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  <front>
    <journal-meta>
<journal-id journal-id-type="publisher">GMD</journal-id>
<journal-title-group>
<journal-title>Geoscientific Model Development</journal-title>
<abbrev-journal-title abbrev-type="publisher">GMD</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Geosci. Model Dev.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1991-9603</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>

    <article-meta>
      <article-id pub-id-type="doi">10.5194/gmd-10-1383-2017</article-id><title-group><article-title>Climate SPHINX: evaluating the impact of resolution and stochastic
physics parameterisations in the EC-Earth global climate model</article-title>
      </title-group><?xmltex \runningtitle{Climate SPHINX}?><?xmltex \runningauthor{P.~Davini et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff2">
          <name><surname>Davini</surname><given-names>Paolo</given-names></name>
          <email>pdavini@lmd.ens.fr</email>
        <ext-link>https://orcid.org/0000-0003-3389-7849</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>von Hardenberg</surname><given-names>Jost</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-5312-8070</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Corti</surname><given-names>Susanna</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-4456-6682</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4 aff5">
          <name><surname>Christensen</surname><given-names>Hannah M.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-8244-0218</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Juricke</surname><given-names>Stephan</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Subramanian</surname><given-names>Aneesh</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Watson</surname><given-names>Peter A. G.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5173-9903</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4 aff6 aff7">
          <name><surname>Weisheimer</surname><given-names>Antje</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-7231-6974</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Palmer</surname><given-names>Tim N.</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Laboratoire de Météorologie Dynamique/IPSL, Ecole Normale Supérieure,
PSL Research University, CNRS, Paris, France</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Institute of Atmospheric Sciences and Climate (ISAC-CNR), Bologna, Italy</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Institute of Atmospheric Sciences and Climate (ISAC-CNR), Torino, Italy</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Atmospheric, Oceanic and Planetary Physics, University of Oxford, Oxford, UK</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>National Center for Atmospheric Research (NCAR), Boulder, Colorado, USA</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>National Centre for Atmospheric Science (NCAS), University of Oxford, Oxford, UK</institution>
        </aff>
        <aff id="aff7"><label>7</label><institution>European Centre for Medium-Range Weather Forecasts (ECWMF), Reading, UK</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Paolo Davini (pdavini@lmd.ens.fr)</corresp></author-notes><pub-date><day>31</day><month>March</month><year>2017</year></pub-date>
      
      <volume>10</volume>
      <issue>3</issue>
      <fpage>1383</fpage><lpage>1402</lpage>
      <history>
        <date date-type="received"><day>7</day><month>May</month><year>2016</year></date>
           <date date-type="rev-request"><day>23</day><month>June</month><year>2016</year></date>
           <date date-type="rev-recd"><day>17</day><month>February</month><year>2017</year></date>
           <date date-type="accepted"><day>26</day><month>February</month><year>2017</year></date>
      </history>
      <permissions>
<license license-type="open-access">
<license-p>This work is licensed under a Creative Commons Attribution 3.0 Unported License. To view a copy of this license, visit <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/3.0/">http://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions><self-uri xlink:href="https://gmd.copernicus.org/articles/10/1383/2017/gmd-10-1383-2017.html">This article is available from https://gmd.copernicus.org/articles/10/1383/2017/gmd-10-1383-2017.html</self-uri>
<self-uri xlink:href="https://gmd.copernicus.org/articles/10/1383/2017/gmd-10-1383-2017.pdf">The full text article is available as a PDF file from https://gmd.copernicus.org/articles/10/1383/2017/gmd-10-1383-2017.pdf</self-uri>


      <abstract>
    <p>The Climate SPHINX (Stochastic Physics HIgh resolutioN eXperiments) project
is a comprehensive set of ensemble simulations aimed at evaluating the
sensitivity of present and future climate to model resolution and stochastic
parameterisation. The EC-Earth Earth system model is used to explore the
impact of stochastic physics in a large ensemble of 30-year climate
integrations at five different atmospheric horizontal resolutions (from
125 up to 16 km). The project includes more than 120 simulations in both a
historical scenario (1979–2008) and a climate change projection (2039–2068),
together with coupled transient runs (1850–2100). A total of 20.4 million
core hours have been used, made available from a single year grant from PRACE
(the Partnership for Advanced Computing in Europe), and close to 1.5 PB
of output data have been produced on SuperMUC IBM Petascale System at the
Leibniz Supercomputing Centre (LRZ) in Garching, Germany. About 140 TB of
post-processed data are stored on the CINECA supercomputing centre archives
and are freely accessible to the community thanks to an EUDAT data pilot
project. This paper presents the technical and scientific set-up of the
experiments, including the details on the forcing used for the simulations
performed, defining the SPHINX v1.0 protocol. In addition, an overview of
preliminary results is given. An improvement in the simulation of
Euro-Atlantic atmospheric blocking following resolution increase is observed.
It is also shown that including stochastic parameterisation in the low-resolution
runs helps to improve some aspects of the tropical climate –
specifically the Madden–Julian Oscillation and the tropical rainfall
variability. These findings show the importance of representing the impact of
small-scale processes on the large-scale climate variability either
explicitly (with high-resolution simulations) or stochastically (in low-resolution simulations).</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p>The simulation and prediction of Earth's climate is one of the scientific and
computational grand challenges. In order to make quantitative projections of
future climate, it is necessary to use climate models that simulate all the
important processes governing the evolution of the climate system. Over the
past few decades, climate models have developed considerably – increasing
both in complexity and resolution – as computational power has increased. Yet
there is a notable difference in the horizontal resolution of models used in
operational numerical weather prediction (NWP) and those used for climate
simulations in the fifth Coupled Model Intercomparison Project
<xref ref-type="bibr" rid="bib1.bibx83" id="paren.1"><named-content content-type="pre">CMIP5;</named-content></xref>. Atmospheric horizontal resolutions
in operational NWP are in the range of 16–40 km, whereas the resolution of CMIP5
climate models is (on average) coarser than 120 km.</p>
      <p>It is well known that a typical climate model is unable to represent many
sub-synoptic-scale systems, and only poorly represents smaller baroclinic
features. Typically climate models underestimate the number of observed
storms <xref ref-type="bibr" rid="bib1.bibx95" id="paren.2"/> and poorly simulate the statistics of
atmospheric mid-latitude blocking <xref ref-type="bibr" rid="bib1.bibx16" id="paren.3"/>. In fact it
has been shown <xref ref-type="bibr" rid="bib1.bibx89" id="paren.4"><named-content content-type="pre">e.g.</named-content></xref> that at standard
(low) climate resolution, forecast systems have pervasive systematic errors,
which impact on quasi-persistent weather regimes
<xref ref-type="bibr" rid="bib1.bibx20" id="paren.5"/> and, more generally, on temporal variability
and regional patterns of the leading modes of variability
<xref ref-type="bibr" rid="bib1.bibx22 bib1.bibx47" id="paren.6"/>. On the other hand,
recent experiments have shown that high-resolution climate models are
significantly better at simulating important physical processes, such as the
global water cycle <xref ref-type="bibr" rid="bib1.bibx23" id="paren.7"/>, as well as relevant
features of the large-scale atmospheric circulation such as the jet stream
<xref ref-type="bibr" rid="bib1.bibx53" id="paren.8"/>, the Euro-Atlantic blocking
<xref ref-type="bibr" rid="bib1.bibx40" id="paren.9"/> and the Madden–Julian Oscillation
<xref ref-type="bibr" rid="bib1.bibx64" id="paren.10"><named-content content-type="pre">MJO;</named-content></xref>.</p>
      <p>The fact that enhanced horizontal resolution in climate models can positively
impact some aspects of the simulated large-scale atmospheric circulation is
further evidence of the role that small-scale processes play in “shaping”
large-scale motions. However, it is unlikely that climate integrations at
very high resolution (i.e. at the resolution used in NWP), will be feasible
in the near future. There are numerous other areas of climate model
development that compete for the given computing resources, e.g. the
need for ensembles of integrations, the need to integrate over century and
longer timescales, and the need to incorporate additional Earth system
complexity. In addition, parameterisations, which have been developed for
coarse scales, may need retuning or to be replaced with alternative
parameterisations at higher resolutions, which require a consistent development
effort.</p>
      <p>Instead of explicitly resolving small-scale processes by increasing the
resolution of climate models, a possible alternative is to use stochastic
parameterisation schemes. There has been significant progress in developing
stochastic schemes over the last decade, primarily for use in medium-range
and seasonal ensemble forecasts <xref ref-type="bibr" rid="bib1.bibx66 bib1.bibx43 bib1.bibx5 bib1.bibx31 bib1.bibx27 bib1.bibx71 bib1.bibx61" id="paren.11"><named-content content-type="pre">e.g.</named-content></xref>.
These schemes introduce an element of randomness
into physical parameterisation schemes to account for the impact of
uncertain, unresolved processes on the resolved-scale flow
<xref ref-type="bibr" rid="bib1.bibx62" id="paren.12"/>. Stochastic schemes have been shown to improve the
reliability of probabilistic forecasts on medium-range and seasonal
timescales, as well as improving biases in the mean state.</p>
      <p>There is mounting evidence that stochastic parameterisations can also prove
beneficial for climate simulations
<xref ref-type="bibr" rid="bib1.bibx51 bib1.bibx52 bib1.bibx2" id="paren.13"><named-content content-type="pre">e.g.</named-content></xref>.
<xref ref-type="bibr" rid="bib1.bibx8" id="normal.14"/> showed that including stochastic physics can
reduce systematic biases in the model's mean climate, comparable to
improvements gained by increasing the model resolution. Several recent papers
have also demonstrated that the variability of a climate model can
significantly improve with the introduction of a stochastic physics scheme,
with improvements observed in the representation of the MJO <xref ref-type="bibr" rid="bib1.bibx24 bib1.bibx90" id="paren.15"/>, the El
Niño–Southern Oscillation <xref ref-type="bibr" rid="bib1.bibx13" id="paren.16"/> and
extra-tropical flow regimes
<xref ref-type="bibr" rid="bib1.bibx91 bib1.bibx19 bib1.bibx12" id="paren.17"/>.
