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  <front>
    <journal-meta><journal-id journal-id-type="publisher">GMD</journal-id><journal-title-group>
    <journal-title>Geoscientific Model Development</journal-title>
    <abbrev-journal-title abbrev-type="publisher">GMD</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Geosci. Model Dev.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1991-9603</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/gmd-13-5663-2020</article-id><title-group><article-title>Sensitivity of spatial aerosol particle distributions to the boundary conditions in the PALM model system 6.0</article-title><alt-title>Sensitivity to aerosol boundary conditions in PALM</alt-title>
      </title-group><?xmltex \runningtitle{Sensitivity to aerosol boundary conditions in PALM}?><?xmltex \runningauthor{M. Kurppa et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Kurppa</surname><given-names>Mona</given-names></name>
          <email>mona.kurppa@helsinki.fi</email>
        <ext-link>https://orcid.org/0000-0003-2538-1068</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Roldin</surname><given-names>Pontus</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4223-4708</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Strömberg</surname><given-names>Jani</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Balling</surname><given-names>Anna</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7081-0920</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Karttunen</surname><given-names>Sasu</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-1723-2935</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Kuuluvainen</surname><given-names>Heino</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Niemi</surname><given-names>Jarkko V.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Pirjola</surname><given-names>Liisa</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Rönkkö</surname><given-names>Topi</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Timonen</surname><given-names>Hilkka</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-7987-7985</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Hellsten</surname><given-names>Antti</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff7">
          <name><surname>Järvi</surname><given-names>Leena</given-names></name>
          <email>leena.jarvi@helsinki.fi</email>
        <ext-link>https://orcid.org/0000-0002-5224-3448</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Institute for Atmospheric and Earth System Research, Faculty of Science, University of Helsinki, Helsinki, Finland</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Division of Nuclear Physics, Lund University, Lund, Sweden</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Aerosol Physics Laboratory, Physics Unit, Tampere University, Tampere, Finland</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Helsinki Region Environmental Services Authority (HSY), Helsinki, Finland</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Department of Automotive and Mechanical Engineering, Metropolia University of Applied Sciences, Vantaa, Finland</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>Atmospheric Composition Research, Finnish Meteorological Institute, Helsinki, Finland</institution>
        </aff>
        <aff id="aff7"><label>7</label><institution>Helsinki Institute of Sustainability Science, University of Helsinki, Helsinki, Finland</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Mona Kurppa (mona.kurppa@helsinki.fi) and Leena Järvi (leena.jarvi@helsinki.fi)</corresp></author-notes><pub-date><day>18</day><month>November</month><year>2020</year></pub-date>
      
      <volume>13</volume>
      <issue>11</issue>
      <fpage>5663</fpage><lpage>5685</lpage>
      <history>
        <date date-type="received"><day>26</day><month>May</month><year>2020</year></date>
           <date date-type="rev-request"><day>8</day><month>June</month><year>2020</year></date>
           <date date-type="rev-recd"><day>20</day><month>September</month><year>2020</year></date>
           <date date-type="accepted"><day>12</day><month>October</month><year>2020</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2020 Mona Kurppa et al.</copyright-statement>
        <copyright-year>2020</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020.html">This article is available from https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020.html</self-uri><self-uri xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020.pdf">The full text article is available as a PDF file from https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e224">High-resolution modelling is needed to understand urban air quality and pollutant dispersion in detail. Recently, the PALM model system 6.0, which is based on large-eddy simulation (LES), was extended with the detailed Sectional Aerosol module for Large Scale Applications (SALSA) v2.0 to enable studying the complex interactions between the turbulent flow field and aerosol dynamic processes. This study represents an extensive evaluation of the modelling system against the horizontal and vertical distributions of aerosol particles measured using a mobile laboratory and a drone in an urban neighbourhood in Helsinki, Finland. Specific emphasis is on the model sensitivity of aerosol particle concentrations, size distributions and chemical compositions to boundary conditions of meteorological variables and aerosol background concentrations. The meteorological boundary conditions are taken from both a numerical weather prediction model and observations, which occasionally differ strongly.
Yet, the model shows good agreement with measurements (fractional bias <inline-formula><mml:math id="M1" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.67</mml:mn></mml:mrow></mml:math></inline-formula>, normalised mean squared error <inline-formula><mml:math id="M2" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula>, fraction of the data within a factor of 2 <inline-formula><mml:math id="M3" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn></mml:mrow></mml:math></inline-formula>, normalised mean bias factor <inline-formula><mml:math id="M4" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.25</mml:mn></mml:mrow></mml:math></inline-formula> and normalised mean absolute error factor <inline-formula><mml:math id="M5" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.35</mml:mn></mml:mrow></mml:math></inline-formula>) with respect to both horizontal and vertical distribution of aerosol particles, their size distribution and chemical composition.
The horizontal distribution is most sensitive to the wind speed and atmospheric stratification, and vertical distribution to the wind direction. The aerosol number size distribution is mainly governed by the flow field along the main street with high traffic rates and in its surroundings by the background concentrations. The results emphasise the importance of correct meteorological and aerosol background boundary conditions, in addition to accurate emission estimates and detailed model physics, in quantitative high-resolution air pollution modelling and future urban LES studies.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e286">Exposure to outdoor air pollution is a major global threat resulting up to 0.8 million premature deaths in Europe <xref ref-type="bibr" rid="bib1.bibx47" id="paren.1"/> and 3 million worldwide <xref ref-type="bibr" rid="bib1.bibx46 bib1.bibx78" id="paren.2"/> every year. Specifically, aerosol particles can be extremely harmful, and based on a recent study by <xref ref-type="bibr" rid="bib1.bibx12" id="text.3"/> outdoor fine particulate air pollution (<inline-formula><mml:math id="M6" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PM</mml:mi><mml:mn mathvariant="normal">2.5</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) solely could have caused up to 8.9 million deaths worldwide in 2015. As over half of the global population lives in cities <xref ref-type="bibr" rid="bib1.bibx74" id="paren.4"><named-content content-type="pre">55 % according to</named-content></xref>, urban air quality is of major importance. In addition to high population densities, urban areas are characterised by major air pollutant sources, namely traffic exhaust and road dust, being at the same height where urban dwellers inhale outdoor air. However, the dispersion of these traffic-related pollutants<?pagebreak page5664?> is not straightforward as buildings, trees and other obstacles modify the flow within the urban canopy and hence also pollutant dispersion <xref ref-type="bibr" rid="bib1.bibx73" id="paren.5"/> as well as the environment for aerosol dynamic processes and chemical reactions to occur.</p>
      <p id="d1e318">As a consequence of the complex interactions between the urban morphology, meteorology, local emissions and air pollutant dynamics and chemistry, air quality is highly variable both in time and space, and strong concentration gradients are observed in urban areas. However, measurements from a single monitoring station nearest to the individual's residence, hospital, or primary health care clinic have commonly been applied in air pollution exposure studies <xref ref-type="bibr" rid="bib1.bibx3 bib1.bibx2" id="paren.6"/>, which can lead to notable errors. Moreover, both the size and chemical composition of aerosol particles are of major importance when it comes to their health impacts <xref ref-type="bibr" rid="bib1.bibx34 bib1.bibx35" id="paren.7"/>. For instance, particle deposition in lungs depends strongly on the inhaled particle size <xref ref-type="bibr" rid="bib1.bibx30" id="paren.8"/>, and thus the negative health effects of aerosol particles have been found to correlate more strongly with the surface area of particles than their number or mass <xref ref-type="bibr" rid="bib1.bibx11 bib1.bibx61" id="paren.9"/>.</p>
      <p id="d1e333">Computational fluid dynamics (CFD) models have been successfully applied in studying the air flow and dispersion of air pollutants in urban areas. Mainly models based on either Reynolds-averaged Navier–Stokes <xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx45 bib1.bibx69" id="paren.10"><named-content content-type="pre">RANS; e.g.</named-content></xref> or large-eddy simulation <xref ref-type="bibr" rid="bib1.bibx21 bib1.bibx48 bib1.bibx68" id="paren.11"><named-content content-type="pre">LES; e.g.</named-content></xref> have been utilised. While being computationally more expensive than RANS, LES has been shown to perform better in resolving instantaneous turbulence structures in a complex urban environment <xref ref-type="bibr" rid="bib1.bibx21 bib1.bibx68" id="paren.12"/>. Further, air pollutant concentrations can be significantly modified by their chemical and physical processes <xref ref-type="bibr" rid="bib1.bibx41 bib1.bibx56 bib1.bibx86" id="paren.13"/>, especially as the residence time of air pollutants is increased in a complex urban environment <xref ref-type="bibr" rid="bib1.bibx22 bib1.bibx64" id="paren.14"/>. Therefore, a detailed module describing the characteristics of air pollutants and their dynamics is needed to enable modelling aerosol particles of different size, chemical composition and harmfulness. To date, only a few LES models include a module for treating aerosol particles with a specific size distribution and chemical composition and their dynamic processes <xref ref-type="bibr" rid="bib1.bibx41 bib1.bibx71 bib1.bibx86" id="paren.15"/>.</p>
      <p id="d1e359">The Sectional Aerosol module for Large Scale Applications (SALSA) <xref ref-type="bibr" rid="bib1.bibx36" id="paren.16"/> was recently implemented to the PALM model system <xref ref-type="bibr" rid="bib1.bibx41" id="paren.17"/> to consider the impact of aerosol dynamic processes on aerosol concentrations and size distributions and to study the relative importance of pollutant dispersion and aerosol dynamic processes. A model evaluation by <xref ref-type="bibr" rid="bib1.bibx41" id="text.18"/> in central Cambridge, UK, showed the model to be capable of reproducing the vertical distributions of aerosol size distribution in a simple street canyon. However, due to the lack of observations, the capability of the model to reproduce the horizontal distributions of aerosol particles has not been studied yet. Also the meteorological conditions were limited to a single day and the examined street canyon had no vegetation.</p>
      <p id="d1e372">Still, even if the air pollutant processes would be modelled accurately, correct boundary conditions for the meteorological variables and air pollutant concentrations are vital for realistic air quality simulations. Boundary conditions can be drawn from observations, which  are however typically point measurements that lack spatial representatives and also are prone to measurement errors. Another alternative is to use model data, which provide a good spatial coverage but not necessarily stable performance in all prevailing weather conditions. Previously, CFD models have been successfully coupled with mesoscale models to study the impact of larger-scale atmospheric features on microscale interactions <xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx25 bib1.bibx49 bib1.bibx52 bib1.bibx82" id="paren.19"><named-content content-type="pre">e.g.</named-content></xref> as well as to consider realistic air pollutant background concentrations <xref ref-type="bibr" rid="bib1.bibx45" id="paren.20"/>. Recently, <xref ref-type="bibr" rid="bib1.bibx69" id="text.21"/> investigated the sensitivity of RANS-based urban <inline-formula><mml:math id="M7" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PM</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (particulate matter with aerodynamic diameter <inline-formula><mml:math id="M8" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 10 <inline-formula><mml:math id="M9" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>) simulations on the meteorological boundary conditions and showed the model performance to be improved when replacing the wind direction (WD) predicted by the Weather Research and Forecasting (WRF) model with the observed WD. However, <xref ref-type="bibr" rid="bib1.bibx69" id="text.22"/> only modelled passive <inline-formula><mml:math id="M10" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PM</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> without taking into account chemical or physical transformation of aerosol particles. Hence, it is still unclear how much uncertainty in aerosol particle concentrations and size distributions is caused by model boundary conditions.</p>
      <p id="d1e429">To further assess the performance of SALSA2.0 in the PALM model system 6.0 in simulating the spatial distribution of aerosol particle concentrations in an urban area and to examine the importance of meteorological and aerosol background boundary conditions, we will use observations made during an extensive measurement campaign in an urban neighbourhood in Helsinki, Finland, in summer and winter 2017. The campaign focused on the spatial variability of aerosol particle number, surface area and mass both in horizontal and vertical as well as aerosol size distributions and chemical composition. The observations were carried out with a high temporal and spatial resolution using a mobile laboratory and a drone. The model is evaluated at three observation periods with different prevailing meteorological conditions.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><label>Figure 1</label><caption><p id="d1e434">The modelling domain: root in grey, parent in viridis (dashed line) and child in rainbow (solid line). The grid size of the MEPS data is illustrated with a red area and dotted lines. The background air quality monitoring sites are marked with an  empty red <inline-formula><mml:math id="M11" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> sign (SMEAR III) and an  empty red <inline-formula><mml:math id="M12" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> sign (Kallio). In the zoomed figure over the child domain, the supersite is marked with a black circle and the background measurement point of the Sniffer mobile laboratory with a grey circle.</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020-f01.png"/>

