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  <front>
    <journal-meta><journal-id journal-id-type="publisher">GMD</journal-id><journal-title-group>
    <journal-title>Geoscientific Model Development</journal-title>
    <abbrev-journal-title abbrev-type="publisher">GMD</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Geosci. Model Dev.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1991-9603</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/gmd-10-4647-2017</article-id><title-group><article-title>Effectiveness and limitations of parameter tuning in reducing biases of
top-of-atmosphere radiation and clouds in MIROC version 5</article-title>
      </title-group><?xmltex \runningtitle{Effectiveness and limitations of parameter tuning}?><?xmltex \runningauthor{T.~Ogura et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Ogura</surname><given-names>Tomoo</given-names></name>
          <email>ogura@nies.go.jp</email>
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Shiogama</surname><given-names>Hideo</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Watanabe</surname><given-names>Masahiro</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Yoshimori</surname><given-names>Masakazu</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-0236-8442</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Yokohata</surname><given-names>Tokuta</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7346-7988</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Annan</surname><given-names>James D.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Hargreaves</surname><given-names>Julia C.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Ushigami</surname><given-names>Naoto</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Hirota</surname><given-names>Kazuya</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Someya</surname><given-names>Yu</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6176-3664</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Kamae</surname><given-names>Youichi</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-0461-5718</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff7">
          <name><surname>Tatebe</surname><given-names>Hiroaki</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-2265-5847</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Kimoto</surname><given-names>Masahide</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>National Institute for Environmental Studies, Tsukuba, Ibaraki, Japan</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Atmosphere and Ocean Research Institute, University of Tokyo, Kashiwa, Chiba, Japan</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Faculty of Environmental Earth Science, Global Institution for
Collaborative Research and Education, and Arctic Research Center, Hokkaido University, Sapporo, Hokkaido, Japan</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>BlueSkiesResearch.org.uk, Settle, North Yorkshire, UK</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan</institution>
        </aff>
        <aff id="aff7"><label>7</label><institution>Japan Agency for Marine-Earth Science and Technology, Yokohama, Kanagawa, Japan</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Tomoo Ogura (ogura@nies.go.jp)</corresp></author-notes><pub-date><day>21</day><month>December</month><year>2017</year></pub-date>
      
      <volume>10</volume>
      <issue>12</issue>
      <fpage>4647</fpage><lpage>4664</lpage>
      <history>
        <date date-type="received"><day>10</day><month>May</month><year>2017</year></date>
           <date date-type="rev-request"><day>21</day><month>June</month><year>2017</year></date>
           <date date-type="rev-recd"><day>27</day><month>October</month><year>2017</year></date>
           <date date-type="accepted"><day>9</day><month>November</month><year>2017</year></date>
      </history>
      <permissions>
        
        
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 3.0 Unported License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/3.0/">https://creativecommons.org/licenses/by/3.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017.html">This article is available from https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017.html</self-uri><self-uri xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017.pdf">The full text article is available as a PDF file from https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017.pdf</self-uri>
      <abstract>
    <p id="d1e229">This study discusses how much of the biases in top-of-atmosphere (TOA)
radiation and clouds can be removed by parameter tuning in the present-day
simulation of a climate model in the Coupled Model Inter-comparison Project
phase 5 (CMIP5) generation. We used output of a perturbed parameter ensemble
(PPE) experiment conducted with an atmosphere–ocean general circulation
model (AOGCM) without flux adjustment. The Model for Interdisciplinary
Research on Climate version 5 (MIROC5) was used for the PPE experiment.
Output of the PPE was compared with satellite observation data to evaluate
the model biases and the parametric uncertainty of the biases with respect to
TOA radiation and clouds. The results indicate that removing or changing the
sign of the biases by parameter tuning alone is difficult. In particular, the
cooling bias of the shortwave cloud radiative effect at low latitudes could
not be removed, neither in the zonal mean nor at each latitude–longitude
grid point. The bias was related to the overestimation of both cloud amount
and cloud optical thickness, which could not be removed by the parameter
tuning either. However, they could be alleviated by tuning parameters such as
the maximum cumulus updraft velocity at the cloud base. On the other hand,
the bias of the shortwave cloud radiative effect in the Arctic was sensitive
to parameter tuning. It could be removed by tuning such parameters as albedo
of ice and snow both in the zonal mean and at each grid point. The obtained
results illustrate the benefit of PPE experiments which provide useful
information regarding effectiveness and limitations of parameter tuning.
Implementing a shallow convection parameterization is suggested as a
potential measure to alleviate the biases in radiation and clouds.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p id="d1e239">The climate models used in Coupled Model Inter-comparison
Project phase 5 (CMIP5) still exhibit significant biases in simulating
present-day top-of-atmosphere (TOA) radiation, as in CMIP3 (Flato et
al., 2013). The biases are especially large in the component of the shortwave
cloud radiative effect (SCRE), namely the difference in shortwave radiation
between all-sky and clear-sky values. The SCRE represents the radiative
effect of clouds, which cool the climate system by reflecting shortwave
radiation. Compared with satellite observations, however, the cooling effect
of the SCRE tends to be overestimated over low-latitude oceans and
underestimated over the Southern Ocean, suggesting that the models still have
difficulties in simulating clouds in these regions (Nam et al., 2012;
Bodas-Salcedo et al., 2014). Previous studies suggest that such biases in
radiation and clouds might affect the simulated climate in remote regions or
distort the cloud feedback in future projections (Trenberth and Fasullo,
2010; Ceppi et al., 2012). Therefore, alleviating the biases by developing
climate models is important.</p>
      <p id="d1e242">There are two factors which might contribute to the biases in climate
simulated by the models: (a) inappropriate model structures, namely,
equations representing the physical processes or spatial resolution of the
model; and (b) inappropriate parameter values, which are specified in the
equations. We therefore attempt to alleviate the biases by modifying factors
(a) and (b) within the plausible range during the model development process.</p>
