific-use="align"><mml:math id="M202" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:munder><mml:mo movablelimits="false">min⁡</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi></mml:munder><mml:mo>|</mml:mo><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>|</mml:mo><mml:msubsup><mml:mo>|</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>⟺</mml:mo><mml:munder><mml:mo movablelimits="false">min⁡</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi></mml:munder><mml:mo>|</mml:mo><mml:mo>|</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>-</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup><mml:mo>|</mml:mo><mml:msubsup><mml:mo>|</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>=</mml:mo><mml:munder><mml:mo movablelimits="false">min⁡</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi></mml:munder><mml:mfenced open="(" close=""><mml:mrow><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>T</mml:mi></mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>T</mml:mi></mml:msup><mml:mi mathvariant="bold">M</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>T</mml:mi></mml:msup><mml:msup><mml:mi mathvariant="bold">M</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:mi mathvariant="bold">M</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mrow><mml:mo>|</mml:mo><mml:mo>|</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mi mathvariant="bold">M</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>|</mml:mo><mml:msubsup><mml:mo>|</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:munder></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mfenced close="" open=""><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mfenced open="(" close=")"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>T</mml:mi></mml:msup><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:mfenced><mml:mi>T</mml:mi></mml:msup><mml:mi mathvariant="bold">M</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:mfenced><mml:mi>T</mml:mi></mml:msup><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mrow><mml:mtext>linear in </mml:mtext><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:munder></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mspace width="1em" linebreak="nobreak"/><mml:mfenced close=")" open=""><mml:mrow><mml:mo>+</mml:mo><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>T</mml:mi></mml:msup><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mfenced close=")" open="("><mml:mrow><mml:msup><mml:mi mathvariant="bold">M</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi><mml:mi>T</mml:mi></mml:msubsup><mml:mi mathvariant="bold">M</mml:mi><mml:mo>+</mml:mo><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi><mml:mi>T</mml:mi></mml:msubsup><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="bold">M</mml:mi></mml:msub></mml:mrow></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mi mathvariant="normal">Φ</mml:mi></mml:munder><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          where terms independent of <inline-formula><mml:math id="M203" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> are omitted.
<?xmltex \hack{\newpage}?></p>
</app>

<app id="App1.Ch1.S2">
  <?xmltex \currentcnt{B}?><label>Appendix B</label><title>Shaping parameters of LS-APC-VB posteriors</title>
      <p id="d1e5557"><disp-formula specific-use="align" content-type="numbered"><mml:math id="M204" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="App1.Ch1.S2.E24"><mml:mtd><mml:mtext>B1</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="normal">Σ</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mfenced close="〉" open="〈"><mml:mi mathvariant="italic">ω</mml:mi></mml:mfenced><mml:msup><mml:mi>M</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:mi>M</mml:mi><mml:mo>+</mml:mo><mml:mfenced close="〉" open="〈"><mml:mrow><mml:mi>L</mml:mi><mml:mi mathvariant="normal">Υ</mml:mi><mml:msup><mml:mi>L</mml:mi><mml:mi>T</mml:mi></mml:msup></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S2.E25"><mml:mtd><mml:mtext>B2</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi mathvariant="normal">Σ</mml:mi><mml:mi mathvariant="bold-italic">x</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:mfenced open="〈" close="〉"><mml:mi mathvariant="italic">ω</mml:mi></mml:mfenced><mml:msup><mml:mi>M</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>+</mml:mo><mml:mfenced open="〈" close="〉"><mml:mrow><mml:mi>L</mml:mi><mml:mi mathvariant="normal">Υ</mml:mi><mml:msup><mml:mi>L</mml:mi><mml:mi>T</mml:mi></mml:msup></mml:mrow></mml:mfenced><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S2.E26"><mml:mtd><mml:mtext>B3</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:msub><mml:mn mathvariant="bold">1</mml:mn><mml:mrow><mml:mi>n</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S2.E27"><mml:mtd><mml:mtext>B4</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="italic">β</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mi mathvariant="normal">diag</mml:mi><mml:mfenced open="(" close=")"><mml:mfenced open="〈" close="〉"><mml:mrow><mml:msup><mml:mi>L</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:mi>L</mml:mi></mml:mrow></mml:mfenced></mml:mfenced></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S2.E28"><mml:mtd><mml:mtext>B5</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><?xmltex \hack{\hbox\bgroup\fontsize{9.5}{9.5}\selectfont$\displaystyle}?><mml:mo>-</mml:mo><mml:mi mathvariant="normal">diag</mml:mi><mml:mfenced close=")" open="("><mml:mfenced open="〈" close="〉"><mml:mrow><mml:msup><mml:mi>L</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>a</mml:mi></mml:msup><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:mi>L</mml:mi></mml:mrow></mml:mfenced></mml:mfenced><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn 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open="〈"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>l</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>l</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S2.E34"><mml:mtd><mml:mtext>B11</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="italic">ϑ</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="italic">ϑ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>p</mml:mi><mml:mn 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mathvariant="bold-italic">x</mml:mi><mml:mi>T</mml:mi></mml:msup></mml:mrow></mml:mfenced><mml:msup><mml:mi>M</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:mi>M</mml:mi></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:mi>M</mml:mi><mml:mfenced open="〈" close="〉"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="App1.Ch1.S2.E35"><mml:mtd><mml:mtext>B12</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mi>T</mml:mi></mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p><?xmltex \hack{\clearpage}?>
</app>