As was the case for the mean state, the observed improvements can be similar
to that observed on increasing the resolution of the model
<xref ref-type="bibr" rid="bib1.bibx20" id="paren.18"/>.</p>
      <p>These results highlight the influence of small-scale processes on large-scale
climate variability, and indicate that although simulating variability at
small scales is a necessity, it may not be necessary to represent the
small scales accurately, or even explicitly, in order to improve the
simulation of large-scale climate. This issue is important in light of
the next CMIP6 project. In fact, it seems quite unrealistic that in the near
future climate simulations at NWP resolution could be affordable. However,
resolutions around 40 km might be more feasible and indeed they are planned
within the HighResMIP project <xref ref-type="bibr" rid="bib1.bibx32" id="paren.19"/>.</p>
      <p>In the coordinated project Climate SPHINX (Stochastic Physics HIgh resolutioN eXperiments),
we use the EC-Earth Earth system model
<xref ref-type="bibr" rid="bib1.bibx33 bib1.bibx34" id="paren.20"><named-content content-type="post"><uri>http://www.ec-earth.org</uri></named-content></xref>
to investigate the sensitivity of climate simulations to model resolution and
stochastic parameterisations. A key aim of the study is to investigate the
degree to which stochastic parameterisation schemes can be used as a
computationally cheaper alternative to increased model resolution.</p>
      <p>The experiments follow one historical and one scenario projection following
CMIP5 specifications in AMIP configuration (i.e. atmosphere-only integrations
forced with observed – for the past – and simulated – for the future –
sea surface temperatures). The AMIP integrations have been carried out
keeping constant the vertical resolution (91 levels) and exploring five
different horizontal resolutions: (i) low (<inline-formula><mml:math id="M1" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 125 km), (ii) moderate
(<inline-formula><mml:math id="M2" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 80 km), (iii) intermediate (<inline-formula><mml:math id="M3" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 40 km), (iv) high
(<inline-formula><mml:math id="M4" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 25 km) and (v) very high (<inline-formula><mml:math id="M5" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 16 km). Each integration is
repeated with the joint implementation of two stochastic parameterisations:
the Stochastically Perturbed Parameterisation Tendencies (SPPT) scheme
<xref ref-type="bibr" rid="bib1.bibx63" id="paren.21"/> and the Stochastic Kinetic Energy Backscatter
(SKEB) scheme <xref ref-type="bibr" rid="bib1.bibx75 bib1.bibx63" id="paren.22"/>. In order to
sample the natural variability, several ensemble members are produced for
each configuration. The simulations (ii–iv) aim to investigate whether
configurations with intermediate horizontal resolution are able to partially
bridge the gap between very high and low resolution. In other words, a
<?xmltex \hack{\mbox\bgroup}?>systematic<?xmltex \hack{\egroup}?> comparison is useful to understand whether a gradual increase in
resolution will lead to a similar gradual improvement of climate simulations
or whether there is a true passing threshold in resolution, which is required
to get acceptable simulations of the main climate features.</p>
      <p>By comparing integrations carried out at different resolutions, we evaluate
the impact of increased atmospheric horizontal resolution on the simulation
of key climate processes and of climate variability. By comparing experiments
with and without the implementation of stochastic physics, we evaluate the
impact of stochastic physics on the simulation of key climate process and of
the associated climate variability when the model resolution is the same. By
comparing experiments with the implementation of stochastic physics with
experiments carried out without stochastic physics, but at higher
resolutions, we assess to what extent the stochastic representation of the
sub-grid processes can compete with a more refined horizontal resolution. The
results of this project integrate with several other efforts currently
underway (e.g. the European Union's Horizon 2020 PRIMAVERA project,
<uri>https://www.primavera-h2020.eu/</uri>). In particular this study complements
groundbreaking past initiatives in pioneering the use of HPC (high-performance Computing) for climate
simulations such as the UPSCALE <xref ref-type="bibr" rid="bib1.bibx58" id="paren.23"/> and the ATHENA
<xref ref-type="bibr" rid="bib1.bibx47" id="paren.24"/> projects.</p>
      <p>Climate SPHINX was made possible by a considerable amount of computing time
provided by PRACE (the Partnership for Advanced Computing in Europe) and
data storage from EUDAT (the collaborative pan-European infrastructure
providing research data services). We were granted 20 million core hours
during a single year at SuperMUC, the IBM Petascale System at the
Leibniz Supercomputing Centre (LRZ) in Garching near Munich, Germany. Storage of data
produced by Climate SPHINX is secured by the EUDAT pilot project DATA SPHINX
(DATA Storage and Preservation of High-resolution climate eXperiments), which
provides a widely accessible archive for medium-term storage to facilitate
data access and discovery. DATA SPHINX is managed by CINECA (the largest
Italian computing centre) and at present hosts 140 TB of data generated by
Climate SPHINX.</p>
      <p>In this paper we describe in detail the important technical aspects of this
project and highlight some preliminary scientific results on the impact of
increased resolution and stochastic parameterisations on climate simulations.
Model configuration and tuning are presented in Sect. <xref ref-type="sec" rid="Ch1.S2"/>,
while the experimental set-up is described in Sect. <xref ref-type="sec" rid="Ch1.S3"/>.
Section <xref ref-type="sec" rid="Ch1.S4"/> is devoted to detail the technical configuration. An
overview of results and concluding remarks are reported in
Sects. <xref ref-type="sec" rid="Ch1.S5"/> and <xref ref-type="sec" rid="Ch1.S6"/>, which is followed by the “Data availability” section.</p>
</sec>
<sec id="Ch1.S2">
  <title>The EC-Earth global climate model</title>
      <p>In Climate SPHINX, version 3.1 of the state-of-the-art EC-Earth atmosphere–ocean Earth
system model
<xref ref-type="bibr" rid="bib1.bibx33 bib1.bibx34" id="paren.25"/> has been used.</p>
      <p>The atmospheric component of EC-Earth is based on cycle 36r4 of the
Integrated Forecast System (IFS) circulation model <xref ref-type="bibr" rid="bib1.bibx29" id="paren.26"/>,
which has been developed by the European Centre for Medium-Range Weather
Forecasts (ECMWF). This has been tuned and improved for climate purposes by
the EC-Earth consortium. IFS uses a combination of spectral and reduced
Gaussian grids (where, in the latter, the number of longitudinal grid points
decreases towards the poles). Physical parameterisations and advection are
computed on the reduced Gaussian grid and then, using the spectral transform,
semi-implicit time stepping is performed in the spectral space.</p>
      <p>Traditionally, the spectral harmonic at which truncation occurs defines the
horizontal resolution; IFS uses a linear triangular truncation for which a
specified number of N harmonics retained corresponds to <inline-formula><mml:math id="M6" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>(</mml:mo><mml:mi>N</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> grid points
along the Equator. If the resolution is T255, this means that post-processed
output will have 512 <inline-formula><mml:math id="M7" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 256 grid points on a regular Gaussian grid,
which corresponds to a resolution of about 80 km at the Equator. The
description of the main parameterisation schemes within IFS can be found in
<xref ref-type="bibr" rid="bib1.bibx4" id="text.27"/>; the parameterisations are in general
independent of resolution, with the only exception of the convective
adjustment time, which decreases with increasing resolution as reported in
Table <xref ref-type="table" rid="Ch1.T1"/>.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><caption><p>Resolution-dependent scientific configuration for EC-Earth in the
Climate SPHINX experiments. The same number of ensemble members has been run
for present-day AMIP (PDA) and future scenario AMIP (FSA) experiments. T255C
is the coupled configuration used for past-to-future coupled (PFC)
simulations. Resolution is estimated at the Equator. The number of members
indicate the deterministic and stochastic members. Backscatter ratio (tuning
parameter for SKEB stochastic scheme), convective adjustment time (tuning
parameter for deep convection) and momentum launch (tuning parameter for
non-orographic gravity waves) are unitless.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Truncation</oasis:entry>  
         <oasis:entry colname="col2">Resolution</oasis:entry>  
         <oasis:entry colname="col3">No. of members</oasis:entry>  
         <oasis:entry colname="col4">Time step</oasis:entry>  
         <oasis:entry colname="col5">Backscatter ratio</oasis:entry>  
         <oasis:entry colname="col6">Conv. adj. time</oasis:entry>  
         <oasis:entry colname="col7">Mom. launch</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">T159</oasis:entry>  
         <oasis:entry colname="col2">125.2 km</oasis:entry>  
         <oasis:entry colname="col3">10 <inline-formula><mml:math id="M8" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 10</oasis:entry>  
         <oasis:entry colname="col4">3600 s</oasis:entry>  
         <oasis:entry colname="col5">0.032</oasis:entry>  
         <oasis:entry colname="col6">2.6</oasis:entry>  
         <oasis:entry colname="col7">0.00375</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T255</oasis:entry>  
         <oasis:entry colname="col2">78.3 km</oasis:entry>  
         <oasis:entry colname="col3">10 <inline-formula><mml:math id="M9" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 10</oasis:entry>  
         <oasis:entry colname="col4">2700 s</oasis:entry>  
         <oasis:entry colname="col5">0.040</oasis:entry>  
         <oasis:entry colname="col6">2.0</oasis:entry>  
         <oasis:entry colname="col7">0.00375</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T511</oasis:entry>  
         <oasis:entry colname="col2">39.1 km</oasis:entry>  
         <oasis:entry colname="col3">6 <inline-formula><mml:math id="M10" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 6</oasis:entry>  
         <oasis:entry colname="col4">900 s</oasis:entry>  
         <oasis:entry colname="col5">0.085</oasis:entry>  
         <oasis:entry colname="col6">1.5</oasis:entry>  
         <oasis:entry colname="col7">0.00375</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T799</oasis:entry>  
         <oasis:entry colname="col2">25.0 km</oasis:entry>  
         <oasis:entry colname="col3">3 <inline-formula><mml:math id="M11" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 3</oasis:entry>  
         <oasis:entry colname="col4">720 s</oasis:entry>  
         <oasis:entry colname="col5">0.095</oasis:entry>  
         <oasis:entry colname="col6">1.3</oasis:entry>  
         <oasis:entry colname="col7">0.00368</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">T1279</oasis:entry>  
         <oasis:entry colname="col2">15.7 km</oasis:entry>  
         <oasis:entry colname="col3">1 <inline-formula><mml:math id="M12" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 1</oasis:entry>  
         <oasis:entry colname="col4">600 s</oasis:entry>  
         <oasis:entry colname="col5">0.095</oasis:entry>  
         <oasis:entry colname="col6">1.2</oasis:entry>  
         <oasis:entry colname="col7">0.00334</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T255C</oasis:entry>  
         <oasis:entry colname="col2">78.3 km</oasis:entry>  
         <oasis:entry colname="col3">3 <inline-formula><mml:math id="M13" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 3</oasis:entry>  
         <oasis:entry colname="col4">2700 s</oasis:entry>  
         <oasis:entry colname="col5">0.040</oasis:entry>  
         <oasis:entry colname="col6">2.0</oasis:entry>  
         <oasis:entry colname="col7">0.00375</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p>To represent land-surface dynamics, IFS integrates the Hydrology Tiled ECMWF
Scheme of Surface Exchanges over Land (H-TESSEL) land-surface scheme
<xref ref-type="bibr" rid="bib1.bibx3" id="paren.28"/>. When used in coupled mode, the Nucleus for
European Modelling of the Ocean (NEMO) version 3.3.1 oceanic circulation
model <xref ref-type="bibr" rid="bib1.bibx55" id="paren.29"/> is used; this makes use of a tripolar grid with
the poles placed over northern Siberia, North America and Antarctica. NEMO
includes the Louvain la Neuve (LIM) sea ice model version 3
<xref ref-type="bibr" rid="bib1.bibx88" id="paren.30"/>. The atmospheric and oceanic components
are coupled through OASIS3 <xref ref-type="bibr" rid="bib1.bibx87" id="paren.31"/>, with a coupling frequency
of 3 h.</p>
<sec id="Ch1.S2.SS1">
  <title>The stochastic physics parameterisation schemes</title>
      <p>We consider two complementary approaches to stochastic parameterisation, both
developed at ECMWF for IFS. The two schemes considered here are used
operationally at weather and seasonal forecasting centres worldwide
<xref ref-type="bibr" rid="bib1.bibx63 bib1.bibx94 bib1.bibx9 bib1.bibx72" id="paren.32"/>,
and so have been extensively tested in a range of models on medium range and
seasonal timescales. Following the “seamless prediction” paradigm, we
choose to test these schemes here on climate timescales.</p>
      <p>The first approach is the SPPT scheme <xref ref-type="bibr" rid="bib1.bibx63" id="paren.33"/>, which uses
multiplicative noise to represent model uncertainty due to the
parameterisation process. The use of multiplicative noise has been motivated
through several coarse-graining studies
(<?xmltex \hack{\mbox\bgroup}?><xref ref-type="bibr" rid="bib1.bibx77" id="altparen.34"/><?xmltex \hack{\egroup}?>;
<?xmltex \hack{\mbox\bgroup}?><xref ref-type="bibr" rid="bib1.bibx76" id="altparen.35"/><?xmltex \hack{\egroup}?>). SPPT can be expressed as
            <disp-formula id="Ch1.E1" content-type="numbered"><mml:math id="M14" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>X</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi>D</mml:mi><mml:mo>+</mml:mo><mml:mi>K</mml:mi><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mi>e</mml:mi><mml:mo>)</mml:mo><mml:munder><mml:mo movablelimits="false">∑</mml:mo><mml:mi>i</mml:mi></mml:munder><mml:msub><mml:mi>P</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M15" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>X</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:math></inline-formula> is the modelled total tendency in <inline-formula><mml:math id="M16" display="inline"><mml:mi>X</mml:mi></mml:math></inline-formula>.