      <p id="d1e245">How much of the existing biases can be explained by the second factor (b)? In
other words, how much of the biases can be removed by modifying only
specified parameter values (parameter tuning)? This issue is important when
discussing the model development strategy because it helps to decide which
factor, (a) or (b), should be given a priority to efficiently reduce the
biases. If the biases in question can be completely explained by factor (b),
the priority for parameter tuning would be high. In this case, removing the
biases is relatively simple because parameter tuning is generally much easier
than modifying the model structures. By contrast, if most of the biases
cannot be explained by factor (b), modifying model structures should be given
a high priority.</p>
      <p id="d1e248">A perturbed parameter ensemble (PPE) experiment with a climate model is
useful when discussing the above issue. In the PPE experiment, we can create
different versions of a climate model in a systematic and comprehensive way
by modifying the specified parameter values in the model within a plausible
range (Murphy et al., 2004). If we evaluate the biases by comparing
present-day climate with observation data in each version of the PPE models,
we should be able to evaluate parametric uncertainty, namely, the inter-model
difference of the biases due to parameter settings. This inter-model
difference would also provide a measure regarding how much of the biases can
be removed by parameter tuning only.</p>
      <p id="d1e252">The benefit of PPE experiments, as discussed above, has been illustrated in
previous studies. For example, Zhang et al. (2012) conducted a PPE experiment
with an atmosphere general circulation model (AGCM) and evaluated the
performance of cloud simulations compared with satellite observations over
various tropical regions. The results indicate that the model performance in
simulating clouds is sensitive to parameter tuning. Yokohata et al. (2012)
focused on different PPE experiments conducted with an atmosphere–ocean GCM
(AOGCM), two atmosphere–slab ocean GCMs (ASGCMs), and an AGCM, and evaluated
the model performance in simulating the cloud radiative effect at TOA
compared with observations. They found that the sensitivity of the model
biases to parameter tuning varies widely among different regions. In the PPEs
analyzed in the study, however, the sea surface temperature (SST) bias was
suppressed by applying flux adjustment at the sea surface in both the AOGCM
and ASGCM.</p>
      <p id="d1e255">In the present study, we attempt to better understand the parametric
uncertainty of TOA radiation and cloud biases by using the PPE output of an
AOGCM without flux adjustment. There is an advantage in using the AOGCM
without flux adjustment because climate projections in the CMIP5 Multi-Model
Ensemble (MME) are conducted with AOGCMs without flux adjustment and the
biases of such AOGCMs are therefore directly relevant for future projections
using CMIP5 (Flato et al., 2013). If we suppress the SST biases in the AOGCMs
by applying flux adjustment, the TOA radiation and cloud biases in which we
are interested might be obscured. In addition, the parametric uncertainty of
the biases might be overestimated if we apply flux adjustment because it
allows us to include AOGCMs with large radiative imbalance at the TOA as
valid samples in the PPE, while such models are not used for future
projections in the CMIP5 MME.</p>
      <p id="d1e258">When evaluating biases in the simulated clouds, we use output of the Cloud
Feedback Model Inter-comparison Project (CFMIP) Observation Simulator Package
(COSP), which is incorporated into the AOGCM. The COSP is diagnostic software
that processes the GCM outputs, such as the cloud amount, and simulates the
signals that would be retrieved by satellites (Bodas-Salcedo et al., 2011).
It increases the chances that the difference between the model output and
observation reflects real biases in the model simulation rather than
observational limitations. Therefore, COSP has been widely used in previous
studies, which evaluate clouds simulated by the CMIP5 MME. The studies
indicate that the optical thickness of the simulated clouds tends to be
overestimated compared with the observation, as in the CMIP3 (Klein et
al., 2013; Nam et al., 2012; Zhang et al., 2005). In the present study, we
evaluate the parametric uncertainty of this too thick (bright)
bias by analyzing the COSP output
of the PPE experiment, and discuss how much of the bias can be removed by
parameter tuning only.</p>
      <p id="d1e261">Section 2 describes the AOGCM, design of the PPE experiment, and observation
data used for the evaluation. In Sect. 3, we identify the biases in the TOA
radiation and discuss the parametric uncertainty of the biases. We then focus
on cloud biases in Sect. 4 to examine whether the too thick
bias can be controlled by
parameter tuning. In addition, Sect. 5 describes which tuning parameters are
effective in controlling the TOA cloud radiative effect. In Sect. 6, we
discuss implications and limitations of the present study, as well as the
potential pathway towards model improvement. Finally, we summarize the
conclusions in Sect. 7.</p>
</sec>
<sec id="Ch1.S2">
  <title>Models and methods</title>
<sec id="Ch1.S2.SS1">
  <title>Design of the perturbed parameter ensemble</title>
      <p id="d1e275">We compared the output of the PPE experiment using the AOGCM in the
pre-industrial control setting with the observation to evaluate the model
biases. We used the Model for Inter-disciplinary Research on Climate
version 5 (MIROC5) AOGCM. The atmospheric component has a horizontal
resolution of T42 (<inline-formula><mml:math id="M1" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 2.8<inline-formula><mml:math id="M2" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>) with 40 vertical levels. The ocean
component is COCO4.5 with a horizontal resolution of <inline-formula><mml:math id="M3" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 1<inline-formula><mml:math id="M4" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> and
49 vertical levels in addition to a bottom boundary layer. The model is the
low-resolution version of the MIROC5 AOGCM, which is used in CMIP5 with a
higher resolution of T85 (<inline-formula><mml:math id="M5" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 1.4<inline-formula><mml:math id="M6" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>) in the atmosphere (Watanabe
et al., 2010). We confirmed that the low-resolution version ran stably and
did not suffer from significant climate drift in the pre-industrial control
experiment without flux adjustment when the standard setting of the tuning
parameters was specified. The model could also reproduce the characteristic
biases of the TOA radiation and clouds of the T85 version used in CMIP5.</p>
      <p id="d1e327">The cloud parameterization of MIROC5 employs a statistical scheme. We assume
that there is small-scale fluctuation of total water <inline-formula><mml:math id="M7" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> within
the model grid box, which is described by a probability density function
(PDF), <inline-formula><mml:math id="M8" display="inline"><mml:mrow><mml:mi>G</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. We also assume that the <inline-formula><mml:math id="M9" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> exceeding
supersaturation with respect to liquid, <inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, takes the form of
cloud liquid. Then the cloud cover <inline-formula><mml:math id="M11" display="inline"><mml:mi>C</mml:mi></mml:math></inline-formula> and cloud liquid content
<inline-formula><mml:math id="M12" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">c</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are diagnosed as the integral over the saturated part of the
grid box, as follows:

                <disp-formula id="Ch1.E1" content-type="numbered"><mml:math id="M13" display="block"><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi>C</mml:mi><mml:mo>=</mml:mo><mml:msubsup><mml:mo>∫</mml:mo><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow><mml:mi mathvariant="normal">∞</mml:mi></mml:msubsup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi>G</mml:mi><mml:mfenced close=")" open="("><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mfenced><mml:mi mathvariant="normal">d</mml:mi><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          and

                <disp-formula id="Ch1.E2" content-type="numbered"><mml:math id="M14" display="block"><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">c</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:msubsup><mml:mo>∫</mml:mo><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow><mml:mi mathvariant="normal">∞</mml:mi></mml:msubsup><mml:mfenced open="(" close=")"><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mfenced><mml:mo>⋅</mml:mo><mml:mi>G</mml:mi><mml:mfenced open="(" close=")"><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mfenced><mml:mi mathvariant="normal">d</mml:mi><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

          Overbar denotes average over the grid box. The shape of the PDF is
represented by a triangular function. The model predicts variance and
skewness of the PDF, which are affected by cumulus convection, cloud
microphysics, turbulent mixing, and advection. Details of the cloud
parameterization are described by Watanabe et al. (2009).</p>
      <p id="d1e500">MIROC5 also uses a cloud microphysics parameterization following Wilson and
Ballard (1999). The parameterization predicts ice water content using
physically based tendency terms which represent nucleation, deposition and
sublimation, riming, and ice melting, among others.</p>
      <p id="d1e503">We should note that perturbing specified values of tuning parameters might
increase the net radiation imbalance at TOA when conducting PPE with an AOGCM
in the pre-industrial control setting, which leads to a gradual change in
climate different from the initial state (climate drift). Such a change would
make the definition of the control climate difficult. In addition, the
simulated climate might not be a valid example of pre-industrial control
simulations. Applying flux adjustment at the sea surface would help to
suppress the climate drift by reducing the SST biases. However, it might also
cover up the biases in the TOA radiation and clouds, which are sensitive to
the SST. What we need here is both stable climate and SST biases, as
indicated in the CMIP5 pre-industrial control experiments. Therefore, we used
the output of the PPE experiment conducted in Shiogama et al. (2012),
following the suppressed imbalance sampling (SIS) method, in the present
study. The SIS is a method to subsample members of the PPE with a small
imbalance in the TOA radiation and thus with small climate drift. This
enables us to study stable climates of the PPE without applying flux
adjustment. Other methods analogous to the SIS have been discussed in Jackson
et al. (2012) and Yamazaki et al. (2013).</p>
      <p id="d1e507">The details of the SIS method are described in Shiogama et al. (2012). For
reference, we also present the summary in the following. First, we select 10
tuning parameters, which are considered important to the radiative forcing of
CO<inline-formula><mml:math id="M15" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> doubling, climate feedback, and climate sensitivity (Table 1). The
selection is based on the results of sensitivity experiments using the
atmospheric component of MIROC5, which shows that perturbing the 10
parameters has a large impact on the radiative forcing and climate feedback
compared to other tuning parameters. The selected 10 parameters are related
to cumulus convection, cloud, turbulence, aerosol, and land surface
processes. The maximum and minimum values of the parameters are determined by
expert judgement so that the parameters are within the plausible range,
namely, they are consistent with the observation and current understanding of
the climate system. Values of the 10 parameters are then selected from the
maximum to minimum ranges and randomly paired to produce 5000 samples of 10-D
vectors, following Latin hypercube sampling. Each vector corresponds to a set
of input values for the 10 tuning parameters. We further select 56 members
from the 5000 samples so that the TOA radiative imbalance of the selected
members is close to that of the standard model. The selection of the 56
members is conducted with the following three steps: (1) we conduct a PPE
experiment with the MIROC5 AGCM under pre-industrial conditions, in which
tuning parameters are changed one at a time to the minimum and maximum values
before running the AGCM for 6 years, (2) outputs of the PPE members are
linearly interpolated to estimate the TOA radiative imbalance for the 5000
samples of the tuning parameters, and finally, (3) we select 56 members in
which the TOA radiative imbalance is close to that of the standard model. The
number of subsampled members, namely 56, is determined by the computational
resources available. Note that the number increased from 35 in the previous
study by Shiogama et al. (2012). Finally, we create 56 members of the MIROC5
AOGCM by specifying different members of the 10-D vectors for the model as
input values for the tuning parameters.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><caption><p id="d1e522">List of physics parameters that were varied in the MIROC5 PPE.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Name</oasis:entry>  
         <oasis:entry colname="col2">Category</oasis:entry>  
         <oasis:entry colname="col3">Description</oasis:entry>  
         <oasis:entry colname="col4">Standard</oasis:entry>  
         <oasis:entry colname="col5">Min</oasis:entry>  
         <oasis:entry colname="col6">Max</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">wcbmax<inline-formula><mml:math id="M22" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">Cumulus</oasis:entry>  
         <oasis:entry colname="col3">Maximum cumulus updraft velocity at cloud base (m s<inline-formula><mml:math id="M23" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col4">1.7</oasis:entry>  
         <oasis:entry colname="col5">0.7</oasis:entry>  
         <oasis:entry colname="col6">2.8</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">precz0<inline-formula><mml:math id="M24" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">Cumulus</oasis:entry>  
         <oasis:entry colname="col3">Base height for cumulus precipitation (m)</oasis:entry>  
         <oasis:entry colname="col4">500</oasis:entry>  
         <oasis:entry colname="col5">200</oasis:entry>  
         <oasis:entry colname="col6">1000</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">clmd<inline-formula><mml:math id="M25" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">Cumulus</oasis:entry>  
         <oasis:entry colname="col3">Entrainment efficiency (ND)</oasis:entry>  
         <oasis:entry colname="col4">0.51</oasis:entry>  
         <oasis:entry colname="col5">0.4</oasis:entry>  
         <oasis:entry colname="col6">0.6</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">vicec<inline-formula><mml:math id="M26" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">Cloud</oasis:entry>  
         <oasis:entry colname="col3">Factor for ice falling speed (m<inline-formula><mml:math id="M27" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">0.474</mml:mn></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M28" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col4">38</oasis:entry>  
         <oasis:entry colname="col5">25</oasis:entry>  
         <oasis:entry colname="col6">40</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">b1<inline-formula><mml:math id="M29" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">Cloud</oasis:entry>  
         <oasis:entry colname="col3">Berry parameter (m<inline-formula><mml:math id="M30" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula> kg<inline-formula><mml:math id="M31" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col4">0.09</oasis:entry>  
         <oasis:entry colname="col5">0.07</oasis:entry>  
         <oasis:entry colname="col6">0.11</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">faz1<inline-formula><mml:math id="M32" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">d</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">Turbulence</oasis:entry>  
         <oasis:entry colname="col3">Factor for PBL overshooting (ND)</oasis:entry>  
         <oasis:entry colname="col4">1.5</oasis:entry>  
         <oasis:entry colname="col5">1</oasis:entry>  
         <oasis:entry colname="col6">3</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">alp1<inline-formula><mml:math id="M33" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">d</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">Turbulence</oasis:entry>  
         <oasis:entry colname="col3">Factor for length scale <inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (ND)</oasis:entry>  
         <oasis:entry colname="col4">0.23</oasis:entry>  
         <oasis:entry colname="col5">0.16</oasis:entry>  
         <oasis:entry colname="col6">0.3</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">tnuw<inline-formula><mml:math id="M35" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">Aerosol</oasis:entry>  
         <oasis:entry colname="col3">Timescale for nucleation (s)</oasis:entry>  
         <oasis:entry colname="col4">18 000</oasis:entry>  
         <oasis:entry colname="col5">14 400</oasis:entry>  
         <oasis:entry colname="col6">21 600</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">ucmin<inline-formula><mml:math id="M36" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">Aerosol</oasis:entry>  
         <oasis:entry colname="col3">Minimum cloud droplet number (liquid) (m<inline-formula><mml:math id="M37" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col4"><inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">7</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">7</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.0</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">7</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">alb<inline-formula><mml:math id="M41" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">e</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">Surface</oasis:entry>  
         <oasis:entry colname="col3">Albedo of ice and snow<inline-formula><mml:math id="M42" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">f</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4">Medium</oasis:entry>  
         <oasis:entry colname="col5">Low</oasis:entry>  
         <oasis:entry colname="col6">High</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e525"><inline-formula><mml:math id="M16" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula> Chikira and Sugiyama (2010). <inline-formula><mml:math id="M17" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula> Wilson