      </fig>

</sec>
<?pagebreak page5665?><sec id="Ch1.S2">
  <label>2</label><title>Measurements</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Measurement campaign</title>
      <p id="d1e472">The model evaluation and sensitivity study is conducted around an Helsinki Region Environmental Services Authority (HSY) air quality monitoring site, hereafter referred to as the “supersite”, in Helsinki, Finland (60<inline-formula><mml:math id="M13" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>11<inline-formula><mml:math id="M14" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>47<inline-formula><mml:math id="M15" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:math></inline-formula> N, 24<inline-formula><mml:math id="M16" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>57<inline-formula><mml:math id="M17" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>07<inline-formula><mml:math id="M18" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:math></inline-formula> E). The site is located 3 <inline-formula><mml:math id="M19" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> north–northeast from the Helsinki city centre, and it is characterised as an urban street-canyon curbside station with a traffic rate of around 28 000 on a workday, of which 12 % are heavy-duty vehicles <xref ref-type="bibr" rid="bib1.bibx16" id="paren.23"/>. The street canyon is 42 <inline-formula><mml:math id="M20" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> wide and the mean building height is around 19 <inline-formula><mml:math id="M21" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> on the southwestern and 16 <inline-formula><mml:math id="M22" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> on the northeastern side of the street <xref ref-type="bibr" rid="bib1.bibx44" id="paren.24"><named-content content-type="pre">see Fig. 1 in</named-content></xref>, resulting in a height-to-width ratio of 0.42. The supersite consists of a container (length 8.0 <inline-formula><mml:math id="M23" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>, width 1.7 <inline-formula><mml:math id="M24" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> and height 2.7 <inline-formula><mml:math id="M25" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>) equipped with standard air quality measurement devices measuring from 4 <inline-formula><mml:math id="M26" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> above ground level.</p>
      <p id="d1e609">To get information about the spatial variability of air pollutants around the supersite, a 2-week measurement campaign was conducted in summer (6–16 June) and winter (28 November–11 December) 2017. During both campaigns, the horizontal distribution of air pollutants in the neighbourhood was monitored on non-rainy days using a mobile laboratory, and additionally during two intensive observation periods the vertical profiles of aerosol particles were measured using a drone.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e615">Instrumentation of the  Sniffer mobile laboratory. Abbreviations: PSD is the aerosol particle number size distribution, <inline-formula><mml:math id="M27" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the total aerosol particle number concentration, and <inline-formula><mml:math id="M28" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PM</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is the mass of particulate matter with aerodynamic diameter <inline-formula><mml:math id="M29" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 1 <inline-formula><mml:math id="M30" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Measured component</oasis:entry>
         <oasis:entry colname="col2">Instrument</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">PSD (5.6–560 <inline-formula><mml:math id="M31" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">Engine exhaust particle  sizer (EEPS, model 3090, TSI)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">PSD (7 <inline-formula><mml:math id="M32" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula>–10 <inline-formula><mml:math id="M33" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">Electrical low-pressure impactor  (ELPI, Dekati Ltd.)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M35" display="inline"><mml:mo lspace="0mm">&gt;</mml:mo></mml:math></inline-formula> 2.5 <inline-formula><mml:math id="M36" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">Butanol condensation particle counter (CPC, model 3776, TSI)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Black carbon (in <inline-formula><mml:math id="M37" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PM</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2">Aethalometer (model AE33, Magee Scientific)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <?pagebreak page5666?><p id="d1e780">The  Sniffer mobile laboratory <xref ref-type="bibr" rid="bib1.bibx62" id="paren.25"/> measured the horizontal distribution of trace gases and aerosol particle concentrations and size distribution. The measurements were done in 1–2 h slots with a 1 s temporal resolution during the morning and afternoon rush hours, around noon and in the late evening. During each observation period, the Sniffer was driving along a main street (Mäkelänkatu) and a side street as well as standing at the supersite, opposite the supersite and on a field 185 <inline-formula><mml:math id="M38" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> from the main street (hereafter the “background”). The instrumentation of the Sniffer is given in Table <xref ref-type="table" rid="Ch1.T1"/> and the measurement locations in Fig. S1 in the Supplement. The main inlet was situated above the windshield at 2.4 <inline-formula><mml:math id="M39" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> and a global positioning system (model GPS V, Garmin) recorded the van speed and position. For a detailed description of the Sniffer, see <xref ref-type="bibr" rid="bib1.bibx18 bib1.bibx63" id="text.26"/>.</p>
      <p id="d1e807">During the intensive observation periods, a multi-rotor drone (X8, VideoDrone Finland Ltd.) carried an electrical particle sensor (Partector, Naneos GmbH) to measure the vertical distribution of the alveolar lung-deposited surface area (LDSA) of aerosol particles, which describes the total aerosol surface area penetrating the deepest parts of the lungs <xref ref-type="bibr" rid="bib1.bibx43" id="paren.27"><named-content content-type="pre">see, e.g.</named-content><named-content content-type="post">and references within</named-content></xref>. The measurement were done on both sides of the street canyon when the Sniffer was simultaneously driving. The drone was flown 10 times up and down between <inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> and 50 <inline-formula><mml:math id="M41" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> during one 30 min measurement interval, after which measurements were repeated on the other side. Each intensive observation period started by measuring LDSA at the supersite and ended on the other side. Measurements were started at 3 <inline-formula><mml:math id="M42" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> from the building wall and the horizontal location was kept constant with a GPS sensor of the drone. Additionally, LDSA was measured at the supersite by a Pegasor AQ Urban sensor (Pegasor Ltd.) and on the other side by a DiSCmini (Testo Ltd.) or with another Partector at 1 <inline-formula><mml:math id="M43" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> and in winter also at 14 <inline-formula><mml:math id="M44" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>. For the details of the instrumentation, see <xref ref-type="bibr" rid="bib1.bibx44" id="text.28"/>.</p>
      <p id="d1e865">The sensitivity of the results to the PALM model boundary conditions is examined during the following three periods: the morning (07:16–09:15 LT) and evening (20:26–21:14 LT) of 9 June, and the morning (07:20–09:14 LT) of 12 December.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Additional measurements</title>
      <p id="d1e876">In addition to the Sniffer and drone measurements, we use stationary aerosol observations from the supersite and two urban background monitoring sites: Kallio site operated by HSY and SMEAR III <xref ref-type="bibr" rid="bib1.bibx31" id="paren.29"><named-content content-type="pre">Station for Measuring Ecosystem Atmospheric relations;</named-content></xref> around 1.0 <inline-formula><mml:math id="M45" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> southwest and 0.8 <inline-formula><mml:math id="M46" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> northeast from the supersite, respectively (Fig. <xref ref-type="fig" rid="Ch1.F1"/>). See Table S1 for the instrumentation. In addition to aerosol observations, meteorological data (wind speed, wind direction, air temperature) from the SMEAR III measurement tower (<inline-formula><mml:math id="M47" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">31</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M48" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>) and Kivenlahti meteorological measurement mast 17.4 <inline-formula><mml:math id="M49" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> west from the supersite <xref ref-type="bibr" rid="bib1.bibx81" id="paren.30"/> are used in the study.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Simulations</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Model description</title>
      <p id="d1e950">This study applies the PALM model system, version 6.0 (revision 4416) <xref ref-type="bibr" rid="bib1.bibx50 bib1.bibx51" id="paren.31"/>, which features an LES core for atmospheric and oceanic boundary layer flows. PALM solves the non-hydrostatic, filtered, incompressible Navier–Stokes equations of wind (<inline-formula><mml:math id="M50" display="inline"><mml:mi>u</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M51" display="inline"><mml:mi>v</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M52" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula>) and scalar variables (subgrid-scale turbulent kinetic energy <inline-formula><mml:math id="M53" display="inline"><mml:mi>e</mml:mi></mml:math></inline-formula>, potential temperature <inline-formula><mml:math id="M54" display="inline"><mml:mi mathvariant="italic">θ</mml:mi></mml:math></inline-formula> and specific humidity <inline-formula><mml:math id="M55" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula>) in Boussinesq-approximated form. PALM is especially suitable for complex urban areas, due to its features such as a Cartesian topography scheme and a plant canopy module, which are applied here to include the aerodynamic impact of both solid buildings and permeable vegetation on the flow. Furthermore, the so-called PALM-4U (short for PALM for urban applications) components have recently been implemented in PALM <xref ref-type="bibr" rid="bib1.bibx51" id="paren.32"/>, including the SALSA aerosol module, the online chemistry module and the self-nesting and offline nesting features, which are all applied in this study.</p>
      <?pagebreak page5667?><p id="d1e1002">SALSA <xref ref-type="bibr" rid="bib1.bibx36 bib1.bibx41" id="paren.33"/> describes an aerosol size distribution by a number of size bins (10 by default), and each bin can be composed of different chemical components. Chemical components included are sulfuric acid (<inline-formula><mml:math id="M56" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>), organic carbon (<inline-formula><mml:math id="M57" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OC</mml:mi></mml:mrow></mml:math></inline-formula>), black carbon (<inline-formula><mml:math id="M58" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BC</mml:mi></mml:mrow></mml:math></inline-formula>), nitric acid (<inline-formula><mml:math id="M59" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>), ammonia (<inline-formula><mml:math id="M60" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>), sea salt, dust and water (<inline-formula><mml:math id="M61" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>). SALSA contains the following aerosol dynamic processes: coagulation, nucleation, dry deposition on solid surfaces and resolved-scale vegetation, and condensation and dissolutional growth by gaseous <inline-formula><mml:math id="M62" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M63" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M64" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and semi- and non-volatile organics (<inline-formula><mml:math id="M65" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">SVOC</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M66" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NVOC</mml:mi></mml:mrow></mml:math></inline-formula>). The gaseous compounds can be transferred to SALSA from the online chemistry module, which is based on the Kinetic Pre-Processor <xref ref-type="bibr" rid="bib1.bibx17" id="paren.34"><named-content content-type="pre">KPP;</named-content></xref> version 2.2.3 and an adapted version of the KP<inline-formula><mml:math id="M67" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msup></mml:math></inline-formula> pre-processing tool <xref ref-type="bibr" rid="bib1.bibx32" id="paren.35"/>. The implementation is flexible, allowing the user to choose the chemical mechanism and components being considered. In this study, a simplified mechanism describing photochemical smog is applied (see Sect. S3.2 in the Supplement). Photolysis is parameterised based on <xref ref-type="bibr" rid="bib1.bibx70" id="text.36"/>. However, the transfer of different organic vapours from the chemistry module to SALSA is still under development.</p>
      <p id="d1e1151">To capture the dominant turbulent eddies of the atmospheric boundary layer (ABL) in LES, the horizontal extent of the modelling domain should span over several ABL heights; see, e.g. <xref ref-type="bibr" rid="bib1.bibx20 bib1.bibx14 bib1.bibx8" id="altparen.37"/>. At the same time, to resolve most of the kinetic energy within street canyons, a high enough grid resolution (on the order of <inline-formula><mml:math id="M68" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 1 <inline-formula><mml:math id="M69" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>) is needed <xref ref-type="bibr" rid="bib1.bibx83" id="paren.38"/>. Furthermore, uncertainty arising from the lateral boundary conditions usually decreases with increasing horizontal dimensions. To fulfill these contradicting requirements, a self-nesting feature has been included in PALM <xref ref-type="bibr" rid="bib1.bibx26 bib1.bibx51" id="paren.39"/>. In self-nesting, one or several child domains are nested within a parent domain and the child obtains its boundary conditions from its parent. Furthermore, PALM incorporates an automated mesoscale offline nesting with a mesoscale operational weather prediction model, which allows realistic, non-cyclic and non-stationary boundary conditions for the flow. As the mesoscale data do not contain resolved-scale turbulence, turbulence must first be developed within the PALM domain. To reduce the time and distance for the mesoscale flow field to adjust and turbulence to develop within the LES modelling domain, a synthetic turbulence generator within PALM can be applied.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e1182">Dimensions (<inline-formula><mml:math id="M70" display="inline"><mml:mi>L</mml:mi></mml:math></inline-formula>), number of grid points (<inline-formula><mml:math id="M71" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula>) and grid resolutions (<inline-formula><mml:math id="M72" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>) of the model domains in the <inline-formula><mml:math id="M73" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M74" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M75" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> directions.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Domain</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mi>x</mml:mi></mml:msub><mml:mo>×</mml:mo><mml:msub><mml:mi>L</mml:mi><mml:mi>y</mml:mi></mml:msub><mml:mo>×</mml:mo><mml:msub><mml:mi>L</mml:mi><mml:mi>z</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M82" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>x</mml:mi></mml:msub><mml:mo>×</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mi>y</mml:mi></mml:msub><mml:mo>×</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mi>z</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M87" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Root</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M88" display="inline"><mml:mrow><mml:mn mathvariant="normal">6912</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">6912</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">606</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:mn mathvariant="normal">768</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">768</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">80</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">9.0, 9.0, 6.0<inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Parent</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:mn mathvariant="normal">2304</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2304</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">288</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M92" display="inline"><mml:mrow><mml:mn mathvariant="normal">768</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">768</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">96</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">3.0, 3.0, 3.0</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Child</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:mn mathvariant="normal">576</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">576</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">144</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:mn mathvariant="normal">576</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">576</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">144</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">1.0, 1.0, 1.0</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e1228"><inline-formula><mml:math id="M76" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula> <inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is stretched with a factor of 1.03 above <inline-formula><mml:math id="M78" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">300</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M79" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>, resulting in a total domain height of 606 <inline-formula><mml:math id="M80" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>.