This is the sum of <inline-formula><mml:math id="M17" display="inline"><mml:mi>D</mml:mi></mml:math></inline-formula>, the dynamical tendency, <inline-formula><mml:math id="M18" display="inline"><mml:mi>K</mml:mi></mml:math></inline-formula>, the horizontal
diffusion, and each <inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> term, with <inline-formula><mml:math id="M20" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> being the tendency from the
<inline-formula><mml:math id="M21" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>th physics scheme. The zero mean random perturbation, <inline-formula><mml:math id="M22" display="inline"><mml:mi>e</mml:mi></mml:math></inline-formula>, is constant
in the vertical, but <inline-formula><mml:math id="M23" display="inline"><mml:mi mathvariant="italic">μ</mml:mi></mml:math></inline-formula> tapers the perturbation to zero close to the
surface and in the stratosphere. The scheme acts on the tendencies of the
physical fields (i.e. temperature, winds and specific humidity) resulting
from the five main parameterisation schemes: radiation, turbulence and
gravity wave drag, non-orographic gravity wave drag, convection, and large-scale water processes. All variables are perturbed with the same random
number.</p>
      <p>The perturbation, <inline-formula><mml:math id="M24" display="inline"><mml:mi>e</mml:mi></mml:math></inline-formula>, is generated using a spectral pattern generator
<xref ref-type="bibr" rid="bib1.bibx7" id="paren.36"/>, ensuring that it smoothly varies in space,
while the patterns evolve in time following an AR(1) process. The
perturbation at each time step is the sum of three independent random fields,
which represent uncertainties on different temporal and spatial scales. The
fields have horizontal correlations of 500, 1000 and 2000 km and temporal
decorrelations of 6 h, 3 days and 30 days respectively, with associated standard
deviations of 0.52, 0.18 and 0.06. The magnitude of the perturbation has been
motivated through coarse-graining high-resolution model simulations
<xref ref-type="bibr" rid="bib1.bibx76" id="paren.37"/>, and a recent coarse-graining study has also
provided justification for the noise temporal and spatial correlation scales
<xref ref-type="bibr" rid="bib1.bibx14" id="paren.38"/>. While the smallest scale (500 km
and 6 h) dominates on weather forecasting timescales, it is expected that
the larger scales will also be important on climate timescales. The SPPT
scheme requires no retuning with changing horizontal resolution: the same
noise characteristics are used operationally at ECMWF across model
resolutions. This is because the multiplicative nature of the scheme applied
to the total of all parameterised physical tendencies results in
perturbations to the model that scale automatically as the parameterised
tendencies scale with resolution. The resolution dependence of the individual
contributions from the parameterisation schemes is implicitly dealt with at
the (deterministic) parameterisation level.</p>
      <p>In contrast to SPPT, the SKEB scheme
aims to represent a physical process that is otherwise absent from the model
<xref ref-type="bibr" rid="bib1.bibx75 bib1.bibx63" id="paren.39"/>. Kinetic energy loss is common
in models due to numerical integration schemes and the parameterisation
process <xref ref-type="bibr" rid="bib1.bibx7" id="paren.40"/>. To counteract this, the SKEB scheme
represents upscale transfer of kinetic energy by randomly perturbing the
stream function.</p>
      <p>Similar to SPPT, the SKEB scheme uses a spectral pattern generator to
generate a spatially and temporally correlated perturbation field, which is
added at each time step to the deterministic stream function tendency,
            <disp-formula id="Ch1.E2" content-type="numbered"><mml:math id="M25" display="block"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mtext>t</mml:mtext></mml:msub></mml:mrow><mml:mo mathvariant="normal">˙</mml:mo></mml:mover><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mtext>det</mml:mtext></mml:msub></mml:mrow><mml:mo mathvariant="normal">˙</mml:mo></mml:mover><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mi>f</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M26" display="inline"><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mtext>t</mml:mtext></mml:msub></mml:mrow><mml:mo mathvariant="normal">˙</mml:mo></mml:mover></mml:math></inline-formula> is the total stream function tendency,
<inline-formula><mml:math id="M27" display="inline"><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mtext>det</mml:mtext></mml:msub></mml:mrow><mml:mo mathvariant="normal">˙</mml:mo></mml:mover></mml:math></inline-formula> is the deterministic tendency and <inline-formula><mml:math id="M28" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> is the additive
perturbation field. The perturbation field is expressed in spherical
harmonics, and each coefficient is evolved separately in time following an
AR(1) process. A tuning parameter for the SKEB scheme, the backscatter ratio,
is set to increase following resolution increase (see
Table <xref ref-type="table" rid="Ch1.T1"/>; following practice at ECMWF) in order to improve the
slope of the kinetic energy spectrum.</p>
      <p>The standard SPPT and SKEB schemes were designed for use at NWP timescales.
When implemented in the EC-Earth climate model, it was found that the SPPT
scheme resulted in a large imbalance involving the water cycle, with a
negative precipitation minus evaporation (<inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>-</mml:mo><mml:mi>E</mml:mi></mml:mrow></mml:math></inline-formula>) that was 10 times larger than in the deterministic model
associated with an anomalous latent heat flux and a negative net surface flux
of about 2 <inline-formula><mml:math id="M30" display="inline"><mml:mrow><mml:mi mathvariant="normal">W</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>. This arises because the SPPT scheme was not
designed specifically to conserve water vapour, and resulted in a water
vapour sink in the atmosphere. A fix has been implemented, requiring that the
global average of the tendencies (i.e. winds, temperature and more
importantly specific humidity) before and after the SPPT perturbation is
conserved. The new scheme removes the imbalance in <inline-formula><mml:math id="M31" display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>-</mml:mo><mml:mi>E</mml:mi></mml:mrow></mml:math></inline-formula>, which is now equal
to that in the run where the SPPT scheme is disabled. This fix has
subsequently been implemented at ECMWF <xref ref-type="bibr" rid="bib1.bibx49" id="paren.41"/>.</p>
      <p>Hereafter, Climate SPHINX simulations where stochastic parameterisation is
operational will be defined as “stochastic” runs, while simulations where
the scheme is deactivated will be mentioned as “deterministic” runs.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Model tuning</title>
      <p>With respect to the previous version (v3.0.1), EC-Earth 3.1 shows a reduced
radiative imbalance and an improved hydrological cycle
<xref ref-type="bibr" rid="bib1.bibx18" id="paren.42"/>. However, it still exhibits a cold bias in
both its atmosphere-only and coupled configuration and a small imbalance in
<inline-formula><mml:math id="M32" display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>-</mml:mo><mml:mi>E</mml:mi></mml:mrow></mml:math></inline-formula>. In a “present day” AMIP
configuration, the 3.1 version is too cold, extracting heat from the
underlying sea surface temperatures (SSTs) by about 1.5 <inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:mi mathvariant="normal">W</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> and
showing unrealistically high values for net SW (shortwave)
and LW (longwave)
fluxes at TOA (top of the atmosphere)  (around
243–244 <inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:mi mathvariant="normal">W</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>). Thus, the first goal of the tuning was to provide
reasonable radiative fluxes at TOA and at the surface for the standard
deterministic version of the model (T255; see next paragraph for further
description on the configurations adopted).</p>
      <p>To improve the radiation budget, some of the convection and microphysical
parameters from a more recent version of IFS (cy40r1) were retrieved. In
addition to this, two standard tuning parameters have been modified
<xref ref-type="bibr" rid="bib1.bibx57" id="paren.43"><named-content content-type="pre">see</named-content></xref>; the entrainment rate for organised
convection (ENTRORG)
was reduced from <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.75</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.5</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, and the rate of conversion of liquid water to rain
(RPRCON) was
reduced from <inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.4</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>.</p>
      <p>The optimal choice of tuning parameters provides reasonable fluxes at the TOA
(around 240 <inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:mi mathvariant="normal">W</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) and a positive flux at the surface of about
0.6 <inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:mi mathvariant="normal">W</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, in accordance with the best estimates from
observations <xref ref-type="bibr" rid="bib1.bibx93" id="paren.44"/>. It is important to note that the
tuning of the radiative fluxes has been carried out only for the T255
deterministic model version: the radiative balance has not been tuned in the
higher resolution or stochastic models. This ensures a clean comparison
between simulations at different resolutions and with and without stochastic
physics. If the model were re-tuned for each run, it is not possible to
determine whether it is changing the tuning parameters, changing the
resolution or including stochastic physics that are responsible
<xref ref-type="bibr" rid="bib1.bibx32" id="paren.45"/>. Including the SPPT scheme led to a negative
bias in the surface heat fluxes of about 0.8 <inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:mi mathvariant="normal">W</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, likely caused
by a different distribution of the clouds.</p>
      <p>The main radiative fluxes resulting after the complete tuning procedure are
reported in Table <xref ref-type="table" rid="Ch1.T2"/>. As shown in this table, the radiative
balance of the model at higher resolution (and with stochastic physics) shows
larger TOA SW and LW with increasing resolution. Net surface fluxes are
highly variable, with higher values for coarser resolutions.<?xmltex \hack{\newpage}?></p>
      <p>Finally, a supplementary modification – derived from a more recent IFS cycle
– has been performed in order to produce a realistic quasi-biennial oscillation
(QBO) at all resolutions. The EC-Earth 3.1 non-orographic gravity
waves scheme is characterised by a momentum flux that is continuously
launched in the mid-troposphere to simulate the effect of gravity waves.
The latitudinal profile of this momentum flux governs the correct
parameterisation of gravity waves: a too high amplitude of the momentum flux
will disturb the QBO in equatorial zones, particularly at high resolutions,
while a too low value will lead to unrealistic eddy-driven jets, especially
in the Southern Hemisphere, where orographically induced wave drag is low.