and Ballard (1999). <inline-formula><mml:math id="M18" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula> Takemura et al. (2005, 2009).
<inline-formula><mml:math id="M19" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">d</mml:mi></mml:msup></mml:math></inline-formula> Nakanishi and Niino (2004). <inline-formula><mml:math id="M20" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">e</mml:mi></mml:msup></mml:math></inline-formula> Takata et al. (2003)
and Watanabe et al. (2010). <inline-formula><mml:math id="M21" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">f</mml:mi></mml:msup></mml:math></inline-formula> “alb” indicates a collection of
eight parameters corresponding to the albedo of ice and snow over sea and
land.</p></table-wrap-foot></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><caption><p id="d1e1055">Observation data used for the model evaluation. All data are monthly
means.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.9}[.9]?><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Variable</oasis:entry>  
         <oasis:entry colname="col2">Dataset</oasis:entry>  
         <oasis:entry colname="col3">Period</oasis:entry>  
         <oasis:entry colname="col4">References</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">Top-of-atmosphere</oasis:entry>  
         <oasis:entry colname="col2">CERES-EBAF (Edition 4.0)</oasis:entry>  
         <oasis:entry colname="col3">March 2000–January 2017</oasis:entry>  
         <oasis:entry colname="col4">Loeb et al. (2009)</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">radiative fluxes</oasis:entry>  
         <oasis:entry colname="col2">ERBE-S9</oasis:entry>  
         <oasis:entry colname="col3">January 1985–December 1989</oasis:entry>  
         <oasis:entry colname="col4">Barkstrom (1984)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">ISCCP-FD</oasis:entry>  
         <oasis:entry colname="col3">January 1986–December 1990</oasis:entry>  
         <oasis:entry colname="col4">Zhang et al. (2004)</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Cloud fraction</oasis:entry>  
         <oasis:entry colname="col2">GCM simulator-oriented ISCCP cloud product</oasis:entry>  
         <oasis:entry colname="col3">July 1983–June 2008</oasis:entry>  
         <oasis:entry colname="col4">Pincus et al. (2012), Rossow et al. (1996)</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">CALIPSO-GOCCP</oasis:entry>  
         <oasis:entry colname="col3">June 2006–December 2010</oasis:entry>  
         <oasis:entry colname="col4">Chepfer et al. (2010)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <p id="d1e1166">We ran the 56 members of the MIROC5 AOGCM for 30 years with the
pre-industrial control setting and confirmed that the changes in the
simulated surface air temperature from the initial state (climate drift) were
small. This was expected because the TOA radiative imbalance is close to that
of the standard model. Years 1–10 of the simulation were considered to be a
spin-up period during which the simulated climate adjusted to the modified
tuning parameters. The output from years 11 to 30 was averaged to make a
climatology. The model biases were defined as the difference of the
climatology from observation data.</p>
      <p id="d1e1169">The observation data used for the model evaluation originate in the period of
1983–2017 (Table 2). Therefore, the model output from the historical
simulation of the same period is appropriate for comparison with the
observation. However, conducting the historical simulation requires an
extension for more than 150 years after the pre-industrial control simulation
of 30 years. This means a more than 6-fold increase in computational cost,
which we are not able to cover. Therefore, we decided to use the
pre-industrial control simulation as a surrogate for the historical
simulation, assuming that the former reproduces the biases in the latter,
regarding TOA radiation and clouds. This assumption is supported by other
simulation results. For example, we compared biases in the historical
simulation with those in the pre-industrial control simulation using MIROC5
with the horizontal resolution of T85 (<inline-formula><mml:math id="M43" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 1.4<inline-formula><mml:math id="M44" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>). We confirmed
that the TOA radiation and cloud biases in the two simulations were similar
to each other (not shown).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><caption><p id="d1e1191">TOA radiation bias in the global annual mean for <bold>(a)</bold> net,
<bold>(b)</bold> longwave and shortwave, <bold>(c)</bold> longwave clear-sky,
shortwave clear-sky, longwave CRE, and shortwave CRE components. The biases
are with respect to the average of three observational data, namely, ERBE-S9,
ISCCP-FD, and CERES-EBAF. The net radiation of zero with no TOA imbalance is
indicated by the dashed line in <bold>(a)</bold>. The unit is W m<inline-formula><mml:math id="M45" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and the
signs are positive downward.</p></caption>
          <?xmltex \igopts{width=312.980315pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017-f01.png"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS2">
  <title>Observation data</title>
      <p id="d1e1230">Table 2 summarizes the observation data which are compared with the model
output. They all are monthly mean data. We defined the model biases referring
to multiple observations, namely three for TOA radiation and two for the
cloud amount; therefore, the observation uncertainty can be taken into
account. The biases are considered robust if they are commonly seen with
respect to multiple observations. The observation data for TOA radiation are
derived from CERES-EBAF (Loeb et al., 2009), ERBE-S9 (Barkstrom, 1984), and
ISCCP-FD (Zhang et al., 2004). The data for the cloud amount are from the GCM
simulator-oriented ISCCP cloud product (Pincus et al., 2012; Rossow et
al., 1996) and CALIPSO-GOCCP (Chepfer et al., 2010). The cloud amount data of
the ISCCP are custom-built daytime-only monthly averages, which are available
from the CFMIP-OBS website
(<uri>http://climserv.ipsl.polytechnique.fr/cfmip-obs</uri>). We first referred to
the observation data to calculate the monthly climatology for the period in
Table 2. We then interpolated the data linearly to the horizontal resolution
of T42 and used them to calculate the difference from the model output.</p>
      <p id="d1e1236">When evaluating biases of clouds simulated by the MIROC5 AOGCM, we used the
output of the COSP satellite simulation software (version 1.2.2),
which was implemented in the model; COSP includes software simulating
satellite observations of ISCCP (Klein and Jakob, 1999; Webb et al., 2001)
and CALIOP lidar (Chepfer et al., 2008). We compared the cloud amount
identified by the ISCCP simulator with the GCM simulator-oriented ISCCP cloud
product and the one determined with the CALIOP lidar simulator with the
CALIPSO–GOCCP data. We confirmed that the ISCCP simulator was implemented
properly in the MIROC5 AOGCM following Zelinka et al. (2012), which means we
calculated the total sum of the cloud amount from the ISCCP simulator for all
cloud top pressure and optical thickness bins and confirmed that the sum is
consistent with the “native” cloud amount identified in the MIROC5 AOGCM.
Note that optically thin clouds with TAU <inline-formula><mml:math id="M46" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 0.3 are not included in this
comparison because the available “native” cloud amount does not include
such clouds.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>Parametric uncertainty of the TOA radiation bias</title>
      <p id="d1e1253">First, we present the outline of the TOA radiation bias of the MIROC5 PPE by
discussing the global annual mean values in Fig. 1. The biases in the net
radiation are small (Fig. 1a), which means that the values of all PPE members
are within the range of the three observations and near the zero net
radiation with no imbalance, indicated by the dashed line. This was expected
because we selected these members when designing the PPE following the SIS
method. If we focus on the components of the TOA radiation, however, we
notice larger biases compared with the net radiation (Fig. 1b, c). The
largest biases appear in the SCRE; the biases range from <inline-formula><mml:math id="M47" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>11.8 to
<inline-formula><mml:math id="M48" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>5.8 W m<inline-formula><mml:math id="M49" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. All PPE members are more than 3.0 W m<inline-formula><mml:math id="M50" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> smaller
than either one of the three observations. Therefore, parameter tuning
enables us to reduce the bias from <inline-formula><mml:math id="M51" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>11.8 to <inline-formula><mml:math id="M52" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>5.8 W m<inline-formula><mml:math id="M53" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> by as much
as 50 %; however, we cannot totally remove it or change its sign. The
shortwave clear-sky component (SWclr) also exhibits large biases in which all
PPE members are larger than either one of the three observations. Therefore,
we cannot change the sign of the bias by parameter tuning only.</p>
      <p id="d1e1321">We should note that the SCRE biases are negatively correlated with the LCRE
biases with the correlation coefficient of <inline-formula><mml:math id="M54" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.82. Therefore, if we reduce
the SCRE bias by making it more positive, the LCRE bias tends to be more
negative. This would reduce the LCRE bias in more than half of the PPE
members. Correlations of the SCRE biases with the biases in
clear-sky components are small: <inline-formula><mml:math id="M55" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.08
with LWclr and <inline-formula><mml:math id="M56" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.32 with SWclr.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><caption><p id="d1e1347">TOA radiation in the zonal annual mean for the
<bold>(a)</bold> shortwave CRE and <bold>(b)</bold> longwave CRE components. The unit
is W m<inline-formula><mml:math id="M57" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and the signs are positive downward.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017-f02.png"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><caption><p id="d1e1377">TOA radiation bias in the annual mean for the <bold>(a)</bold> shortwave
CRE and <bold>(b)</bold> longwave CRE components. The biases are for the ensemble
mean of the MIROC5 PPE with respect to CERES-EBAF. Standard deviation of the
TOA radiation bias among the PPE ensemble members for the
<bold>(c)</bold> shortwave CRE and <bold>(d)</bold> longwave CRE. Fraction of the PPE
ensemble members, which have positive signs of the TOA radiation bias, for
the <bold>(e)</bold> shortwave CRE and <bold>(f)</bold> longwave CRE.</p></caption>
        <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017-f03.png"/>

