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<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing with OASIS Tables v3.0 20080202//EN" "journalpub-oasis3.dtd">
<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0"><?xmltex \bartext{}?>
  <front>
    <journal-meta><journal-id journal-id-type="publisher">GMD</journal-id><journal-title-group>
    <journal-title>Geoscientific Model Development</journal-title>
    <abbrev-journal-title abbrev-type="publisher">GMD</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Geosci. Model Dev.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1991-9603</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/gmd-12-4681-2019</article-id><title-group><article-title>Modelling biomass burning emissions and the effect of spatial resolution: a case study for Africa based on the Global Fire Emissions Database (GFED)</article-title><alt-title>Modelling biomass burning emissions</alt-title>
      </title-group><?xmltex \runningtitle{Modelling biomass burning emissions}?><?xmltex \runningauthor{D. van~Wees and G.~R. van~der~Werf}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes">
          <name><surname>van Wees</surname><given-names>Dave</given-names></name>
          <email>d.van.wees@vu.nl</email>
        </contrib>
        <contrib contrib-type="author" corresp="no">
          <name><surname>van der Werf</surname><given-names>Guido R.</given-names></name>
          
        </contrib>
        <aff id="aff1"><institution>Department of Earth Sciences, Vrije Universiteit, Amsterdam, 1081 HV,
the Netherlands</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Dave van Wees (d.van.wees@vu.nl)</corresp></author-notes><pub-date><day>8</day><month>November</month><year>2019</year></pub-date>
      