</p></table-wrap-foot></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><?xmltex \currentcnt{3}?><label>Table 3</label><caption><p id="d1e1551">Unit emission factors for traffic combustion (<inline-formula><mml:math id="M95" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">s</mml:mi></mml:mrow></mml:math></inline-formula> is solid and <inline-formula><mml:math id="M96" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">g</mml:mi></mml:mrow></mml:math></inline-formula> is gaseous) on 9 June between 07:00 and 08:00 LT in units of <inline-formula><mml:math id="M97" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M98" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">g</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">vehicle</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>. Abbreviations: <inline-formula><mml:math id="M99" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">PM</mml:mi></mml:mrow></mml:math></inline-formula> is the total mass of particulate matter, <inline-formula><mml:math id="M100" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BC</mml:mi></mml:mrow></mml:math></inline-formula> is black carbon, <inline-formula><mml:math id="M101" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OC</mml:mi></mml:mrow></mml:math></inline-formula> is organic carbon, <inline-formula><mml:math id="M102" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> is nitrous oxide, <inline-formula><mml:math id="M103" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is nitrous dioxide, <inline-formula><mml:math id="M104" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">SVOC</mml:mi></mml:mrow></mml:math></inline-formula> is semi-volatile organic carbon, <inline-formula><mml:math id="M105" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">RH</mml:mi></mml:mrow></mml:math></inline-formula> is alkanes, <inline-formula><mml:math id="M106" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is sulfuric acid, <inline-formula><mml:math id="M107" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> is nitrous oxide, and <inline-formula><mml:math id="M108" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is ammonia.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="11">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:colspec colnum="7" colname="col7" align="left"/>
     <oasis:colspec colnum="8" colname="col8" align="left"/>
     <oasis:colspec colnum="9" colname="col9" align="left"/>
     <oasis:colspec colnum="10" colname="col10" align="left"/>
     <oasis:colspec colnum="11" colname="col11" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M109" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">PM</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M110" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BC</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">s</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M111" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OC</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">s</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M112" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M113" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="normal">g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M114" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">SVOC</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M115" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">RH</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M116" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="normal">g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col9"><inline-formula><mml:math id="M117" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col10"><inline-formula><mml:math id="M118" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="normal">g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col11">Fuel</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">1.4</oasis:entry>
         <oasis:entry colname="col2">1.0</oasis:entry>
         <oasis:entry colname="col3">0.3</oasis:entry>
         <oasis:entry colname="col4">49.4</oasis:entry>
         <oasis:entry colname="col5">13.9</oasis:entry>
         <oasis:entry colname="col6">0.039</oasis:entry>
         <oasis:entry colname="col7">1.5</oasis:entry>
         <oasis:entry colname="col8">0.01</oasis:entry>
         <oasis:entry colname="col9">1.0</oasis:entry>
         <oasis:entry colname="col10">3.5</oasis:entry>
         <oasis:entry colname="col11">9.8<inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Model domain and morphological data</title>
      <p id="d1e1973">The model simulations are conducted over a root domain of 6.9 <inline-formula><mml:math id="M120" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M121" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 6.9 <inline-formula><mml:math id="M122" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula>, within which two smaller domains, parent and child, are nested progressively (Fig. <xref ref-type="fig" rid="Ch1.F1"/>). The dimensions (<inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mi>z</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), number of grid points (<inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M127" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>z</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) and grid resolutions (<inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M130" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) of each domain are given in Table <xref ref-type="table" rid="Ch1.T2"/>.
In this study, the focus is on the child domain which matches with the area of the spatial aerosol measurements around the supersite.</p>
      <p id="d1e2104">Information on the building and vegetation height and land surface elevation are taken from high-resolution raster maps for Helsinki <xref ref-type="bibr" rid="bib1.bibx6" id="paren.40"/>. The manipulation of the domain input files is done using the Python library P4UL <xref ref-type="bibr" rid="bib1.bibx7" id="paren.41"/>. Only vegetation higher than <inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mrow><mml:mi mathvariant="normal">v</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">min</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">4.0</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M133" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> is included in the simulations. Due to the lack of observational data on the leaf area density (<inline-formula><mml:math id="M134" display="inline"><mml:mi mathvariant="normal">LAD</mml:mi></mml:math></inline-formula>) of vegetation, a constant LAD value is applied for all tree crowns above <inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mrow><mml:mi mathvariant="normal">v</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">min</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>. In summer, <inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:mi mathvariant="normal">LAD</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.2</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M137" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace width="0.25em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for broadleaf trees <xref ref-type="bibr" rid="bib1.bibx1" id="paren.42"/>, while in winter LAD is decreased to 20 % of the summertime value.</p>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Meteorological boundary conditions</title>
      <p id="d1e2208">We apply both modelled and observed data as meteorological boundary conditions, which are set dynamic; i.e. they change with time.</p>
      <p id="d1e2211">As modelled data, numerical weather prediction data from MetCoOp Ensemble Prediction System <xref ref-type="bibr" rid="bib1.bibx10 bib1.bibx54" id="paren.43"><named-content content-type="pre">MEPS;</named-content></xref> are applied. MEPS data were downloaded from the data archive <xref ref-type="bibr" rid="bib1.bibx59" id="paren.44"/> using the File Interpolation, Manipulation and EXtraction (Fimex) library <xref ref-type="bibr" rid="bib1.bibx58" id="paren.45"/>. MEPS has a horizontal resolution of 2.5 <inline-formula><mml:math id="M138" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> (see Fig. <xref ref-type="fig" rid="Ch1.F1"/>), 65 vertical levels and 10 ensemble members. It ran four times daily with a 3-hourly cycling for data assimilation (3D-Var). The lateral boundary data are from the European Centre for Medium-Range Forecasts (ECMWF) high-resolution (HRES) atmospheric model. In this study, the MEPS control run, i.e. ensemble member 0 with unperturbed initial and lateral boundary conditions, is used.</p>
      <p id="d1e2235">Data from the Kivenlahti mast are downloaded from Finnish Meteorological Institute (FMI) Open Data service <xref ref-type="bibr" rid="bib1.bibx19" id="paren.46"/> as 10 min averaged data. On the mast, meteorological observations are conducted at three to eight measurement levels between <inline-formula><mml:math id="M139" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">327</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M140" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>. Despite being located 17.4 <inline-formula><mml:math id="M141" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> from the supersite, the closest observations of the vertical profile of basic meteorological variables are conducted at Kivenlahti. Meteorological observations from the SMEAR III station at <inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">31</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M143" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> are downloaded using the SmartSMEAR tool <xref ref-type="bibr" rid="bib1.bibx33" id="paren.47"/>.</p>
      <p id="d1e2297">The initial conditions and dynamic meteorological boundary data are provided to PALM in a so-called dynamic driver. Of the MEPS data, the dynamic driver was created by the following procedure. First, the sigma coordinates were translated to pressure coordinates and further to height coordinates applying the hypsometric equation. Then, <inline-formula><mml:math id="M144" display="inline"><mml:mi>u</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M145" display="inline"><mml:mi>v</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M146" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M147" display="inline"><mml:mi mathvariant="italic">θ</mml:mi></mml:math></inline-formula> and water vapour mixing ratio <inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi>v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> were interpolated from the MEPS grid to the PALM grid: first in horizontal over a two-dimensional grid using the cubic spline method and then in vertical using the linear interpolation. The Kivenlahti mast observations, instead, were linearly interpolated in the vertical to the highest observation level, after which a constant value was used. When applying the SMEAR III data, constant values are used for the entire vertical profile. The dynamic driver created from the observational data does not include any horizontal variation.</p>
      <p id="d1e2340">A mesoscale interface, INIFOR, has been developed to transform mesoscale modelling data into PALM-readable boundary data. However, it is currently only available for COSMO-DE/D2 datasets, which do not cover Finland.</p>
</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>Air pollutant background concentrations</title>
      <?pagebreak page5668?><p id="d1e2351">Similar to the meteorological boundary conditions (Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/>), both modelled and observed air quality data are used as background concentrations in the simulations. As in the previous model evaluation study <xref ref-type="bibr" rid="bib1.bibx41" id="paren.48"/>, the modelled background aerosol particle number and trace gas concentrations are produced with the trajectory model for Aerosol Dynamics, gas and particle phase CHEMistry and radiative transfer <xref ref-type="bibr" rid="bib1.bibx66 bib1.bibx65 bib1.bibx67" id="paren.49"><named-content content-type="pre">ADCHEM;</named-content></xref>. ADCHEM is operated as a one-dimensional column trajectory model along the Hybrid Single-Particle Lagrangian Integrated Trajectory (HYSPLIT) <xref ref-type="bibr" rid="bib1.bibx72" id="paren.50"/> air mass trajectories, starting 7 d backwards in time (see Figs. S2 and S3 in the Supplement). The gas and aerosol particle compositions and size distributions are simulated along the back trajectories arriving to the coordinates of the supersite. For the emission inventories and parameterisations applied, see Sect. S3.4 in the Supplement. Detailed descriptions of the aerosol and cloud microphysics, new particle formation and gas-phase chemistry mechanisms in ADCHEM are provided by <xref ref-type="bibr" rid="bib1.bibx67" id="text.51"/> and references therein.</p>
      <p id="d1e2370">To investigate the impact of the background aerosol size distribution (PSD) and concentration on the model simulations, PSD measurements from SMEAR III (see Sect. <xref ref-type="sec" rid="Ch1.S2"/>) are applied as an alternative for the modelled values. For simplicity, ADCHEM data are always used for the chemical composition of aerosol particles and gaseous concentrations.</p>
      <p id="d1e2375">For each PALM simulation, the concentrations are averaged over the simulation time and these temporally constant vertical profiles are then introduced to the simulation domain by a decycling method, in which background concentrations are fixed at the lateral boundaries.</p>
</sec>
<sec id="Ch1.S3.SS5">
  <label>3.5</label><title>Air pollutant emissions</title>
      <p id="d1e2387">In this study, air pollutant emissions only from traffic combustion are included, as traffic is the main pollutant source within the modelling domain <xref ref-type="bibr" rid="bib1.bibx27" id="paren.52"/>. Traffic-lane maps separating different road categories, i.e. main streets, collector roads and residential streets, have been generated by combining lane and street type information from the Map Service <xref ref-type="bibr" rid="bib1.bibx15" id="paren.53"/>. The lane width is 3.5 <inline-formula><mml:math id="M149" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>. Emissions are introduced as dynamic surface fluxes.</p>
      <p id="d1e2404">Aerosol particle emission inventories are typically provided as total mass emission factors <inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">PM</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>. In SALSA, these would need to be translated to number emission factors <inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mi>N</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, assuming some size distribution for the emitted aerosol particles. However, converting aerosol mass to number is highly sensitive to the assumed size distribution. Therefore, in this study, we choose to apply a number emission factor <inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mi>N</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">4.22</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">15</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M153" display="inline"><mml:mrow class="unit"><mml:msubsup><mml:mi mathvariant="normal">kg</mml:mi><mml:mi mathvariant="normal">fuel</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula> based on fuel consumption and a number size distribution estimated by <xref ref-type="bibr" rid="bib1.bibx28" id="text.54"/> at the supersite in May 2017 (see Fig. S4 in the Supplement).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><?xmltex \currentcnt{2}?><label>Figure 2</label><caption><p id="d1e2473">Horizontal <bold>(a)</bold> wind speed <inline-formula><mml:math id="M154" display="inline"><mml:mi>U</mml:mi></mml:math></inline-formula> (<inline-formula><mml:math id="M155" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>), <bold>(b)</bold> WD (<inline-formula><mml:math id="M156" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>) and <bold>(c)</bold> air temperature <inline-formula><mml:math id="M157" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> (<inline-formula><mml:math id="M158" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>) on 9 June at local time (UTC<inline-formula><mml:math id="M159" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>3). The modelled profiles at each MEPS grid point are shown by solid  grey lines and their mean by a dashed black  line. The observations from the Kivenlahti mast are shown by solid green  squares and the interpolated profiles used as boundary conditions by a solid green  line. Stars show the SMEAR III observations.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020-f02.png"/>