      </fig>

      <p id="d1e1405">Next, we discuss the characteristics of the radiation bias on a smaller
spatial scale, as shown by the zonal annual mean in Fig. 2. We especially
focus on the cloud radiative effect, which illustrates the biases related to
clouds. The negative SCRE biases, as observed in the global mean (Fig. 1c),
are mostly attributable to the biases at low latitudes (Fig. 2a). At those
latitudes, all PPE members are outside the range of the three observations.
Therefore, the bias cannot be eliminated or change sign by parameter tuning,
although it can be reduced by <inline-formula><mml:math id="M58" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 30 %. In the Arctic, on the other
hand, the inter-model difference among the PPE members tends to be larger
compared with other latitudes; hence, the observations lie within the PPE
spread. Here, the SCRE bias can be eliminated or change sign by parameter
tuning. The biases of the longwave cloud radiative effect (LCRE) appear to be
small at most latitudes (Fig. 2b). At least one of the PPE members is within
the range of the three observations at most latitudes.</p>
      <p id="d1e1415">The characteristics on an even smaller spatial scale are illustrated by the
geographical distribution of the annual mean cloud radiative effect biases in
Fig. 3a and b. We used CERES–EBAF as the observation because it measures the
radiative fluxes more directly than the ISCCP–FD and it also has various
advantages over the ERBE–S9 such as scene identification (Wielicki et
al., 1996; Loeb et al., 2009). We confirmed that similar results were
obtained when using ISCCP–FD or ERBE-S9 (not shown).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><caption><p id="d1e1420">Cloud amount bias in the July mean with respect to the
<bold>(a)</bold> CALIPSO and <bold>(b)</bold> ISCCP observations. The biases are for
the ensemble mean of the MIROC5 PPE. Fraction of the PPE ensemble members,
which have positive signs of the cloud amount bias, with respect to
<bold>(c)</bold> CALIPSO and <bold>(d)</bold> ISCCP observation.</p></caption>
        <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017-f04.png"/>

      </fig>

      <p id="d1e1441">The negative SCRE bias at the low latitudes, as observed in the zonal mean
plot (Fig. 2a), appears pronounced over the oceans, exceeding
<inline-formula><mml:math id="M59" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>40 W m<inline-formula><mml:math id="M60" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in large areas (Fig. 3a). We also notice positive biases
at middle to high latitudes over the Southern Ocean, the northwestern part of
Eurasia, and the northeastern part of North America. They exceed
5 W m<inline-formula><mml:math id="M61" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in some places. On the other hand, if we measure the
parametric uncertainty of the SCRE bias using the standard deviation among
the PPE members, we notice that the uncertainty does not exceed
4 W m<inline-formula><mml:math id="M62" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in most areas (Fig. 3c). Therefore, removing or changing the
sign of the SCRE bias at each grid point by parameter tuning only is
difficult. This can be confirmed by the fractions of the PPE members, which
have positive biases (Fig. 3e). At each grid point, we count the number of
the PPE members which have a positive SCRE bias. Then we divide it by the
total number of PPE members, which is 56. The resulting fractions are plotted
in Fig. 3e, so that we can see whether the observation data lie within the
range of the PPE spread at each grid point. In most areas of the globe, the
fraction is 0 (blue) or 1 (orange), which means that observation data are
outside the range of the PPE spread, or that all PPE members have the same
sign of the SCRE bias. In this case, parameter tuning plays only a limited
role in reducing the SCRE bias; in particular, the sign of the bias cannot be
changed. An exception is the Arctic. Here, the SCRE bias is about
5 W m<inline-formula><mml:math id="M63" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and the standard deviation of the bias ranges from 6 to
8 W m<inline-formula><mml:math id="M64" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Fig. 3a, c). The observation data are within the range of
the PPE spread. Therefore, the biases of the PPE members can be either
positive or negative, which is indicated by the green and yellow colours in
Fig. 3e. Here, we can change the sign of the SCRE bias by parameter tuning.</p>
      <p id="d1e1513">The LCRE bias is smaller than the SCRE bias (Fig. 3a, b). It is smaller than
20 W m<inline-formula><mml:math id="M65" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in most areas. However, the standard deviation of the LCRE
bias is even smaller (Fig. 3d), less than 5 W m<inline-formula><mml:math id="M66" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, except for the
limited area in the tropics. Therefore, changing the sign of the LCRE bias is
difficult in most regions except for the northern mid-latitudes and the South
Pacific. This is illustrated by the fractions of the PPE members, which have
positive biases (Fig. 3f). They are 0 (blue) or 1 (orange) in large areas
including the Arctic.</p>
</sec>
<sec id="Ch1.S4">
  <title>Parametric uncertainty of the cloud bias</title>
      <p id="d1e1546">To better understand the origin of the cloud radiative effect bias, we
examine the geographical distribution of the cloud amount bias in Fig. 4. In
the following, we present results for the boreal summer season when the cloud
amount bias is most pronounced in the Hawaiian Trade Cumulus Region, which we
discuss later in this section. The cloud amount is overestimated over the
Pacific and Atlantic at low latitudes (Fig. 4a, b), which contributes to the
negative SCRE bias, as shown in Fig. 3a. The overestimation is a robust
feature; it exists with respect to both ISCCP and CALIPSO observations. In
addition, all members of the PPE have positive biases in those regions
(Fig. 4c, d). Therefore, the biases cannot be removed by parameter tuning. We
should note here that the multi-model mean ISCCP cloud amount (TAU <inline-formula><mml:math id="M67" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 1.3)
from the CFMIP1 and CFMIP2 ensembles does not show such positive bias at low
latitudes (Klein et al., 2013). Therefore, the bias might be a problem
specific to the MIROC5 AOGCM.</p>
      <p id="d1e1556">The cloud amount bias can be decomposed into the contributions from different
cloud top pressure and optical thickness bins, as illustrated for the
Hawaiian Trade Cumulus Region (15–35<inline-formula><mml:math id="M68" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N,
160<inline-formula><mml:math id="M69" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E–140<inline-formula><mml:math id="M70" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W) in Fig. 5. The region of focus is indicated
by the black square in Fig. 4b. The MIROC5 PPE tends to overestimate
optically thick clouds (TAU <inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">3.6</mml:mn></mml:mrow></mml:math></inline-formula>) and underestimate optically thin
clouds (TAU <inline-formula><mml:math id="M72" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">3.6</mml:mn></mml:mrow></mml:math></inline-formula>) compared with the ISCCP observation (Fig. 5a, b, c).
The contribution of the former outweighs that of the latter, which leads to
the overestimation of the cloud amount. The overestimation is especially
large in low-top clouds (PC <inline-formula><mml:math id="M73" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 680). The clouds of the MIROC5 PPE are
biased towards optically thick clouds compared with the observation, which
also contributes to the negative SCRE bias.</p>
      <p id="d1e1614">We further examined the signs of the cloud biases for each bin of the cloud
top pressure and optical thickness categories. The fraction of the positive
biases within the PPE members is 0 (blue) or 1 (orange) in 36 out of 42 bins
(Fig. 5d); all PPE members have the same cloud bias sign in most (85 %)
of the cloud top pressure and optical thickness bins. Therefore, removing the
too thick bias by parameter
tuning only is considered difficult in this model.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><caption><p id="d1e1619">ISCCP cloud amount of the July mean for the Hawaiian Trade Cumulus
Region (15–35<inline-formula><mml:math id="M74" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 160<inline-formula><mml:math id="M75" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E–140<inline-formula><mml:math id="M76" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W), indicated by
the black square in Figure 4b, for different categories of the cloud top
pressure (PC) and cloud optical thickness (TAU). Each panel is for
<bold>(a)</bold> ISCCP observation, <bold>(b)</bold> MIROC5 PPE ensemble mean,
<bold>(c)</bold> model bias, namely <bold>(b)</bold> minus <bold>(a)</bold>, and
(d) fraction of the PPE ensemble members with positive bias.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017-f05.png"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><caption><p id="d1e1674">Relationship between the non-overlapped low cloud amount and
shortwave CRE of the July mean for the Hawaiian Trade Cumulus Region.</p></caption>
        <?xmltex \igopts{width=213.395669pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017-f06.png"/>