      <volume>12</volume>
      <issue>11</issue>
      <fpage>4681</fpage><lpage>4703</lpage>
      <history>
        <date date-type="received"><day>29</day><month>April</month><year>2019</year></date>
           <date date-type="rev-request"><day>2</day><month>May</month><year>2019</year></date>
           <date date-type="rev-recd"><day>11</day><month>September</month><year>2019</year></date>
           <date date-type="accepted"><day>24</day><month>September</month><year>2019</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2019 Dave van Wees</copyright-statement>
        <copyright-year>2019</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019.html">This article is available from https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019.html</self-uri><self-uri xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019.pdf">The full text article is available as a PDF file from https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e87">Large-scale fire emission estimates may be influenced by
the spatial resolution of the model and input datasets used. Especially in
areas with relatively heterogeneous land cover, a coarse model resolution
might lead to substantial errors in estimates. We developed a
model using MODerate resolution Imaging Spectroradiometer (MODIS) satellite
observations of burned area and vegetation characteristics to study the
impact of spatial resolution on modelled fire emission estimates. We
estimated fire emissions for sub-Saharan Africa at 500 m spatial
resolution (native MODIS burned area) for the 2002–2017 period, using a
simplified version of the Global Fire Emissions Database (GFED) modelling
framework, and compared this to model runs at a range of coarser resolutions
(0.050, 0.125, 0.250<inline-formula><mml:math id="M1" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>). We estimated fire
emissions of 0.68 Pg C yr<inline-formula><mml:math id="M2" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> at 500 m resolution and 0.82 Pg C yr<inline-formula><mml:math id="M3" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> at 0.25<inline-formula><mml:math id="M4" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution; a difference of 24 %. At
0.25<inline-formula><mml:math id="M5" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution, our model results were relatively similar to
GFED4, which also runs at 0.25<inline-formula><mml:math id="M6" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution, whereas our 500 m
estimates were substantially lower. We found that lower emissions at finer
resolutions are mainly the result of reduced representation errors when
comparing modelled estimates of fuel load and consumption to field
measurements, as part of the model calibration. Additional errors stem from
the model simulation at coarse resolution and lead to an additional 0.02 Pg C yr<inline-formula><mml:math id="M7" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> difference in estimates. These errors exist due to the aggregation of quantitative and qualitative model input data; the average-
or majority- aggregated values are propagated in the coarse-resolution
simulation and affect the model parameterization and the final result. We
identified at least three error mechanisms responsible for the differences
in estimates between 500 m and 0.25<inline-formula><mml:math id="M8" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution simulations,
besides those stemming from representation errors in the calibration
process, namely (1) biome misclassification leading to errors in
parameterization, (2) errors due to the averaging of input data and the
associated reduction in variability, and (3) a temporal mechanism related to
the aggregation of burned area in particular. Even though these mechanisms
largely neutralized each other and only modestly affect estimates at a
continental scale, they lead to substantial error at regional scales with
deviations of up to a factor 4 and may affect large-scale estimates
differently for other continents. These findings could prove valuable in
improving coarse-resolution models and suggest the need for increased
spatial resolution in global fire emission models.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e181">Fires exert a key influence on the global climate by the release of trace
gases and aerosols into the atmosphere
(Andreae and Merlet, 2001; Ciais et al., 2013; Ward et al., 2012). Furthermore, fires partly shape, and in the long-term sometimes determine, the vegetation state of landscapes, thus affecting the storage capacity of carbon (Rabin et al., 2017). About 70 % of global
burned area occurs in Africa (Giglio et al., 2018), mostly
due to surface fires with relatively low fuel consumption, leading to
roughly half of the global fire carbon emissions
(van der Werf et al., 2010). The majority of fires in Africa occur in the
savannas (Archibald et al., 2009), an ecosystem that is depending on fires and where trees have evolved to tolerate fire (Beerling and Osborne, 2006).
African savannas are currently undergoing major shifts in fire activity due
to demographic changes and agricultural<?pagebreak page4682?> expansion, leading to a decrease in
fire occurrence (Andela and van der Werf, 2014).</p>
      <p id="d1e184">Efforts to estimate global fire emissions have been made since the 1980s (Seiler and Crutzen, 1980). Early estimates
were based on biome-specific parameterizations of fire return intervals and
biomass consumption rates, extrapolated using vegetation maps. More
recently, satellite products have become an important tool for improved
estimates of fire emissions, mapping fire events globally and giving insight
in fire impacts and dynamics. Two main satellite-based approaches to model
fire emissions exist, based either on observed burned area in combination
with a biogeochemical or fuel load model, or based on fire radiative power
(FRP), which is directly related to fire emissions after integration over
time to obtain fire radiative energy (FRE)
(Kaiser et al., 2012; Roberts et al., 2018; Wooster, 2002). Burned area is
determined after a fire has occurred, signified by a change in surface
reflectance associated with the burn scar
(Giglio et al., 2018), whereas
FRP is based on the fire size and intensity, determined by the detection of the
thermal hot spot during a satellite overpass.</p>
      <p id="d1e187">In fire emission models, aboveground biomass and resulting fuel load are key
variables for estimating emissions. Biogeochemical models dynamically
simulate biomass build-up and degradation and come with different levels of
process complexity (Hély et al., 2003, 2007; Hoelzemann et al., 2004; Schultz et al., 2008; van der Werf et al., 2017). In regional models, parameterizations derived from field
data can be used to accurately represent local relations between, e.g., precipitation and plant productivity and between soil moisture and
combustion completeness, and resulting fuel load can be calibrated at a local
scale (Alleaume et al., 2005; Hély et al., 2007; Korontzi et al., 2004; Russell-Smith et
al., 2009). Some of these models are based on predetermined fuel load maps
(Ito and
Penner, 2004). However, in global-scale models, simple parameterizations are
often inaccurate due to the large variety in, e.g., vegetation dynamics and
fire characteristics across continents and biomes
(Lehmann et al., 2014; Rogers et al., 2015). As a result, these models often depend
heavily on satellite-derived climate and weather data and land and
vegetation characteristics. However, global satellite data on fire-specific
processes are scarce (Pettinari and Chuvieco, 2016).
Therefore, field measurements are crucial in constraining modelled fuel load
and consumption
(Hély et al., 2003; van Leeuwen et al., 2014). Modelled fuel load can be combined
with combustion completeness factors to estimate fuel consumption and then
with satellite-based burned area maps to estimate dry matter emissions.
Finally, emission factors are used to convert dry matter or carbon emissions
into emissions of trace gases and aerosols, which are key inputs for
atmospheric and Earth system models
(Akagi et al., 2011; Meyer et al., 2012; Wooster et al., 2011; Yokelson et al.,
2013).</p>
      <p id="d1e190">The detection of burn scars is limited by the spatial resolution of the
satellite detector, as burned patches smaller than the satellite footprint
are often not detected. When these relatively small fires are active during
the satellite overpass, the thermal anomaly and its FRP may be detectable.
Recent burned area products combine both of these detection methods to
complement burned area based on burn scar detection with relatively small
fires from active fire detection. In a first study looking into this on a
global scale, Randerson et al. (2012) found an increase in global burned area of approximately 35 % due
to the addition of small-fire burned area. These small fires are often
human-induced (prescribed, agricultural, deforestation) and mainly occur in
croplands, woody savannas and tropical forests. Consequently, by the
inclusion of these small fires, global fire emission estimates based on
burned area from the Global Fire Emissions Database (GFED) increased from
1.5 Pg C yr<inline-formula><mml:math id="M9" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in GFED4 to 2.2 Pg C yr<inline-formula><mml:math id="M10" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in GFED4s (“s” for small fires) on average over 1997–2016
(van der Werf et al., 2017). For sub-Saharan Africa alone, emissions increased from 0.8 Pg C yr<inline-formula><mml:math id="M11" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in GFED4 to 1.1 Pg C yr<inline-formula><mml:math id="M12" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in GFED4s.</p>
      <p id="d1e242">Besides the error in burned area due to limitations of the satellite
detector and undetected small fires (amongst other things), the accuracy of
fire emission estimates may also be affected by the coarse spatial
resolution of most fire emission models. Emission models based on burned
area, such as GFED4, often perform at a spatial resolution significantly
coarser than the native resolution of the burned area dataset. This is
necessary because input data used to calculate emissions, especially
meteorological data, are usually much coarser than satellite data. Because of
this and the necessary trade-off between model complexity and computational
resources, the burned area data are spatially aggregated to coarser
resolution prior to the model simulation (e.g. 0.25<inline-formula><mml:math id="M13" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> spatial
resolution used in GFED4). However, there might be large heterogeneity of
fuels and combustion characteristics within aggregated burned area
(Alleaume et al., 2005; Hély et al., 2003). Whether aggregation, and the
associated loss in heterogeneity, leads to significant errors in large-scale
averaged model estimates such as GFED is not known. Therefore, it is
necessary to understand the implications of spatial aggregation for the
accuracy of modelled fire emissions.</p>
      <p id="d1e254">Previous studies have examined how relatively coarse spatial resolution
could lead to biases in the results of remote sensing studies. For example,
Eva and Lambin (1998) analysed biases in 30 m Landsat TM burned
area for Central Africa after spatial aggregation to a resolution of 1 km.
Similarly, García
Lázaro et al. (2013) studied the burned area classification error in
Iberia for several satellite products that span a range of resolutions
(250 m, 1100 m, 0.05<inline-formula><mml:math id="M14" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>) as compared to the 30 m Landsat product.
Comparable studies were done at a continental scale by
Silva et al. (2005)
for Africa and Miettinen and Liew (2009) for southeast Asia. All of the previously mentioned studies found that at
coarser resolution, small and fragmented burned area tends to be
underestimated compared to the finest-resolution data available, whereas
large fires and spatial homogeneity leads to<?pagebreak page4683?> better estimates (with a
tendency to overestimate). Nelson et
al. (2009) specifically studied the impact of spatial aggregation by
comparing majority- and average-based aggregation of an inventory-based
forest classification (forest or non-forest). For majority-based
aggregation, they reached conclusions analogous to the previously mentioned
burned area studies, namely that at coarser resolution the forest proportion
is underestimated for sparsely forested area, whereas it is overestimated
for heavily forested area. For average-based aggregation however, the mean
forest proportion remained constant, as a binary area is averaged to
fractional area in the aggregate pixels. Furthermore, image variability
decreased for coarser resolutions because the average-aggregated pixel
values converge towards the mean value of the entire image
(Bian, 1997).</p>
      <p id="d1e266">Errors introduced by spatially aggregating fine-resolution input datasets to
coarser resolution are propagated in the models driven by these datasets
(Crosetto et al., 2001). When aggregated
datasets are used in a non-linear model, an additional error arises due to
the non-linear propagation of averaged values, known as Jensen's inequality
(Jensen, 1906). In general, for every non-linear function there
exists an inequality between taking the average of the function result
afterwards versus averaging the function input variables beforehand. We
could, for example, consider a fire emission model as a single non-linear
function. When running this model at aggregated resolution, an inequality
(i.e. error) exists compared to the native-resolution model. The magnitude
of the inequality is dependent on the variance of, and covariance between,
the input variables and the amount of local curvature (second derivative)
of the function, which is a measure of its non-linearity
(Denny, 2017). Jensen's inequality is mostly discussed in
literature in relation to ecology
(Cale et al., 1983; Duursma and Robinson, 2003; Pierce and Running, 1995; Ruel and Ayres, 1999), but also in relation to biology (Denny,
2017) and geology (Heuvelink and Pebesma, 1999),
in the context of spatial, temporal and class averaging (e.g. plant
functional types, PFTs). However, the implications of this inequality for
fire emission estimates is not known. The resulting error in emission
estimates could be of particular importance, since fire processes are
generally highly heterogeneous
(Randerson et al., 2012; Roy and Landmann, 2005).</p>
      <p id="d1e269">In this context, the aim of this study is to better understand the impact of
spatial resolution on the resulting biomass and fire emission estimates.
Whether the aforementioned errors from modelling at aggregated resolutions
result in significant errors in large-scale averaged fire emission estimates
such as GFED and fire-adapted dynamic global vegetation models (DGVMs; e.g.
those used in FireMIP, Fire Modeling Intercomparison
Project, Rabin et al., 2017) has until
now not been investigated
(van der Werf et al., 2017). To this end, we developed a fire emission model
driven by burned area and capable of running at 500 m spatial
resolution to produce a first emission estimate at this resolution for
sub-Saharan Africa. We then compared these emission estimates to three
additional simulations using the same model for a range of aggregated
resolutions (0.25, 0.125, 0.05<inline-formula><mml:math id="M15" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>) in order to study the impact of spatial resolution on model results. Besides a
comparison of large-scale emission estimates, a substantial part of our work
was to understand local-scale biases due to aggregation and to identify the
underlying error mechanisms. As part of this analysis, we also considered
the role of modelled biomass, a key precursor for resulting emissions.
Finally, we compared our 500 m and 0.25<inline-formula><mml:math id="M16" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution model
results to the emission estimates from GFED4(s) and tried to contextualize
the changes in emission estimates due to modelling at aggregated resolutions
in respect to changes due to model validation improvements and the
incorporation of small fires. The insights gained in this study could
possibly form an important step forward in the direction of global fire
emission modelling at native satellite resolution and/or in implementing
countermeasures for reducing errors when modelling at aggregated
resolutions.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Methods</title>
      <p id="d1e298">We developed a model to estimate fire emissions for sub-Saharan Africa for
the 2002–2017 period with a monthly time step. We start with describing the
model, which was derived from the GFED modelling framework and adapted to
run at a range of spatial resolutions (Sect. 2.1). This is followed by a
description of the various input datasets (Sect. 2.2). We then describe the model
optimization using satellite-based reference data and field measurements of
fuel load (FL) and fuel consumption (FC) (Sect. 2.3). Finally, we describe the
simulations performed (Sect. 2.4) and the methods used to compare different model
resolutions (Sect. 2.5).</p>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Model description</title>
      <p id="d1e308">For this study a simplified version of the GFED model was used. GFED is
rooted in the Carnegie–Ames–Stanford approach (CASA) biosphere model, which
was developed to simulate the terrestrial carbon cycle, using satellite data
to constrain carbon uptake and other fluxes
(Field et al., 1995; Potter et al., 1993).
Van der Werf et al. (2003) extended this model to include fire processes and provided spatially resolved estimates of fire emissions for the (sub)tropics. Over time, further modifications were made to GFED, including improved burned area identification (Giglio et al., 2006, 2013) and a distinction between different sources of fire emissions on a global scale (van der Werf et al., 2006, 2010). The most recent version, GFED4s, also aims to
account for relatively small fires that remain undetected by most burned
area algorithms (Randerson et al., 2012; van der Werf et al., 2017). These small fires add about 15 % burned area to our study area in Africa. Recent research suggests this increase in burned area may be conservative
(Roteta et al., 2019). For this study we have simplified the GFED model so it can be<?pagebreak page4684?> run at 500 m resolution on a continental scale; as compared to the
0.25<inline-formula><mml:math id="M17" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution of GFED4s running on a global scale. Only the
main GFED functionality relevant for aboveground dynamics in biomass, litter, and fire emissions was maintained. More refined mechanisms represented in
GFED, such as belowground dynamics, herbivory, grazing, and fuelwood
collection, were not implemented. Furthermore, no specific deforestation
mechanisms were modelled. These simplifications not only made required
computational resources manageable, but also made it easier to disentangle
mechanisms that cause differences between the model runs at different
resolutions, which was our key objective.</p>
      <p id="d1e320">The model has a pool-based structure wherein net primary productivity (NPP)
is partitioned over various biomass pools that are affected by losses due
to turnover and fire processes. Aboveground biomass (AGB) and belowground
biomass (BGB) are considered as the live part of the total available carbon
above and below the ground, and the total aboveground live and dead carbon
is referred to as aboveground biomass and litter (AGBL), all expressed in
mass of carbon per unit area (g C m<inline-formula><mml:math id="M18" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). NPP was calculated as the
product of incoming solar radiation (SSR), the fraction of
photosynthetically active radiation (fPAR) and a biome-specific light-use
efficiency (LUE; <inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>biome</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>):
            <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M20" display="block"><mml:mrow><mml:mtext>NPP</mml:mtext><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mtext>SSR</mml:mtext><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>⋅</mml:mo><mml:mtext>fPAR</mml:mtext><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>biome</mml:mtext></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M21" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> is the grid location coordinate and <inline-formula><mml:math id="M22" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> is the time in months. NPP
was distributed over tree and non-tree vegetation classes by multiplication
with fractions of tree and non-tree vegetation cover and further
distributed in equal parts over the corresponding biomass pools. Trees were
represented as leaf, stem, and root pools, all receiving one-third of tree-allocated NPP. Non-tree vegetation was represented as grass and root pools,
both receiving half of non-tree-allocated NPP. In this simplified
categorization other non-tree vegetation types, such as shrubs, are part of
the grass pool. For trees the root pool was subdivided into separate fine- and coarse-root pools, with 20 % of the stem NPP allocated to the coarse
roots, whereas for non-tree vegetation all root biomass consisted of fine
roots. We used biome-specific LUE values based on those reported by
Field et al. (1995). Since LUE was not reported for the savanna biome, we used the open-shrubland value of 0.208 g C MJ<inline-formula><mml:math id="M23" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for open savannas and an empirically determined value of 0.280 g C MJ<inline-formula><mml:math id="M24" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for woody savannas (see also Table 1). The LUE value for woody savannas was chosen to be between values reported for forest and grassland biomes.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e445">Biome-level model parameter values for light-use efficiency (LUE;
<inline-formula><mml:math id="M25" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula>, unitless) and turnover rates (<inline-formula><mml:math id="M26" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>, years) for the
stem, leaf, grass, litter, and coarse woody debris (cwd) pools. Two
additional columns give the average effective turnover rates (<inline-formula><mml:math id="M27" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> eff., years)
for the litter and cwd pools after scaling by the abiotic scalar. Turnover
rates that were different for the 0.25<inline-formula><mml:math id="M28" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution model
calibration are given in parentheses.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="9">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:colspec colnum="9" colname="col9" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Biome</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M29" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M30" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">stem</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M31" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">leaf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M32" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">grass</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">litt</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">litt</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> eff.</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">cwd</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col9"><inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">cwd</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> eff.</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Evergreen needleleaf</oasis:entry>
         <oasis:entry colname="col2">0.284</oasis:entry>
         <oasis:entry colname="col3">60</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">0.5</oasis:entry>
         <oasis:entry colname="col6">0.5</oasis:entry>
         <oasis:entry colname="col7">–</oasis:entry>
         <oasis:entry colname="col8">4</oasis:entry>
         <oasis:entry colname="col9">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Evergreen broadleaf</oasis:entry>
         <oasis:entry colname="col2">0.354</oasis:entry>
         <oasis:entry colname="col3">60</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">0.5</oasis:entry>
         <oasis:entry colname="col6">0.5</oasis:entry>
         <oasis:entry colname="col7">0.8</oasis:entry>
         <oasis:entry colname="col8">4</oasis:entry>
         <oasis:entry colname="col9">6.1</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Deciduous needleleaf</oasis:entry>
         <oasis:entry colname="col2">0.280</oasis:entry>
         <oasis:entry colname="col3">60</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">0.5</oasis:entry>
         <oasis:entry colname="col6">0.5</oasis:entry>
         <oasis:entry colname="col7">–</oasis:entry>
         <oasis:entry colname="col8">4</oasis:entry>
         <oasis:entry colname="col9">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Deciduous broadleaf</oasis:entry>
         <oasis:entry colname="col2">0.255</oasis:entry>
         <oasis:entry colname="col3">35 (60)</oasis:entry>
         <oasis:entry colname="col4">0.5</oasis:entry>
         <oasis:entry colname="col5">0.5</oasis:entry>
         <oasis:entry colname="col6">0.5</oasis:entry>
         <oasis:entry colname="col7">1.7</oasis:entry>
         <oasis:entry colname="col8">4</oasis:entry>
         <oasis:entry colname="col9">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Mixed forest</oasis:entry>
         <oasis:entry colname="col2">0.283</oasis:entry>
         <oasis:entry colname="col3">35</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">0.5</oasis:entry>
         <oasis:entry colname="col6">0.5</oasis:entry>
         <oasis:entry colname="col7">0.8</oasis:entry>
         <oasis:entry colname="col8">4</oasis:entry>
         <oasis:entry colname="col9">6.3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Closed shrubland</oasis:entry>
         <oasis:entry colname="col2">0.299</oasis:entry>
         <oasis:entry colname="col3">30</oasis:entry>
         <oasis:entry colname="col4">0.5</oasis:entry>
         <oasis:entry colname="col5">0.3</oasis:entry>
         <oasis:entry colname="col6">0.2</oasis:entry>
         <oasis:entry colname="col7">1.2</oasis:entry>
         <oasis:entry colname="col8">4</oasis:entry>
         <oasis:entry colname="col9">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Open shrubland</oasis:entry>
         <oasis:entry colname="col2">0.208</oasis:entry>
         <oasis:entry colname="col3">30</oasis:entry>
         <oasis:entry colname="col4">0.5</oasis:entry>
         <oasis:entry colname="col5">0.3</oasis:entry>
         <oasis:entry colname="col6">0.1</oasis:entry>
         <oasis:entry colname="col7">0.3</oasis:entry>
         <oasis:entry colname="col8">1</oasis:entry>
         <oasis:entry colname="col9">2.6</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Woody savanna</oasis:entry>
         <oasis:entry colname="col2">0.280</oasis:entry>
         <oasis:entry colname="col3">35 (40)</oasis:entry>
         <oasis:entry colname="col4">0.5</oasis:entry>
         <oasis:entry colname="col5">0.3 (0.5)</oasis:entry>
         <oasis:entry colname="col6">0.15 (0.2)</oasis:entry>
         <oasis:entry colname="col7">0.5</oasis:entry>
         <oasis:entry colname="col8">1 (2)</oasis:entry>
         <oasis:entry colname="col9">3.5</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Open savanna</oasis:entry>
         <oasis:entry colname="col2">0.208</oasis:entry>
         <oasis:entry colname="col3">5 (10)</oasis:entry>
         <oasis:entry colname="col4">0.5</oasis:entry>
         <oasis:entry colname="col5">0.3 (0.5)</oasis:entry>
         <oasis:entry colname="col6">0.2</oasis:entry>
         <oasis:entry colname="col7">0.4</oasis:entry>
         <oasis:entry colname="col8">1</oasis:entry>
         <oasis:entry colname="col9">2.0</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Grassland</oasis:entry>
         <oasis:entry colname="col2">0.229</oasis:entry>
         <oasis:entry colname="col3">18</oasis:entry>
         <oasis:entry colname="col4">0.5</oasis:entry>
         <oasis:entry colname="col5">0.2</oasis:entry>
         <oasis:entry colname="col6">0.1</oasis:entry>
         <oasis:entry colname="col7">0.2</oasis:entry>
         <oasis:entry colname="col8">1</oasis:entry>
         <oasis:entry colname="col9">2.4</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Cropland</oasis:entry>
         <oasis:entry colname="col2">0.242</oasis:entry>
         <oasis:entry colname="col3">15</oasis:entry>
         <oasis:entry colname="col4">0.5</oasis:entry>
         <oasis:entry colname="col5">0.2</oasis:entry>
         <oasis:entry colname="col6">0.1</oasis:entry>
         <oasis:entry colname="col7">0.2</oasis:entry>
         <oasis:entry colname="col8">1</oasis:entry>
         <oasis:entry colname="col9">2.1</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e953">When the model reaches its equilibrium state after the spin-up phase, the
carbon input from NPP is balanced by the carbon output via fires and
respiration because of decomposition. Depending on pool-specific turnover
rates and fire processes, biomass decays into three litter pools: fine
litter, coarse woody debris (cwd), and soil organic matter. The
pool-specific turnover rates, loosely based on those used in GFED4
(van der Werf et al., 2017), were optimized to biome-specific values in a series of model validation steps (see Sect. 2.3, Model optimization). The
vegetation exposed to fire is either combusted and emitted as carbon
directly, killed and converted to litter, or unaffected by the fire. The
amount of biomass and litter exposed to fire was calculated by
multiplication of the available flammable carbon and the burned fraction for
each pixel:
            <disp-formula id="Ch1.E2" content-type="numbered"><label>2</label><mml:math id="M37" display="block"><mml:mtable class="split" rowspacing="0.2ex" columnspacing="1em" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi>C</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:munder><mml:mo movablelimits="false">∑</mml:mo><mml:mtext>No. of pools</mml:mtext></mml:munder><mml:mfenced open="[" close=""><mml:mrow><mml:msub><mml:mtext>AGBL</mml:mtext><mml:mtext>pool</mml:mtext></mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mfenced open="" close="]"><mml:mrow><mml:mo>⋅</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mtext>tree</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:mtext>FTC</mml:mtext><mml:mo>)</mml:mo><mml:mo>⋅</mml:mo><mml:msub><mml:mtext>CC</mml:mtext><mml:mtext>pool</mml:mtext></mml:msub><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>SM</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced><mml:mo>⋅</mml:mo><mml:mtext>BA</mml:mtext><mml:mfenced close=")" open="("><mml:mrow><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfenced><mml:mo>⋅</mml:mo><mml:msub><mml:mi>f</mml:mi><mml:mtext>c</mml:mtext></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
          where <inline-formula><mml:math id="M38" display="inline"><mml:mi>C</mml:mi></mml:math></inline-formula> is the amount of carbon combusted and released to the atmosphere,
<inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mtext>tree</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is a fire-induced tree mortality scalar, CC is the combustion
completeness, BA is the burned area, i.e. the fraction of pixel burned, and
<inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mtext>c</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the fraction of carbon in fuel, for which we used 50 %. The part of fire-exposed carbon that is combusted was determined by
pool-specific combustion completeness values that were scaled linearly
between a predefined minimum and maximum value (see Table 1 in
van der Werf et al., 2010) dependent on an empirically defined soil moisture
scalar. This scalar was defined as
            <disp-formula id="Ch1.E3" content-type="numbered"><label>3</label><mml:math id="M41" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>SM</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mtext>SM</mml:mtext><mml:mfenced open="(" close=")"><mml:mrow><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfenced></mml:mrow><mml:mn mathvariant="normal">0.37</mml:mn></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.4</mml:mn></mml:mrow><mml:mn mathvariant="normal">0.6</mml:mn></mml:mfrac></mml:mstyle><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mtext>with</mml:mtext><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">0.1</mml:mn><mml:mo>&lt;</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>SM</mml:mtext></mml:msub><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where SM is the volumetric soil water content in units of volume fraction.
The scalar was obtained by first standardizing the SM values to a range
between 0 and 1 and then dividing by 0.6 and capping at 1 to remove
anomalously high values related to wetlands. Additionally, the scalar values
were capped to not be lower than 0.1, simulating a minimum soil moisture
level below which moisture-dependent processes are not further affected. Dry
conditions result in CC values closer to the maximum and vice versa for wet
conditions. A mortality scalar for woody vegetation simulated whether trees
exposed to fire are killed, and consequently directly combusted, or left as
litter (van der Werf et al., 2003). This scalar was expressed as the squared fraction of tree cover to total vegetation to resemble the range from low fire-induced mortality in open landscapes (where trees are adapted to fire) to high mortality in dense tropical forests where trees are not adapted. When a tree is killed, all of the unburned aboveground and belowground biomass is transferred to the litter pools. More specifically, leaves and grass become fine litter, dead stems are added to the cwd pool, and dead roots are added to the soil pool.</p>
      <?pagebreak page4685?><p id="d1e1161">The decomposition of litter is dependent on temperature and moisture
conditions. The rate of decomposition was based on pool-specific turnover
rates (Table 1) and scaled by an abiotic scalar. The abiotic scalar
(<inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>A</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) was defined as
            <disp-formula id="Ch1.E4" content-type="numbered"><label>4</label><mml:math id="M43" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>A</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>T</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>SM</mml:mtext></mml:msub></mml:mrow><mml:mn mathvariant="normal">0.9</mml:mn></mml:mfrac></mml:mstyle><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mtext>with</mml:mtext><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">0.1</mml:mn><mml:mo>&lt;</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>A</mml:mtext></mml:msub><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>T</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the temperature scalar:
            <disp-formula id="Ch1.E5" content-type="numbered"><label>5</label><mml:math id="M45" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>T</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:msubsup><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">10</mml:mn><mml:mstyle scriptlevel="+1"><mml:mfrac><mml:mrow><mml:mi>T</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow><mml:mn mathvariant="normal">10</mml:mn></mml:mfrac></mml:mstyle></mml:msubsup><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mtext>with</mml:mtext><mml:mspace linebreak="nobreak" width="0.25em"/><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>T</mml:mtext></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M46" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> is the temperature in <inline-formula><mml:math id="M47" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and <inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is the
temperature coefficient, for which we used a value of 1.5 and a capped
maximum of 1.0 at 30 <inline-formula><mml:math id="M49" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, similar to van der Werf et al. (2013). A
<inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> value of 1.5 implies a 50 % increase for every 10 <inline-formula><mml:math id="M51" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C
rise in temperature. Just like the moisture scalar, the abiotic scalar was
standardized to a range from 0 to 1 and capped at a minimum of 0.1. Part of
the turnover-exposed carbon is respired directly, based on a respiration
fraction of 0.5. The remaining part degrades consecutively through the cwd
(only originating from trees), fine litter, and soil pools and finally
enters the slow decomposition stage. Every degradation step is again subject
to direct respiration. The belowground organic matter algorithm was
simplified compared to GFED because the belowground dynamics are not
relevant for fire dynamics in our study area; fires generally do not occur
in wetlands and peatlands in Africa. The LUE values and turnover rates used
for the biomass and litter pools for each biome are summarized in Table 1.
This table also gives the average effective turnover rates for the litter
and cwd pools after application of the abiotic scalar.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e1345">Overview of model input datasets.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Variable</oasis:entry>
         <oasis:entry colname="col2">Product</oasis:entry>
         <oasis:entry colname="col3">Spatial res.</oasis:entry>
         <oasis:entry colname="col4">Temporal res.</oasis:entry>
         <oasis:entry colname="col5">Reference</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">fPAR</oasis:entry>
         <oasis:entry colname="col2">MCD15A2H</oasis:entry>
         <oasis:entry colname="col3">500 m</oasis:entry>
         <oasis:entry colname="col4">8-daily</oasis:entry>
         <oasis:entry colname="col5">Myneni et al. (2015)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">FTC, NTV</oasis:entry>
         <oasis:entry colname="col2">MOD44B</oasis:entry>
         <oasis:entry colname="col3">250 m</oasis:entry>
         <oasis:entry colname="col4">Annual</oasis:entry>
         <oasis:entry colname="col5">Dimiceli et al. (2015)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">BA</oasis:entry>
         <oasis:entry colname="col2">MCD64A1</oasis:entry>
         <oasis:entry colname="col3">500 m</oasis:entry>
         <oasis:entry colname="col4">Monthly</oasis:entry>
         <oasis:entry colname="col5">Giglio et al. (2018)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Land cover</oasis:entry>
         <oasis:entry colname="col2">MCD12Q1</oasis:entry>
         <oasis:entry colname="col3">500 m</oasis:entry>
         <oasis:entry colname="col4">Annual</oasis:entry>
         <oasis:entry colname="col5">Friedl et al. (2010)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Shortwave radiation</oasis:entry>
         <oasis:entry colname="col2">ERA-Interim</oasis:entry>
         <oasis:entry colname="col3">0.25<inline-formula><mml:math id="M52" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">Monthly</oasis:entry>
         <oasis:entry colname="col5">Dee et al. (2011)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Air temperature</oasis:entry>
         <oasis:entry colname="col2">ERA-Interim</oasis:entry>
         <oasis:entry colname="col3">0.25<inline-formula><mml:math id="M53" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">Monthly</oasis:entry>
         <oasis:entry colname="col5">Dee et al. (2011)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Soil moisture</oasis:entry>
         <oasis:entry colname="col2">ERA-Interim</oasis:entry>
         <oasis:entry colname="col3">0.25<inline-formula><mml:math id="M54" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">Monthly</oasis:entry>
         <oasis:entry colname="col5">Dee et al. (2011)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Input datasets</title>
      <p id="d1e1547">The model used MODIS (MODerate resolution Imaging Spectroradiometer)
Collection 6 satellite observation products with a 500 m spatial
resolution as input where available and previous MODIS collections or
coarser non-MODIS datasets otherwise (see Table 2). The meteorological input
parameters were based on 0.25<inline-formula><mml:math id="M55" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution ERA-Interim reanalysis
data (Dee et al., 2011) from the European Centre for Medium Range Weather Forecasts (ECMWF). The datasets used cover the time period from 2002 to 2017, unless noted otherwise. The MODIS MCD15A2H product of fraction photosynthetically active radiation (fPAR; Myneni et al., 2015) was used in
combination with reanalysis SSR (Dee et al., 2011) to calculate NPP (see Eq. 1). The distribution of biomass over tree and non-tree vegetation classes was based on the MODIS MOD44B vegetation continuous fields (VCF; Dimiceli et
al., 2015) product for the fractions of tree cover (FTC) and non-tree
vegetation cover (NTV). Fire extent was based on BA from the
MODIS MCD64A1 dataset (Giglio et al., 2018). The decomposition of litter was based on temperature and soil moisture scalars derived from ERA-Interim reanalysis air temperature (2 m temperature) and soil moisture (volumetric soil water layer 1) data. We delineated biomes in terms of land cover types based on the MODIS MCD12Q1 land cover type product, collection 5.1
(Friedl et al., 2010). The last available year of data for this product, 2013, was also used for subsequent years. For this study, the Land Cover Type 2 classification scheme produced by the University of Maryland (UMD) was used.</p>
      <p id="d1e1559">The 500 m resolution MODIS input datasets were spatially aggregated to
0.050<inline-formula><mml:math id="M56" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>, 0.125<inline-formula><mml:math id="M57" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>, and 0.250<inline-formula><mml:math id="M58" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution using
average-based aggregation. As an exception, the qualitative land cover type
data were aggregated using majority-based aggregation by assigning the most
frequently occurring land cover class to the aggregate grid cell. The
0.25<inline-formula><mml:math id="M59" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution reanalysis data were resampled to 500 m
resolution by nearest-neighbour interpolation, i.e. by using the reanalysis
0.25<inline-formula><mml:math id="M60" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> grid cell value nearest to each MODIS pixel. All MODIS data
with sub-monthly temporal resolution were averaged to monthly resolution,
using the number of days in the month as weights.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Model optimization</title>
      <p id="d1e1615">We tuned our model to match satellite-based data on aboveground woody
biomass (AGBw) (Avitabile et al., 2016) and field measurements of fuel load and consumption (van<?pagebreak page4686?> Leeuwen et al., 2014). Since NPP is the driver for biomass growth, we first ensured that biome-level NPP corresponded to GFED4
(van der Werf et al., 2017). Then, the AGBw was optimized to agree with
observation-based gridded estimates by Avitabile et al. (2016) by tuning the turnover rates per biome. As a first-order approximation we tuned AGBw with the stem turnover rate, since the stems of
trees hold at least 95 % of the total AGB for all forest biomes
(Poorter et al., 2012). Herbaceous (i.e. non-tree) biomass is typically below 250 g C m<inline-formula><mml:math id="M61" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and therefore within the uncertainty range of the dataset by Avitabile et al. (2016). After optimization of the stem biomass, the turnover rates of the leaf, grass, and root pools were adjusted to attain root : stem : leaf biomass ratios (i.e. root : shoot ratios) in line with the biome-specific ratios as reported by Poorter et al. (2012). The
previously described subdivision of root biomass into separate coarse- and
fine-root pools was used to improve root : shoot ratios. The chosen turnover
rates also influence the amount of litter produced. Even though the amount
of tree biomass is not always relevant for fires, since most African fires
are ground fires and deforestation mechanisms are not specifically part of
the model, it does determine the amount of cwd and part of the fine litter
produced.</p>
      <p id="d1e1630">In the final validation step, modelled FL and FC were compared to the
compilation of field measured values by van
Leeuwen et al. (2014). For the African continent the database contained 16
measurement records that reported FL and FC, of which 9 are grouped into
different fuel classes (e.g. grass, leaves, litter, cwd). Additional field
studies compiled by Scholes et al. (2011) on FL in African
savannas were included in the comparison, giving 73 measurements on total
FL. For all field records used, measured FL consists of grass, litter, cwd,
and occasionally leaves. As a consequence, the total FL estimates reported
in our comparison to the measurements involved a variable number of model
pools, dependent on what fuel classes were measured in the corresponding
field study. Our definition of FL does not include the stem fuel class (and
thus is not the same as AGBL) as this class was not reported in any field
record used, which all consider ground fires in grass-dominated biomes where
trees are generally not affected. The field measurements were collocated
with model results based on the field plot coordinates. The modelled FL was
optimized for each biome separately by tuning turnover rates of the grass
and litter pools to match measured average FL and spread in measurements.
The root : shoot ratios were not significantly affected by this parameter
tuning. Due to the lack of sufficient field data on FC (16 records, at only
6 unique locations), we validated FC only using the average of all records
over all biomes.</p>
      <p id="d1e1633">All field measurements in the database were taken in savanna-type biomes,
and all except one (in Burkina Faso) were taken in southeast Africa (south
of 12<inline-formula><mml:math id="M62" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S and east of 23<inline-formula><mml:math id="M63" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E), resulting in the sample set
being less representative of other biomes and regions in Africa.
Furthermore, the majority of records did not report separate measurements of
specific fuel classes and thus only provided an overall fuel load value for
the combined fuel classes. As a result, the model validation was restricted
to a comparison of total reported FL and FC. The validation of individual
fuel classes was also complicated by the large spatial variability in
biomass allocation to fuel classes for field plots with similar properties and because field conditions that determine the allocation ratios were
unknown for most records (such as last fire occurrence, slash-and-burn or
not, early or late season fires).</p>
      <p id="d1e1654">For most field records, the field plot coordinates were given with a
precision of 2 decimal degrees. This yields an uncertainty of about 1 km,
which is larger than the model pixel size of 500 m. Therefore, more
accurate coordinates with 4 decimal degrees precision were hand-picked
based on the field site descriptions using Google Earth. Where possible,
homogeneously vegetated areas were picked to remove the influence of other
land cover types at a sub-500 m scale. For some field records the
coordinates of a settlement or city nearby the field plot were reported
instead of the actual plot, in which case again a neighbouring pixel was
chosen or the actual field plot was retraced in the vicinity of the
reported coordinates. Many of the reported measurements were conducted
before our study period, in which case the first model year, 2002, was used.
For studies where only the year of measurement was known, the month in the
middle of the regional fire season of the pixel was used. Finally, if there
were recent burned area and related drops in biomass in a pixel, indicative
of the influence of recent fires, a neighbouring unburned pixel was chosen.</p>
</sec>
<?pagebreak page4687?><sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Simulations</title>
      <p id="d1e1666">We ran our model at 500 m native MCD64A1 resolution for the 2002–2017
period, with a monthly temporal resolution.</p>
      <p id="d1e1669">A 200-year spin-up was done based on the 2002–2006 climatology in order to
stabilize the model pools and match total carbon in- and outflow. Additional
simulations were performed for the three aggregated resolutions
(0.050, 0.125, 0.250<inline-formula><mml:math id="M64" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>) to study the
effect of spatial resolution on modelled biomass, litter, and emissions. We
restricted our analysis to the African continent, in particular to the
Northern Hemisphere Africa (NHAF) and Southern Hemisphere Africa (SHAF)
regions as defined in GFED (van der Werf et al., 2006). These two regions contain the African continent south of 23<inline-formula><mml:math id="M65" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N latitude and will be referred to as sub-Saharan Africa.</p>
</sec>
<sec id="Ch1.S2.SS5">
  <label>2.5</label><title>Resolution comparison</title>
      <p id="d1e1698">We calculated the differences that occur in modelled AGBL and fire emissions
due to running the model at different spatial resolutions. We considered two
categories of differences: those that occur as part of the model calibration
and those that occur as part of the model simulation. The model calibration
is dependent on resolution because it includes parameter tuning to match
model pixels with field measurements, which is subject to a representation
error. This error exists due to the scale mismatch in comparing field
measurements to model grid cell averages (Janjić et al., 2018). At coarser resolution, the error is larger and as a consequence the model calibration is more biased. This leads to different model results at different resolutions, due to resolution-dependent model settings. We will refer to the differences between aggregated and 500 m resolution model results due to different model calibration as <italic>calibration</italic> differences. Besides calibration-related differences, differences in the model simulation result from the spatial aggregation of input datasets and the subsequent coarse computation of the model algorithm. We will refer to the related differences in model results between aggregated and 500 m resolution as <italic>simulation</italic> differences. We define simulation difference as the difference that occurs when running identical models with the exact same calibration but at different spatial resolutions.</p>
<sec id="Ch1.S2.SS5.SSS1">
  <label>2.5.1</label><title>Calibration differences</title>
      <p id="d1e1714">We studied calibration differences by comparing the model calibrated at
500 m resolution to an additional calibration at 0.25<inline-formula><mml:math id="M66" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>
resolution (Table 1, in parentheses). The 0.25<inline-formula><mml:math id="M67" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution
calibrated model was compared directly to GFED4, as it is based on a similar
coarse-resolution calibration, to determine whether our model
simplifications were justified. This also allowed GFED4 to serve as an
indirect reference to validate modelled emissions where FC field
measurements were lacking. For the comparison to GFED4, the database without
small fires was used (GFED4 instead of GFED4s) in order to compare the
models using the same amount of burned area. The discrepancy between the
burned area from GFED4 (without small fires but based on MCD64A1 Collection 5.1) and MCD64A1 Collection 6 was accounted for by raising GFED4 emissions according to the fraction of additional burned area in MCD64A1 Collection 6 compared to Collection 5.1.</p>
</sec>
<sec id="Ch1.S2.SS5.SSS2">
  <label>2.5.2</label><title>Simulation differences</title>
      <p id="d1e1743">Besides studying calibration differences, we additionally quantified
simulation differences as a result of running the model at different spatial
resolutions. For this analysis we used the parameters based on the
calibration at 500 m resolution to have the best model–data comparison.
Using the same calibration, absolute and relative differences in simulation
were calculated as the coarse-resolution results minus those of the
500 m native-resolution results. Beforehand, the 500 m results were
aggregated to the coarse resolution to be compared with, using average-based
aggregation. A positive simulation difference indicates higher estimates at
coarser resolution, and a negative difference indicates lower estimates at
coarser resolution. The analyses were limited to the 2002–2017 annual
average spatial fields to focus on spatial resolution effects.</p>
      <p id="d1e1746">In order to understand the error mechanisms that lead to simulation
differences and to quantify their contributions, we performed additional
simulations with altered model algorithms and compared these to the base
model simulation. For example, the contribution of fire in the overall
simulation difference, and its contribution to error at coarser resolution,
could be quantified by comparing an altered simulation without fire
processes (i.e. BA <inline-formula><mml:math id="M68" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0) to the base simulation with fires. This
contribution was calculated as the relative simulation difference with fires
minus the difference without fires. Similarly, we compared simulations with
and without fire-induced tree mortality to study the contribution of that
process in the overall simulation difference.</p>
      <p id="d1e1756">Notably, this method could only be used to quantify relative differences and
not absolute differences because the altered simulations resulted in
different model results, making absolute differences incomparable. In order
to enable unbiased subtraction of relative differences, we calculated the
log relative difference as
              <disp-formula id="Ch1.E6" content-type="numbered"><label>6</label><mml:math id="M69" display="block"><mml:mrow><mml:mi mathvariant="normal">log</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi mathvariant="normal">relative</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mi mathvariant="normal">difference</mml:mi><mml:mo>=</mml:mo><mml:mi>ln⁡</mml:mi><mml:mo>(</mml:mo><mml:mi>X</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi>X</mml:mi><mml:mtext>ref</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where, in our case, <inline-formula><mml:math id="M70" display="inline"><mml:mi>X</mml:mi></mml:math></inline-formula> is the coarse simulation result and <inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:msub><mml:mi>X</mml:mi><mml:mtext>ref</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the 500 m simulation result. Törnqvist et
al. (1985) proposed this method as a replacement for the ordinary relative
difference calculated as <inline-formula><mml:math id="M72" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>X</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>X</mml:mi><mml:mtext>ref</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>/</mml:mo><mml:msub><mml:mi>X</mml:mi><mml:mtext>ref</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> because of its additive, symmetric, and normed properties. For positive values, the ordinary relative difference ranges from <inline-formula><mml:math id="M73" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> to infinity, which is asymmetric and results in a positive bias when performing addition or subtraction. Using the log
difference,<?pagebreak page4688?> we could quantify the isolated contribution of a process, by
subtracting the log relative simulation difference of the altered simulation
from that of the base simulation, without introducing bias. The log relative
difference (i.e. <inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:mi>log⁡</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:math></inline-formula>) approximates the ordinary relative
difference (i.e. <inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mi>x</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>) for small values but deviates strongly for large
values due to the non-linear scale, which has to be considered when
interpreting the results. For example, an ordinary relative difference of
0.5 is equivalent to a log relative difference of 0.41, and analogously 1.0
translates to a 0.69 log relative difference.</p>
      <p id="d1e1874">Using the same method, we also isolated the error that originates from the
use of biome-specific LUEs and turnover rates. In the base model
simulation, the most commonly occurring land cover class was used for the
entire aggregate grid cell, and the turnover rates and LUE of the majority
biome were then applied to that grid cell. This leads to misclassification
of the minority land cover classes (Foody,
2002), which we will refer to as <italic>biome misclassification</italic>. Furthermore, the biome-specific parameters of the majority biome were used without considering the minority biomes in the grid cell, leading to what we refer to as the <italic>biome-specific parameter error</italic>. We could
account for this error by running the model for each biome separately so
that the biome-specific parameters were correctly used for each individual
biome. Then, the overall result was computed by summing the individual biome
results, weighted by their respective fractional cover in the grid cell.
Again, the altered run was compared to the base model simulation in order
to quantify the contribution of the error mechanism.</p>
      <p id="d1e1884">In a second “per-biome” approach, we additionally treated all average-based
aggregated input data on a per-biome basis. Because our model algorithm is
non-linear, Jensen's inequality exists between averaging the model result
afterwards, as for the 500 m model resolution, and averaging the input
data (i.e. FTC, NTV, fPAR, and BA) beforehand, as for the aggregated
resolution simulations. We will refer to the error due to average-based
aggregation of input datasets as the <italic>input aggregation error</italic>. In order to account for this error,
we aggregated all MODIS 500 m resolution input datasets to coarser
resolution according to the individual biome fractions in each grid cell. In
other words, we created average-based aggregated input datasets for each
biome area separately, instead of one aggregate for the entire grid cell
area. These aggregation products were then used in the corresponding
simulation of the individual biome, and the individual results were again
summed afterwards. This altered simulation is only meaningful when the LUE
and turnover rates are biome-specific as well and should thus be seen as an
addition to the altered simulation that accounts for the biome-specific
parameter error, as described in the previous paragraph.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><?xmltex \currentcnt{1}?><label>Figure 1</label><caption><p id="d1e1892">Area-averaged woody aboveground biomass (AGBw) for sub-Saharan
Africa as a whole and for individual biomes with significant tree cover
area. Both modelled values (500 m) and those derived from the reference
AGBw dataset by
Avitabile et al. (2016) are shown. Boxplots show the mean (dots), median (horizontal line),
25th and 75th percentiles (boxes), and the 5th and 95th
percentiles (whiskers). The 5th and 25th percentiles for Africa
and the open-savanna biome approach zero due to an abundance of pixels where
AGBw is zero.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019-f01.png"/>