<?pagebreak page5931?><app id="App1.Ch1.S3">
  <?xmltex \currentcnt{C}?><label>Appendix C</label><title>SRS matrices used for the ETEX and Chernobyl experiments</title>
      <p id="d1e6258">SRS matrices for ETEX are displayed in Fig. <xref ref-type="fig" rid="App1.Ch1.S3.F11"/>
for illustration. The SRS matrix computed using ERA-40 reanalyses
is in the left column, while the SRS matrix computed using ERA-Interim
is in the right column. The matrices are associated with their singular
values displayed in the bottom row. These illustrate properties of
the matrices and, importantly, their ill conditionality.</p>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S3.F11"><?xmltex \currentcnt{C1}?><label>Figure C1</label><caption><p id="d1e6265">ETEX SRS matrices computed using FLEXPART driven
by meteorological input data from the European Center for Medium-Range
Weather Forecasts (ECMWF). <bold>(a, c)</bold> Data from the 40-year reanalysis
(ERA-40) and <bold>(b, d)</bold> data from the continuously updated ERA-Interim reanalysis.
The matrices are associated with their singular values (bottom row).</p></caption>
        <?xmltex \hack{\hsize\textwidth}?>
        <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5917/2020/gmd-13-5917-2020-f11.png"/>

      </fig>

<?xmltex \hack{\clearpage}?>
</app>
  </app-group><notes notes-type="codedataavailability"><title>Code and data availability</title>

      <p id="d1e6288">All data used for the present publication can be freely downloaded from <uri>https://rem.jrc.ec.europa.eu/etex/</uri> (last access: 26 April 2020, <xref ref-type="bibr" rid="bib1.bibx39" id="altparen.87"/>) and from the Supplement of <xref ref-type="bibr" rid="bib1.bibx17" id="text.88"/>. The FLEXPART model versions 8.1 and 10.3 are open-source and freely available from their developers at <uri>https://www.flexpart.eu/</uri> (last access: 26 April 2020, <xref ref-type="bibr" rid="bib1.bibx41" id="altparen.89"/>). Reference MATLAB implementations of algorithms can be downloaded from <uri>http://www.utia.cas.cz/linear_inversion_methods/</uri> (last access: 26 April 2020, <xref ref-type="bibr" rid="bib1.bibx56" id="altparen.90"/>).</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e6316">OT designed and performed the experiments and wrote the paper. LU performed Gibbs sampling experiments and wrote parts of the paper. VŠ designed and supervised the study and wrote parts of the paper. NE prepared the Chernobyl dataset and commented on the paper. AS commented on the paper and wrote parts of the final version.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e6322">The authors declare that they have no conflict of interest.</p>
  </notes><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e6328">This research has been supported by the Czech Science Foundation (grant no. GA20-27939S).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e6334">This paper was edited by Slimane Bekki and reviewed by two anonymous referees.</p>
  </notes><ref-list>
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    <!--<article-title-html>On the tuning of atmospheric inverse methods: comparisons with the European Tracer Experiment (ETEX) and Chernobyl datasets using the atmospheric  transport model FLEXPART</article-title-html>
<abstract-html><p>Estimation of the temporal profile of an atmospheric release, also
called the source term, is an important problem in environmental sciences.
The problem can be formalized as a linear inverse problem wherein the
unknown source term is optimized to minimize the difference between
the measurements and the corresponding model predictions. The problem
is typically ill-posed due to low sensor coverage of a release and
due to uncertainties, e.g., in measurements or atmospheric transport
modeling; hence, all state-of-the-art methods are based on some form
of regularization of the problem using additional information. We
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of the source term. While the first guess is based on information
independent of the measurements, such as the physics of the potential
release or previous estimations, the regularization parameters are
often selected by the designers of the optimization procedure. In
this paper, we provide a sensitivity study of two inverse methodologies
on the choice of the prior source term and regularization parameters
of the methods. The sensitivity is studied in two cases: data from
the European Tracer Experiment (ETEX) using FLEXPART v8.1 and the
caesium-134 and caesium-137 dataset from the Chernobyl accident using
FLEXPART v10.3.</p></abstract-html>
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