      </fig>

      <p id="d1e1683">The overestimation of both the cloud amount and the optical thickness
(too thick bias) contributes
to the negative SCRE bias. To illustrate the importance of the too thick
bias for the SCRE bias, we plot
the relationship between the SCRE and the low-top cloud amount in Fig. 6.
Note that we selected data of low-top clouds, which are not overlapped by
middle-top or high-top clouds in the figure; hence, the SCRE is not affected
by clouds other than the low-top clouds, which prevail in the Hawaiian Trade
Cumulus Region. The figure shows that SCRE negatively increases as the
low-top cloud amount increases in both the observation and the MIROC5 PPE.
However, the MIROC5 PPE shows a negatively larger SCRE compared with the
observation. It is larger by <inline-formula><mml:math id="M77" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 30 W m<inline-formula><mml:math id="M78" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, even if the models have
the same cloud amount as the observation, which indicates that the optical
thickness of low-top clouds is overestimated in the MIROC5 PPE. The
above-mentioned characteristics are common to all PPE members and the
observation is outside the range of the PPE. This again indicates that we
cannot remove the too thick bias by parameter tuning only.</p>
</sec>
<sec id="Ch1.S5">
  <title>Characteristics of different tuning parameters</title>
      <p id="d1e1712">The results presented so far illustrate the difficulties in removing the TOA
radiation and cloud biases by parameter tuning. At the same time, however, we
also learned that parameter tuning enables us to control the model biases to
some extent, demonstrating its benefit for model development. For example,
the global mean SCRE bias can be reduced by as much as 50 % by tuning
only (Fig. 1c). To obtain the desired effects by parameter tuning, we need to
understand the characteristics of different tuning parameters. Therefore, in
the following, we briefly describe the regions in which the tuning parameters
in Table 1 control the model biases, focusing on the CRE.</p>
      <p id="d1e1715">We calculated the regression coefficients of the CRE on different tuning
parameters for each latitude–longitude grid point, referring to the 56
members of the PPE, and plotted the geographical distribution of the
coefficients in Figs. 7 and 8. In addition, we calculated the regression of
the ISCCP cloud properties (cloud amount, cloud optical thickness, and cloud
top pressure) on the tuning parameters. The results are shown in Appendix
Figs. A1, A2, and A3. Note that the tuning parameters were normalized to the
range of 0.0 to 1.0; thus, the coefficients indicate the responses of the CRE
and clouds to an increase in the tuning parameters from the minimum to the
maximum values in Table 1.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><caption><p id="d1e1720">Regression coefficient of the annual mean TOA shortwave CRE on the
tuning parameters calculated with the 56 samples of the MIROC5 PPE. The
definition of the tuning parameters is shown in Table 1. The tuning
parameters are normalized to the range of [0, 1]. The black curves indicate
the threshold of the statistical significance with the 5 % level.</p></caption>
        <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017-f07.png"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><caption><p id="d1e1732">Regression coefficient of the annual mean TOA longwave CRE on the
tuning parameters calculated using the 56 samples of the MIROC5 PPE. The
definition of the tuning parameters is shown in Table 1. The tuning
parameters are normalized to the range of [0, 1]. The black curves indicate
the threshold of the statistical significance with the 5 % level.</p></caption>
        <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017-f08.png"/>

      </fig>

      <p id="d1e1741">The tuning parameters, which are especially effective in controlling the
shortwave CRE, are wcbmax and albice; wcbmax and albice can change the SCRE
by more than 10 W m<inline-formula><mml:math id="M79" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> over low-latitude oceans and the Arctic,
respectively (Fig. 7a, j).</p>
      <p id="d1e1756">The parameter wcbmax is the maximum cumulus updraft velocity at the cloud
base. Increasing the parameter leads to an increase in the cloud amount over
low-latitude oceans (Fig. A1a), which would increase the shortwave reflection
by clouds and contribute to the negative increase in the SCRE, as indicated
by the blue colour in Fig. 7a. Indeed, the geographical distribution of the
changes in the cloud amount and SCRE are similar to each other, which is
consistent with the above-mentioned argument (Figs. A1a and 7a).</p>
      <p id="d1e1759">Albice is the albedo of ice and snow. Increasing the parameter leads to an
increase in the clear-sky albedo at high latitudes covered with ice and snow,
which also decreases the albedo contrast between the clear- and all-sky
components. Because the SCRE is proportional to this albedo contrast, it
approaches zero by definition. Indeed, the SCRE shows a positive increase at
high latitudes, as indicated by the red colour in Fig. 7j, which is
consistent with the above-mentioned argument. In addition, increasing the
albice leads to the decrease in cloud amount and cloud optical thickness in
the Arctic (Figs. A1j, A2j), which is also consistent with the change in SCRE
(Fig. 7j).</p>
      <p id="d1e1762">We confirmed in Figs. 2a and 3e that the parametric uncertainty of the SCRE
bias is exceptionally large in the Arctic compared with other latitudes. In
the Arctic, albice is the most effective parameter controlling the SCRE based
on Fig. 7. We therefore surmise that the large uncertainty in the SCRE bias
is mainly caused by perturbing the albice.</p>
      <p id="d1e1765">In addition to the wcbmax and albice, other parameters, such as clmd, vicec,
b1, alp1, and ucmin, have a considerable impact on the SCRE (Fig. 7c, d, e,
g, i). Tuning these parameters leads to changes in the SCRE, which are
consistent with the changes in the cloud amount or cloud optical thickness or
in both of them (Figs. A1, A2). To reduce the negative SCRE bias in
low-latitude oceans, as shown in Fig. 3a, the tuning of wcbmax, clmd, vicec,
and b1 would be effective. On the other hand, the impact of tuning precz0,
faz1, and tnuw would be relatively small.</p>
      <p id="d1e1769">Focusing on the longwave CRE, we find that the most effective parameters are
wcbmax and vicec; wcbmax and vicec can change the LCRE by more than
10 W m<inline-formula><mml:math id="M80" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> at low latitudes (Fig. 8a, d).</p>
      <p id="d1e1784">Increasing the wcbmax leads to changes in the cloud top pressure, which
decreases in tropical Africa, western tropical Pacific, and the South Pacific
Convergence Zone, while it increases in the subtropics, especially around
South and Southeast Asia (Fig. A3a). The decrease (increase) in the cloud top
pressure would lead to a decrease (increase) in the cloud top temperature and
upward longwave radiation, which would contribute to the increase (decrease)
in the greenhouse effect of clouds and the LCRE. The geographical
distribution of the changes in the cloud top pressure and LCRE are similar to
each other, which is consistent with the above-mentioned argument
(Figs. A3a, 8a).</p>
      <p id="d1e1787">The vicec parameter is a factor for the icefall speed. Increasing the
parameter causes the increase in the icefall speed, decrease in the cloud
amount (Fig. A1d), and increase in the cloud top pressure (Fig. A3d). Such
changes in the cloud properties would contribute to the decrease in the
greenhouse effect of clouds, which is consistent with the decrease in LCRE,
as shown in Fig. 8d.</p>
</sec>
<sec id="Ch1.S6">
  <title>Discussion</title>
      <p id="d1e1796">The results of the present study have implications for the future development
of MIROC. Parameter tuning has only a limited capability to control the SCRE
biases over low-latitude oceans and the Southern Ocean in MIROC5. Therefore,
modifying the model structure should be given a high priority to effectively
alleviate the biases. The results underline the importance of improving
parameterizations based on cloud process studies. On the other hand, the SCRE
bias in the Arctic can be fully controlled by tuning the albedo of snow and
ice in the current model structure. However, we expect that the albedo will
be predicted or diagnosed with a more physically based parameterization in
the future rather than being specified as a tuning parameter, which would
make the tuning of the SCRE more difficult.</p>
      <p id="d1e1799">Which part of the model structure is responsible for the SCRE biases in
MIROC5? One possible factor is insufficient vertical mixing in the lower
troposphere. In MIROC5, the overestimation of the low-top cloud amount over
low-latitude oceans is accompanied by the dry bias in the free troposphere
above the low-top clouds, suggesting that vertical mixing in the lower
troposphere, such as that caused by shallow convection, is insufficient. In
order to test the idea, we implemented a shallow convection parameterization
on the MIROC5 AGCM following Park and Bretherton (2009). We did some
parameter tuning after the implementation to ensure that TOA radiation is
balanced as before the implementation. The results show that the
implementation (and the tuning) makes the SCRE more positive in low-latitude
oceans, which alleviates the negative SCRE bias (Figs. 3a and 9).</p>
      <p id="d1e1802">As an illustration, we focus on a grid point in the eastern tropical Pacific
and look at the vertical profile of cloud condensate (liquid plus ice) and
its tendency in Fig. 10. We find a large maximum of cloud condensate at
850 hPa before the implementation of the shallow convection scheme (solid
line in Fig. 10a). This maximum is maintained by increasing tendencies from
condensation, evaporation, turbulent mixing, and convection (black and light
blue lines in Fig. 10b), and also by decreasing tendency from precipitation
(magenta line in Fig. 10b). After the implementation, those tendencies become
smaller than before (Fig. 10c), and the maximum of cloud condensate at
850 hPa disappears (broken line in Fig. 10a). There appears an increasing
tendency from shallow convection at upper levels around 600–800 hPa (orange
line in Fig. 10c), but this does not lead to large increase in cloud
condensate. The obtained results are consistent with the view that vertical
mixing induced by shallow convection causes upward transport of total water
in the lower troposphere, which dehydrates the low-cloud layer and decreases
the low cloud condensate, thereby making the SCRE less negative.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9"><caption><p id="d1e1807">Changes in annual mean TOA shortwave CRE induced by implementing a
shallow convection parameterization and parameter tuning in the MIROC5 AGCM.
The black square in the eastern tropical Pacific indicates the position of a
grid point focused on in Fig. 10.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017-f09.png"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10" specific-use="star"><caption><p id="d1e1819">Vertical profile of annual mean <bold>(a)</bold> cloud condensate and
<bold>(b, c)</bold> cloud condensate tendencies in the eastern tropical Pacific
simulated by the MIROC5 AGCM. The data are from the grid point located at
(114<inline-formula><mml:math id="M81" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W, 5<inline-formula><mml:math id="M82" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S), indicated by the black square in Fig. 9.
<bold>(a)</bold> Cloud condensate simulated without shallow convection
parameterization (solid line) and with the parameterization (broken line),
<bold>(b)</bold> cloud condensate tendencies simulated without shallow convection
parameterization, and <bold>(c)</bold> cloud condensate tendencies simulated with
the parameterization.</p></caption>
        <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017-f10.png"/>