With the current latitudinal profile, the QBO was simulated only at standard
resolution (T255 with 91 vertical levels). Following advice from ECMWF staff,
a resolution-dependent parameterisation of non-orographic gravity wave drag
replaced the version-dependent parameterisation present in EC-Earth 3.1 (an
ad hoc parameterisation developed for the ECMWF System 4 seasonal forecast
system). Namely, instead of using a low-momentum flux average value
(GFLUXLAUN <inline-formula><mml:math id="M42" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.02) with a positive Gaussian peak at 50<inline-formula><mml:math id="M43" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S, we
use a higher value (GFLUXLAUN <inline-formula><mml:math id="M44" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.0375), which is reduced with a Gaussian
shape at the Equator. This negative peak is slightly deeper for stochastic
runs than for deterministic simulations to compensate for the effect of the
stochastic noise. The average value of the momentum flux was further reduced
with increasing resolution (starting from T799) according to the ECMWF
specification for IFS cy40r1 (see Table <xref ref-type="table" rid="Ch1.T1"/>).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2"><caption><p>Radiative fluxes expressed in <inline-formula><mml:math id="M45" display="inline"><mml:mrow><mml:mi mathvariant="normal">W</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for the reference
experiment (i.e. the first simulation run) at different resolution for present-day AMIP (PDA)
simulations. D stands for deterministic simulation, S for stochastic. Fluxes
have been tuned for T255D.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Simulation</oasis:entry>  
         <oasis:entry colname="col2">Net Sfc</oasis:entry>  
         <oasis:entry colname="col3">Net TOA</oasis:entry>  
         <oasis:entry colname="col4">TOA SW</oasis:entry>  
         <oasis:entry colname="col5">TOA LW</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">T159D</oasis:entry>  
         <oasis:entry colname="col2">1.57</oasis:entry>  
         <oasis:entry colname="col3">1.22</oasis:entry>  
         <oasis:entry colname="col4">239.93</oasis:entry>  
         <oasis:entry colname="col5">238.71</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T159S</oasis:entry>  
         <oasis:entry colname="col2">0.75</oasis:entry>  
         <oasis:entry colname="col3">0.33</oasis:entry>  
         <oasis:entry colname="col4">239.32</oasis:entry>  
         <oasis:entry colname="col5">238.99</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T255D</oasis:entry>  
         <oasis:entry colname="col2">0.67</oasis:entry>  
         <oasis:entry colname="col3">0.41</oasis:entry>  
         <oasis:entry colname="col4">240.23</oasis:entry>  
         <oasis:entry colname="col5">239.82</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T255S</oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.16</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col3"><inline-formula><mml:math id="M47" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.49</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4">239.65</oasis:entry>  
         <oasis:entry colname="col5">240.14</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T511D</oasis:entry>  
         <oasis:entry colname="col2">0.16</oasis:entry>  
         <oasis:entry colname="col3">1.05</oasis:entry>  
         <oasis:entry colname="col4">241.50</oasis:entry>  
         <oasis:entry colname="col5">240.44</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T511S</oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.75</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col3">0.19</oasis:entry>  
         <oasis:entry colname="col4">241.07</oasis:entry>  
         <oasis:entry colname="col5">240.88</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T799D</oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.12</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col3">1.16</oasis:entry>  
         <oasis:entry colname="col4">242.10</oasis:entry>  
         <oasis:entry colname="col5">240.94</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T799S</oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.82</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col3">0.47</oasis:entry>  
         <oasis:entry colname="col4">241.78</oasis:entry>  
         <oasis:entry colname="col5">241.31</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T1279D</oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math id="M51" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.09</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col3">1.44</oasis:entry>  
         <oasis:entry colname="col4">242.58</oasis:entry>  
         <oasis:entry colname="col5">241.14</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T1279S</oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.09</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col3">0.41</oasis:entry>  
         <oasis:entry colname="col4">242.16</oasis:entry>  
         <oasis:entry colname="col5">241.74</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p>Sfc: surface; TOA: top of the atmosphere; SW: shortwave; LW:
longwave.</p></table-wrap-foot></table-wrap>

      <p>The new non-orographic gravity wave scheme – a standard in the current
operational forecast ECMWF model – allows for the simulation of the QBO at all
the resolutions explored in Climate SPHINX, without deteriorating the jet
streams. Given these positive results, the new parameterisation will be
implemented in the upcoming EC-Earth 3.2 version.<?xmltex \hack{\newpage}?></p>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>Science configuration: the SPHINX v1.0 protocol</title>
      <p>The following sections describe the scientific configuration, including the
simulations performed, the initial and boundary conditions, the SST and
sea ice concentration (SIC) used that together define
the SPHINX v1.0 protocol.</p>
<sec id="Ch1.S3.SS1">
  <title>Climate SPHINX simulations</title>
      <p>Climate SPHINX simulations are grouped into three main blocks: present-day AMIP (PDA),
future scenario AMIP (FSA) and past-to-future coupled (PFC). PDA
and FSA are atmosphere-only simulations: 20 ensemble members are run at T159
(<inline-formula><mml:math id="M53" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 125 km), 20 at T255 (<inline-formula><mml:math id="M54" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 80 km), 12 at T511 (<inline-formula><mml:math id="M55" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 40 km),
6 at T799 (<inline-formula><mml:math id="M56" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 25 km) and 2 at T1279 (<inline-formula><mml:math id="M57" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 16 km) for both PDA
and FSA experiments. For each resolution, half of the ensemble members have
the stochastic physics parameterisations activated. All simulations have the
same vertical grid with 91 levels (L91): these are hybrid levels with the
last full level at 0.01 hPa. The number of ensemble members run and their
resolution are also reported in Table <xref ref-type="table" rid="Ch1.T1"/>.</p>
      <p>The atmosphere-only experiments extend for 30 consecutive years, from 1979
to 2008 for PDA, while FSA experiments are run from 2039 to 2068.</p>
      <p>PFC simulations are run with IFS at the T255L91 configuration, coupled with
NEMO using the ORCA1 grid (a tripolar grid with resolution of 1<inline-formula><mml:math id="M58" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>
longitudinally and refinement to <inline-formula><mml:math id="M59" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M60" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> at the Equator) with 46
vertical levels. The upper model level is at ca. 3 m and 10 levels are in
the upper 100 m. Six ensemble members are run, three with the stochastic
parameterisation active and three control members without stochastic
parameterisation, from 1850 to 2100.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <title>Initial conditions</title>
      <p>The initial conditions (ICs) in both the PDA and FSA experiments are taken
from the ECMWF ERA-Interim Reanalysis <xref ref-type="bibr" rid="bib1.bibx21" id="paren.46"/> for
1 January 1979. A first experiment is run at each resolution for a few days,
and it is used to create the ICs for the other experiments. For instance, for
T255 experiments, the ICs for the 10 ensemble members are extracted using the
midnight values (00:00) from each of the first 10 days respectively, and then
reassigned to 1 January.</p>
      <p>The same ICs are used also for FSA: in order to account for the land-surface
adjustment to the new forcing, a 1-year spin-up has been carried out for FSA
(which is therefore starting from 2038).</p>
      <p>For PFC simulations, given the different expected climatologies of
integrations with/without stochastic physics, two 320-year spin-ups are
carried out in coupled mode to equilibrate the ocean to the atmospheric
forcing. Having spun-up, three oceanic states – from spin-up year 300, 310
and 320 – are coupled with three different atmospheric ICs; these are run in
coupled mode for a further 10 years with fixed greenhouse gas (GHG) forcing
for the year 1850. In this way the phase space distance between the
simulations is 20 years and the atmosphere and land surface have had enough
time to adjust to the new oceanic state.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><caption><p><bold>(a, b)</bold> HadISST 2.1.1 climatology for the SSTs <bold>(a)</bold>
and SIC <bold>(b)</bold> for the 1979–2008 period. <bold>(c, d)</bold> Climatological
changes between the FutureHadISST 2.1.1 dataset and the HadISST 2.1.1 dataset
for SST <bold>(c)</bold> and SIC <bold>(d)</bold>.</p></caption>
          <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/1383/2017/gmd-10-1383-2017-f01.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS3">
  <title>Forcing and boundary conditions</title>
      <p>Well-mixed GHGs, stratospheric ozone and volcanic aerosol
concentrations have been set according to the CMIP5 protocol
<xref ref-type="bibr" rid="bib1.bibx60 bib1.bibx83" id="paren.47"/>. Historical forcing is used
for PDA experiments, whereas for the FSA experiments the high emission
scenario (Representative Concentration Pathway 8.5, RCP8.5) is adopted. PFC
simulations use the historical CMIP5 specification from year 1850 to year
2005 included; after that, the forcing is taken from the RCP8.5 scenario.
Albedo, land use and vegetation patterns are set using the standard
configuration of EC-Earth 3.1, which uses a MODIS-derived fixed
climatological seasonal cycle for snow-free albedo and the leaf area index.
The average yearly solar irradiance was set at 1368.2 <inline-formula><mml:math id="M61" display="inline"><mml:mrow><mml:mi mathvariant="normal">W</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> with
intrannual variations, following the standard EC-Earth 3.1 set-up. All the
simulations of PDA and FSA experiments use this set-up. For the PFC
simulations interannual variations following CMIP5 prescriptions (i.e. the
11-year solar cycle) have been added.</p>
</sec>
<sec id="Ch1.S3.SS4">
  <title>Present-day SST and SIC</title>
      <p>Given that both FSA and PDA simulations are atmosphere-only runs, a special
effort has been taken to provide reliable SSTs in order to fully exploit the
high resolution.</p>
      <p>For PDA, SSTs have been obtained from the daily SST and SIC HadISST2.1.1, a pentad-based dataset with a resolution of <inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">0.25</mml:mn><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">0.25</mml:mn><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> for SSTs <xref ref-type="bibr" rid="bib1.bibx42" id="paren.48"/> and <inline-formula><mml:math id="M63" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">1</mml:mn><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">1</mml:mn><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> for SIC <xref ref-type="bibr" rid="bib1.bibx85" id="paren.49"/>. These are
bilinearly interpolated onto the required reduced Gaussian grid for each
resolution: climatologies for SST and SIC for the 1979–2008 period can be
seen in the upper panels of Fig. <xref ref-type="fig" rid="Ch1.F1"/>.</p>
      <p>A number of inconsistencies are found between the land–sea mask of IFS and of
HadISST2.1.1; these are due to slightly different coastlines and a different
representation of the lakes. For the different coastlines, linear
extrapolation from HadISST2.1.1 has been performed. For the interior (i.e.
lakes), a methodology similar to the one used in ERA20CM dataset
<xref ref-type="bibr" rid="bib1.bibx35" id="paren.50"/> has been adopted: 1-month lagged 2 m
temperatures from the ERA-Interim monthly climatology of 1979–2008 are used
as SST. Where the temperature is below zero, SIC is set to one, otherwise it
is left at zero. This is interpolated in time on a daily basis and in space
on the needed grid to create a smoothed seasonal cycle for lakes.</p>
</sec>
<sec id="Ch1.S3.SS5">
  <title>Future scenario SST and SIC</title>
      <p>The creation of SST and SIC for the FSA experiment is more complex. We would
like to consider the mean change and trend for the future climate
(2038–2068) predicted by the state-of-the-art global coupled models (i.e.