        </fig>

      <p id="d1e2553">For gaseous compounds, mass composition of aerosol particles and fuel, unit emission factors <inline-formula><mml:math id="M160" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mrow><mml:mo>[</mml:mo><mml:mi mathvariant="normal">compound</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (Table <xref ref-type="table" rid="Ch1.T3"/>) are calculated using emission inventory by the European Environmental Agency for 2017 <xref ref-type="bibr" rid="bib1.bibx60" id="paren.55"/> and specifically the tier 3 method, which applies information on the mileage per vehicle category and technology, and driving speed. However, since no information on the cumulative mileage for different Euro classes was available,  <inline-formula><mml:math id="M161" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="normal">g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M162" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> are based on the tier 1 method <xref ref-type="bibr" rid="bib1.bibx60" id="paren.56"><named-content content-type="pre">see</named-content><named-content content-type="post">Eq. 28</named-content></xref>. Furthermore, the following estimates were applied: <inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">SVOC</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.01</mml:mn><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">NMOG</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx85" id="paren.57"><named-content content-type="post">Fig. 2</named-content></xref>, <inline-formula><mml:math id="M164" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">RH</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.4</mml:mn><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">NMOG</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx29" id="paren.58"><named-content content-type="post">Fig. 4</named-content></xref>, where <inline-formula><mml:math id="M165" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NMOG</mml:mi></mml:mrow></mml:math></inline-formula> stands for non-methane organic gas and <inline-formula><mml:math id="M166" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">RH</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> for alkanes, and <inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="normal">g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn><mml:mspace width="0.25em" linebreak="nobreak"/><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx4 bib1.bibx5 bib1.bibx53" id="paren.59"/>. Emitted aerosol particles smaller than <inline-formula><mml:math id="M168" display="inline"><mml:mn mathvariant="normal">15</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M169" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula> in diameter are assumed to be composed of 75 % <inline-formula><mml:math id="M170" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OC</mml:mi></mml:mrow></mml:math></inline-formula> and 25 % <inline-formula><mml:math id="M171" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, whereas larger particles contain 72 % <inline-formula><mml:math id="M172" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BC</mml:mi></mml:mrow></mml:math></inline-formula>, 21 % <inline-formula><mml:math id="M173" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OC</mml:mi></mml:mrow></mml:math></inline-formula> and 7 % <inline-formula><mml:math id="M174" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> as estimated from <inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">PM</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">BC</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">EF</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">OC</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>.</p>
      <?pagebreak page5669?><p id="d1e2870">The hourly vehicle fleet compositions for the neighbourhood are obtained from the Helsinki Region Environmental Services Authority (HSY and Urban Environment Division of the City of Helsinki, personal communication, 1 October 2018), the mileage for each vehicle technology from the ALIISA model <xref ref-type="bibr" rid="bib1.bibx77" id="paren.60"/> and the fuel sulfur content from the LIPASTO database <xref ref-type="bibr" rid="bib1.bibx76" id="paren.61"/>. The traffic rates in the neighbourhood are estimated by normalising the mean traffic volumes per each street <xref ref-type="bibr" rid="bib1.bibx75" id="paren.62"/> with traffic counts from an online traffic-monitoring station located in the northwestern corner of the child domain (City of Helsinki, personal communication, 3 March 2018). Traffic volumes for both southward and northward traffic are measured separately.</p>
</sec>
<sec id="Ch1.S3.SS6">
  <label>3.6</label><title>Model setup</title>
      <p id="d1e2890">The length of the morning simulations on 9 June and 12 December is 2 h, and only 1 h for the evening simulation on 9 June. Simulation times correspond to the observation periods.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><?xmltex \currentcnt{4}?><label>Table 4</label><caption><p id="d1e2896">Simulation abbreviations. WD is the wind direction and PSD is the aerosol particle number size distribution.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Simulation</oasis:entry>
         <oasis:entry colname="col2">Background meteorology</oasis:entry>
         <oasis:entry colname="col3">Background PSD</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Modelled by MEPS</oasis:entry>
         <oasis:entry colname="col3">Modelled by ADCHEM</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M179" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Observed at Kivenlahti</oasis:entry>
         <oasis:entry colname="col3">Observed at SMEAR III</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M180" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Modelled by MEPS</oasis:entry>
         <oasis:entry colname="col3">Observed at SMEAR III</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M181" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Modelled but WD from Kivenlahti</oasis:entry>
         <oasis:entry colname="col3">Observed at SMEAR III</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M182" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Modelled but WD from SMEAR III</oasis:entry>
         <oasis:entry colname="col3">Observed at SMEAR III</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e3068">For all simulation times, two simulations using either modelled (M) or observed (O) boundary conditions for the flow and background aerosol particle number size distribution (PSD) are conducted. The first setup, hereafter <inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, applies the modelled meteorological (MET) boundary conditions from the MEPS data and the modelled PSD from the ADCHEM model. The second setup, hereafter <inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">METO</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, applies the observed meteorological data from the Kivenlahti mast and the observed PSD from SMEAR III. Furthermore, two types of sensitivity tests are conducted for the summer morning. Firstly, model sensitivity on the background PSD is studied by running a simulation with the modelled meteorological boundary conditions and observed background PSD (<inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>). Secondly, the influence of WD on pollutant dispersion is investigated by replacing WD in the MEPS data by WD measured on the Kivenlahti mast (<inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) or at the SMEAR III station (<inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>). As WD<inline-formula><mml:math id="M188" display="inline"><mml:msub><mml:mi/><mml:mrow><mml:mi mathvariant="normal">SMEAR</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi mathvariant="normal">III</mml:mi></mml:mrow></mml:msub></mml:math></inline-formula> is only measured at <inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">31</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M190" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>, the wind direction at the model boundaries in <inline-formula><mml:math id="M191" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is set constant with height. In total, nine different simulations have been conducted.</p>
      <p id="d1e3216">The aerosol and chemistry modules are run only within the child domain to limit computational costs. In all simulations, the aerosol processes of condensation and dissolutional growth, coagulation, dry deposition and sedimentation are included and calculated every 1.0 <inline-formula><mml:math id="M192" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">s</mml:mi></mml:mrow></mml:math></inline-formula>. The aerosol particle size distribution is described by 10 size bins, of which three are within the first subrange (2.5–15 <inline-formula><mml:math id="M193" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula>) and seven within the second subrange (15 <inline-formula><mml:math id="M194" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula>–1 <inline-formula><mml:math id="M195" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>). Aerosol particles are assumed to be internally mixed and hygroscopic, and can contain <inline-formula><mml:math id="M196" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M197" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OC</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M198" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BC</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M199" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and/or <inline-formula><mml:math id="M200" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. The chemical reactions are calculated at every time step of the PALM model.</p>
      <p id="d1e3308">The advection of both momentum variables and scalars is based on the fifth-order advection scheme by <xref ref-type="bibr" rid="bib1.bibx79" id="text.63"/> together with a third-order Runge–Kutta time-stepping scheme <xref ref-type="bibr" rid="bib1.bibx80" id="paren.64"/>. The pressure term in the prognostic equations for momentum is calculated using the iterative multigrid scheme <xref ref-type="bibr" rid="bib1.bibx23" id="paren.65"/>. The roughness height is <inline-formula><mml:math id="M201" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M202" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx48" id="paren.66"/> and the drag coefficient applied for the trees is <inline-formula><mml:math id="M203" display="inline"><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mtext>D</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e3362">Simulations were first run only for the root domain for 1 <inline-formula><mml:math id="M204" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula>, called the precursor run here, after which the final simulations were started. The final simulations including also the nested parent and child domains were initialised using the final state of the precursor run. Offline nesting is used as forcing for the root domain and the parent and child are nested within using one-way self nesting. As SALSA and chemistry are run only within the child domain, for them the nesting is not applied and the boundary conditions of air pollutants are set at the child boundaries.
The data output was collected starting after the first 15 min of the final simulation. Simulations were performed on the Centre for Scientific Computing (CSC) Puhti supercluster. Using in total 394 Intel Xeon processor cores, each simulation required 39–80 <inline-formula><mml:math id="M205" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula> of computing time.</p>
</sec>
</sec>
<?pagebreak page5670?><sec id="Ch1.S4">
  <label>4</label><title>Comparison of the modelled and observed boundary conditions</title>
      <p id="d1e3390">The summer morning of 9 June is characterised by very calm northerly–northwesterly winds with the horizontal wind speed <inline-formula><mml:math id="M206" display="inline"><mml:mrow><mml:mi>U</mml:mi><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:mrow></mml:math></inline-formula> at <inline-formula><mml:math id="M207" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M208" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> and mainly <inline-formula><mml:math id="M209" display="inline"><mml:mrow><mml:mi>U</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">2.5</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:mrow></mml:math></inline-formula> within the lowest <inline-formula><mml:math id="M210" display="inline"><mml:mn mathvariant="normal">200</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M211" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> on the Kivenlahti mast (Fig. <xref ref-type="fig" rid="Ch1.F2"/>a–b). The MEPS data show  more westerly winds, with <inline-formula><mml:math id="M212" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">90</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>&lt;</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>&lt;</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">45</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> compared to the Kivenlahti observations, except at 09:00 LT when the modelled and observed WDs agree. Furthermore, the observed <inline-formula><mml:math id="M213" display="inline"><mml:mi>U</mml:mi></mml:math></inline-formula> values are up to <inline-formula><mml:math id="M214" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.5</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:mrow></mml:math></inline-formula> lower within the lowest <inline-formula><mml:math id="M215" display="inline"><mml:mn mathvariant="normal">100</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M216" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> during the first 2 h and up to <inline-formula><mml:math id="M217" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.0</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:mrow></mml:math></inline-formula> higher during the last 2 h when compared to the MEPS data. As the highest measurement level for <inline-formula><mml:math id="M218" display="inline"><mml:mi>U</mml:mi></mml:math></inline-formula> on the Kivenlahti mast is <inline-formula><mml:math id="M219" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">217</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M220" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>, the interpolated profile used as the boundary condition in <inline-formula><mml:math id="M221" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> underestimates <inline-formula><mml:math id="M222" display="inline"><mml:mi>U</mml:mi></mml:math></inline-formula> above <inline-formula><mml:math id="M223" display="inline"><mml:mn mathvariant="normal">217</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M224" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> at 07:00 LT. The observed and modelled profiles of air (<inline-formula><mml:math id="M225" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>) and dew-point temperature (<inline-formula><mml:math id="M226" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>D</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) correspond qualitatively well (Figs. <xref ref-type="fig" rid="Ch1.F2"/>c and S5 in the Supplement), but the observations show lower (higher) values of <inline-formula><mml:math id="M227" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> (<inline-formula><mml:math id="M228" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>D</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) than MEPS above <inline-formula><mml:math id="M229" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M230" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>, especially at 08:00–09:00 LT. MEPS also predicts a stronger and shallower surface temperature inversion, which would lead to weaker vertical mixing. Observations at SMEAR III generally follow those on the Kivenlahti mast, except that <inline-formula><mml:math id="M231" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> is roughly <inline-formula><mml:math id="M232" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> higher at SMEAR III compared to the Kivenlahti mast and WD typically falls between the MEPS data and Kivenlahti observations. The difference in WD can be explained by flow distortion at SMEAR III due to the adjacent buildings to the north of the measurement site <xref ref-type="bibr" rid="bib1.bibx57" id="paren.67"/>. The observed background aerosol particle number concentrations at SMEAR III are around 80 % lower, and the modelled PSD shows a smaller peak diameter of <inline-formula><mml:math id="M233" display="inline"><mml:mrow><mml:mi>D</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M234" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula> instead of <inline-formula><mml:math id="M235" display="inline"><mml:mrow><mml:mi>D</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">50</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M236" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula> in the SMEAR III observations (Fig. S6). Furthermore, the observations show a secondary peak at <inline-formula><mml:math id="M237" display="inline"><mml:mrow><mml:mi>D</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">14</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M238" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula>, which is not captured by ADCHEM.</p>
      <p id="d1e3793">By the evening, the observed <inline-formula><mml:math id="M239" display="inline"><mml:mi>U</mml:mi></mml:math></inline-formula> on the Kivenlahti mast had increased to 2.0–2.5 <inline-formula><mml:math id="M240" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> at <inline-formula><mml:math id="M241" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M242" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> (Fig. S7a) and the wind turned to the southwest (Fig. S7b). The modelled and observed WD agree well (<inline-formula><mml:math id="M243" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>), whereas clear discrepancy is shown for <inline-formula><mml:math id="M244" display="inline"><mml:mi>U</mml:mi></mml:math></inline-formula>. The MEPS predicts a low-level jet with the maximum <inline-formula><mml:math id="M245" display="inline"><mml:mi>U</mml:mi></mml:math></inline-formula> at <inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M247" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> and shows up to <inline-formula><mml:math id="M248" display="inline"><mml:mrow><mml:mn mathvariant="normal">3</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:mrow></mml:math></inline-formula> higher values compared to the Kivenlahti observations at 08:00–09:00 LT. This low-level jet results in a strong wind shear and mechanical turbulence production. Instead, above, <inline-formula><mml:math id="M249" display="inline"><mml:mi>U</mml:mi></mml:math></inline-formula> is overestimated in the interpolated Kivenlahti data at 21:00–22:00 LT. The profiles of <inline-formula><mml:math id="M250" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>D</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> agree relatively well (Fig. S8), whereas MEPS predicts clearly lower <inline-formula><mml:math id="M251" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, with a difference up to <inline-formula><mml:math id="M252" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> close to the ground (Fig. S7c). The SMEAR III observations agree with those from the Kivenlahti mast. The modelled and observed background PSD agree in shape, but the peak is observed at <inline-formula><mml:math id="M253" display="inline"><mml:mrow><mml:mi>D</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">70</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M254" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula> compared to <inline-formula><mml:math id="M255" display="inline"><mml:mrow><mml:mi>D</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">87</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M256" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula> in ADCHEM and observed total number concentration is around 35 % lower (Fig. S9).</p>
      <p id="d1e3999">During the winter morning of 7 December, easterly flow was observed and the wind was turning to southeast with both height and time (Fig. S10a–b). Winds were stronger than in the summer morning, around <inline-formula><mml:math id="M257" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:mrow></mml:math></inline-formula> at <inline-formula><mml:math id="M258" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M259" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>. The observed and modelled WD agree, but MEPS predicts up to <inline-formula><mml:math id="M260" display="inline"><mml:mrow><mml:mn mathvariant="normal">3</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:mrow></mml:math></inline-formula> lower <inline-formula><mml:math id="M261" display="inline"><mml:mi>U</mml:mi></mml:math></inline-formula> above the canopy. An inversion layer above the ground is captured both in MEPS and observations (Fig. S10c), yet it is stronger in the observations especially during the first hours. In contrast to <inline-formula><mml:math id="M262" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, MEPS predicts down to <inline-formula><mml:math id="M263" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> lower <inline-formula><mml:math id="M264" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>D</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> compared to the Kivenlahti observations at 09:00 LT (Fig. S11). Similar to the summer morning, the observations on the Kivenlahti mast and SMEAR III are in agreement. Both the modelled and observed PSDs peak at <inline-formula><mml:math id="M265" display="inline"><mml:mrow><mml:mi>D</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M266" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula>, but the observed total number concentrations is around 60 % higher (Fig. S12).</p>
</sec>
<sec id="Ch1.S5">
  <label>5</label><title>Evaluation of the air quality modelling results</title>
      <p id="d1e4137">The model is evaluated against observations at the three different observations periods, and in both summer and winter mornings the evaluation is done separately for both modelling hours.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T5" specific-use="star"><?xmltex \currentcnt{5}?><label>Table 5</label><caption><p id="d1e4143">The performance measures and acceptance criteria applied in the evaluation: fractional bias (FB), normalised mean squared error (NMSE), factor of 2 (FAC2), normalised mean bias factor (NMBF) and normalised mean absolute error factor (NMAEF). For more details on the acceptance criteria, see <xref ref-type="bibr" rid="bib1.bibx24" id="text.68"/> and <xref ref-type="bibr" rid="bib1.bibx84" id="text.69"/>.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="2.5cm"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="2cm"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="3cm"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="3cm"/>
     <oasis:colspec colnum="5" colname="col5" align="justify" colwidth="3cm"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">|FB|</oasis:entry>
         <oasis:entry colname="col2">NMSE</oasis:entry>
         <oasis:entry colname="col3">FAC2</oasis:entry>
         <oasis:entry colname="col4">|NMBF|</oasis:entry>
         <oasis:entry colname="col5">NMAEF</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M269" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:msup><mml:mn mathvariant="normal">0.67</mml:mn><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M270" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:msup><mml:mn mathvariant="normal">6</mml:mn><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M271" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:msup><mml:mn mathvariant="normal">0.3</mml:mn><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M272" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:msup><mml:mn mathvariant="normal">0.25</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M273" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:msup><mml:mn mathvariant="normal">0.35</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">The model under- <?xmltex \hack{\hfill\break}?>or overestimates,<?xmltex \hack{\hfill\break}?>respectively, by a<?xmltex \hack{\hfill\break}?>factor of <inline-formula><mml:math id="M274" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Random scatter<?xmltex \hack{\hfill\break}?>is <inline-formula><mml:math id="M275" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">2.4</mml:mn></mml:mrow></mml:math></inline-formula> times<?xmltex \hack{\hfill\break}?>the mean</oasis:entry>
         <oasis:entry colname="col3">Fraction of modelled<?xmltex \hack{\hfill\break}?>values within the factor<?xmltex \hack{\hfill\break}?>of 2 of the observed<?xmltex \hack{\hfill\break}?>is more than 30 %</oasis:entry>
         <oasis:entry colname="col4">The model over-<?xmltex \hack{\hfill\break}?>or underestimates<?xmltex \hack{\hfill\break}?>by a factor of <inline-formula><mml:math id="M276" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1.25</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">The absolute gross<?xmltex \hack{\hfill\break}?>error is <inline-formula><mml:math id="M277" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.35</mml:mn><mml:mo>×</mml:mo></mml:mrow></mml:math></inline-formula><?xmltex \hack{\hfill\break}?>the mean observation</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e4152"><inline-formula><mml:math id="M267" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx24" id="text.70"/>. <inline-formula><mml:math id="M268" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx84" id="text.71"/>.</p></table-wrap-foot></table-wrap>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{3}?><label>Figure 3</label><caption><p id="d1e4374">Measured <bold>(a–e)</bold> and modelled <bold>(f–o)</bold> median total aerosol number concentration (<inline-formula><mml:math id="M278" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) along the Sniffer route for the summer morning (<bold>a, f, k</bold> for the first and <bold>b, g, l</bold> for the second hour), summer evening <bold>(c, h, m)</bold> and winter morning (<bold>d, i, n</bold> for the first and <bold>e, j, o</bold> for the second hour). The second row shows <inline-formula><mml:math id="M279" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and the third <inline-formula><mml:math id="M280" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. Measurements are from <inline-formula><mml:math id="M281" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2.4</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M282" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> and modelled values from <inline-formula><mml:math id="M283" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2.5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M284" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>. The supersite is marked with a black circle.</p></caption>
        <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020-f03.png"/>