      </fig>

      <p id="d1e1862">As a next step, research concerning the impact of shallow convection on cloud
feedback would also be useful. Previous studies indicate that simulated
strength of convective mixing between the lower and middle tropical
troposphere is related to cloud feedback and climate sensitivity in
multi-model ensembles (Sherwood et al., 2014; Kamae et al., 2016). The
results suggest that shallow convective mixing contributes to inter-model
spread in climate sensitivity, which causes difficulty in assessing the
impact of climate change. In order to test the hypothesis, a multi-model
comparison is proposed in which climate feedback is estimated with shallow
convection turned on and off in AGCMs. The comparison is called Selected
Process On/Off Klima Inter-comparison Experiment (SPOOKIE) phase 2, which is
under the framework of Cloud Feedback Model Inter-comparison Project (CFMIP,
Webb et al., 2017). We expect that the SPOOKIE phase 2 will facilitate better
understanding of the connection between shallow convection and cloud
feedback.</p>
      <p id="d1e1865">The present study also has implications for the inter-model difference in the
CRE simulated by the CMIP5 MME. The SCRE and LCRE simulated by the CMIP5 MME
show a large inter-model spread. The spread is larger than that in the MIROC5
PPE; therefore, the observation data are within the range of the CMIP5
ensemble members for both the global mean and the zonal mean values (Dolinar
et al., 2015; Flato et al., 2013). This large spread in the CMIP5 MME stems
from the inter-model difference in both the model structure and specified
parameter settings. The results of the present study indicate that specified
parameter settings can explain only a small part of the inter-model spread in
the CMIP5 MME, suggesting that most of the spread is attributable to the
difference in the model structure. This is consistent with the view that
modifying the model structure is important for alleviating the biases in SCRE
and LCRE.</p>
      <p id="d1e1868">However, we should note that the results of the model evaluation presented
here depend on the design of the PPE experiment. For example, we restricted
the number of perturbed parameters to 10 and that of the PPE members to 56
based on the number of available computational resources. If we increased the
number of perturbed parameters and PPE members, the inter-model difference of
the TOA radiation and cloud biases might be larger than that of the present
study. The importance of the PPE design in obtaining large inter-model spread
is illustrated by Yamazaki et al. (2013), who conducted a PPE experiment with
an AOGCM, HadCM3. They perturbed 33 parameters to create 20 000 members in
the PPE experiment. Although they subsampled the PPE members so that the TOA
radiation balance is close to the observation, as was done by Shiogama et
al. (2012), they showed that the inter-model difference of the climate
sensitivity is larger than that of the MIROC5 PPE or the CMIP MME.</p>
      <p id="d1e1871">The choice of the model used for the PPE experiment is another important
factor. If we employed a model other than MIROC5, the biases in the TOA
radiation and clouds would be notably different from what we presented. Klein
et al. (2013) reported that the bias of having too many optically thick
clouds has been reduced from CFMIP1 to CFMIP2 MME, with the best models
having eliminated this bias. If we used a model with a very small bias in
optically thick clouds, we might be able to change the sign of the bias by
parameter tuning only. Therefore, the dominance of structure-oriented bias as
illustrated by the MIROC5 PPE does not necessarily indicate unimportance of
the parameter-oriented bias in general, as the latter is a function of the
former.</p>
      <p id="d1e1874">Another issue is whether we should include models with a large TOA radiation
imbalance in the PPE members. We did not include such models, assuming that
TOA radiation must be balanced in the pre-industrial climate simulations.
However, such models could also be included in the PPE if we applied flux
adjustment at the sea surface to suppress climate drift, which might increase
the parametric uncertainty of the biases compared with the present study. For
example, Yamazaki et al. (2013) reported that the parametric uncertainty of
the climate sensitivity increases by adopting models with a large TOA
radiation imbalance in their PPE experiment using the HadCM3 AOGCM. Collins
et al. (2006) also conducted a PPE experiment using the HadCM3 AOGCM with
flux adjustment. They showed that the parametric uncertainty of the TOA
shortwave radiation in the global and annual mean is <inline-formula><mml:math id="M83" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 20 W m<inline-formula><mml:math id="M84" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
which is much larger than the results in the present study.</p>
      <p id="d1e1897">If we did not adopt the SIS method in the MIROC5 PPE, namely, if we included
PPE members with large TOA radiation imbalance by applying flux adjustment,
how much larger would the inter-model spread become compared with this study?
To address this issue, we estimated inter-model spread of the TOA net
radiation in the MIROC5 PPE for two sets of ensemble members: (1) 5000
members created with Latin hypercube sampling, which include members with
large TOA radiative imbalance, and (2) 56 members with small TOA radiative
imbalance, which are selected with the SIS method from the 5000 members
in (1). We estimated the standard deviation for the two sets of ensemble
members, and the ratio of (1) to (2) is 6.25 to 1.0. Therefore, inter-model
spread of the TOA net radiation would be about 6 times larger if we did not
adopt the SIS method. For the sake of argument, we now assume that the 6-fold
increase in the inter-model spread occurs not only to the net radiation, but
also to the SCRE. In this case, observation data would be within the range of
the PPE spread in the global mean SCRE, in contrast to what we have seen in
Fig. 1c. However, as for the SCRE over the subtropical oceans as seen in
Fig. 3a, the observation data would still be outside the range of the PPE.
The above arguments are consistent with Yokohata et al. (2012), who evaluated
the SCRE bias of PPE experiments under present climate conditions. They used
output of the PPEs conducted with multiple GCMs, some of which employed flux
adjustment, and find that the SCRE cooling bias over the subtropical oceans
appears in almost all PPE members.</p>
</sec>
<sec id="Ch1.S7" sec-type="conclusions">
  <title>Conclusions</title>
      <p id="d1e1906">To discuss how much of the biases in the TOA
radiation and clouds can be removed by parameter tuning in the present-day
simulation with a climate model of the CMIP5 generation, we used a
low-resolution version of the MIROC5 AOGCM and compared the output of the PPE
experiment in the pre-industrial control setting with satellite observation
data. We evaluated the biases in the TOA radiation and clouds and quantified
the parametric uncertainty of the biases. We used the output of the PPE
experiment without flux adjustment, which is consistent with the experimental
design of the CMIP5. The results indicate that removing or changing the sign
of the biases by parameter tuning only is difficult. In particular, the
cooling bias of the SCRE at low latitudes could not be removed, neither in
the zonal mean nor at each latitude–longitude grid point. The bias was
related to the overestimation of both the cloud amount and cloud optical
thickness, which could not be removed by parameter tuning either. However,
they could be alleviated by tuning parameters such as the maximum cumulus
updraft velocity at the cloud base. On the other hand, the bias of the SCRE
in the Arctic was sensitive to parameter tuning. It could be removed by
tuning parameters such as the albedo of ice and snow both in the zonal mean
and at each grid point.</p>
      <p id="d1e1909">As discussed in Sect. 6, the obtained results of the PPE experiment are
dependent on the model and experimental design. In particular, inter-model
spread of the PPE is affected by employing the SIS method. Whether the
results are applicable to other models or PPE experiments remains to be
investigated further. However, the present study illustrates the benefit of
PPE experiments, which provide useful information regarding the model
development strategy, namely, the effectiveness and limitations of parameter
tuning. Based on the results of the present study, a parameterization for
shallow convection was implemented in MIROC6 to alleviate the cloud bias over
low-latitude oceans. Conducting PPE experiments with the future versions of
MIROC is advisable to update our knowledge about the parametric uncertainty,
which depends on the model structure; PPE experiments without flux adjustment
using AOGCMs other than MIROC5 would also be useful for evaluating the biases
in the simulated present climates, which are relevant for future projections
in the CMIP5 MME.</p><?xmltex \hack{\newpage}?>
</sec>