the CMIP5 models). However, the oceanic component of these models has
generally a low horizontal (of the order of 1<inline-formula><mml:math id="M64" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>) and temporal (usually
monthly) resolution, in which the oceanic circulation is not perfectly
resolved. In order to improve our boundary conditions, we decided to take
advantage of the high temporal and spatial resolution provided by the
HadISST2.1.1. As a consequence, the SST for FSA experiments have been
obtained as a combination of HadISST2.1.1 variability and the CMIP5 EC-Earth
simulations ensemble mean trend.</p>
      <p>First, the 1979–2008 HadISST2.1.1 SST has been detrended point by point to
provide a set of anomalies with realistic variability. Second, the monthly
seasonal cycle of the difference between the CMIP5 EC-Earth RCP8.5 ensemble
mean over 2038–2068 (10 members) and the CMIP5 EC-Earth historical ensemble
mean over 1979–2008 (10 members) has been computed. This provides for each
grid point the average expected SST increase from the present-day to the
future period according to a GCM (Global Circulation Model),
as a function of calendar month. To account
for changes in SST during the FSA period, for each grid point the average
trend in SST from the CMIP5 EC-Earth RCP8.5 integrations for 2038–2068 was
also extracted. All CMIP5 EC-Earth data were bilinearly interpolated in space
on the HadISST2.1.1 grid and linearly in time to daily frequency.</p>
      <p>Finally, a new Step1HadISST dataset has been created combining the detrended
HadISST2.1.1 (expressing the high-resolution daily variability), the average
daily change of CMIP5 EC-Earth (from RCP8.5 and historical, expressing the
expected average temperature increase) and the linear trend of the CMIP5
EC-Earth RCP 8.5 (expressing the expected future trend in SST). The
methodology used here, which shares the main characteristics with the method
developed by <xref ref-type="bibr" rid="bib1.bibx59" id="text.51"/>, is sketched in
Fig. <xref ref-type="fig" rid="Ch1.F2"/>.</p>
      <p>However, the Step1HadISST reconstruction misses an important element; there
is no information on the sea ice cover in the future. To account for this, we
took data from the CMIP5 EC-Earth simulations as a reference for SIC. CMIP5
EC-Earth simulations show a considerable cold bias in SST with respect to
HadISST2.1.1, but they show good sea ice coverage, especially for the
Northern Hemisphere (see average Northern Hemisphere and Southern Hemisphere SIC in
Fig. <xref ref-type="fig" rid="Ch1.F3"/>).</p>
      <p>Considering that an ensemble mean would be unrealistic, especially for a
field with a large spatial variance as sea ice, we select a single ensemble
member representative of the ensemble. Member “r8i1p1” has been chosen to
characterise the ensemble, since its climatology shows the smallest SIC
root mean square error (RMSE) when compared to the ensemble mean climatology in
the time window 2038–2068. Clearly, using RMSE is only one of the possible
metric to perform such selection; our main goal is to pick an ensemble member
that is not an outlier when compared to the other EC-Earth CMIP5 ensemble
members.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><caption><p>Scheme representing the methodology adopted to create the
FutureHadISST 2.1.1. The new dataset is a combination of detrended daily
variability from HadISST 2.1.1, CMIP5 EC-Earth mean change and CMIP5 EC-Earth
RCP8.5 trend.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/1383/2017/gmd-10-1383-2017-f02.pdf"/>

        </fig>

      <p>As a last step, we must evaluate SST for points where SIC coverage has
disappeared in the future scenario. The lack of information about historical
SST under sea ice results in undefined SST at these points using the
methodology outlined above. We define these as “bare point”. For bare
points, we want to make use of the model variability, but we do not want to
have inconsistent SST at the boundaries (i.e. where bare points border the
Step1Hadisst dataset).</p>
      <p>Initially, we perform a linear extrapolation for bare points for Step1HadISST
SSTs – which gives us a measure of the average SSTs at the bare points.
However, these extrapolated values are missing a realistic spatial
variability. We then mask the bare points also in the SST field of the CMIP5
EC-Earth ensemble member “r8i1p1”, and we subsequently linearly extrapolate
new values. We then subtract from the original field of CMIP5 EC-Earth
ensemble member “r8i1p1” these new extrapolated values, in order to obtain
an anomaly field, which includes the spatial and temporal variability of the
SST field over the bare points given by CMIP5 EC-Earth “r8i1p1”. This final
field is then added to the linearly extrapolated Step1HadISST SST.</p>
      <p>Hence, for each day, the SSTs for bare points are given by the EC-Earth CMIP5
RCP8.5 ensemble member “r8i1p1” SST minus extrapolated EC-Earth CMIP5
RCP8.5 SSTs plus extrapolated Step1HadISST. The methodology to obtain this
specific SST reconstruction is illustrated in Fig. <xref ref-type="fig" rid="Ch1.F4"/>.</p>
      <p>This provides a pattern of SSTs physically consistent with SICs; indeed, it
avoids unrealistic values of SSTs in the proximity of the polar cap during
winter and – using the CMIP5 EC-Earth data – it provides a reasonable
distribution of SSTs in summer, where in the future scenario the sea ice
coverage in the Northern Hemisphere often disappears. Moreover, there is no discontinuity at
the border with Step1HadISST. The new dataset is defined as
FutureHadISST2.1.1.<?xmltex \hack{\newpage}?></p>
      <p>The same methodology used for the PDA simulations has been adopted also for
FSA runs in order to solve the issues of the lakes and the different land
sea mask; however, in this case we must account for the estimated temperature
change over land. We consider the difference between the 1-month lagged
2 m surface temperature from CMIP5 EC-Earth RCP8.5 and the 1-month lagged
2 m surface temperature from CMIP5 EC-Earth historical ensemble (averaged
over eight members). We then add this to the 1-month lagged 2 m surface
temperature ERA-Interim monthly climatology of 1979–2008. This, analogous to
what was done for SSTs, accounts for climate change.</p>
      <p>The SST and SIC changes between FutureHadISST2.1.1 and HadISST2.1.1 are
reported in Fig. <xref ref-type="fig" rid="Ch1.F1"/>; as expected larger warming and sea ice
retreat is seen in the Northern Hemisphere high latitudes.
Figure <xref ref-type="fig" rid="Ch1.F3"/> reports the time series and trends for SST
(between 45<inline-formula><mml:math id="M65" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S and 45<inline-formula><mml:math id="M66" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N) and SIC (for both Northern and
Southern hemispheres) for both FutureHadISST2.1.1 and HadISST2.1.1.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><caption><p><bold>(a)</bold> Time series for 45<inline-formula><mml:math id="M67" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S–45<inline-formula><mml:math id="M68" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N yearly
averaged SST for present-day HadISST 2.1.1 (red), FutureHadISST 2.1.1
(violet) and CMIP5 EC-Earth ensemble mean (light
blue). <bold>(b)</bold> Time series for Northern Hemisphere (filled circles) and
Southern Hemisphere (empty circles) yearly averaged sea ice area for HadISST
2.1.1 (dark blue), FutureHadISST 2.1.1 (green), CMIP5 EC-Earth ensemble
member “r8i1p1” (light blue) and the CMIP5 EC-Earth ensemble mean (faint
blue).</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/1383/2017/gmd-10-1383-2017-f03.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><caption><p>Scheme representing the methodology adopted to fill the “bare
points”, i.e. the points where sea ice has retreated in the CMIP5 EC-Earth
RCP8.5 simulation. Each line represent a SST profile from the Equator to the
pole.</p></caption>
          <?xmltex \igopts{width=199.169291pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/1383/2017/gmd-10-1383-2017-f04.pdf"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S4">
  <title>Technical configuration</title>
<sec id="Ch1.S4.SS1">
  <title>High-performance computing details</title>
      <p>Simulations have been run on the 6.8 PFLOP SuperMUC IBM Petascale System
at LRZ. The initial set-up and configurations have been performed on the
Supermuc-I platform, based on Sandy Bridge-EP Xeon E5-2680 8C processors. For
processor decomposition the Message Passage Interface
(MPI) parallelism
paradigm has been used. EC-Earth allows also for OpenMP/Shared memory
parallelisation, which has been tested without showing any significant
computational benefit.</p>
      <p>An accurate scaling of the performance was performed during the first months
of the simulations. However, a conservative choice has been undertaken, after
considering that the wall time needed to run the simulations was not the main
concern for the project success. The number of cores assigned to each
experiments have been selected following the resolution of the model
considered. Although stochastic physics experiments showed about 5–10 %
decrease in performance (according to different resolutions), the same number
of cores has been retained.</p>
      <p>In summer 2015, a new Supermuc-II platform based on Haswell Xeon
E5-2697 v3 processors was made available by the LRZ. The new HPC granted a
reduction of about 5 % of the total core hours used, without affecting
the wall time. About 75 % of the simulations have been run using the
Haswell nodes. Details on the processor decomposition, computational costs
and data outputs are reported in Table <xref ref-type="table" rid="Ch1.T3"/>.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><caption><p>Resolution-dependent technical details for EC-Earth in the Climate
SPHINX experiments. T255C is the coupled configuration used for PFC
simulations. Wall time has been measured on the Supermuc-II Haswell platform,
and it is evaluated for deterministic simulations; stochastic simulations
wall time is about the 5 % higher. </p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Truncation</oasis:entry>  
         <oasis:entry colname="col2">No. of cores</oasis:entry>  
         <oasis:entry colname="col3">Wall time (per year)</oasis:entry>  
         <oasis:entry colname="col4">Leg length</oasis:entry>  
         <oasis:entry colname="col5">Output data (per year)</oasis:entry>  
         <oasis:entry colname="col6">Post-proc data (per year)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">T159</oasis:entry>  
         <oasis:entry colname="col2">224</oasis:entry>  
         <oasis:entry colname="col3">52 min</oasis:entry>  
         <oasis:entry colname="col4">1 year</oasis:entry>  
         <oasis:entry colname="col5">26 GB</oasis:entry>  
         <oasis:entry colname="col6">9.7 GB</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T255</oasis:entry>  
         <oasis:entry colname="col2">588</oasis:entry>  
         <oasis:entry colname="col3">1 h 12 min</oasis:entry>  
         <oasis:entry colname="col4">1 year</oasis:entry>  
         <oasis:entry colname="col5">64 GB</oasis:entry>  
         <oasis:entry colname="col6">24 GB</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T511</oasis:entry>  
         <oasis:entry colname="col2">840</oasis:entry>  
         <oasis:entry colname="col3">6 h 10 min</oasis:entry>  
         <oasis:entry colname="col4">6 months</oasis:entry>  
         <oasis:entry colname="col5">249 GB</oasis:entry>  
         <oasis:entry colname="col6">35 GB</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T799</oasis:entry>  
         <oasis:entry colname="col2">1120</oasis:entry>  
         <oasis:entry colname="col3">14 h</oasis:entry>  
         <oasis:entry colname="col4">2 months</oasis:entry>  
         <oasis:entry colname="col5">605 GB</oasis:entry>  
         <oasis:entry colname="col6">57 GB</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">T1279</oasis:entry>  
         <oasis:entry colname="col2">1540</oasis:entry>  
         <oasis:entry colname="col3">30 h</oasis:entry>  
         <oasis:entry colname="col4">1 month</oasis:entry>  
         <oasis:entry colname="col5">1.6 TB</oasis:entry>  
         <oasis:entry colname="col6">111 GB</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">T255C</oasis:entry>  
         <oasis:entry colname="col2">588</oasis:entry>  
         <oasis:entry colname="col3">1 h 35 min</oasis:entry>  
         <oasis:entry colname="col4">1 year</oasis:entry>  
         <oasis:entry colname="col5">38 GB</oasis:entry>  
         <oasis:entry colname="col6">30 GB</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S4.SS2">
  <title>Data output and post-processing</title>
      <p>In Climate SPHINX, IFS has been set up to provide output
in GRIB format every
3 h; however, the four T1279 simulations alone sum up to about 200 TB of
raw data output. Summing together the restarts files and the output of all
experiments the total amount of space occupied at the peak of the project
(February 2016) reached about 1 PB. In order to reduce the size of the
output and to increase the data accessibility to a larger audience, automatic
post-processing routines have been implemented. At the end of each simulation
leg, a script aimed at post-processing is launched; the script handles both
the spectral and reduced Gaussian data from IFS and extracts and converts the
requested variables from the default ECMWF format to a user-friendly,
CMOR-like format on regular Gaussian grid. With this automatic procedure,
more than 140 TB of post-processed data has been produced. A significant
reduction of the data volume was obtained making use of the NetCDF-4 Zip
format.</p>
      <p>Monthly (MON), daily (DAY) and 6 h (6HRS) data for different subsets of
variables have been produced. More than 50 fields have been stored at monthly
frequency. In order to further reduce the space requirements, daily and 6 h
three-dimensional (3-D) fields have been degraded to the spectral resolution of T255. Additional
data at 3 h frequency have been stored for the Euro-Cordex domain
(3HRS-CDX)
and for a sub-domain including India, Tibet and Pakistan
(3HRS-ITP). Total
precipitation has also been saved over the global grid at full resolution
with 3 h frequency (3HRS). Finally, synoptic monthly means have been stored
for the main radiative variables (SMON). A few fields that are non-linear
functions of the output (e.g. specific humidity) have been computed from the
original 3 h output and then averaged at the required frequency in order to
record them accurately. In addition to the atmospheric data, about 10 TB of
oceanic output has been stored for PFC simulations. Data at daily and pentad
frequency have been retained.</p>
      <p>All the data, including raw output, post-processed data and restart files,
have been archived on the tape archives of the Tivoli Storage Management
Infrastructure of the LRZ.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><caption><p>Left: <bold>(a)</bold> climatological ensemble mean precipitation for
the PDA experiments (1979–2008) for T255 with stochastic physics.