          </fig>

      <p id="d1e1901">Finally, a simulation was performed with the incorporation of a modified
burned fraction (MBF), as described by van
der Werf et al. (2017) and used in GFED4. They introduced the MBF to account
for the underestimation of emissions in frequently burning areas at
0.25<inline-formula><mml:math id="M76" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> model resolutions. The uniform burning of a fraction of an
aggregated grid cell leads to the underestimation of emissions when fires occur
in the subsequent months because in this case fuel in the whole grid cell
is lowered by the fires burning in previous months, also in areas that did
not burn. In reality, the fuel is only lowered in the fraction of the grid
cell that actually burned, and subsequent fires burn the sub-grid-cell area
that did not burn yet. The extent of underestimation is mainly dependent on
the fire return interval. Our 500 m resolution model allowed us to
directly test the effectiveness of implementing an MBF at coarser
resolutions. We used a 4-month time period per burning season, analogous to van der Werf et al. (2017).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><?xmltex \currentcnt{2}?><label>Figure 2</label><caption><p id="d1e1915">Comparison of modelled FL and field measurements based on
calibration for 500 m resolution, shown as scatter plot and boxplots per
biome for <bold>(a, b)</bold> 500 m resolution and <bold>(c, d)</bold> 0.25<inline-formula><mml:math id="M77" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution
simulations. Boxplots show the mean (coloured dots), median (horizontal
line), 25th and 75th percentiles (boxes), and the range of values
(whiskers). The number of measurements involved is given below each boxplot.</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019-f02.png"/>