      
      </body>
    <back><notes notes-type="codedataavailability">

      <p id="d1e1917">Source code of MIROC5 associated with this study is
available to those who conduct collaborative research with the model users
under licence from copyright holders. For further information on how to
obtain the code, please contact the corresponding author. The data from the
model simulations and observations used in the analyses are available from
the corresponding author upon request.</p>
  </notes><?xmltex \hack{\clearpage}?><app-group>

<app id="App1.Ch1.S1">
  <title>Impact of parameter tuning on ISCCP cloud properties</title>
      <p id="d1e1929">The regression coefficients of the ISCCP cloud properties (cloud amount,
cloud optical thickness, and cloud top pressure) on tuning parameters are
shown here to help readers interpret the CRE changes in Figs. 7 and 8.</p>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.F1"><caption><p id="d1e1934">Regression coefficient of the annual mean ISCCP cloud amount on the
tuning parameters calculated using the 56 samples of the MIROC5 PPE. The
definition of the tuning parameters is shown in Table 1. The tuning
parameters are normalized to the range of [0, 1]. The black curves indicate
the threshold of the statistical significance with the 5 % level.</p></caption>
        <?xmltex \hack{\hsize\textwidth}?>
        <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017-f11.png"/>

      </fig>

<?xmltex \hack{\clearpage}?><?xmltex \floatpos{t}?><fig id="App1.Ch1.F2" specific-use="star"><caption><p id="d1e1948">Regression coefficient of the annual mean ISCCP cloud optical
thickness on the tuning parameters calculated using the 56 samples of the
MIROC5 PPE. The definition of the tuning parameters is shown in Table 1. The
tuning parameters are normalized to the range of [0, 1]. The black curves
indicate the threshold of the statistical significance with the 5 %
level.</p></caption>
        <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017-f12.png"/>

      </fig>

<?xmltex \hack{\clearpage}?><?xmltex \floatpos{t}?><fig id="App1.Ch1.F3" specific-use="star"><caption><p id="d1e1961">Regression coefficient of the annual mean ISCCP cloud top pressure
on the tuning parameters calculated using the 56 samples of the MIROC5 PPE.
The definition of the tuning parameters is shown in Table 1. The tuning
parameters are normalized to the range of [0, 1]. The black curves indicate
the threshold of the statistical significance with the 5 % level.</p></caption>
        <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/4647/2017/gmd-10-4647-2017-f13.png"/>

      </fig>

<?xmltex \hack{\clearpage}?>
</app>
  </app-group><notes notes-type="competinginterests">

      <p id="d1e1976">The authors declare that they have no conflict of
interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e1982">The authors thank Hideaki Kawai and two anonymous reviewers for valuable
discussion and comments. The
authors also thank Editage (<uri>www.editage.jp</uri>) for English language
editing. This work was supported by the Program for Risk Information on
Climate Change and the Integrated Research Program for Advancing Climate
Models of the Ministry of Education, Culture, Sports, Science and Technology
(MEXT), Japan. HS was supported by Grant-in-Aid 26281013 from the MEXT of
Japan. The Earth Simulator at JAMSTEC and NEC SX at NIES were used to perform
the model simulations.<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: Holger Tost <?xmltex \hack{\newline}?>
Reviewed by: two anonymous referees</p></ack><ref-list>
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    <!--<article-title-html>Effectiveness and limitations of parameter tuning in reducing biases of top-of-atmosphere radiation and clouds in MIROC version 5</article-title-html>
<abstract-html><p class="p">This study discusses how much of the biases in top-of-atmosphere (TOA)
radiation and clouds can be removed by parameter tuning in the present-day
simulation of a climate model in the Coupled Model Inter-comparison Project
phase 5 (CMIP5) generation. We used output of a perturbed parameter ensemble
(PPE) experiment conducted with an atmosphere–ocean general circulation
model (AOGCM) without flux adjustment. The Model for Interdisciplinary
Research on Climate version 5 (MIROC5) was used for the PPE experiment.
Output of the PPE was compared with satellite observation data to evaluate
the model biases and the parametric uncertainty of the biases with respect to
TOA radiation and clouds. The results indicate that removing or changing the
sign of the biases by parameter tuning alone is difficult. In particular, the
cooling bias of the shortwave cloud radiative effect at low latitudes could
not be removed, neither in the zonal mean nor at each latitude–longitude
grid point. The bias was related to the overestimation of both cloud amount
and cloud optical thickness, which could not be removed by the parameter
tuning either. However, they could be alleviated by tuning parameters such as
the maximum cumulus updraft velocity at the cloud base. On the other hand,
the bias of the shortwave cloud radiative effect in the Arctic was sensitive
to parameter tuning. It could be removed by tuning such parameters as albedo
of ice and snow both in the zonal mean and at each grid point. The obtained
results illustrate the benefit of PPE experiments which provide useful
information regarding effectiveness and limitations of parameter tuning.
Implementing a shallow convection parameterization is suggested as a
potential measure to alleviate the biases in radiation and clouds.</p></abstract-html>
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