<bold>(d)</bold> T799 stochastic minus T255 stochastic precipitation. Centre:
T255 <bold>(b)</bold> and T799 <bold>(e)</bold> precipitation bias with respect to
GPCP. Right: stochastic minus deterministic climatological precipitation for
T255 <bold>(c)</bold> and T799 <bold>(f)</bold>.</p></caption>
          <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/1383/2017/gmd-10-1383-2017-f05.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><caption><p>Same as Fig. <xref ref-type="fig" rid="Ch1.F5"/> but for zonal wind at
200 hPa. Here bias is evaluated against ERA-Interim reanalysis.</p></caption>
          <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/1383/2017/gmd-10-1383-2017-f06.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S5">
  <title>Results overview</title>
      <p>In this section we present a brief overview of the preliminary findings of
the Climate SPHINX project. Considering that the number of diverse climate
aspects that could be analysed in such a large dataset is large, we decided
to present hereafter only a few selected features of the mean climate and its
variability. For all the results presented – if not specified
differently – the complete set of ensemble members available for the
present-day climate (i.e. PDA experiments) has been used.</p>
<sec id="Ch1.S5.SS1">
  <title>Mean climate</title>
      <p>Although a detailed analysis of the mean climate in all the simulations
performed would be excessively long to be included in the present work, we
introduce a couple of figures showing the sensitivity to resolution and
stochastic physics parameterisation of the climatology of precipitation
(Fig. <xref ref-type="fig" rid="Ch1.F5"/>) and 200 hPa zonal wind
(Fig. <xref ref-type="fig" rid="Ch1.F6"/>). We compare the ensemble mean average fields of a
low-resolution version (T255) with a high-resolution one (T799), in both its
deterministic and stochastic configurations. Data have been interpolated on
a common <inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> grid.</p>
      <p>The precipitation model bias – shown in Fig. <xref ref-type="fig" rid="Ch1.F5"/>,
with respect to Global Precipitation Climatology Project (GPCP) dataset
<xref ref-type="bibr" rid="bib1.bibx36" id="paren.52"/> – is especially strong in Indian Monsoon
region, with an excess of precipitation from the Indian Ocean to the western
Pacific. More generally, EC-Earth tends to underestimate the precipitation
over the continents and overestimate it over the oceans. When the comparison
is carried out between stochastic and deterministic configurations, it is
possible to see that SPPT and SKEB neither improve nor deteriorate the
climatology at both T255 and T799 resolutions. Conversely, a slightly more
evident change is seen comparing the high and low resolutions; here T799
shows a widespread increase of the extratropical precipitation. But again,
when it is evaluated against the model bias such changes are minor.</p>
      <p>Impacts on the upper-tropospheric zonal wind field are clearer and they are
shown in Fig. <xref ref-type="fig" rid="Ch1.F6"/>. The T255 version – compared against ECMWF
ERA-Interim reanalysis <xref ref-type="bibr" rid="bib1.bibx21" id="paren.53"/> – shows too strong jets in
both the hemispheres. The subtropical jet over Asia and the Pacific is also
poleward displaced, while equatorial easterly jets are too weak. Again,
stochastic physics bring minor changes, with a slightly stronger Atlantic
jet, more penetrating over Europe. Conversely, the higher resolution leads to
an overall weakening of the upper-tropospheric winds; this is especially true
over North America and the Tibetan Plateau, suggesting that this change may
be induced by the stronger surface drag caused by the more resolved (and thus
higher) mean orography.</p>
      <p>More generally, in these and other climatological fields (not shown) the
impact of the two stochastic parameterisations and resolution appears to be
small if compared to the model bias. Indeed, larger benefits from increasing
resolution and stochastic physics are expected more in terms of variability
rather than in terms of mean state
<xref ref-type="bibr" rid="bib1.bibx19 bib1.bibx90 bib1.bibx13" id="paren.54"><named-content content-type="pre">e.g.</named-content></xref>.</p>
      <p>Therefore, in the following sections we will focus on a few selected features
of climate variability. We will investigate the improvements and/or
deteriorations following resolution increase and including the SPPT and SKEB
stochastic parameterisations of three different phenomena: the distribution
of the intensity of tropical rainfall, the tropical variability related to
the Madden–Julian Oscillation and the mid-latitude variability associated
with atmospheric blocking.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><caption><p>Panels <bold>(a)</bold> and <bold>(c)</bold> show the frequency of occurrence of
daily-mean rain rates averaged over <inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> grid
boxes between 10<inline-formula><mml:math id="M71" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S and 10<inline-formula><mml:math id="M72" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N in different datasets in
5 mm day<inline-formula><mml:math id="M73" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> intervals, with rates below 0.1 mm day<inline-formula><mml:math id="M74" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> omitted.
Panel
<bold>(a)</bold> shows data for GPCP, TRMM and the deterministic Climate SPHINX
PDA simulations and <bold>(c)</bold>  shows the same for the PDA simulations with
stochastic physics. Note that the vertical axis is logarithmic. Panels
<bold>(b)</bold> and <bold>(d)</bold> show the rain rates in each simulation and
TRMM as a fraction of that in GPCP for the deterministic and stochastic runs
respectively. Horizontal dashed lines indicate a fraction of 1, which would
correspond to perfect agreement with GPCP. Vertical bars indicate the
95 % confidence intervals. The frequency in <bold>(a)</bold>
and <bold>(c)</bold> corresponds to that for an individual grid box, if all grid
boxes were statistically equivalent. Data are shown for 1998–2008, the time
period common to all datasets, for all ensemble members.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/1383/2017/gmd-10-1383-2017-f07.png"/>

        </fig>

</sec>
<sec id="Ch1.S5.SS2">
  <title>Tropical rainfall variability</title>
      <p>Climate models generally have too little tropical variability on timescales
of several days <xref ref-type="bibr" rid="bib1.bibx38" id="paren.55"><named-content content-type="pre">e.g.</named-content></xref>. One aspect of the
variability of particular interest is the occurrence of heavy-precipitation
events, which can result in flooding, affect disease incidence and reduce
crop yields <xref ref-type="bibr" rid="bib1.bibx39" id="paren.56"/>. Changes in the frequency of these events
can also affect trends in total precipitation due to non-linearity in land-surface processes <xref ref-type="bibr" rid="bib1.bibx70" id="paren.57"/>.</p>
      <p>Figure <xref ref-type="fig" rid="Ch1.F7"/>a shows the frequency distribution of daily-mean
precipitation rates averaged over <inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> grid
boxes between 10<inline-formula><mml:math id="M76" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S and 10<inline-formula><mml:math id="M77" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N over the period 1998–2008 in
data from GPCP, data from the Tropical Rainfall Measuring Mission (TRMM) 3B42
version 7 product <xref ref-type="bibr" rid="bib1.bibx37" id="paren.58"/> and one ensemble member for
each PDA run. Figure <xref ref-type="fig" rid="Ch1.F7"/>b shows the ratio of the frequency in
each rain rate interval as a fraction of that in GPCP for each resolution.</p>
      <p>Vertical bars in Fig. <xref ref-type="fig" rid="Ch1.F7"/> show the 95 % confidence
intervals of the frequencies associated with sampling uncertainty. These were
calculated using a bootstrap method. For each dataset, a surrogate dataset
was created by randomly sampling individual years of data with replacement.
The frequency distribution of the surrogates and their frequency ratios with
respect to the GPCP surrogate were calculated. This was repeated 1000 times
to produce the distribution of the calculations associated with sampling
uncertainty, from which the confidence intervals were derived.</p>
      <p>At all resolutions, rain rates below 15 <inline-formula><mml:math id="M78" display="inline"><mml:mrow><mml:mi mathvariant="normal">mm</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">day</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> occur too often
in the model data, by about 50 %, and rain rates between
20 and 60 <inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:mi mathvariant="normal">mm</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">day</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> occur too infrequently compared to both
observational datasets. At rain rates near 30 <inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:mi mathvariant="normal">mm</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">day</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, the
simulated frequencies are between about 35 and 50 % of the frequency in
GPCP. At higher rain rates, the frequency differences between TRMM and GPCP
become comparable in size to or larger than the differences between the
modelled frequencies and the observational datasets. We do not know of a
reason to strongly prefer one dataset over the other; therefore, we consider the
model bias to be uncertain at these rain rates. The frequency of rain rates
above 30 <inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:mi mathvariant="normal">mm</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">day</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> in the T159 and T255 models are below about
40 % of that in GPCP. At T511, T799 and T1279 the relative frequency
difference compared to GPCP and TRMM decreases as the rain rate increases,
and becomes comparable to that in GPCP in the 60–65 <inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:mi mathvariant="normal">mm</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">day</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>
interval, though still much smaller than that in TRMM. Therefore, increasing
the model resolution from T159 to T511 improves the simulated frequency of
heavy-rainfall events compared to observational datasets, with the further
improvements caused by increasing the resolution to T799 or T1279 being
considerably smaller.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><caption><p>MJO frequency of occurrence vs. mean amplitude for the PDA
experiments in the four different phases given the MJO amplitude to be
<inline-formula><mml:math id="M83" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 1. The four phases are classified as Indian Ocean <bold>(a)</bold>, Maritime
Continent <bold>(b)</bold>, western Pacific <bold>(c)</bold> and western
hemisphere <bold>(d)</bold>, and their geographical location is shown by the
boxes at the bottom of each panel with anomalous positive/negative
precipitation patterns (green/yellow regions). Colours indicate the ensemble
mean of the different resolutions as shown in the legend, where the circles
are the deterministic runs and the diamonds the stochastic runs. ERA-Interim
is reported in grey. Statistics are shown for the period 1980–2001. Error
bars show the uncertainty range by providing the same statistic for periods
half the length of the analysis.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/1383/2017/gmd-10-1383-2017-f08.png"/>

        </fig>

      <p>Figure <xref ref-type="fig" rid="Ch1.F7"/>c, d show the same data for the stochastic PDA runs.
Stochastic physics has a similar effect at all resolutions. Frequencies of
rain rates between 5 and 15 mm day<inline-formula><mml:math id="M84" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> are reduced by about 10 %
compared to those in the deterministic models, reducing the model bias.