          </fig>

</sec>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Results</title>
      <?pagebreak page4689?><p id="d1e1949">We ran our model for a range of spatial resolutions, based on model
calibrations for either 500 m or 0.25<inline-formula><mml:math id="M78" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution to better
understand the calibration and simulation differences. First, we discuss the
results of the model calibration and validation for AGBw, FL, and FC at
500 m resolution. Next, we discuss the resulting AGBL and emission
estimates based on this model. Then we compare this to the results for the
0.25<inline-formula><mml:math id="M79" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution model calibration and relate this to GFED4. The
remainder of this chapter is dedicated to simulation differences, i.e. the
differences that occur between simulations with different spatial
resolutions. For the study of simulation differences, we used the model with
parameters based on the 500 m resolution calibration. In this section we
mainly focus on the differences between the 0.25<inline-formula><mml:math id="M80" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> and 500 m
resolutions and finish with the results for the intermediate resolutions of
0.125 and 0.050<inline-formula><mml:math id="M81" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>.</p>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Woody biomass and fuel load</title>
      <p id="d1e1995">The modelled total AGBw for Africa was 40.2 Pg C, compared to 40.6 Pg C for the Avitabile et al. (2016) reference dataset. Area-averaged values corresponded well, and the model was able to capture most of the spread in values (Fig. 1). This was as expected, since the model was calibrated to match the reference dataset. On a biome level, AGBw for tropical forest was 31.2 Pg C, which was 1.4 Pg C lower than the reference dataset. For woody and open savannas AGBw was 6.9 and 1.1 Pg C, respectively. Open savannas were slightly overestimated by 0.1 Pg C. The tropical forest, woody savanna, and open-savanna biomes contained the vast majority of tree biomass in Africa. Even though area-averaged AGBw for other forest types was significant, these biomes together constituted only 0.6 % of African land surface and did not contribute significantly to total AGBw.</p>
      <p id="d1e1998">The comparison between modelled FL and field measurements based on the
500 m model calibration is shown in Fig. 2a. A robust agreement was
found, with an <inline-formula><mml:math id="M82" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula> value of 0.78 (<inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.60</mml:mn></mml:mrow></mml:math></inline-formula>). The model tended to
overestimate low FL and underestimate high FL. Overall, the average, median, and spread over all field sites agreed well between modelled and measured
values (Fig. 2b). On average, FL for woody savanna and grassland was
overestimated by approximately 15 % (46 and 28 g C m<inline-formula><mml:math id="M84" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
respectively), whereas for shrubland values were underestimated by 11 %
(20 g C m<inline-formula><mml:math id="M85" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). Model estimates for open savannas agreed well with
measurements, even though the range of values was underestimated for this
biome. The shrubland and grassland statistics were both based on only four or five field measurements,<?pagebreak page4690?> which explains the large differences in quantiles and
restricted the analysis to a comparison of averages and ranges.</p>
      <p id="d1e2047">Figure 2c and d shows the same comparison to field measurements, but
simulated at 0.25<inline-formula><mml:math id="M86" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution. As in Fig. 2a and b, this
comparison was based on the 500 m resolution calibration and thus only
differed in simulation resolution. Compared to the 500 m resolution
simulation, FL modelled at 0.25<inline-formula><mml:math id="M87" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution had a much lower range
and was substantially underestimated in most biomes except grasslands. The
flat regression slope indicates that the spread in measured FL was not
captured at coarse resolution. This was partly because several FL
measurements were within one 0.25<inline-formula><mml:math id="M88" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> grid cell and thus yielded the
same model value. The 0.25<inline-formula><mml:math id="M89" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> simulation showed large estimation
errors, especially for high FL measurements. One woody savanna measurement
was incorrectly classified as tropical forest, leading to a large
overestimation of FL (Fig. 2d, black arrows).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><?xmltex \currentcnt{3}?><label>Figure 3</label><caption><p id="d1e2089">Total fire emissions for sub-Saharan Africa and individual biomes,
as compared to GFED4 (without small fires) and GFED4s (with small fires).
Solid orange and blue bars show the estimates based on the 500 m
resolution model calibration. Transparent bars show the estimates based on
the 0.25<inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution model calibration, highlighting that the
calibration difference is larger than the simulation difference.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019-f03.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Fire emissions</title>
      <p id="d1e2115">The 2002–2017 annually averaged total fire emissions for sub-Saharan Africa
were 0.68 Pg C yr<inline-formula><mml:math id="M91" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> based on the 500 m model, with an average FC of 249 g C m<inline-formula><mml:math id="M92" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> burned (Fig. 3, solid blue). The spatial distribution of
emissions was dictated by burned area (Fig. 4). The majority of emissions
occurred in the subtropical savanna regions. About 90 % of the fire
emissions (0.61 Pg C yr<inline-formula><mml:math id="M93" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) originated from the woody and open-savanna regions, where the majority (87 %) of the annually averaged burned area
was found. The highest FC was found in the tropical forest, where the
average was 998 g C m<inline-formula><mml:math id="M94" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> burned. However, the burned area was relatively low in this biome, resulting in low emissions.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><?xmltex \currentcnt{4}?><label>Figure 4</label><caption><p id="d1e2168">Burned area <bold>(a)</bold> and majority land cover type <bold>(b)</bold> and modelled fire emissions <bold>(c)</bold> and FC <bold>(d)</bold> for the 500 m resolution model, averaged over 2002–2017 and aggregated to 0.05<inline-formula><mml:math id="M95" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution for display.</p></caption>
          <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019-f04.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><label>Figure 5</label><caption><p id="d1e2200">Comparison of modelled FL at and field measurements based on
calibration for 0.25<inline-formula><mml:math id="M96" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution, shown as scatter plot and
boxplots per biome for <bold>(a, b)</bold> 500 m resolution and <bold>(c, d)</bold> 0.25<inline-formula><mml:math id="M97" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution simulations. The boxplot description is
equivalent to Fig. 2. Black triangles depict whiskers outside the plot
range.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019-f05.png"/>

        </fig>

      <p id="d1e2234">These 500 m emission estimates for sub-Saharan Africa were 24 % lower
than GFED4 (without small fires), which estimated 0.90 Pg C yr<inline-formula><mml:math id="M98" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and
an average FC of 331 g C m<inline-formula><mml:math id="M99" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> burned (Fig. 3). All biomes with
substantial emissions contributed to this difference, but woody savannas
were the biggest contributor. The lower emissions in our model were the
direct result of differences in FC compared to GFED4 because the amount of
BA of the two estimates was identical. The spatial distribution of FC was
less variable for most biomes in our model, except for the forest-dominated
biomes. The variability of FC across biomes in the model was represented in
a similar way as GFED4.</p>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Calibration differences due to spatial resolution</title>
      <p id="d1e2269">The parameters used for the 0.25<inline-formula><mml:math id="M100" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution model calibration
differed from the 500 m calibration in terms of slower turnover rates
for the stem, grass, and litter pools for some biomes (Table 1). This
resulted in roughly a 2.5 Pg C increase in AGBw and a 3.0 Pg C increase in AGBL. The majority of this increase was accounted for by the savanna biomes (both open and woody). Comparatively, non-woody AGB and litter increased more than woody AGB. Figure 5 shows the resulting modelled FL compared to field measurements – equivalent to Fig. 2, but for the 0.25<inline-formula><mml:math id="M101" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> instead of the 500 m resolution model calibration. For this coarse
calibration, again simulations for both 500 m (panel a and b) and
0.25<inline-formula><mml:math id="M102" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution (panel c and d) are shown.</p>
      <p id="d1e2299">By calibrating the model at 0.25<inline-formula><mml:math id="M103" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution, the FL simulated at
0.25<inline-formula><mml:math id="M104" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution agreed better with measurements for all biomes
(compare Figs. 2c, d and 5c, d). On the other hand, with this coarse
calibration, the 500 m resolution simulation significantly overestimated
FL and performed more poorly than the 0.25<inline-formula><mml:math id="M105" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution simulation in
terms of biome average and distribution (Fig. 5a and b). An exception was
the shrubland biome, for which all 0.25<inline-formula><mml:math id="M106" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> model pixels respective
to the field sites were strongly influenced by low-biomass areas in that
pixel. This resulted in a consistent underestimation of FL for both
calibration resolutions. For the 0.25<inline-formula><mml:math id="M107" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> calibration, the 500 m
resolution simulation still showed much better correlation with measurements
(<inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.57</mml:mn></mml:mrow></mml:math></inline-formula>), compared to the coarser simulation (<inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.07</mml:mn></mml:mrow></mml:math></inline-formula>).
The 0.25<inline-formula><mml:math id="M110" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> calibration led to a regression slope that was steeper
and closer to 1 for both resolutions, as high FL was amplified relative to
low FL.</p>
      <?pagebreak page4691?><p id="d1e2387">The increase in biomass and litter when using the 0.25<inline-formula><mml:math id="M111" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>
calibration led to higher emissions; 0.82 Pg C for both resolutions (Fig. 3, transparent bars). As expected, this was much closer to the estimate of 0.90 Pg C from GFED4 (without small fires) than for the 500 m calibrated model. The largest change in emissions was in the open and woody savanna biomes. The resemblance to GFED4 emissions suggests that our simplified model is able to roughly reproduce GFED4 when calibrated at the same resolution of 0.25<inline-formula><mml:math id="M112" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>, while additionally enabling 500 m
resolution modelling.<?xmltex \hack{\newpage}?></p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><?xmltex \currentcnt{6}?><label>Figure 6</label><caption><p id="d1e2412">Relative simulation difference as the natural logarithm of
0.25<inline-formula><mml:math id="M113" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> over 500 m resolution results for <bold>(a)</bold> AGBL and <bold>(b)</bold> fire
emissions (equivalent to FC). The 500 m resolution model results are
aggregated to 0.25<inline-formula><mml:math id="M114" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution beforehand. The relative difference
in emissions is equivalent to the difference in FC. Positive values show
0.25<inline-formula><mml:math id="M115" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> values higher than 500 m values and vice versa for
negative values.</p></caption>
          <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019-f06.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>Simulation differences due to spatial resolution</title>
      <p id="d1e2463">Besides calibration differences, model results varied because of resolution
differences during the simulations. We calculated simulation
differences between 500 m and 0.25<inline-formula><mml:math id="M116" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution runs, using the
model calibrated for 500 m resolution (Fig. 6). For the 0.25<inline-formula><mml:math id="M117" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>
resolution simulation, AGBw and AGBL estimates were 4.0 and 4.6 Pg C
lower than the 500 m simulation, respectively, with contributions from
all biomes (Fig. 7a). The main positive differences were found at the
transitions from barren to vegetated landscapes (e.g. at the fringes of the
Sahara and Kalahari) and from land to water (Fig. 6). Notably, smaller
positive differences were also found in the southern part of West Africa.
The average AGBL was lower at coarser resolution for all biomes, with a
larger difference for biomes with more biomass (Fig. 7b).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><?xmltex \currentcnt{7}?><label>Figure 7</label><caption><p id="d1e2486">Absolute simulation difference as 0.25<inline-formula><mml:math id="M118" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> minus 500 m
resolution results for <bold>(a)</bold> total AGBL and fire emissions and <bold>(b)</bold> area-average AGBL and FC (per area burned). Boxplots show the mean (coloured dots), median (horizontal line), 25th and 75th percentiles
(boxes), and the 5th and 95th percentiles (whiskers).</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019-f07.png"/>