      </fig>

<sec id="Ch1.S5.SS1">
  <label>5.1</label><title>Performance measures</title>
      <p id="d1e4497">The following performance measures are applied in the evaluation: fractional bias (FB), normalised mean squared error (NMSE), factor of 2 (FAC2) <xref ref-type="bibr" rid="bib1.bibx13" id="paren.72"/>, normalised mean bias factor (NMBF) and normalised mean absolute error factor (NMAEF) <xref ref-type="bibr" rid="bib1.bibx84" id="paren.73"/>. See Table <xref ref-type="table" rid="Ch1.T5"/> for the acceptance criteria and Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/> for the equations. In short, FB and NMBF measure systematic error (i.e. bias), NMSE and NMAEF both systematic and random errors, and FAC2 the correct concentration scales. Additionally, the<?pagebreak page5671?> statistical significance of the model error (i.e. the absolute difference between the observations and modelled values) is estimated with a Student's <inline-formula><mml:math id="M285" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> test for the horizontal distributions of <inline-formula><mml:math id="M286" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S5.SS2">
  <label>5.2</label><title>Horizontal distribution of total aerosol particle number concentration</title>
      <p id="d1e4537">In order to compare the data, both the mobile Sniffer measurements containing its geographical coordinates and the PALM data output have been horizontally aggregated to a <inline-formula><mml:math id="M287" display="inline"><mml:mrow><mml:mn mathvariant="normal">5</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow><mml:mo>×</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> grid, with a threshold of at least three measurement points per grid to calculate the median value. A comparison between the measured and modelled median total aerosol particle number concentration (<inline-formula><mml:math id="M288" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) values is illustrated in Fig. <xref ref-type="fig" rid="Ch1.F3"/>. In general, the model captures the large concentration gradient between the main street (in the middle from northwest to southeast) and the side street on the northeast side of the main street. However, the model overestimates <inline-formula><mml:math id="M289" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> at the northwestern end of the Sniffer route at all simulation times, which is likely due to overestimation of the traffic emissions at an adjacent cross section. <inline-formula><mml:math id="M290" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is well modelled also along the side street, except during the winter morning in <inline-formula><mml:math id="M291" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F3"/>d–e and i–j), when the model slightly underestimates <inline-formula><mml:math id="M292" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The performance measures in simulating the horizontal distribution of <inline-formula><mml:math id="M293" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and whether the acceptance criteria are fulfilled are shown in Fig. <xref ref-type="fig" rid="Ch1.F4"/> for all simulation times. Overall, FB, NMSE and FAC2 show mostly<?pagebreak page5672?> acceptable model performance. However, NMBF often exceeds the acceptance criteria, showing that the model tends to over- or underestimate the observations by 25 % or more. NMAEF never fulfills the criteria, indicating that the absolute gross error between the observed and modelled values is always over 35 % larger than the mean observation.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><?xmltex \currentcnt{4}?><label>Figure 4</label><caption><p id="d1e4640">Model performance for the horizontal distribution of <inline-formula><mml:math id="M294" display="inline"><mml:mrow><mml:mi>N</mml:mi><mml:msub><mml:mi/><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> using the FB, NMSE, FAC2, NMBF and NMAEF performance measures. The grey area indicates that the value exceeds the acceptance criteria given in Table <xref ref-type="table" rid="Ch1.T5"/>.  See Table <xref ref-type="table" rid="Ch1.T4"/> for the simulation names. Note that during the summer evening and winter morning, only two simulations have been conducted.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020-f04.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><?xmltex \currentcnt{5}?><label>Figure 5</label><caption><p id="d1e4667">The vertical profile of the mean turbulent kinetic energy (TKE) over the entire child domain for the <bold>(a)</bold> summer morning, <bold>(b)</bold> summer evening and <bold>(c)</bold> winter morning simulation. Each profile is temporally averaged over the whole simulation.</p></caption>
          <?xmltex \igopts{width=170.716535pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020-f05.png"/>

        </fig>

      <p id="d1e4686">During the first hour in the summer morning, <inline-formula><mml:math id="M295" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> performs better than <inline-formula><mml:math id="M296" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> with respect to all performance measures. <inline-formula><mml:math id="M297" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> clearly overestimates <inline-formula><mml:math id="M298" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> along the main street (Fig. <xref ref-type="fig" rid="Ch1.F3"/>k) despite a stronger temperature inversion in the MEPS model data (<inline-formula><mml:math id="M299" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) compared to the Kivenlahti (<inline-formula><mml:math id="M300" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) observations (Fig. <xref ref-type="fig" rid="Ch1.F2"/>c). This likely stems from the underestimation of the wind speeds above <inline-formula><mml:math id="M301" display="inline"><mml:mn mathvariant="normal">217</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M302" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> in <inline-formula><mml:math id="M303" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F2"/>a), which would lead to lower mechanical turbulence production and to lower mean turbulent kinetic energy (TKE) in <inline-formula><mml:math id="M304" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F5"/>a). During the second hour, no large differences in <inline-formula><mml:math id="M305" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are observed, as the wind speed and direction of the input data become more equal.</p>
      <p id="d1e4848">Instead in the summer evening, <inline-formula><mml:math id="M306" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> performs slightly better than <inline-formula><mml:math id="M307" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (e.g. <inline-formula><mml:math id="M308" display="inline"><mml:mrow><mml:mi mathvariant="normal">FAC</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.75</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M309" display="inline"><mml:mrow><mml:mi mathvariant="normal">FAC</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.67</mml:mn></mml:mrow></mml:math></inline-formula>, respectively), but both acquire good performance values and even NMBF is within the acceptance criteria. This is surprising considering the clearly stronger winds in MEPS at <inline-formula><mml:math id="M310" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M311" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> than what is observed on the Kivenlahti mast. Yet, MEPS predicts a more stable stratification, which leads to nearly equal TKE values (Fig. <xref ref-type="fig" rid="Ch1.F5"/>b). This can justify why the difference in the spatial variability of aerosol particle concentrations between <inline-formula><mml:math id="M312" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M313" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is not that large.</p>
      <?pagebreak page5673?><p id="d1e4966">During the winter morning, <inline-formula><mml:math id="M314" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> fulfills the acceptance criteria during the first hour, except for NMAEF, and performs better than <inline-formula><mml:math id="M315" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. However, during the second hour, the difference is small. Interestingly, FAC2 is higher for <inline-formula><mml:math id="M316" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> than <inline-formula><mml:math id="M317" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> over the whole simulation. Contrary to the summer evening, MEPS predicts clearly lower wind speeds in the winter morning, which would lead to weaker mixing, but at the same time the observed temperature inversion on the Kivenlahti mast is stronger than the modelled by MEPS especially during the first hours. Hence, the stronger stability and suppression of turbulence (Fig. <xref ref-type="fig" rid="Ch1.F5"/>c) can explain the higher concentrations in <inline-formula><mml:math id="M318" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. However, it should be noted that for the first hour the differences in the model absolute error between <inline-formula><mml:math id="M319" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M320" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are not significant, and for the second hour a Student's <inline-formula><mml:math id="M321" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> test cannot be performed (see Table S2 in the Supplement).</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F6" specific-use="star"><?xmltex \currentcnt{6}?><label>Figure 6</label><caption><p id="d1e5093">Measured (marker with error bar) and modelled (black line and grey-shaded area) LDSA of aerosol particles at the supersite for the summer morning (<bold>a, f</bold> for the first and <bold>b, g</bold> for the second hour), summer evening <bold>(c, h)</bold> and winter morning (<bold>d, i</bold> for the first and <bold>e, j</bold> for the second hour). The first row shows <inline-formula><mml:math id="M322" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and the second <inline-formula><mml:math id="M323" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The figure shows the geometric mean (measured: marker; modelled: solid line) and geometric standard deviation (measured: error bar; modelled: shaded area). Dashed lines show the geometric mean at the urban background monitoring sites in Kallio and SMEAR III.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020-f06.png"/>