Frequencies above about <inline-formula><mml:math id="M85" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 20 <inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:mi mathvariant="normal">mm</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">day</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> are substantially
increased, by a larger factor at larger rain rates, up to a factor of
<inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/></mml:mrow></mml:math></inline-formula>2.5 at rain rates around 60 <inline-formula><mml:math id="M88" display="inline"><mml:mrow><mml:mi mathvariant="normal">mm</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">day</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>. This reduces the
difference from GPCP and TRMM up to rain rates of 45 <inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:mi mathvariant="normal">mm</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">day</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> at
all resolutions.</p>
      <p>The higher-resolution stochastic models have rain rate frequencies between
those of GPCP and TRMM at rates above 45 <inline-formula><mml:math id="M90" display="inline"><mml:mrow><mml:mi mathvariant="normal">mm</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">day</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, so they seem
consistent with the observations given the observational uncertainty. The
T255 stochastic model has rain rate frequencies closer to those in GPCP than
any of the deterministic models in all but two of the 5 <inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:mi mathvariant="normal">mm</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">day</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>
rain rate intervals shown. One hypothesis to explain this effect is that the
stochastic perturbations sometimes increase the moistening tendency of the
air, so that it occurs more often that there is a high amount of water vapour
in the air and heavier rain events can occur, and there is a compensating
decrease in the frequency of moderate rain events.</p>
      <p>Therefore, stochastic physics brings this aspect of the simulations into
better agreement with observations, suggesting that including a
representation of unresolved variability and model error is important for
simulating the statistics of extreme tropical precipitation events.</p>
</sec>
<sec id="Ch1.S5.SS3">
  <title>The Madden–Julian Oscillation variability</title>
      <p>The MJO is the dominant mode of variability in
the tropical region on sub-seasonal timescales
<xref ref-type="bibr" rid="bib1.bibx54" id="paren.59"/>. It is characterised by a strong interaction
between tropical convection and the large-scale environment, manifest as a
coherent eastward propagating pattern of precipitation followed by subsequent
rainfall suppression
<xref ref-type="bibr" rid="bib1.bibx44 bib1.bibx96 bib1.bibx46 bib1.bibx67" id="paren.60"/>.
It is a challenge for the current generation of global climate and weather
models to represent the dynamics and thermodynamics of the MJO realistically
<xref ref-type="bibr" rid="bib1.bibx79 bib1.bibx50 bib1.bibx45 bib1.bibx80 bib1.bibx48" id="paren.61"/>.</p>
      <p>Here we use the <xref ref-type="bibr" rid="bib1.bibx92" id="text.62"/> technique to identify the
dominant modes of variability in zonal winds and outgoing longwave radiation
(OLR) in these model runs. Combined Empirical Orthogonal Functions
(CEOFs) of
intraseasonal OLR, U850 (zonal winds at 850 hPa) and U200 (zonal winds at
200 hPa) are computed for each of the runs. The first two leading modes
(Realtime Multivariate MJOs: RMM1 and RMM2) correspond to MJO signatures in the tropical wind field and
OLR. The amplitude <inline-formula><mml:math id="M92" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> of the MJO is defined as
            <disp-formula id="Ch1.E3" content-type="numbered"><mml:math id="M93" display="block"><mml:mrow><mml:mi>A</mml:mi><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:mo>(</mml:mo><mml:mtext>RMM1</mml:mtext><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mtext>RMM2</mml:mtext><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msqrt></mml:mrow></mml:math></disp-formula>
          and the phase <inline-formula><mml:math id="M94" display="inline"><mml:mi mathvariant="normal">Φ</mml:mi></mml:math></inline-formula> of the MJO is defined as
            <disp-formula id="Ch1.E4" content-type="numbered"><mml:math id="M95" display="block"><mml:mrow><mml:mi mathvariant="normal">Φ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mi>tan⁡</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mtext>RMM2</mml:mtext><mml:mtext>RMM1</mml:mtext></mml:mfrac></mml:mstyle></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
      <p>MJO occurrence is defined when the MJO <inline-formula><mml:math id="M96" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> is <inline-formula><mml:math id="M97" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 1. Conventionally, eight
phases of the MJO are defined <xref ref-type="bibr" rid="bib1.bibx30" id="paren.63"/>. We reduce
the eight phases to four phases respectively corresponding to the MJO being
active in the Indian Ocean, Maritime Continent, Western Pacific and Western
Hemisphere. We note that the Wheeler Hendon RMM
index has been shown to be deficient in detecting MJO events when large-scale
circulation signals of the MJO are missing <xref ref-type="bibr" rid="bib1.bibx81" id="paren.64"/>.
Figure <xref ref-type="fig" rid="Ch1.F8"/> shows the frequency of occurrence vs. the mean amplitude
of the MJO in the four different regions around the tropics for all the
different runs (colours) and for ECMWF ERA-Interim Reanalysis
<xref ref-type="bibr" rid="bib1.bibx21" id="paren.65"><named-content content-type="pre">grey;</named-content></xref> over the 1980–2001 period.</p>
      <p>Overall the frequency of occurrence of the MJO in the different regions in
the tropics for the different model resolutions is underestimated with
respect to that of ERA-Interim. The MJO amplitude in the model simulations is
lower than reanalysis over the Indian Ocean and the Western Hemisphere.</p>
      <p>More importantly, increasing horizontal resolution does not seem to improve
the representation of the phenomenon significantly. This may be explained
considering that the simulation of the MJO in GCMs is influenced primarily by
the representation of mesoscale dynamics and of convection. The simulation of
mesoscale dynamics can be helped by increasing the resolution, while
improvements in convection are driven by changes in physical
parameterisations of the model. Yet, the coupling between the mesoscale
dynamics and the convection is key for convectively coupled waves in the
tropics <xref ref-type="bibr" rid="bib1.bibx67" id="paren.66"/>. Therefore, increasing resolution
alone may not be sufficient to improve the simulation of the MJO.</p>
      <p>Conversely, the stochastic physics parameterisation improves the MJO
frequency in all regions at all resolutions but T1279. It must be noted that
this latter run was done with only one ensemble member compared to the other
runs with three or more ensemble members over the same period; therefore, a
sampling error due to natural variability should be considered. Above all,
the best results are obtained for the T255 with stochastic physics,
suggesting that the tuning of the mean state of the model might play a
relevant role for a better MJO simulation.</p>
      <p>Additionally, the stochastic physics climate runs show an improvement in the
representation of the MJO propagation over the Maritime Continent (not
shown). The lack of propagation of the MJO over the Maritime Continent into
the western Pacific region is a known problem in GCMs
<xref ref-type="bibr" rid="bib1.bibx96" id="paren.67"/>. An improvement in the MJO propagation past the
Maritime Continent due to SPPT has also been seen in the ECMWF seasonal
forecasting system 4 <xref ref-type="bibr" rid="bib1.bibx91" id="paren.68"/>.
<xref ref-type="bibr" rid="bib1.bibx82" id="text.69"/> also showed an improved MJO propagation and
improved probabilistic prediction skill for the MJO in the ECMWF system 4
when SPPT is active as compared to runs without stochastic physics. Such
improved propagation in stochastic runs indicates either that there is an
impact of the stochastic physics on the mean state in the region or that the
variability in the region helps maintain the intraseasonal signal. The
reasons for the change in MJO representation due to stochastic physics will
be explored further in a more detailed future study by the authors.</p>
</sec>
<sec id="Ch1.S5.SS4">
  <title>Mid-latitude atmospheric blocking variability</title>
      <p>One of the most important challenges for the current generation of climate
models is the simulation of atmospheric blocking
<xref ref-type="bibr" rid="bib1.bibx1 bib1.bibx56 bib1.bibx28 bib1.bibx16" id="paren.70"/>.
Blocking is a recurrent weather pattern typically occurring in the Northern Hemisphere at the exit of
the Atlantic and Pacific jet stream, more frequently during the winter season
but observed throughout the year <xref ref-type="bibr" rid="bib1.bibx69 bib1.bibx84" id="paren.71"/>. It is
characterised by a high-pressure, long-lasting low-vorticity anomaly that
“blocks” the mid-latitude westerly flow, diverting synoptic disturbances
poleward or equatorward
<xref ref-type="bibr" rid="bib1.bibx86 bib1.bibx17" id="paren.72"/>. A blocking event can
last several days or even weeks, and it may be associated with cold spells in
winter and heat waves in summer
<xref ref-type="bibr" rid="bib1.bibx78 bib1.bibx26" id="paren.73"/>.</p>
      <p>Blocking here is diagnosed using the simple index introduced by
<xref ref-type="bibr" rid="bib1.bibx15" id="text.74"/>, an extension of the better known
<xref ref-type="bibr" rid="bib1.bibx84" id="text.75"/> index. This 1-D blocking index detects the reversal of the
zonal flow measuring the geopotential height gradient at 500 hPa at
60<inline-formula><mml:math id="M98" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, providing a binary blocking time series for each longitude.
Although there is some evidence
<xref ref-type="bibr" rid="bib1.bibx8 bib1.bibx19" id="paren.76"><named-content content-type="pre">e.g.</named-content></xref> that stochastic
physics may improve the blocking simulation, with the current diagnostic no
statistically significant difference emerges – even at low resolution –
when comparing deterministic and stochastic simulations. Therefore, the two
simulations are combined together to provide an unique ensemble.<?xmltex \hack{\newpage}?></p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><caption><p><bold>(a)</bold> Ensemble mean blocking frequencies following
<xref ref-type="bibr" rid="bib1.bibx15" id="text.77"/> for the different PDA experiments. Members of
deterministic and stochastic experiments have been combined together for each
resolution. ERA-Interim for the 1979–2008 period is shown as comparison in
black. <bold>(b)</bold> December–January–February (DJF) climatological mean for geopotential height at
500 hPa for the ensemble mean of PDA experiments. Only 5200, 5300, 5400 and
5500 m isopleths are reported.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://gmd.copernicus.org/articles/10/1383/2017/gmd-10-1383-2017-f09.png"/>

        </fig>

      <p>The upper panel of Fig. <xref ref-type="fig" rid="Ch1.F9"/> shows the blocking frequency for
the ERA-Interim Reanalysis (black) and the ensemble mean of the different
horizontal resolutions (colours) of PDA experiments over the December–January–February (DJF) period. The
common negative bias over the Atlantic and Pacific basins is clearly evident.
Increasing the horizontal resolution leads to benefits over both the basins,
with marked improvements especially for the Atlantic; here, T799 and T1279
runs show values comparable to the reanalysis. The largest improvement is,
however, seen upgrading from T255 to T511, where the bias – measured as the
relative difference between the blocking frequency averaged between
10<inline-formula><mml:math id="M99" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W and 30<inline-formula><mml:math id="M100" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E – is reduced from the 18 to 3 %.</p>
      <p>Those clear improvements in blocking frequency are interestingly reflected by
a change in the mean state. A simple way to represent the flow variability is
to highlight a few isopleths of geopotential height, as done in the lower
panel of Fig. <xref ref-type="fig" rid="Ch1.F9"/>. Indeed, the higher-resolution models show a
strengthened pattern of the dominant Northern Hemisphere planetary waves,
with marked ridges over the Rockies and Europe. Especially, the former over
the Rockies <xref ref-type="bibr" rid="bib1.bibx10" id="paren.78"/> suggests an important role of
orography resolution in the representation of the eddy-driven jet stream and,
indirectly, of Euro-Atlantic blocking frequencies.</p>
      <p>Indeed, the reduction of the bias following resolution increase for winter
Atlantic blocking (and not for Pacific blocking) seems to be a common feature
of several GCMs <xref ref-type="bibr" rid="bib1.bibx16 bib1.bibx73" id="paren.79"/>.