        </fig>

      <p id="d1e2510">Total fire emissions for the 0.25<inline-formula><mml:math id="M119" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> run were 0.66 Pg C yr<inline-formula><mml:math id="M120" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
which was 3 % lower than the 500 m resolution simulation (Fig. 3,
solid orange versus blue bars). Even though the total emission estimates at
different resolutions were relatively similar, significant regional
differences in emissions occurred, with deviations of up to a factor of 1.5 and higher deviations (of up to a factor of 4) at the border of water bodies
and deserts (Fig. 6b). The lower emissions at 0.25<inline-formula><mml:math id="M121" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution were mostly
the result of lower emissions in savannas and other grass-dominated biomes,
whereas for tropical forests (i.e. the Congo Basin) and other forests, emissions
were higher (see also Fig. 7a and b). Note that the relative differences
shown for emissions are the same as for FC because the burned area is equal
for both resolutions.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><?xmltex \currentcnt{8}?><label>Figure 8</label><caption><p id="d1e2546">Relative simulation differences in AGBL for various isolated
mechanisms, as the natural logarithm of the 0.25<inline-formula><mml:math id="M122" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> model result over the 500 m model result. Panel <bold>(a)</bold> shows the isolated difference due to the
biome-specific parameter error, <bold>(b)</bold> the additional difference due to the input aggregation error, <bold>(c)</bold> the remaining difference related to fire processes, and <bold>(d)</bold> the remaining unexplained difference after subtraction of <bold>(a–c)</bold>. The 500 m resolution model results are aggregated to 0.25<inline-formula><mml:math id="M123" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019-f08.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS5">
  <label>3.5</label><title>Disentangling of mechanisms</title>
      <?pagebreak page4692?><p id="d1e2597">The results in Sect. 3.4 indicated that simulation differences were modest
at a continental scale but substantial at regional scales. The various
mechanisms that explain part of these differences were identified and
quantified by doing additional simulations with altered model
configurations and comparing them to the base model (see Sect. 2.5.2).<?xmltex \hack{\newpage}?></p>
<sec id="Ch1.S3.SS5.SSS1">
  <label>3.5.1</label><title>Simulation differences for AGBL</title>
      <p id="d1e2608">Figure 8 shows the contributions of several error mechanisms to the total
simulation difference in AGBL (shown in Fig. 6). Figure 8a and b depict the
contribution of the biome-specific parameter error and the input
aggregation error, respectively. Figure 8c and d show the remaining
simulation difference after subtraction of these two error mechanisms. More
specifically, Fig. 8c shows the part related to fire processes (by doing a
fire-off simulation), and Fig. 8d shows the unexplained remainder. The
effect of the MBF on AGBL was negligible and therefore not shown (but see
Fig. 10). This is because frequent fires are mainly found in areas dominated
by ground fires that only burn grass and litter, whereas AGBL is mostly
determined by stem biomass and thus mainly affected by canopy fires, which
are less frequent.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><?xmltex \currentcnt{9}?><label>Figure 9</label><caption><p id="d1e2613">Relative simulation differences in fire emissions (and FC) for
various isolated mechanisms, as the natural logarithm of the 0.25<inline-formula><mml:math id="M124" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>
model result over the 500 m model result. Panel <bold>(a)</bold> shows the isolated difference due to the biome-specific parameter error, <bold>(b)</bold> the additional difference due to the input aggregation error, <bold>(c)</bold> the difference accounted for by implementation of the modified burned fraction (MBF), and <bold>(d)</bold> the remaining unexplained difference after subtraction of <bold>(a–c)</bold>. The 500 m
resolution model results are aggregated to 0.25<inline-formula><mml:math id="M125" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution.</p></caption>
            <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019-f09.png"/>

          </fig>

      <p id="d1e2656">Errors due to biome-specific parameters played a very substantial role in
the base model simulation difference in AGBL (Fig. 8a). For most of the
African continent the majority of difference could be explained by this
mechanism. The biome-specific parameter error accounted for lower AGBL for
grass-dominated biomes and higher AGBL for forest-dominated biomes at
coarser resolution. This shows that this error mechanism does not explain
the strong negative difference in the tropics in the total difference (Fig. 6a). Differences were strongest at the transition borders of biomes, where
the distribution of land cover types is generally more heterogeneous.
Examples are the transition of open savanna to woody savanna towards the
Equator (at 10<inline-formula><mml:math id="M126" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N and 15<inline-formula><mml:math id="M127" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S latitude), the transition of
woody savanna to tropical forest towards the Equator (at 5<inline-formula><mml:math id="M128" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N and
5<inline-formula><mml:math id="M129" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S latitude), and the transition towards the Sahara Desert (Fig. 4b).</p>
      <p id="d1e2696">Figure 8b shows the simulation differences in AGBL due to the input
aggregation error. Compared to the biome-specific parameter error, the input
aggregation error was relevant in other areas, and the two error mechanisms
partly<?pagebreak page4693?> neutralized each other (opposite signs in Fig. 8a and b). Substantial
negative differences were found at the transitions to forest biomes (e.g.
Congo rainforest, eastern South Africa, Madagascar). Positive differences
were found at the transition to deserts and water bodies. Further
investigation showed that these large positive differences occur where the
majority-aggregated biome is water or desert, leading to large relative
differences due to near-zero biomass. The remainder of simulation difference
in AGBL, after subtraction of the biome-specific parameter error and input
aggregation error, was mixed positive and negative, of which all negative
difference could be attributed to fire processes (Fig. 8c and d). This
negative difference in the tropics explained a large part of the total
simulation difference in that region (Fig. 8c, compare to Fig. 6a). This
leaves an unexplained simulation difference of solely positive values,
analogous to an overestimation of AGBL in the 0.25<inline-formula><mml:math id="M130" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution
simulation.</p>
      <p id="d1e2708">Because the various error mechanisms influence each other, the order of
isolation of different mechanisms affected the resulting relative
difference. This was especially the case for the isolation of fire-related
error mechanism, for which the relative difference could vary by up to
25 % difference dependent on the order of isolation. This was the case
because the input aggregation error accounted for a part of the negative
fire-related difference in the woody savannas and the tropical forest edge
(note overlapping negative pattern in Fig. 8b and c), and the biome-specific
parameter error accounted for a positive part in the open savannas. For the
other<?pagebreak page4694?> mechanism, MBF, the order of isolation had a negligible impact.</p>
</sec>
<sec id="Ch1.S3.SS5.SSS2">
  <label>3.5.2</label><title>Simulation differences for fire emissions</title>
      <p id="d1e2719">The results shown above concerned simulation differences in AGBL, which
directly dictates the fuel load available for burning and is thus a key
precursor for fire emissions. The simulation differences in emission were
generally less pronounced than for AGBL (Fig. 9). The biome-specific
parameter error was pronounced as a dipole of positive and negative
difference around biome transitions (Fig. 9a), similar to the pattern seen
for AGBL. The difference due to the input aggregation error was mostly
positive (Fig. 9b) and partly neutralized the biome-specific parameter
error.</p>
      <p id="d1e2722">The isolated error related to the MBF was negative everywhere and accounted
for a substantial part of the total simulation difference in savanna regions
(Fig. 9c). This shows that this measure is indeed able to remove errors at
aggregated resolutions related to short fire return intervals, as reasoned
by van der Werf et al. (2017). The traditional way of accounting for fire in a
model (unmodified burned fraction) causes an underestimation of emissions at
aggregated resolutions in frequently burning landscapes, which translates to
a negative simulation difference as shown in Fig. 9c. The remainder of
simulation difference in emissions, after subtraction of all identified
error mechanisms, was predominantly positive, especially in the region of
the Congo tropical rainforest (Fig. 9d).</p>
</sec>
<sec id="Ch1.S3.SS5.SSS3">
  <label>3.5.3</label><title>Relative contribution of error mechanisms</title>
      <p id="d1e2733">For all biomes, we identified the error mechanisms that explain the majority
of total simulation difference in AGBL and emissions, except for tropical
forest emissions (Fig. 10). From the <inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.08</mml:mn></mml:mrow></mml:math></inline-formula> average relative difference in
AGBL (blue<?pagebreak page4695?> square in Fig. 10) for Africa between the base model simulated at 0.25<inline-formula><mml:math id="M132" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> versus 500 m resolution, 47 % could be attributed to
biome-specific parameter errors and an additional 2 % to input aggregation errors. Furthermore, 16 % was related to fire, 5 % to the MBF, and the remaining 30 % was unexplained. This analysis was also performed for emissions, showing that from the <inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.01</mml:mn></mml:mrow></mml:math></inline-formula> average relative difference (orange square in Fig. 10) between the base model running at 0.25<inline-formula><mml:math id="M134" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> versus 500 m resolution, 30 % could be attributed to biome-specific parameter errors and an additional 15 % to input aggregation errors. The MBF accounted for 22 %, and 33 % remains unexplained.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10" specific-use="star"><?xmltex \currentcnt{10}?><label>Figure 10</label><caption><p id="d1e2776">Relative simulation difference in AGBL and fire emissions for
sub-Saharan Africa and for individual biomes, as the natural logarithm of the 0.25<inline-formula><mml:math id="M135" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> model result over the 500 m model result. Stacked bars
depict the contribution of various error mechanisms to the overall
resolution difference in AGBL and fire emissions by successive isolation of
the biome-specific parameter error, the input aggregation error, the MBF, and
finally the remaining difference related to fire (“Fire rest”). Furthermore,
the unexplained remainder after removal of all identified mechanisms is
shown (“Unexplained”).</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019-f10.png"/>

          </fig>

      <p id="d1e2794">On a biome level, most of the simulation differences were explained by
biome-specific parameter errors. For AGBL, this mechanism explained the
large majority of difference for the grass-dominated biomes. For
tree-dominated biomes, input aggregation errors and fire processes were more
important instead. For most biomes, various error mechanisms partly
neutralized each other, resulting in a reduced overall difference. The MBF
mostly affected emissions, and as expected the contribution was largest for
biomes with considerable burned area and frequent fires. The unexplained
remaining difference was positive for all biomes, and only the emission
differences for the grassland and cropland biomes were fully explained.</p>
</sec>
<sec id="Ch1.S3.SS5.SSS4">
  <label>3.5.4</label><title>Simulation difference as a function of resolution</title>
      <p id="d1e2806">Across the four analysed spatial resolutions (0.250,
0.125, 0.050<inline-formula><mml:math id="M136" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>, 500 m (which we assume to be
0.005<inline-formula><mml:math id="M137" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> for this comparison)), the absolute differences in AGBL and
emissions followed a gradual trend described by a natural logarithmic
function. Exceptions were the difference in cropland AGBL and in woody
savanna emissions. The absence of a logarithmic trend in these cases was
caused by a mixture of pixels with positive and negative differences within
the biome. This<?pagebreak page4696?> suggests that for these biomes the trend is explained by a
combination of concave upward and downward logarithms for different pixels,
as a result of variability within the biome. In the case of emissions, the
absence of a logarithmic trend for the whole of sub-Saharan Africa reflected
the pattern of woody savannas. We estimated the sensitivity of the
simulation difference as the derivative of the fit function. The general
form of the fit function is
              <disp-formula id="Ch1.E7" content-type="numbered"><label>7</label><mml:math id="M138" display="block"><mml:mrow><mml:mi>a</mml:mi><mml:mi>log⁡</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>+</mml:mo><mml:mi>b</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mi>c</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M139" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> is the spatial resolution in degrees and <inline-formula><mml:math id="M140" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M141" display="inline"><mml:mi>b</mml:mi></mml:math></inline-formula>, and <inline-formula><mml:math id="M142" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula> are
constants. Given the logarithm quotient rule,
              <disp-formula id="Ch1.E8" content-type="numbered"><label>8</label><mml:math id="M143" display="block"><mml:mrow><mml:mi>a</mml:mi><mml:mi>log⁡</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mi>b</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mi>a</mml:mi><mml:mi>log⁡</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mi>b</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>a</mml:mi><mml:mi>log⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mi>b</mml:mi></mml:mrow><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mi>b</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            and assuming <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:mi>b</mml:mi><mml:mo>≪</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:math></inline-formula>, each 2-fold increase or decrease in resolution
results in a constant change in simulation difference. For example, the
sensitivity for open-savanna emissions is roughly <inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.17</mml:mn><mml:mo>⋅</mml:mo><mml:mi>log⁡</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.81</mml:mn></mml:mrow></mml:math></inline-formula> g C m<inline-formula><mml:math id="M146" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> per 2-fold change in resolution (increase or
decrease) (see Fig. 11b). This implies that, independent of the initial
resolution, a 2-fold finer (coarser) spatial resolution always leads to the
same decrease (increase) in simulation difference. In other words, both at
fine and coarse resolutions the model results are equally sensitive to
resolution changes. Importantly, in cases where <inline-formula><mml:math id="M147" display="inline"><mml:mi>b</mml:mi></mml:math></inline-formula> is not much smaller than
<inline-formula><mml:math id="M148" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, the sensitivity decreases towards finer resolution (e.g. for tropical
forest emissions).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11" specific-use="star"><?xmltex \currentcnt{11}?><label>Figure 11</label><caption><p id="d1e3019">Average absolute simulation difference per biome compared to
500 m for <bold>(a)</bold> AGBL and <bold>(b)</bold> fire emissions versus spatial resolution. Data points are fitted with a natural logarithmic function where applicable. Inserted formulas show the corresponding fit functions for the two outermost lines. The plot axes are linear. For this plot, we assumed that 500 m spatial resolution equals 0.005<inline-formula><mml:math id="M149" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> on the <inline-formula><mml:math id="M150" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> axis.</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019-f11.png"/>