        </fig>

      <?xmltex \floatpos{p}?><fig id="Ch1.F7" specific-use="star"><?xmltex \currentcnt{7}?><label>Figure 7</label><caption><p id="d1e5152">Measured (marker with error bar) and modelled (black line and grey-shaded area) LDSA of aerosol particles opposite the supersite for the summer morning (<bold>a, f</bold> for the first and <bold>b, g</bold> for the second hour), summer evening <bold>(c, h)</bold> and winter morning (<bold>d, i</bold> for the first and <bold>e, j</bold> for the second hour). The first row shows <inline-formula><mml:math id="M324" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and the second <inline-formula><mml:math id="M325" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The figure shows the geometric mean (measured: marker; modelled: solid line) and geometric standard deviation (measured: error bar; modelled: shaded area). Dashed lines show the geometric mean at the urban background monitoring sites in Kallio and SMEAR III.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020-f07.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8"><?xmltex \currentcnt{8}?><label>Figure 8</label><caption><p id="d1e5212">Model performance for the vertical distribution of LDSA at the supersite. The grey area indicates that the value exceeds the acceptance criteria given in Table <xref ref-type="table" rid="Ch1.T5"/>. See Fig. <xref ref-type="fig" rid="Ch1.F4"/> for details.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020-f08.png"/>

        </fig>

</sec>
<sec id="Ch1.S5.SS3">
  <label>5.3</label><title>Vertical profile of the lung-deposited surface area</title>
      <p id="d1e5233">The modelled vertical profile of alveolar LDSA is evaluated against the observed one over a <inline-formula><mml:math id="M326" display="inline"><mml:mrow><mml:mn mathvariant="normal">5</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow><mml:mo>×</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> area next to the supersite on the northern side of the container (Fig. <xref ref-type="fig" rid="Ch1.F6"/>) and opposite the supersite on the other side of the main street (Fig. <xref ref-type="fig" rid="Ch1.F7"/>). In the summer morning, <inline-formula><mml:math id="M327" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> performs well opposite the supersite (Figs. <xref ref-type="fig" rid="Ch1.F7"/>a–b and <xref ref-type="fig" rid="Ch1.F9"/>) especially during the first hour, but it clearly overestimates LDSA at the supersite (Figs. <xref ref-type="fig" rid="Ch1.F6"/>a–b and <xref ref-type="fig" rid="Ch1.F8"/>). On the contrary, <inline-formula><mml:math id="M328" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> successfully reproduces the LDSA profile at the supersite (Fig. <xref ref-type="fig" rid="Ch1.F6"/>f–g) but not opposite it (Fig. <xref ref-type="fig" rid="Ch1.F7"/>f–g). This can be explained by the wind direction: according to the meteorological boundary condition analysis in Sect. <xref ref-type="sec" rid="Ch1.S4"/>, the wind direction predicted by MEPS is more westerly than the one observed at Kivenlahti. Therefore, a canyon vortex forming in the main street canyon pushes pollutants upwind to the western side of the street in <inline-formula><mml:math id="M329" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. On the other hand, the opposite is observed for <inline-formula><mml:math id="M330" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> for which the wind direction is more from the north. In the summer evening, <inline-formula><mml:math id="M331" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> fulfills all acceptance criteria, while <inline-formula><mml:math id="M332" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> overestimates LDSA on both sides of the street canyon. This is contradictory to the horizontal distribution of <inline-formula><mml:math id="M333" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, based on which <inline-formula><mml:math id="M334" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> showed better performance. In the winter morning, <inline-formula><mml:math id="M335" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> shows slightly better performance at the supersite, whereas <inline-formula><mml:math id="M336" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> underestimates LDSA, but it also has a lower background concentration. Instead, opposite the supersite, <inline-formula><mml:math id="M337" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> clearly overestimates LDSA below the building height. For the summer evening and winter morning, the differences in the shape of the vertical LDSA profiles are not as notable as in the summer morning, which can be explained by the good correspondence of the Kivenlahti wind direction observations to the MEPS data.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9"><?xmltex \currentcnt{9}?><label>Figure 9</label><caption><p id="d1e5450">Model performance for the vertical distribution of LDSA opposite the supersite. The grey area indicates that the value exceeds the acceptance criteria given in Table <xref ref-type="table" rid="Ch1.T5"/>. See Fig. <xref ref-type="fig" rid="Ch1.F4"/> for details.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020-f09.png"/>

        </fig>

</sec>
<sec id="Ch1.S5.SS4">
  <label>5.4</label><title>Aerosol size distribution</title>
      <p id="d1e5471">Figure <xref ref-type="fig" rid="Ch1.F10"/> illustrates the observed and modelled PSD for <inline-formula><mml:math id="M338" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> separately along the main and side streets, at the supersite and opposite it, and in the background during the first hour of the summer morning on 9 June. In addition to the Sniffer measurements with EEPS and ELPI, the modelled values are compared against differential mobility particle sizer (DMPS) measurements at the supersite and SMEAR III. The model successfully reproduces PSD along the main street and specifically at the supersite, for which FB, NMSE and FAC2 are within the acceptance criteria (see Table S3 in the Supplement). Also in the background, the Sniffer measurements agree with the model based on FB, NMSE and FAC2 even though the concentration of the smallest (the mean bin diameter <inline-formula><mml:math id="M339" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">mid</mml:mi></mml:msub><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">25</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M340" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula>) aerosol particles is underestimated. Instead, along the side street, the modelled values are clearly lower than the observed and, for instance, based on NMBF the model underestimates the EEPS and ELPI observations by a factor of 3.45 and 5.48, respectively.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10"><?xmltex \currentcnt{10}?><label>Figure 10</label><caption><p id="d1e5517">The mean aerosol number size distribution <inline-formula><mml:math id="M341" display="inline"><mml:mrow><mml:mtext>d</mml:mtext><mml:mi>N</mml:mi><mml:mo>/</mml:mo><mml:mtext>d</mml:mtext><mml:mi>log⁡</mml:mi><mml:mi>D</mml:mi></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M342" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) at different parts of the domain at <inline-formula><mml:math id="M343" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M344" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math id="M345" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> on the morning of 9 June  at 07:16–08:14 LT. Modelled values are shown with a solid black  line and Sniffer measurements with green lines: solid with filled squares for EEPS and dotted with empty squares for ELPI. Stationary DMPS measurements are shown with a solid light-green  line with circles (SS indicates a supersite) and dotted  pink line (SMEAR III). Note that for this observation period no stationary Sniffer measurements are available opposite the supersite.</p></caption>
          <?xmltex \igopts{width=204.859843pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020-f10.png"/>

        </fig>

      <p id="d1e5594">Comparing the two simulations with different boundary conditions, <inline-formula><mml:math id="M346" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> performs better along the main street and hence also at the supersite and opposite it during the first hour of the summer morning (Tables S3 and S4). However, during the second hour, the difference between <inline-formula><mml:math id="M347" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M348" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is minor, which was also observed for the horizontal distribution of <inline-formula><mml:math id="M349" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. <inline-formula><mml:math id="M350" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, which uses the observed background PSD as boundary conditions, performs better along the side street and in the background. This is also observed in the summer evening (Tables S8 and S9) and winter morning (Tables S10 and S11). In the summer evening, both <inline-formula><mml:math id="M351" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M352" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> perform equally well along the main street and equally poorly at the supersite overestimating the EEPS measurements by a factor of 3.68–4.36 based on NMBF (Tables S8 and S9). In the winter morning, <inline-formula><mml:math id="M353" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> produces better results than <inline-formula><mml:math id="M354" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> along the main street. Instead, at the supersite, both <inline-formula><mml:math id="M355" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M356" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> perform equally well and fulfill the acceptance criteria for FB, NMSE and FAC2 (Tables S10 and S11).</p>