Such improvements have been associated with both better resolved transient
eddy activity – which should sustain the blocking persistence
<xref ref-type="bibr" rid="bib1.bibx74 bib1.bibx6" id="paren.80"/> – and with higher orography
variance – which affects the mean state through planetary waves shaping
<xref ref-type="bibr" rid="bib1.bibx40 bib1.bibx6" id="paren.81"/>. Conversely, Pacific
blocking has been shown to be phenomenologically different
<xref ref-type="bibr" rid="bib1.bibx65 bib1.bibx17" id="paren.82"/> and to be strongly affected by
tropical dynamics <xref ref-type="bibr" rid="bib1.bibx68" id="paren.83"><named-content content-type="pre">e.g.</named-content></xref>; therefore, it is
not surprising that the latter would be less affected by horizontal
resolution changes.</p>
      <p>A more detailed analysis of blocking and mid-latitude variability will be
carried out by the authors in future studies.</p>
</sec>
</sec>
<sec id="Ch1.S6" sec-type="conclusions">
  <title>Conclusions</title>
      <p>In the present work we have described the scientific configuration and
technical set-up/tuning of the EC-Earth Earth system model used for the
Climate SPHINX project, which defines the SPHINX v1.0 protocol. More than 120
climate simulations have been produced making use of more than 20 million
core hours and generating about 140 TB of post-processed data. Climate
SPHINX includes both present-day (PDA simulations, 1979–2008) and future
scenario (FSA simulations, 2038–2068) atmosphere-only simulations according
respectively to CMIP5 historical and RCP8.5 forcing. These have been run at
five different horizontal resolutions – spanning from 125 to 16 km –
with several ensemble members. Furthermore, a smaller set of transient
coupled simulations (PFC simulations, 1850–2100) at T255 ORCA1
(<inline-formula><mml:math id="M101" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 80 km for the atmosphere and about 1<inline-formula><mml:math id="M102" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> for the ocean) has
been run.</p>
      <p>Each deterministic experiment included in Climate SPHINX has a counterpart
where the sub-grid unresolved scales have been parameterised with two
different stochastic physics schemes (namely the SPPT and SKEB schemes). This
makes Climate SPHINX the first climate dataset that includes a large number
of ensemble members with a stochastic parameterisation at different
horizontal resolution; along with other high-resolution simulation campaigns
such as UPSCALE <xref ref-type="bibr" rid="bib1.bibx58" id="paren.84"/> or ATHENA
<xref ref-type="bibr" rid="bib1.bibx47" id="paren.85"/>, this demonstrates the ability of the climate
community to exploit the more recent HPC machines.</p>
      <p>Details on the tuning procedure (aimed at providing a correct radiation
budget in the standard configuration T255) have been presented. Moreover, a
comprehensive description of the methodology adopted for the creation of the
present-day and future scenario SST and SIC (starting from the HadISST 2.1.1
dataset) has been described. A novel method aimed at estimating SST, where
SICs
have disappeared in future climate simulations, has been introduced.</p>
      <p>More importantly, Climate SPHINX post-processed outputs are freely accessible
to the climate community. This has been possible thanks to an EUDAT pilot
project, which makes available a THREDDS server operational at CINECA from
which data can be easily downloaded.</p>
      <p>Preliminary results show the importance of both resolution and stochastic
perturbations on the representation of the climate variability, although
different phenomena show different sensitivities. Tropical rainfall
variability seems to benefit from both increased horizontal resolution and
stochastic parameterisation, whereas the Madden–Julian Oscillation shows
improvements only when the stochastic perturbations are added. In general –
in the tropics – applying stochastic schemes at low resolution leads to
interesting improvements; on the other hand, increasing resolution beyond
T511 does not seem to further improve the tropical variability.</p>
      <p>Conversely, in the mid-latitudes, where atmospheric blocking frequencies were
analysed, no statistical difference is found between stochastic and
deterministic runs. Previous works
<xref ref-type="bibr" rid="bib1.bibx8 bib1.bibx19" id="paren.86"/> suggested that blocking
regimes can benefit from stochastic schemes. We note that the simulations
presented here are at a higher resolution than <xref ref-type="bibr" rid="bib1.bibx8" id="text.87"/>
and have been analysed using a different metric to
<xref ref-type="bibr" rid="bib1.bibx19" id="text.88"/>. Nevertheless, we must observe that our
blocking diagnostic shows strong variability in the different ensemble
members, suggesting that a single realisation may be not enough to capture
the real sensitivity of this diagnostic to stochastic schemes. On the other
hand, we found that increased horizontal resolution seems extremely important
to decrease the blocking bias; in agreement with other recent works
<xref ref-type="bibr" rid="bib1.bibx16 bib1.bibx73" id="paren.89"/> this is true
especially over the Euro-Atlantic sector – where the T799 resolution
(<inline-formula><mml:math id="M103" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 25 km) reduces it to negligible values – but not evident over the
Pacific.</p>
      <p>To summarise, the best improvements are observed on upgrading from T255 to
T511, whereas minor improvements are observed using higher resolutions.
However, while this resolution increase reduces the bias for the most of the
phenomena here analysed, SPPT and SKEB schemes seem ineffective on some
aspects (e.g. atmospheric blocking) but effective as much as resolution –
and even more – on others (e.g. tropical precipitation variability); in the
case of the MJO variability, stochastic schemes applied to the T255 model
bring improvements larger than the ones associated with any resolution
refinement.</p>
      <p>However, we must remark that these results can be associated with the absence
of specific tuning for both deterministic higher-resolution and stochastic
configurations, which can affect the mean climate and consequently partially
deteriorate the climate variability. Indeed, such tuning does not involve
only the surface and TOA radiative fluxes but also some of the physical
parameterisations of the climate model. Some schemes, e.g. deep and shallow
convection parameterisations, may be satisfactory at coarse resolutions but
may perform poorly at finer ones.</p>
      <p>Given the similarities between the dynamical cores of climate models, since
they are all based on a controlled discretisation of the same governing
equations, we hope that the resolution sensitivity aspect of Climate SPHINX
will be useful to the whole climate modelling community. On the other hand,
several promising stochastic schemes exist, and the sensitivity of EC-Earth
to SPPT and SKEB described here cannot be easily extrapolated to these
alternative approaches. Nevertheless, considering that Climate SPHINX is the
first large experiment where stochastic schemes are used massively on the
climate time range, we hope that this work paves the way for other
climate-oriented simulations aimed at investigating the impact of different
stochastic schemes on climate variability.</p>
      <p>Furthermore, Climate SPHINX focuses attention on the controversial choice
between increasing resolution or increasing the size of ensembles – whilst
keeping the same computing time available
<xref ref-type="bibr" rid="bib1.bibx11" id="paren.90"><named-content content-type="pre">e.g.</named-content></xref>. Indeed, running 30 years of one member
at T1279 on the SuperMUC Petascale System costs about 1.4 million core hours;
with the same amount of time it would be possible to run 9–10 simulations at
T511. However, the benefits of the two pathways may be different, while a
single member with 16 km resolution can provide local information at a
topographic scale, which is useful, for instance, for hydrological models –
particularly in areas with complex topography; in contrast many ensemble
members at 40 km resolution can provide a correct assessment of the natural
variability, a key element for instance for mid-latitude climate
<xref ref-type="bibr" rid="bib1.bibx25 bib1.bibx41" id="paren.91"/>. However, we must keep in
mind that the computational constraints would become particularly relevant
for coupled simulations, in which the computing time devoted to the oceanic
model and – above all – to the spin-up of the coupled system will inflate
considerably the number of core hours needed. Stochastic physics
parameterisations, especially at lower resolution, seem able to provide an
interesting alternative to tackle such controversy, improving model
performance without increasing the nominal resolution and the overall
computational cost.</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability">

      <p>Post-processed data have been transferred from LRZ to
CINECA via GridFTP, where they have been permanently stored. More importantly,
free data accessibility to the climate user community is granted through a
dedicated THREDDS Web Server hosted by CINECA
(<uri>https://sphinx.hpc.cineca.it/thredds/sphinx.html</uri>), where it is
possible to browse and directly download Climate SPHINX data. Details on
the data accessibility and on the Climate SPHINX project itself are available
on the website of the project
(<uri>http://www.to.isac.cnr.it/sphinx/</uri>).<?xmltex \hack{\break}?> The set-up of this
infrastructure for data sharing has been possible thanks to DATA SPHINX, an
EUDAT data pilot project, which will allow long-term storage and sharing
among a wide scientific user community of high-resolution climate model
output data. DATA SPHINX aims to build a repository serving the climate
change impact modelling community, providing selected variables at high
temporal and spatial resolution, with a focus on climate extremes and the
hydrological cycle in areas with complex orography.</p>
  </notes><notes notes-type="competinginterests">

      <p>The authors declare that they have no conflict of
interest.</p>
  </notes><ack><title>Acknowledgements</title><p>We acknowledge PRACE for awarding us access to resource SuperMUC based in
Germany at the Leibniz Supercomputing Centre of the Bavarian Academy of
Sciences and Humanities (LRZ) and to the Marconi HPC machine at CINECA, Italy. We thank the EUDAT (European Data
Infrastructure) project for awarding us a data pilot project and CINECA for
providing resources and technical assistance for the storage and distribution
of the post-processed model output files. We thank Peter Bechtold and ECMWF
for useful suggestions on the QBO tuning. Paolo Davini acknowledges the
funding from the European Union's Horizon 2020 research and innovation
programme COGNAC under the European Union Marie Skłodowska-Curie grant
agreement no. 654942. Jost von Hardenberg and Paolo Davini acknowledge
support by the Project of Interest NextDATA (MIUR PNR 2011–2013).
Hannah M. Christensen, Stephan Juricke, Aneesh Subramanian,
Peter A. G. Watson and Tim N. Palmer were supported under the European
Research Council grant 291406 PESM. This study was supported by the project
SPECS (grant agreement number 308378) funded by the European Commission
Seventh Framework Research Programme. The authors also acknowledge support by
the PRIMAVERA project, funded by the European Commission under grant
agreement no. 641727 of the Horizon 2020 Research Programme. Jost von Hardenberg acknowledges
support from the European Union's Horizon 2020 research and innovation programme
under grant agreement no. 641816 (CRESCENDO) and thanks ECMWF for providing
computing time in the framework of the special project SPITVONH.<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?> Edited by:
W. Hazeleger<?xmltex \hack{\newline}?> Reviewed by: two anonymous referees</p></ack><ref-list>
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<abstract-html><p class="p">The Climate SPHINX (Stochastic Physics HIgh resolutioN eXperiments) project
is a comprehensive set of ensemble simulations aimed at evaluating the
sensitivity of present and future climate to model resolution and stochastic
parameterisation. The EC-Earth Earth system model is used to explore the
impact of stochastic physics in a large ensemble of 30-year climate
integrations at five different atmospheric horizontal resolutions (from
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historical scenario (1979–2008) and a climate change projection (2039–2068),
together with coupled transient runs (1850–2100). A total of 20.4 million
core hours have been used, made available from a single year grant from PRACE
(the Partnership for Advanced Computing in Europe), and close to 1.5 PB
of output data have been produced on SuperMUC IBM Petascale System at the
Leibniz Supercomputing Centre (LRZ) in Garching, Germany. About 140 TB of
post-processed data are stored on the CINECA supercomputing centre archives
and are freely accessible to the community thanks to an EUDAT data pilot
project. This paper presents the technical and scientific set-up of the
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Euro-Atlantic atmospheric blocking following resolution increase is observed.
It is also shown that including stochastic parameterisation in the low-resolution
runs helps to improve some aspects of the tropical climate –
specifically the Madden–Julian Oscillation and the tropical rainfall
variability. These findings show the importance of representing the impact of
small-scale processes on the large-scale climate variability either
explicitly (with high-resolution simulations) or stochastically (in low-resolution simulations).</p></abstract-html>
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