          </fig>

</sec>
</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Discussion</title>
      <p id="d1e3060">We estimated fire emissions of 0.68 Pg C yr<inline-formula><mml:math id="M151" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for sub-Saharan Africa
using an emission model based on native MODIS satellite spatial resolution
of 500 m. These relatively high-resolution estimates were compared to
coarser resolutions, as used for most previous fire emission estimates such
as from GFED and fire modules in DGVMs (Rabin et al., 2017). We analysed
differences due to spatial resolution occurring in both the calibration and
simulation stage of our model.</p>
      <p id="d1e3075">With our simplified emission model, we were able to reproduce emissions from
GFED4 on a continental and biome scale (Fig. 3). However, emissions for
sub-Saharan Africa based on our 500 m resolution model were 0.22 Pg C yr<inline-formula><mml:math id="M152" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> lower (<inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">24</mml:mn></mml:mrow></mml:math></inline-formula> %) than GFED4, with the largest difference for woody savannas. The difference with GFED4s emissions was larger because our model did not include small-fire burned area. The emission estimates for our model calibrated at 0.25<inline-formula><mml:math id="M154" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution were 0.14 Pg C yr<inline-formula><mml:math id="M155" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> higher than for the 500 m version and more in line with GFED4 (<inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:math></inline-formula> %). Comparison of the 500 m and 0.25<inline-formula><mml:math id="M157" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution model
calibrations illustrated that turnover rates governing biomass turnover and
decomposition were required to be slower at aggregated resolution under the calibration approach used, which led to higher fuel load and consequently
higher emissions. This suggests that GFED likely overestimates fuel
consumption<?pagebreak page4697?> due to its relatively coarse model resolution for similar
reasons.</p>
      <p id="d1e3141">The lower fuel consumption estimates and underlying faster turnover rates
for the 500 m calibrated model version compared to the 0.25<inline-formula><mml:math id="M158" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>
resolution version, can partly be explained by a smaller representation
error when comparing model to field measurements. We showed that at
500 m spatial resolution the representation error for model pixels
compared to individual field measurements was greatly reduced, especially in
heterogeneous landscapes with large spatial variation in biomass. The
improved resolution additionally led to a larger sample of usable
measurements because multiple field plots that would otherwise be located
in one 0.25<inline-formula><mml:math id="M159" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> pixel could be compared individually. However, also
at 500 m resolution, part of the representation error remains, mostly
because of the uncertainty in field plot location and time. Furthermore, the
comparison to field measurements at finer resolution demands increased model
complexity, since small-scale heterogeneity is no longer averaged out and
thus has to be represented in the model.</p>
      <p id="d1e3162">When comparing our 0.25<inline-formula><mml:math id="M160" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> calibrated resolution model version to
GFED4, which runs at the same resolution, we found that the turnover rates
governing biomass turnover and decomposition in our model were generally
faster, despite the emission estimates being relatively smaller. This can
partly be explained by the simplifications made in our model when compared
to GFED4, such as the absence of herbivory, grazing, fuelwood collection, and
explicit deforestation mechanisms – all processes that remove additional
biomass. Furthermore, because GFED4 is optimized globally and not only for
Africa, turnover rates can be different for the same biome across
continents. Lehmann et
al. (2014) and Rogers et al. (2015) for example,
discussed the differences in vegetation and fire characteristics among
continents. This is also influenced by the availability of field data per
continent, which is relatively poor for Africa. Finally, the faster turnover
rates for the litter pools in particular can also be explained by the use of
different soil moisture data and subsequent parameterization of litter
decomposition in our model. Indeed, the effective turnover rates (i.e. after
scaling by the abiotic scalar) for litter were slower and closer to GFED4
(Table 1). We have optimized our modelled AGBw to agree with the dataset
developed by Avitabile et al. (2016) (see Sect. 2.3). However,
Bouvet et al. (2018) showed large
negative biases in this dataset for savanna biomes, which suggests savanna
stem turnover rates tend to be too fast in both our model and GFED4. This
indicates that additional field data on biome-specific biomass and turnover
rates are required to better evaluate our model.</p>
      <p id="d1e3175">Compared to the calibration difference in emissions of 0.14 Pg C yr<inline-formula><mml:math id="M161" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, the simulation difference in emissions of 0.02 Pg C yr<inline-formula><mml:math id="M162" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> was much smaller. Regionally however, simulation differences in AGBL and emissions were substantial (Fig. 6). At aggregated resolution, AGBL was lower almost everywhere, and emissions were higher in the 10<inline-formula><mml:math id="M163" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N to 10<inline-formula><mml:math id="M164" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S belt but lower in the surrounding latitudes. In order to explain these differences, we identified at least three error mechanisms that can amplify
or dampen each other: (1) biome-specific parameter error, (2) input
aggregation error, and (3) temporal effects due to aggregation of burned area
fractions specifically, as spatial averaging affects sub-grid fire return
interval (MBF) and fuel build-up rates after a fire (post-fire fuel
recovery, explained below).</p>
<?pagebreak page4698?><sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Biome-specific parameter error</title>
      <p id="d1e3227">Overall, most of the simulation difference stemmed from the use of
biome-specific parameters, especially where they varied considerably between
biomes. In our model, the turnover rates were particularly variable, and
they varied among biomes for all biomass pools. In contrast, in GFED4 only
the stem pool turnover rates are set to biome-specific values, which we
expect to result in relatively small errors. The biome-specific parameter
error was largest in aggregate grid cells with a large sub-grid
heterogeneity in land cover types and a large gradient in parameter values
between neighbouring pixels. Isolation of this error mechanism showed the
largest AGBL differences in biome transition regions, where the variation in
biomes is highest (Fig. 8a). Lower AGBL at 0.25<inline-formula><mml:math id="M165" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution for
grass-dominated regions is explained by the misclassification of grid cell
minority forest patches as grassland. At coarse resolution, average biomass
is underestimated because the whole grid cell is simulated as a grassland
(the majority biome), whereas at finer resolution the presence of a forest
is revealed, with accompanying different turnover rates and LUE. Conversely,
higher AGBL at a 0.25<inline-formula><mml:math id="M166" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution for tree-dominated regions is
explained by the misclassification of grid cell minority grassland as
forest. This is comparable to previous studies that found an underestimation
of small fragmented burned or forest area and an overestimation of large
homogeneous burned or forest area, as a result of majority-based aggregation
of binary classified pixels to coarser resolution
(Eva and Lambin, 1998; Miettinen and Liew, 2009; Nelson et al., 2009; Silva et al., 2005).</p>
      <p id="d1e3248">The biome-specific parameter error in AGBL was mostly related to stem
biomass because AGBL mostly consisted of stem biomass and because the stem
pool had the largest range of turnover rates. The stem turnover rates for
the open and woody savanna biomes differed by a factor of 7, which explains
the notably large biome-specific parameter errors at transitions between
those biomes, such as around the 10<inline-formula><mml:math id="M167" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N and 15<inline-formula><mml:math id="M168" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S
latitudes (Fig. 8a). The large negative differences on the eastern flank of
the continent are also likely explained by a combination of the heterogenic
mosaic of agriculture, savannas, and forest biomes and thus a large variability
in tree cover and related turnover rates in this region. However, the error
can similarly be significant for biomass pools other than the stem pool,
since other turnover rates varied with up to a factor of 4 (see Table 1).
This is especially important in biomes with little tree cover.</p>
      <p id="d1e3269">The biome-specific parameter error in AGBL directly affected emissions by
determining the amount of fuel and consequently again AGBL via the removal
of fuel. However, for most pixels the relative difference in emissions was
smaller than in AGBL (Fig. 9). Compared to 500 m resolution, running the
model at 0.25<inline-formula><mml:math id="M169" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution generally increased emissions in
tropical forests and decreased emissions in savannas. A small area of
grassland burning in an area predominately covered with forest results in an
overestimation of emissions at aggregated resolutions, since the grid cell
average fuel load is mostly determined by forest biomass. The resulting
emissions resemble a misclassified forest fire, instead of the actual grass
fire. By contrast, the burning of a small patch with high fuel load
surrounded by a majority of low fuel load leads to an underestimation of
emissions at coarse resolution. For these reasons, Fig. 9a shows
positive–negative dipole patterns around the biome transitions. Emissions
were overestimated on the more forested side of each biome transition and
underestimated on the grassier side of each transition. These patterns were
the direct result of the biome-specific parameter error in AGBL (Fig. 8a).
There were no biome-specific parameters for fire, so no additional error was
introduced in the calculation of emissions from AGBL. Notably, the relative
error for emissions was much smaller than for AGBL. This can be explained by
the fact that AGBL was mostly determined by stem biomass, whereas emissions
were mostly determined by grass and litter (and leaf) biomass.</p>
      <p id="d1e3281">We expect that the AGBL after a fire is only minorly influenced by the
biome-specific parameter error in emissions. Since most emissions originate
from grass fires, there is a minor impact on stem biomass and thus AGBL.
This is also indicated by the absence of an emission-like pattern in Fig. 9a, suggesting that this error in emissions is small where emissions are
significant. By performing a simulation without fire-induced tree mortality,
we established that virtually all fire-related resolution difference in AGBL
(Fig. 8c) is caused by mortality, instead of by direct emissions. Fire
mostly affects AGBL by killing trees, but this does not directly translate
to emissions because there is a time lag in the combustion of dead stems
(i.e. cwd) and the CC is relatively low.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Input aggregation error</title>
      <p id="d1e3292">The non-linear behaviour of the model algorithm led to an additional input
aggregation error because of Jensen's inequality. This error was largest for
input data with high spatial variability and thus most apparent in grid
cells with large heterogeneity in land cover types, where the bias due to
averaging is strongest. Previously, we identified fire-induced tree
mortality to be the main reason for the fire-isolated resolution difference
in AGBL (Fig. 8c). This pattern is clearly resembled in Fig. 8b, which
suggests that mortality is strongly affected by the input aggregation error.
This can be explained by the quadratic factor in calculating mortality,
which amplifies Jensen's inequality because of increased non-linearity.</p>
      <p id="d1e3295">By aggregating the input data for each biome separately, the input
aggregation error was reduced by decreasing the variability related to the
heterogeneity in land cover types. Using this method, the spatial resolution
was effectively increased by a factor roughly equal to the number of biomes.
However, variability inside individual biomes remains and is not accounted
for using this approach and likely accounts for the remaining unexplained
simulation difference (Yuan et al., 2007). Besides biomes, more or other aggregation classes<?pagebreak page4699?> can be chosen that ideally
reduce the variability within those classes as much as possible with as
few classes as possible. This could for example be a division based on
tree cover intervals. However, the input aggregation error is unavoidable
when modelling at aggregated resolutions, unless an appropriate estimator
for Jensen's inequality can be derived to account for this error. Since the
reanalysis climate datasets we used had a 0.25<inline-formula><mml:math id="M170" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution for
both our coarse- and fine-resolution simulations, no additional input
aggregation error was introduced by these input datasets. However, in the case of finer-resolution climate data being aggregated, Jensen's inequality will exist
for these datasets as well. We aim to substitute all remaining coarse-resolution input data with finer-resolution data when available, e.g. by
using data from ERA5 (Hersbach and Dee, 2016). The error will
probably be less substantial, as climate data are generally smoother and more
homogeneous spatially.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Burned area aggregation (temporal effects)</title>
      <p id="d1e3315">The aggregation of BA fractions to coarser resolution in particular led to
additional errors, owing to temporal mechanisms. Firstly, the aggregation of
BA altered fire return intervals, resulting in an underestimation of
emissions at aggregated resolutions, especially in frequently burning areas.
In GFED4, van der Werf et al. (2017) accounted for this effect by introducing the MBF. With our 500 m resolution model, we were able to demonstrate the
effectiveness of the MBF. Indeed, the MBF (Fig. 9c) accounted for the
majority of underestimation in emissions at aggregated resolution,
especially in frequently burning areas (mostly savannas).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F12"><?xmltex \currentcnt{12}?><label>Figure 12</label><caption><p id="d1e3320">Typical stem biomass growth curve.</p></caption>
          <?xmltex \igopts{width=199.169291pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/12/4681/2019/gmd-12-4681-2019-f12.png"/>