<table-wrap id="Ch1.T6" specific-use="star"><?xmltex \currentcnt{6}?><label>Table 6</label><caption><p id="d1e5772">Performance of the modelled aerosol chemical composition at the supersite on the morning of 9 June  between 07:16 and 09:15 LT. See Fig. <xref ref-type="fig" rid="Ch1.F4"/> for further description.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:colspec colnum="7" colname="col7" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Simulation name</oasis:entry>
         <oasis:entry colname="col2">Variable</oasis:entry>
         <oasis:entry colname="col3">FB</oasis:entry>
         <oasis:entry colname="col4">NMSE</oasis:entry>
         <oasis:entry colname="col5">FAC2</oasis:entry>
         <oasis:entry colname="col6">NMBF</oasis:entry>
         <oasis:entry colname="col7">NMAEF</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M357" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M358" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.73</oasis:entry>
         <oasis:entry colname="col4">1.65</oasis:entry>
         <oasis:entry colname="col5">0.50</oasis:entry>
         <oasis:entry colname="col6">1.60</oasis:entry>
         <oasis:entry colname="col7">1.60</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M359" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OC</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.42</oasis:entry>
         <oasis:entry colname="col4">0.75</oasis:entry>
         <oasis:entry colname="col5">0.50</oasis:entry>
         <oasis:entry colname="col6">0.75</oasis:entry>
         <oasis:entry colname="col7">0.97</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M360" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.15</oasis:entry>
         <oasis:entry colname="col4">0.04</oasis:entry>
         <oasis:entry colname="col5">1.00</oasis:entry>
         <oasis:entry colname="col6">0.16</oasis:entry>
         <oasis:entry colname="col7">0.16</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M361" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">1.60</oasis:entry>
         <oasis:entry colname="col4">26.44</oasis:entry>
         <oasis:entry colname="col5">0.00</oasis:entry>
         <oasis:entry colname="col6">18.05</oasis:entry>
         <oasis:entry colname="col7">18.05</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M362" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BC</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">1.39</oasis:entry>
         <oasis:entry colname="col4">15.07</oasis:entry>
         <oasis:entry colname="col5">0.00</oasis:entry>
         <oasis:entry colname="col6">10.02</oasis:entry>
         <oasis:entry colname="col7">10.02</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M363" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PM</mml:mi><mml:mn mathvariant="normal">2.5</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">1.20</oasis:entry>
         <oasis:entry colname="col4">6.65</oasis:entry>
         <oasis:entry colname="col5">0.33</oasis:entry>
         <oasis:entry colname="col6">5.10</oasis:entry>
         <oasis:entry colname="col7">5.10</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M364" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M365" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.42</oasis:entry>
         <oasis:entry colname="col4">0.26</oasis:entry>
         <oasis:entry colname="col5">1.00</oasis:entry>
         <oasis:entry colname="col6">0.54</oasis:entry>
         <oasis:entry colname="col7">0.58</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M366" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OC</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.13</oasis:entry>
         <oasis:entry colname="col4">0.06</oasis:entry>
         <oasis:entry colname="col5">1.00</oasis:entry>
         <oasis:entry colname="col6">0.14</oasis:entry>
         <oasis:entry colname="col7">0.21</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M367" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.27</oasis:entry>
         <oasis:entry colname="col4">0.12</oasis:entry>
         <oasis:entry colname="col5">1.00</oasis:entry>
         <oasis:entry colname="col6">0.33</oasis:entry>
         <oasis:entry colname="col7">0.33</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M368" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">1.06</oasis:entry>
         <oasis:entry colname="col4">4.02</oasis:entry>
         <oasis:entry colname="col5">0.00</oasis:entry>
         <oasis:entry colname="col6">3.02</oasis:entry>
         <oasis:entry colname="col7">3.02</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M369" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BC</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.50</oasis:entry>
         <oasis:entry colname="col4">1.69</oasis:entry>
         <oasis:entry colname="col5">0.50</oasis:entry>
         <oasis:entry colname="col6">1.09</oasis:entry>
         <oasis:entry colname="col7">1.28</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M370" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PM</mml:mi><mml:mn mathvariant="normal">2.5</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.69</oasis:entry>
         <oasis:entry colname="col4">0.86</oasis:entry>
         <oasis:entry colname="col5">0.50</oasis:entry>
         <oasis:entry colname="col6">1.15</oasis:entry>
         <oasis:entry colname="col7">1.15</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S5.SS5">
  <label>5.5</label><title>Aerosol chemical composition</title>
      <?pagebreak page5675?><p id="d1e6264">The chemical composition of aerosols was measured at the supersite by an ACSM (aerosol chemical speciation monitor) and the black carbon (<inline-formula><mml:math id="M371" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BC</mml:mi></mml:mrow></mml:math></inline-formula>) concentration by a MAAP (multi-angle absorption photometer; see Table S1 in the Supplement). Additionally, the Sniffer measured <inline-formula><mml:math id="M372" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BC</mml:mi></mml:mrow></mml:math></inline-formula> within <inline-formula><mml:math id="M373" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PM</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. In general, the modelled and observed horizontal distributions of <inline-formula><mml:math id="M374" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BC</mml:mi></mml:mrow></mml:math></inline-formula> compare tolerably well based on the performance measures FB, NMSE and FAC2, while NMBF and NMAEF are not within the acceptance criteria (see Fig. S13 in the Supplement). Overall, the performance is best for <inline-formula><mml:math id="M375" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the summer morning during the first hour. In the summer and winter mornings, <inline-formula><mml:math id="M376" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> suffers from high positive bias and absolute error and <inline-formula><mml:math id="M377" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the winter morning from high absolute error. Instead, in the summer evening, both simulations show NMSE and FAC2 within the acceptance criteria but still overestimate <inline-formula><mml:math id="M378" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BC</mml:mi></mml:mrow></mml:math></inline-formula>. Comparison to the measured chemical composition of aerosols at the supersite (Tables <xref ref-type="table" rid="Ch1.T6"/> and S12–13) shows that the modelled concentration of organic carbon (<inline-formula><mml:math id="M379" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OC</mml:mi></mml:mrow></mml:math></inline-formula>) is in general on the right order of magnitude. Furthermore, in the summer morning (Table <xref ref-type="table" rid="Ch1.T6"/>), especially the concentrations of sulfates (<inline-formula><mml:math id="M380" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>) and nitrates (<inline-formula><mml:math id="M381" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>), and also <inline-formula><mml:math id="M382" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BC</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M383" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PM</mml:mi><mml:mn mathvariant="normal">2.5</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are correctly reproduced by <inline-formula><mml:math id="M384" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, while ammonium (<inline-formula><mml:math id="M385" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>) is highly overestimated especially by <inline-formula><mml:math id="M386" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M387" display="inline"><mml:mrow><mml:mi mathvariant="normal">NMBF</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">18.05</mml:mn></mml:mrow></mml:math></inline-formula>). In the summer evening (Table S12), <inline-formula><mml:math id="M388" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> corresponds better to observations than <inline-formula><mml:math id="M389" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and correctly reproduces <inline-formula><mml:math id="M390" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M391" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OC</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M392" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PM</mml:mi><mml:mn mathvariant="normal">2.5</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, while overestimating the rest. Also in the winter morning (Table S13), <inline-formula><mml:math id="M393" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> performs slightly better than <inline-formula><mml:math id="M394" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in modelling <inline-formula><mml:math id="M395" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OC</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M396" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">PM</mml:mi><mml:mn mathvariant="normal">2.5</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> on the right order of magnitude, but <inline-formula><mml:math id="M397" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> still overestimates the mass concentrations of the other chemical components by a factor of around 2.7–6.5. Hence, the difference in the chemical composition is not systematic. Comparing modelled values with point observations in a street canyon is very sensitive to the correct wind direction because a perpendicular wind component leads to accumulation of pollutants on the leeward side of the street canyon. As the vertical dispersion of LDSA was also shown sensitive to the wind direction, the results of the performance of modelling the correct chemical composition correspond to those of the vertical dispersion of LDSA (see Sect. <xref ref-type="sec" rid="Ch1.S5.SS3"/>).</p>
</sec>
</sec>
<sec id="Ch1.S6">
  <label>6</label><title>Sensitivity analysis</title>
<sec id="Ch1.S6.SS1">
  <label>6.1</label><title>Background aerosol size distribution</title>
      <p id="d1e6626">Sensitivity of the modelled aerosol concentrations to the background PSD is investigated by applying the modelled PSD (<inline-formula><mml:math id="M398" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) from ADCHEM and the observed PSD at SMEAR III (<inline-formula><mml:math id="M399" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) as the background PSD. Regarding all variables used in the evaluation (<inline-formula><mml:math id="M400" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, LDSA, PSD<?pagebreak page5676?> and aerosol chemical composition), only minor differences are observed between <inline-formula><mml:math id="M401" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M402" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. For instance, for the horizontal distribution of <inline-formula><mml:math id="M403" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M404" display="inline"><mml:mrow><mml:mi mathvariant="normal">FB</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.02</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M405" display="inline"><mml:mrow><mml:mi mathvariant="normal">FB</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.01</mml:mn></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M406" display="inline"><mml:mrow><mml:mi mathvariant="normal">NMSE</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.17</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M407" display="inline"><mml:mrow><mml:mi mathvariant="normal">NMSE</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.15</mml:mn></mml:mrow></mml:math></inline-formula>, respectively (see Fig. <xref ref-type="fig" rid="Ch1.F4"/>). The difference in the horizontal distribution of <inline-formula><mml:math id="M408" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F11"/>b) is mainly within <inline-formula><mml:math id="M409" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula>–20 % with slightly higher (lower) concentrations in the southern (northern) part of the domain. This difference stems from roughly 80 % lower observed than modelled background <inline-formula><mml:math id="M410" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, and thus the air being advected from northwest is cleaner in <inline-formula><mml:math id="M411" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> compared to <inline-formula><mml:math id="M412" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e6835">Similar to the horizontal distribution, the vertical profile of LDSA for <inline-formula><mml:math id="M413" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> does not differ from <inline-formula><mml:math id="M414" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> within the street canyon (Fig. <xref ref-type="fig" rid="Ch1.F12"/>). Only a small decrease in model performance is observed opposite the supersite when applying the observed PSD as the boundary condition (e.g. FB is increased from 0.20 to 0.34 and NMSE from 0.07 to 0.14 during the first hour; Fig. <xref ref-type="fig" rid="Ch1.F9"/>). However, above <inline-formula><mml:math id="M415" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M416" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>, the difference gradually approaches 65 %–160 %, i.e. the relative difference in the background <inline-formula><mml:math id="M417" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> between the modelled ADCHEM values and SMEAR III observations.</p>
      <p id="d1e6906">With respect to PSD, <inline-formula><mml:math id="M418" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M419" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> perform mostly equally well or poorly, except for slightly better performance of <inline-formula><mml:math id="M420" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> on the side street. The wind speed and/or direction influence the modelled PSD more than the background PSD (see Fig. S14 in the Supplement).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11"><?xmltex \currentcnt{11}?><label>Figure 11</label><caption><p id="d1e6960">Relative difference in the total aerosol number concentration (<inline-formula><mml:math id="M421" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) at <inline-formula><mml:math id="M422" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2.5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M423" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> on the morning of 9 June between 07:16 and 09:15 LT compared to <inline-formula><mml:math id="M424" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> for <bold>(a)</bold> <inline-formula><mml:math id="M425" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <bold>(b)</bold> <inline-formula><mml:math id="M426" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <bold>(c)</bold> <inline-formula><mml:math id="M427" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <bold>(d)</bold> <inline-formula><mml:math id="M428" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The area with black crosses shows <inline-formula><mml:math id="M429" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">150</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula>. Buildings shown with white and black circles denote the locations of the supersites. Note that <inline-formula><mml:math id="M430" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is shown here for the whole simulation and not separately for each hour.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020-f11.png"/>

        </fig>

<?xmltex \hack{\newpage}?><?xmltex \floatpos{t}?><fig id="Ch1.F12"><?xmltex \currentcnt{12}?><label>Figure 12</label><caption><p id="d1e7146">Relative difference in the lung-deposited surface area (<inline-formula><mml:math id="M431" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>LDSA) of aerosol particles compared to <inline-formula><mml:math id="M432" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> at the supersite <bold>(a, c)</bold> and opposite the supersite <bold>(b, d)</bold> on the morning of 9 June. The figure shows the difference in the geometric mean for <inline-formula><mml:math id="M433" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (solid line with empty circles), <inline-formula><mml:math id="M434" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (dashed line with empty squares), <inline-formula><mml:math id="M435" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (dash–dot line with filled squares) and <inline-formula><mml:math id="M436" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (dotted line with filled squares).</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/13/5663/2020/gmd-13-5663-2020-f12.png"/>

        </fig>

</sec>
<?pagebreak page5677?><sec id="Ch1.S6.SS2">
  <label>6.2</label><title>Background meteorological conditions</title>
      <p id="d1e7267">In Sect. <xref ref-type="sec" rid="Ch1.S5"/>, the simulation using the observed data as boundary conditions (<inline-formula><mml:math id="M437" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) was shown to perform worse than when using the modelled MEPS data (<inline-formula><mml:math id="M438" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) in the summer morning. As the observed wind speed at Kivenlahti and the one modelled by MEPS differ (see Sect. <xref ref-type="sec" rid="Ch1.S4"/>), we separately investigate the model sensitivity to the incoming wind direction.</p>
      <p id="d1e7306">In general, <inline-formula><mml:math id="M439" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M440" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, for which the meteorological boundary conditions are taken from MEPS but the incoming wind direction is replaced with the one measured on the Kivenlahti mast, result in a similar pattern for the difference in the horizontal distribution of <inline-formula><mml:math id="M441" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> compared to <inline-formula><mml:math id="M442" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F11"/>a, c). However, the differences are larger for <inline-formula><mml:math id="M443" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, for which the incoming upper-level wind speed is up to 2 <inline-formula><mml:math id="M444" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> slower than in <inline-formula><mml:math id="M445" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> during the first hour (Fig. <xref ref-type="fig" rid="Ch1.F2"/>a). This results in the aerosol particles being transported more to the southwest side of the main street. As the wind is more from the north in <inline-formula><mml:math id="M446" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> than in <inline-formula><mml:math id="M447" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, also the impact of wind direction on the street-canyon vortex along the main street is observed by clearly lower (higher) <inline-formula><mml:math id="M448" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> on the southern (northern) side of the street canyon. The similar patterns of <inline-formula><mml:math id="M449" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math id="M450" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M451" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> but the higher absolute values of <inline-formula><mml:math id="M452" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math id="M453" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> indicate that the horizontal distribution is strongly controlled by the wind direction, while the absolute values depend on the wind speed. Instead, <inline-formula><mml:math id="M454" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, for which the wind direction is from SMEAR III and does not vary with height, shows clearly higher concentrations (up to <inline-formula><mml:math id="M455" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>150 %) along the main street but smaller differences in its surroundings (<inline-formula><mml:math id="M456" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula>–80 %).</p>
      <p id="d1e7599">Replacing the modelled wind direction with the one observed on the Kivenlahti mast (<inline-formula><mml:math id="M457" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) or SMEAR III (<inline-formula><mml:math id="M458" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) improves the model performance for the horizontal distribution of <inline-formula><mml:math id="M459" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> during the first summer morning hour (Fig. <xref ref-type="fig" rid="Ch1.F4"/>). However, for the second hour, <inline-formula><mml:math id="M460" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is shown to perform even worse than <inline-formula><mml:math id="M461" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> based on a lower FAC2 and higher NMBF and NMAEF. During the first hour, <inline-formula><mml:math id="M462" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> performs better than <inline-formula><mml:math id="M463" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> based on FB, NMBF and NMAEF, indicating that there is more bias in <inline-formula><mml:math id="M464" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, while during the second hour <inline-formula><mml:math id="M465" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> performs better only based on NMSE. Presumably, the wind has too much of a westerly component in <inline-formula><mml:math id="M466" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> compared to the northerly winds in the MEPS and Kivenlahti data, which results in the traffic emissions downstream being flushed along the main street.</p>
      <?pagebreak page5678?><p id="d1e7800">The observed vertical profile of LDSA at the supersite on the summer morning corresponds better to the one modelled by <inline-formula><mml:math id="M467" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M468" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> than <inline-formula><mml:math id="M469" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F8"/>). Hence, modifying the MEPS wind direction to correspond to the observed one at Kivenlahti increases the model performance. During the second hour, <inline-formula><mml:math id="M470" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> performs even slightly better than <inline-formula><mml:math id="M471" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (e.g. <inline-formula><mml:math id="M472" display="inline"><mml:mrow><mml:mi mathvariant="normal">FB</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.07</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M473" display="inline"><mml:mrow><mml:mi mathvariant="normal">FB</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.09</mml:mn></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M474" display="inline"><mml:mrow><mml:mi mathvariant="normal">NMSE</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.01</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M475" display="inline"><mml:mrow><mml:mi mathvariant="normal">NMSE</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.03</mml:mn></mml:mrow></mml:math></inline-formula>). However, applying the wind direction from SMEAR III improves the model performance only for the first hour, while during the second hour <inline-formula><mml:math id="M476" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> performs the worst. Whereas <inline-formula><mml:math id="M477" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> results in lower (higher) LDSA than <inline-formula><mml:math id="M478" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> below (above) <inline-formula><mml:math id="M479" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">30</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M480" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M481" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> shows higher values up to the building height (<inline-formula><mml:math id="M482" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">19</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M483" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>) during the second hour, above which it gradually starts to follow the <inline-formula><mml:math id="M484" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>LDSA for <inline-formula><mml:math id="M485" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. Opposite the supersite, up to 5-fold values compared to <inline-formula><mml:math id="M486" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are observed in <inline-formula><mml:math id="M487" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M488" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">mast</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> within the first hour (Fig. <xref ref-type="fig" rid="Ch1.F12"/>b), and the model performance is clearly decreased when using the observed wind direction from Kivenlahti (e.g. FB is increased from 0.20 to 0.47 and FAC2 decreased from 1.00 to 0.67; Fig. <xref ref-type="fig" rid="Ch1.F9"/>). Instead, <inline-formula><mml:math id="M489" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> performs better than <inline-formula><mml:math id="M490" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. Within the second hour, <inline-formula><mml:math id="M491" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>LDSA compared to <inline-formula><mml:math id="M492" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is mainly within <inline-formula><mml:math id="M493" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>50 % below the building height, but above <inline-formula><mml:math id="M494" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mrow><mml:mi mathvariant="normal">WD</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">SMEAR</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> deviates from the other profiles showing 2-fold values. All <inline-formula><mml:math id="M495" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>LDSA profiles gradually approach <inline-formula><mml:math id="M496" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula>100 %, which is a result of using different PSDs for <inline-formula><mml:math id="M497" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and for the rest of the simulations.</p>
      <p id="d1e8279">Similarly for the aerosol size distribution, changing the modelled wind direction by MEPS to the one measured at Kivenlahti improves model performance in the background and slightly decreases elsewhere during the first hour, whereas during the last hour PSD is modelled better along the side street and at the supersite (see Tables S3 and S6 in the Supplement). Applying the wind direction from SMEAR III generally does not improve model performance (Table S7). Along the main street, the difference in PSD is mainly governed by the emission, which is shown by the peak at <inline-formula><mml:math id="M498" display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mi mathvariant="normal">mid</mml:mi></mml:msub><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M499" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula> in Fig. S14 (in the Supplement), while in the background <inline-formula><mml:math id="M500" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>N</mml:mi></mml:mrow></mml:math></inline-formula> follows the difference in the boundary conditions for aerosol particles.</p>
</sec>
</sec>
<sec id="Ch1.S7">
  <label>7</label><title>Discussion and conclusions</title>
      <p id="d1e8324">This study provides an extensive evaluation of the SALSA2.0 module in the PALM model system 6.0 on simulating the horizontal distribution of aerosol particle number concentrations (<inline-formula><mml:math id="M501" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), size distributions and black carbon concentrations and the vertical distribution of surface area (LDSA) in a complex urban environment. In addition, the aerosol chemical composition in a single measurement location is examined. Simulations are conducted under three different meteorological conditions: 2 h on a summer morning, 1 h on a summer evening and 2 h on a winter morning. The study also investigates the model sensitivity to the boundary conditions of meteorological variables and background aerosol concentrations during the different times.</p>
      <p id="d1e8338">Overall, the modelled aerosol concentrations compare well against observations. Indeed, the concentration fields are strongly influenced by the applied boundary conditions for the meteorological variables, while in this study the background PSD is shown to be less important. Especially the vertical profiles of LDSA are sensitive to the wind direction as it influences the formation and direction of the canyon vortex and thus the accumulation of pollutants on the leeward side of the street canyon. This also affects the model performance regarding the aerosol chemical composition, which is measured only at one point at the supersite. In general, the chemical composition is acceptably reproduced except for <inline-formula><mml:math id="M502" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, which is highly overestimated at all times. Yet, the performance is not always systematic with the horizontal and vertical distributions. Furthermore, the horizontal distribution of <inline-formula><mml:math id="M503" display="inline"><mml:mrow><mml:mi>N</mml:mi><mml:msub><mml:mi/><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is ruled by the prevailing wind speed and atmospheric stability, both of which control the turbulent mixing and ventilation. It is speculated that the wind speed and stability counteract each other in the summer and winter mornings, so that stronger stability can suppress TKE and turbulent mixing despite high wind speeds and consequent mechanical turbulence production, and vice versa.</p>
      <p id="d1e8366">Consequently, meteorological boundary conditions are particularly important for quantitative urban air quality modelling using LES, and therefore the inlet meteorology should be evaluated prior to conducting CFD simulations <xref ref-type="bibr" rid="bib1.bibx69" id="paren.74"/>. However, in our case, we are unable to thoroughly evaluate the modelled meteorology. In <xref ref-type="bibr" rid="bib1.bibx69" id="text.75"/>, the meteorological observations were made within the simulation domain, while in our case the closest measurements at SMEAR III are 800 <inline-formula><mml:math id="M504" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> away from the supersite. Observations are available also from the Kivenlahti mast, which has several measurement levels but is located over 17 <inline-formula><mml:math id="M505" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> away from the supersite and represents more semi-urban to rural area. Another problem with the Kivenlahti data is the lack of wind observations above 217 <inline-formula><mml:math id="M506" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> in summer, which presumably leads to, for instance, underestimation of the incoming wind speed during the first simulation hour in the summer morning and around 21:00 LT in the summer evening. Consequently, neither of the observation datasets are optimal for evaluating the modelled meteorology or for providing meteorological boundary conditions for the simulations.</p>
      <p id="d1e8399">Of the aerosol metrics applied, LDSA directly estimates the health effect of aerosol exposure. The mean modelled LDSA concentration at <inline-formula><mml:math id="M507" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M508" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> varies between 27 and 360 <inline-formula><mml:math id="M509" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> at the supersite and between 20 and 250 <inline-formula><mml:math id="M510" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> opposite the supersite, with the overall lowest LDSA opposite the supersite in <inline-formula><mml:math id="M511" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the summer evening and highest at the supersite in <inline-formula><mml:math id="M512" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the summer morning. As mentioned above, the wind direction is shown as a determining factor for accumulation of pollutants near the ground. The difference in near-ground LDSA between the supersite and opposite the supersite is the most pronounced in <inline-formula><mml:math id="M513" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">MET</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">PSD</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> during the first hour of the summer morning (360 and 37 <inline-formula><mml:math id="M514" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, respectively). This large concentration gradient across the street illustrates the degree of error that can be made in the estimated outdoor-exposure level in epidemiological studies. Compared to urban background and traffic-monitoring stations <xref ref-type="bibr" rid="bib1.bibx43" id="paren.76"><named-content content-type="pre">see</named-content><named-content content-type="post">and references within</named-content></xref>, a street canyon allows for strong accumulation leading to high instantaneous concentrations.</p>
      <?pagebreak page5680?><p id="d1e8545">However, LDSA is often overestimated near the ground in our simulations. One limitation of this study and in general in urban LES is omitting vehicle-induced turbulence (VIT), which would enhance vertical pollutant transport and mixing near the surface and very likely decrease concentrations near the ground. The research to include VIT in LES without extensive computational costs is ongoing and currently no freely available VIT model exists for LES. Neglecting the thermal turbulence in the simulations is another important limitation of our study. We acknowledge that omitting the influence of anthropogenic heat and heating by incoming solar radiation leads to overestimation of the vertical stability near the ground, which can partly explain the overestimation of the modelled surface concentrations. However, the spatial variability has been shown to be less dependent on a detailed heating distribution <xref ref-type="bibr" rid="bib1.bibx55" id="paren.77"/>, and therefore the horizontal distribution is mainly determined by the predominant inflow conditions. Lastly, condensation of the biogenic volatile organic compounds on aerosol particles and their consecutive growth are not considered in PALM.
<?xmltex \hack{\clearpage}?></p>
</sec>

      
      </body>
    <back><app-group>

<app id="App1.Ch1.S1">
  <?xmltex \currentcnt{A}?><label>Appendix A</label><title>Performance measures</title>
      <p id="d1e8563">Performance measures calculated using the modelled <inline-formula><mml:math id="M515" display="inline"><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and observed <inline-formula><mml:math id="M516" display="inline"><mml:mrow><mml:msub><mml:mi>O</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> values. <inline-formula><mml:math id="M517" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> is the number of samples.
          <disp-formula id="App1.Ch1.S1.E1" content-type="numbered"><label>A1</label><mml:math id="M518" display="block"><mml:mrow><mml:mi mathvariant="normal">FB</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mi>N</mml:mi></mml:mfrac></mml:mstyle><mml:mo movablelimits="false">∑</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>O</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>(</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>O</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>

          <disp-formula id="App1.Ch1.S1.E2" content-type="numbered"><label>A2</label><mml:math id="M519" display="block"><mml:mrow><mml:mi mathvariant="normal">NMSE</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>N</mml:mi><mml:mo>∑</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>O</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∑</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>∑</mml:mo><mml:msub><mml:mi>O</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>
        FAC2 indicates the fraction of data that satisfy
          <disp-formula id="App1.Ch1.S1.E3" content-type="numbered"><label>A3</label><mml:math id="M520" display="block"><mml:mrow><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>≤</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>O</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">2.0</mml:mn><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

              <disp-formula specific-use="align" content-type="numbered"><mml:math id="M521" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="App1.Ch1.S1.E4"><mml:mtd><mml:mtext>A4</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">NMBF</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∑</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>O</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∑</mml:mo><mml:msub><mml:mi>O</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="1em"/><mml:mi mathvariant="normal">if</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mover accent="true"><mml:mi>M</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>≥</mml:mo><mml:mover accent="true"><mml:mi>O</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S1.E5"><mml:mtd><mml:mtext>A5</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∑</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>O</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∑</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo><mml:mspace width="1em" linebreak="nobreak"/><mml:mi mathvariant="normal">if</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mover accent="true"><mml:mi>M</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>&lt;</mml:mo><mml:mover accent="true"><mml:mi>O</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

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</app>
  </app-group><notes notes-type="codedataavailability"><title>Code and data availability</title>

      <p id="d1e8987">The PALM code is freely available under the GNU General Public License v3. The exact model source code (revision 4416) is available at <uri>https://doi.org/10.5281/zenodo.4005366</uri> <xref ref-type="bibr" rid="bib1.bibx37" id="paren.78"/>. MEPS model data are distributed under Norwegian license for public data (NLOD) and Creative Commons 4.0 BY International at <uri>https://thredds.met.no/thredds/catalog.html</uri> (last access: 18 February 2020) by the Norwegian Meteorological Institute.</p>

      <p id="d1e8999">All measurement data applied in the evaluation can be downloaded from <uri>https://doi.org/10.5281/zenodo.3828508</uri> <xref ref-type="bibr" rid="bib1.bibx42" id="paren.79"/> and the input and output data, performance measures and source code modifications from <uri>https://doi.org/10.5281/zenodo.3824351</uri> <xref ref-type="bibr" rid="bib1.bibx38" id="paren.80"/>. The scripts applied in the data analysis and model evaluation are freely available at <uri>https://doi.org/10.5281/zenodo.3839462</uri> <xref ref-type="bibr" rid="bib1.bibx39" id="paren.81"/>, and the files and scripts for creating the PALM input data are available at <uri>https://doi.org/10.5281/zenodo.3839684</uri> <xref ref-type="bibr" rid="bib1.bibx40" id="paren.82"/>.</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d1e9027">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/gmd-13-5663-2020-supplement" xlink:title="pdf">https://doi.org/10.5194/gmd-13-5663-2020-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e9036">LJ and MK designed the concept of the study. MK prepared and conducted the LES simulations with contributions from AH, and PR conducted the ADCHEM simulations. MK, JS and SK contributed to the pre-processing of the used input datasets. LJ, HK, TR, JN, LP and HT planned the measurement campaign, and MK, HK, SK and HT conducted parts of the measurements. AB participated in post-processing the scripts of the Sniffer data. MK wrote the manuscript with contributions from all co-authors.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e9042">The authors declare that they have no conflict of interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e9049">The authors are very grateful to Aleksi Malinen and Sami Kulovuori from the Metropolia University of Applied Sciences for technical expertise and operation of the Sniffer, and to Aeromon Oy and Helsinki Region Environmental Services Authority (HSY) for collaboration in conducting the drone measurements.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e9054">This research has been supported by the Helsinki Metropolitan Region Urban Research Program, the Academy of Finland Centre of Excellence (grant no. 307331), Business Finland, the ERA-NET-COFUND project under ERA-PLANET (grant no. 689443) and the doctoral programme in atmospheric sciences (ATM-DP).<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>Open access funding provided by Helsinki University Library.</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e9063">This paper was edited by Christoph Knote and reviewed by two anonymous referees.</p>
  </notes><ref-list>
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<abstract-html><p>High-resolution modelling is needed to understand urban air quality and pollutant dispersion in detail. Recently, the PALM model system 6.0, which is based on large-eddy simulation (LES), was extended with the detailed Sectional Aerosol module for Large Scale Applications (SALSA) v2.0 to enable studying the complex interactions between the turbulent flow field and aerosol dynamic processes. This study represents an extensive evaluation of the modelling system against the horizontal and vertical distributions of aerosol particles measured using a mobile laboratory and a drone in an urban neighbourhood in Helsinki, Finland. Specific emphasis is on the model sensitivity of aerosol particle concentrations, size distributions and chemical compositions to boundary conditions of meteorological variables and aerosol background concentrations. The meteorological boundary conditions are taken from both a numerical weather prediction model and observations, which occasionally differ strongly.
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The horizontal distribution is most sensitive to the wind speed and atmospheric stratification, and vertical distribution to the wind direction. The aerosol number size distribution is mainly governed by the flow field along the main street with high traffic rates and in its surroundings by the background concentrations. The results emphasise the importance of correct meteorological and aerosol background boundary conditions, in addition to accurate emission estimates and detailed model physics, in quantitative high-resolution air pollution modelling and future urban LES studies.</p></abstract-html>
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