        </fig>

      <p id="d1e3329">We introduce a second mechanism related to this, which occurs due to the
temporal non-linearity of the modelled biomass build-up. This is a case of
Jensen's inequality in the temporal dimension. The effect is illustrated in
Fig. 12 for a hypothetical case of stem biomass build-up. For this example,
we assumed 100 % CC and a uniform fuel load. At 500 m resolution, the
burned fraction is binary; a pixel is either completely burned or
unaffected. In the case of a pixel burning, all stem biomass is removed by this
hypothetical fire. In the next month, the biomass regrows from the start of
the regrowth curve, where the slope is relatively steep, which leads to fast
regrowth. By contrast, in the case of aggregated burned fractions the
same net amount of biomass is removed from the grid cell, but only a
fraction of the total biomass. This results in slower regrowth from a later
point on the regrowth curve. This leads to an underestimation of fuel load
at coarse resolution, due to slower biomass regrowth on average after a
fire. Even though in normal model scenarios with partial CC the effect would
be less extreme, it could still be of importance, especially in the case of
canopy fires. In general, the effect is stronger for slow turnover rates and
short fire return intervals. In the case of a grass fire, most biomass has
already recovered in the first months after the fire. Only in the case of a
short fire return interval could an effect on emissions be noticeable. However,
additional analysis is required to quantify the contribution of this error
mechanism.</p>
</sec>
<sec id="Ch1.S4.SS4">
  <label>4.4</label><title>Small fires</title>
      <p id="d1e3340">We found that emissions were in total lowered by 0.14–0.02 <inline-formula><mml:math id="M171" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.12 Pg C yr<inline-formula><mml:math id="M172" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (calibration minus simulation difference) when increasing model resolution from 0.25<inline-formula><mml:math id="M173" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> to 500 m resolution. For these results, we have relied solely on MCD64A1 burned area dataset which did not account for small-fire burned area. Therefore, this difference may be offset by an increase in emissions due to the inclusion of small fires. In GFED4s, emissions increased by 0.36 Pg C yr<inline-formula><mml:math id="M174" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in our study region due to small fires, as compared to GFED4. An equivalent increase in emissions due to small fires in our model would offset the effects of spatial resolution 3-fold. However, our findings suggest that in a 500 m resolution model the inclusion of small fires may affect emissions differently. In GFED4s, small-fire burned area is added to the MCD64A1 product burned area (Collection 5.1), followed by the calculation of emissions at a 0.25<inline-formula><mml:math id="M175" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution as in GFED4. However, small fires mostly occur in croplands and at the border of tropical forests (i.e. deforestation), where the land cover is particularly heterogeneous
(Randerson et al., 2012; van der Werf et al., 2017). Consequently, the GFED4s approach for calculating small fire emissions is prone to the error mechanisms that occur at coarse resolution as described in this work. Our results suggest that small fire emission estimates, in particular, should be modelled at a finer resolution or at least on a per-biome basis.</p>
      <p id="d1e3392">This is especially relevant considering the ongoing development towards
finer-resolution burned area products. For example, Hawbaker et al. (2017) published a 30 m resolution burned area dataset for North America based on Landsat imagery. Furthermore,
Roteta et al. (2019) developed a dataset of 20 m resolution burned area for
Africa derived from the Sentinel-2 MultiSpectral Instrument (MSI) sensor. Their preliminary product
assessment indicated that a very substantial amount of burned area is still
missed, even in GFED4s which includes small fires using a statistical
approach. Our work<?pagebreak page4700?> illustrates how the development of finer-resolution
burned area datasets should be accompanied by the development of finer-resolution emission models or better parameterizations in order to reduce
errors. Even in our 500 m resolution emission model, sub-500 m
heterogeneity in burned area and fuel load is not accounted for and could
introduce additional errors.</p>
      <p id="d1e3395">We have shown that for relatively fine spatial resolution, the model was
roughly equally sensitive to resolution changes and coarser resolution
(Fig. 11). The natural log relation implied that a 2-fold increase in
resolution leads to a linear reduction in error. However, sub-500 m
modelling of fire emission could reveal new sources of error related to
small-scale heterogeneity. At these scales the log relation might no longer
be applicable. Dependent on the model precision demands, an optimal spatial
resolution can be chosen for which the simulation difference becomes
insignificant. However, the calibration difference can still be substantial,
dependent on the representation error. A study by Nelson et al. (2009), who looked at the effect of spatial resolution on forest inventories, concluded that there is an optimal resolution of around 300 m at which the pixel size is slightly smaller than the forest patch size and the essential heterogenic
characteristics of the landscape are captured. In line with our findings,
this suggests there is a similar optimal resolution for burned area, and
other spatial data used in fire emission modelling, at which finer
resolution no longer significantly improves captured variability in the
data used and computational resources are optimized.</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Conclusions</title>
      <p id="d1e3408">We have developed a carbon cycle model to estimate fire emissions for
sub-Saharan Africa, using the native spatial resolution of MODIS data (500 m). A key objective was to compare fire emission estimates at 500 m
resolution with the coarser resolutions used more often such as the
0.25<inline-formula><mml:math id="M176" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution of GFED4. We estimated total fire emissions for
sub-Saharan Africa of 0.68 Pg C yr<inline-formula><mml:math id="M177" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> averaged over 2002–2017. This is 24 % lower than the most recent estimates from GFED4 (without small
fires).</p>
      <p id="d1e3432">The difference was mainly caused by reduced representation errors in model
calibration at finer resolution, when tuning the model to match field
measurements of fuel load. In addition, estimates were different dependent
on the resolution of the model simulation. At a more local scale, these
simulation differences were substantial, with differences up to a factor 4
in regions with large landscape heterogeneity, such as biome transition
zones. The error mechanisms we identified as main contributors to these
simulation differences are all the result of spatial aggregation of the
datasets used and the consequent coarse-resolution model simulation.
Spatial aggregation leads to a reduction in data variability, both in the case of majority-based aggregation of land cover types and in the case of
average-based aggregation of all other, continuous, input data. The
identified error mechanisms explained most of the simulation difference, and
the remaining unexplained difference is most likely caused by the
variability inside individual biomes, which was not accounted for in our
method. This variability can only be fully accounted for by running the
model at native resolution. However, our study of error mechanisms also
illustrates that a large share of these errors can be accounted for by
improved parameterizations and error reduction measures. Furthermore,
temporal effects, such as differences in post-fire fuel recovery, may also
explain part of the remaining difference. These temporal effects should be
further investigated.</p>
      <p id="d1e3435">As a next step, we plan to run our model for the globe to improve global
emission estimates, with a focus on highly heterogeneous regions such as
deforestation zones. Understanding the underlying mechanisms that create
errors in coarse-resolution models enables the development of error
reduction measures. This knowledge can be used to improve the next version
of GFED. Our results indicate that fuel consumption in GFED may be
overestimated, at least for Africa. Whether correcting for the
resolution-dependent errors discussed in this work will lead to lower global
emissions in the next version of GFED depends on to the extent to which small-fire
burned area may offset the decline in emissions.</p>
</sec>

      
      </body>
    <back><notes notes-type="codedataavailability"><title>Code and data availability</title>

      <p id="d1e3442">Model code is available as supplement and model results are available upon request. GFED4s data are publicly available at
<uri>https://www.globalfiredata.org/</uri> (last access: 30 October 2019).</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d1e3448">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/gmd-12-4681-2019-supplement" xlink:title="pdf">https://doi.org/10.5194/gmd-12-4681-2019-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e3457">The research was designed by GRvdW and DvW. DvW performed all analyses and wrote the paper with contributions from GRvdW.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e3463">The authors declare that they have no conflict of interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e3469">We would like to thank Ioannis Bistinas and the GFED team for useful discussions, Louis Giglio for providing the MCD64A1 burned area data, and Tom Eames for proof-reading.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e3474">This research has been supported by the Netherlands organization for Scientific Research (NWO) (Vici scheme research programme, no. 016.160.324).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <?pagebreak page4701?><p id="d1e3480">This paper was edited by Jason Williams and reviewed by João Silva and one anonymous referee.</p>
  </notes><ref-list>
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    <!--<article-title-html>Modelling biomass burning emissions and the effect of spatial resolution: a case study for Africa based on the Global Fire Emissions Database (GFED)</article-title-html>
<abstract-html><p>Large-scale fire emission estimates may be influenced by
the spatial resolution of the model and input datasets used. Especially in
areas with relatively heterogeneous land cover, a coarse model resolution
might lead to substantial errors in estimates. We developed a
model using MODerate resolution Imaging Spectroradiometer (MODIS) satellite
observations of burned area and vegetation characteristics to study the
impact of spatial resolution on modelled fire emission estimates. We
estimated fire emissions for sub-Saharan Africa at 500&thinsp;m spatial
resolution (native MODIS burned area) for the 2002–2017 period, using a
simplified version of the Global Fire Emissions Database (GFED) modelling
framework, and compared this to model runs at a range of coarser resolutions
(0.050, 0.125, 0.250°). We estimated fire
emissions of 0.68&thinsp;Pg&thinsp;C&thinsp;yr<sup>−1</sup> at 500&thinsp;m resolution and 0.82&thinsp;Pg&thinsp;C&thinsp;yr<sup>−1</sup> at 0.25° resolution; a difference of 24&thinsp;%. At
0.25° resolution, our model results were relatively similar to
GFED4, which also runs at 0.25° resolution, whereas our 500&thinsp;m
estimates were substantially lower. We found that lower emissions at finer
resolutions are mainly the result of reduced representation errors when
comparing modelled estimates of fuel load and consumption to field
measurements, as part of the model calibration. Additional errors stem from
the model simulation at coarse resolution and lead to an additional 0.02&thinsp;Pg&thinsp;C&thinsp;yr<sup>−1</sup> difference in estimates. These errors exist due to the aggregation of quantitative and qualitative model input data; the average-
or majority- aggregated values are propagated in the coarse-resolution
simulation and affect the model parameterization and the final result. We
identified at least three error mechanisms responsible for the differences
in estimates between 500&thinsp;m and 0.25° resolution simulations,
besides those stemming from representation errors in the calibration
process, namely (1) biome misclassification leading to errors in
parameterization, (2) errors due to the averaging of input data and the
associated reduction in variability, and (3) a temporal mechanism related to
the aggregation of burned area in particular. Even though these mechanisms
largely neutralized each other and only modestly affect estimates at a
continental scale, they lead to substantial error at regional scales with
deviations of up to a factor 4 and may affect large-scale estimates
differently for other continents. These findings could prove valuable in
improving coarse-resolution models and suggest the need for increased
spatial resolution in global fire emission models.</p></abstract-html>
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